Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0009776

Physical Location & Seq

Genomic Coordinates Forward (+)

17544291 .. 17549988

Gene Structure 5698 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032668

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGAAGTACGTGTTGGTGACGGGTGGTGTTGTTAGTGGACTCGGCAAAGGAGTCACGGCCAGTAGTATTGGATTGCTTCTTCAAGCTTGTGGCCTTCGTGTTACGTCAATCAAAATTGATCCTTACTTGAACACCGATGCTGGGACAATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTATTAGATGATGGCGGTGAGGTTGACCTTGACCTCGGAAATTATGAGCGGTTTCTGGATGTTACTTTGACCCGCGACAACAATATCACAACTGGAAAAATTTATCAGTCTGTTATTGACAAGGAGAGGAAGGGAGACTATCTTGGAAAGACTGTCCAGGTTGTTCCTCACATTACGGATGCCATCCAAGAGTGGATAGAACGTGTGGCAATGGTACCTGTGGACGGGAAAGAAGGTCCAGCTGATGTATGTGTCATCGAATTGGGTGGAACTATAGGGGATATTGAATCAATGCCCTTTATTGAGGCCCTTGGCCAATTTTCTTATCGTGTTGGTTCCGGAAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTGAATGTTGTCGGTGAGCAGAAAACAAAGCCTACACAGCATAGTGTTCGGGTACTTAGAGGACAGGGTTTGACACCTAATATTCTAGCTTGTAGGAGTACAAAGCCACTTGAGGAGAATGTGAAGGCAAAACTTGCTCAATTTTGCCACGTACCGGCAGAAAATATTGTCACTCTTTATGATGTTCCAAACATCTGGCACATCCCATTGCTTTTAAGAGATCAAAAGGCACATGAAGCAATCTTGAAAGAATTAAACCTTCAGAGGCTTGCTAGAGAGCCAAATTTGAAGGAATGGACAACCAGGACAGAAATTTCCTCAAATTTACATGATTCTGTCAGAATTGCAATGGTTGGAAAATACACCGGTCTTTCAGATGCTTACCTCTCTGTTCTAAAGGCTCTTCTACATGCTTCTGTTGCTTGCCGTCGGAAACTTGTTGTAGATTGGGTTGCAGCAGGTGACCTTGAAGATGTTACTGCTAAAGAGGCTCCTGAGGTTCATAAGGCTGCATGGGATCTTTTGAAGGGTGCTGATGGTGTTCTAGTTCCAGGAGGATTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCGGCAAAGTATGCTCGTGAAAACAAAGTTCCATTCCTGGGCATTTGCCTGGGAATGCAAATTGCTGTTATTGAGTTTGCACGATCTGTTCTTGGTATGCTTGATGCTAACAGCACGGAGTTTGATCCTGAAACTACAAGTCCTTGTGTCATATTTATGCCAGAGGGTTCAAAAACACATATGGGAGGCACTATGCGTCTGGGATCAAGGAGGACCTACTTCACGGTTACTGACTGCAAATCTGCAAAACTGTATGGAGATGTGGCTTTTGTTGATGAACGACATCGACATAGATATGAGGTCAATCCTGATATGATATCGCAATTCGAAAGTGCTGGCTTATCATTTGTTGGCAGAGATGAAACTGGTCGGCGCATGGAGATTATTGAGCTGCCTGCCCATCCGTACTTTGTTGGTGTTCAGTTCCATCCCGAATTTAAGTCAAGGCCAGGCAAACCTTCTGCTCTGTTCTTAGGACTAATAGCAGCATGCAGGCGTTCAGATACAATCCTACAAAATACAATCCTACAAAACAATGGCCATCTGATAAAGCCTGTTGCAAATGGGACTAGTAATGGACACTTCACAATGAAATCCCACCAGAATGGACATGCATTTAAGTCATCAAATGGGTGTCTAAATGGTGTGTTTAGCAATGGTAATGGCGTGCACTTATGGCGTAGCTCTAGAGGACTTGTCTTCAGGACAAAGCTGGATTTTGAAGTTTTGAATGACACAGCGGGTAATTTACAAGAAGATTTGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

638

Amino Acids

69.77

Weight (kDa)

6.59

Isoelectric Point (pI)

38.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	2 - 272	2.6e-123	CTP synthase N-terminus
GATase	PF00117	310 - 543	4.2e-42	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12670
fragaria_vesca	FvH4_3g13560 FvH4_3g13560
malus_domestica	MD10G1220500.v1.1
prunus_persica	Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1
pyrus_communis	pycom05g21760 pycom10g18630
rosa_chinensis	RchiOBHm_Chr5g0022521
rosa_laevigata	RLG00000032668
rosa_multiflora	Rmu_sc0011329.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056530
rosa_rugosa	Rorug05G0074500 Rorug05G0074600
rosa_samantha	Rh5AG161300 Rh5BG160200 Rh5CG174600 Rh5DG160900
rosa_wichuraiana	Rw0G005550 Rw5G014380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1004
Acc36I	ACCTGC	1 cut(s)	1004
Acc65I	GGTACC	1 cut(s)	391
AccB1I	GGYRCC	1 cut(s)	391
AccBSI	CCGCTC	1 cut(s)	226
AccII	CGCG	1 cut(s)	252
AccIII	TCCGGA	1 cut(s)	515
AciI	CCGC	5 cut(s)	192, 226, 250, 1148, 1886
AclWI	GGATC	4 cut(s)	113, 1080, 1265, 1357
AcoI	YGGCCR	3 cut(s)	57, 490, 1684
AcsI	RAATTY	7 cut(s)	276, 520, 838, 867, 877, 1140, 1580
AcuI	CTGAAG	2 cut(s)	800, 1831
AfaI	GTAC	6 cut(s)	8, 393, 609, 655, 708, 1553
AfiI	CCNNNNNNNGG	4 cut(s)	141, 401, 709, 1184
AflIII	ACRYGT	2 cut(s)	9, 379
AgeI	ACCGGT	1 cut(s)	920
AhlI	ACTAGT	1 cut(s)	1715
AjnI	CCWGG	6 cut(s)	333, 857, 1105, 1182, 1194, 1594
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AluBI	AGCT	6 cut(s)	86, 419, 644, 1537, 1830, 1858
AluI	AGCT	6 cut(s)	86, 419, 644, 1537, 1830, 1858
Alw21I	GWGCWC	1 cut(s)	1818
Alw26I	GTCTC	2 cut(s)	156, 306
Alw44I	GTGCAC	1 cut(s)	1814
AlwI	GGATC	4 cut(s)	113, 1080, 1265, 1357
Aor13HI	TCCGGA	1 cut(s)	515
AoxI	GGCC	6 cut(s)	57, 91, 483, 490, 1592, 1684
ApaLI	GTGCAC	1 cut(s)	1814
ApeKI	GCWGC	4 cut(s)	1010, 1064, 1537, 1631
ApoI	RAATTY	7 cut(s)	276, 520, 838, 867, 877, 1140, 1580
AsiGI	ACCGGT	1 cut(s)	920
Asp718I	GGTACC	1 cut(s)	391
AspLEI	GCGC	1 cut(s)	1521
AspS9I	GGNCC	3 cut(s)	413, 484, 1359
AsuHPI	GGTGA	5 cut(s)	28, 206, 581, 1028, 1130
AsuII	TTCGAA	1 cut(s)	1473
AvaII	GGWCC	2 cut(s)	413, 1359
AxyI	CCTNAGG	1 cut(s)	1050
BaeGI	GKGCMC	1 cut(s)	1818
BalI	TGGCCA	2 cut(s)	492, 1686
BanI	GGYRCC	1 cut(s)	391
BauI	CACGAG	1 cut(s)	1161
BbsI	GAAGAC	1 cut(s)	1837
Bbv12I	GWGCWC	1 cut(s)	1818
BbvI	GCAGC	4 cut(s)	1022, 1051, 1524, 1643
BccI	CCATC	6 cut(s)	182, 368, 1085, 1554, 1581, 1695
BceAI	ACGGC	2 cut(s)	72, 966
BcgI	CGANNNNNNTGC	2 cut(s)	584, 618
BciT130I	CCWGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
BcoDI	GTCTC	2 cut(s)	156, 306
BcuI	ACTAGT	1 cut(s)	1715
BfaI	CTAG	5 cut(s)	641, 828, 1100, 1716, 1833
BfmI	CTRYAG	1 cut(s)	450
BfuAI	ACCTGC	1 cut(s)	1004
BisI	GCNGC	5 cut(s)	1011, 1065, 1149, 1538, 1632
BlsI	GCNGC	5 cut(s)	1012, 1066, 1150, 1539, 1633
Bme1390I	CCNGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
Bme18I	GGWCC	2 cut(s)	413, 1359
BmgT120I	GGNCC	3 cut(s)	413, 484, 1359
BmiI	GGNNCC	3 cut(s)	393, 514, 1047
BmrFI	CCNGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
BmsI	GCATC	4 cut(s)	127, 346, 922, 1240
BpiI	GAAGAC	1 cut(s)	1837
Bpu14I	TTCGAA	1 cut(s)	1473
BpuEI	CTTGAG	1 cut(s)	686
BsaAI	YACGTR	2 cut(s)	10, 706
BsaJI	CCNNGG	4 cut(s)	211, 487, 1183, 1195
BsaWI	WCCGGW	2 cut(s)	515, 920
BsaXI	ACNNNNNCTCC	2 cut(s)	136, 166
Bsc4I	CCNNNNNNNGG	4 cut(s)	141, 401, 709, 1184
Bse118I	RCCGGY	2 cut(s)	709, 920
Bse1I	ACTGG	3 cut(s)	60, 274, 1516
Bse21I	CCTNAGG	1 cut(s)	1050
Bse3DI	GCAATG	4 cut(s)	393, 761, 909, 1807
BseAI	TCCGGA	1 cut(s)	515
BseBI	CCWGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
BseDI	CCNNGG	4 cut(s)	211, 487, 1183, 1195
BseGI	GGATG	6 cut(s)	241, 360, 361, 756, 1546, 1573
BseLI	CCNNNNNNNGG	4 cut(s)	141, 401, 709, 1184
BseMI	GCAATG	4 cut(s)	393, 761, 909, 1807
BseMII	CTCAG	1 cut(s)	1041
BseNI	ACTGG	3 cut(s)	60, 274, 1516
BseRI	GAGGAG	2 cut(s)	683, 1140
BseSI	GKGCMC	1 cut(s)	1818
BseXI	GCAGC	4 cut(s)	1022, 1051, 1524, 1643
BseYI	CCCAGC	1 cut(s)	140
Bsh1236I	CGCG	1 cut(s)	252
BshFI	GGCC	6 cut(s)	59, 93, 485, 492, 1594, 1686
BshNI	GGYRCC	1 cut(s)	391
BshTI	ACCGGT	1 cut(s)	920
BsiHKAI	GWGCWC	1 cut(s)	1818
BsiSI	CCGG	3 cut(s)	516, 710, 921
BslFI	GGGAC	2 cut(s)	157, 1726
BslI	CCNNNNNNNGG	4 cut(s)	141, 401, 709, 1184
BsmAI	GTCTC	2 cut(s)	156, 306
BsmFI	GGGAC	2 cut(s)	157, 1726
BsmI	GAATGC	1 cut(s)	1206
BsnI	GGCC	6 cut(s)	59, 93, 485, 492, 1594, 1686
Bsp119I	TTCGAA	1 cut(s)	1473
Bsp1286I	GDGCHC	1 cut(s)	1818
Bsp13I	TCCGGA	1 cut(s)	515
Bsp143I	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
BspACI	CCGC	5 cut(s)	192, 226, 250, 1148, 1886
BspANI	GGCC	6 cut(s)	59, 93, 485, 492, 1594, 1686
BspCNI	CTCAG	1 cut(s)	1042
BspEI	TCCGGA	1 cut(s)	515
BspFNI	CGCG	1 cut(s)	252
BspLI	GGNNCC	3 cut(s)	393, 514, 1047
BspMI	ACCTGC	1 cut(s)	1004
BspPI	GGATC	4 cut(s)	113, 1080, 1265, 1357
BspQI	GCTCTTC	1 cut(s)	963
BspT104I	TTCGAA	1 cut(s)	1473
BspT107I	GGYRCC	1 cut(s)	391
BsrBI	CCGCTC	1 cut(s)	226
BsrDI	GCAATG	4 cut(s)	393, 761, 909, 1807
BsrFI	RCCGGY	2 cut(s)	709, 920
BsrI	ACTGG	3 cut(s)	60, 274, 1516
BssAI	RCCGGY	2 cut(s)	709, 920
BssECI	CCNNGG	4 cut(s)	211, 487, 1183, 1195
BssMI	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
BssSI	CACGAG	1 cut(s)	1161
BssT1I	CCWWGG	1 cut(s)	487
Bst2BI	CACGAG	1 cut(s)	1161
Bst2UI	CCWGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
Bst4CI	ACNGT	3 cut(s)	331, 1372, 1398
Bst6I	CTCTTC	1 cut(s)	963
BstAPI	GCANNNNNTGC	2 cut(s)	689, 1157
BstBAI	YACGTR	2 cut(s)	10, 706
BstBI	TTCGAA	1 cut(s)	1473
BstC8I	GCNNGC	7 cut(s)	825, 979, 1483, 1542, 1636, 1640, 1814
BstDEI	CTNAG	3 cut(s)	611, 1050, 1618
BstEII	GGTNACC	1 cut(s)	1016
BstF5I	GGATG	6 cut(s)	241, 360, 361, 756, 1546, 1573
BstFNI	CGCG	1 cut(s)	252
BstHHI	GCGC	1 cut(s)	1521
BstKTI	GATC	6 cut(s)	121, 778, 1075, 1232, 1273, 1352
BstMAI	GTCTC	2 cut(s)	156, 306
BstMBI	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
BstMWI	GCNNNNNNNGC	7 cut(s)	592, 689, 791, 974, 1043, 1157, 1822
BstNI	CCWGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
BstNSI	RCATGY	3 cut(s)	968, 1638, 1760
BstPI	GGTNACC	1 cut(s)	1016
BstSCI	CCNGG	6 cut(s)	333, 857, 1105, 1182, 1194, 1594
BstSFI	CTRYAG	1 cut(s)	450
BstSLI	GKGCMC	1 cut(s)	1818
BstUI	CGCG	1 cut(s)	252
BstV1I	GCAGC	4 cut(s)	1022, 1051, 1524, 1643
BstV2I	GAAGAC	1 cut(s)	1837
BstX2I	RGATCY	1 cut(s)	1072
BstXI	CCANNNNNNTGG	2 cut(s)	750, 1751
BstYI	RGATCY	1 cut(s)	1072
Bsu36I	CCTNAGG	1 cut(s)	1050
BsuRI	GGCC	6 cut(s)	59, 93, 485, 492, 1594, 1686
BtsCI	GGATG	6 cut(s)	241, 360, 361, 756, 1546, 1573
BveI	ACCTGC	1 cut(s)	1004
Cac8I	GCNNGC	7 cut(s)	825, 979, 1483, 1542, 1636, 1640, 1814
CfoI	GCGC	1 cut(s)	1521
Cfr10I	RCCGGY	2 cut(s)	709, 920
Cfr13I	GGNCC	3 cut(s)	413, 484, 1359
CseI	GACGC	1 cut(s)	1331
Csp6I	GTAC	6 cut(s)	7, 392, 608, 654, 707, 1552
CspAI	ACCGGT	1 cut(s)	920
CviAII	CATG	9 cut(s)	164, 536, 788, 884, 965, 1068, 1522, 1635, 1757
CviQI	GTAC	6 cut(s)	7, 392, 608, 654, 707, 1552
DdeI	CTNAG	3 cut(s)	611, 1050, 1618
DpnI	GATC	6 cut(s)	120, 777, 1074, 1231, 1272, 1351
DpnII	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
EaeI	YGGCCR	3 cut(s)	57, 490, 1684
Eam1104I	CTCTTC	1 cut(s)	963
EarI	CTCTTC	1 cut(s)	963
Eco130I	CCWWGG	1 cut(s)	487
Eco32I	GATATC	1 cut(s)	1464
Eco47I	GGWCC	2 cut(s)	413, 1359
Eco57I	CTGAAG	2 cut(s)	800, 1831
Eco81I	CCTNAGG	1 cut(s)	1050
Eco91I	GGTNACC	1 cut(s)	1016
EcoO109I	RGGNCCY	2 cut(s)	484, 1359
EcoO65I	GGTNACC	1 cut(s)	1016
EcoRII	CCWGG	6 cut(s)	333, 857, 1105, 1182, 1194, 1594
EcoRV	GATATC	1 cut(s)	1464
EcoT14I	CCWWGG	1 cut(s)	487
EcoT22I	ATGCAT	1 cut(s)	1762
ErhI	CCWWGG	1 cut(s)	487
FaeI	CATG	9 cut(s)	167, 539, 791, 887, 968, 1071, 1525, 1638, 1760
FaqI	GGGAC	2 cut(s)	157, 1726
FatI	CATG	9 cut(s)	163, 535, 787, 883, 964, 1067, 1521, 1634, 1756
FauI	CCCGC	2 cut(s)	257, 1879
FauNDI	CATATG	1 cut(s)	1326
Fnu4HI	GCNGC	5 cut(s)	1011, 1065, 1149, 1538, 1632
FokI	GGATG	6 cut(s)	248, 347, 368, 743, 1533, 1560
Fsp4HI	GCNGC	5 cut(s)	1011, 1065, 1149, 1538, 1632
FspBI	CTAG	5 cut(s)	641, 828, 1100, 1716, 1833
GlaI	GCGC	1 cut(s)	1520
GluI	GCNGC	5 cut(s)	1011, 1065, 1149, 1538, 1632
GsaI	CCCAGC	1 cut(s)	144
HaeIII	GGCC	6 cut(s)	59, 93, 485, 492, 1594, 1686
HapII	CCGG	3 cut(s)	516, 710, 921
HgaI	GACGC	1 cut(s)	1331
HhaI	GCGC	1 cut(s)	1521
Hin1II	CATG	9 cut(s)	167, 539, 791, 887, 968, 1071, 1525, 1638, 1760
Hin6I	GCGC	1 cut(s)	1519
HinP1I	GCGC	1 cut(s)	1519
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HindIII	AAGCTT	1 cut(s)	84
HinfI	GANTC	4 cut(s)	39, 51, 464, 887
HpaII	CCGG	3 cut(s)	516, 710, 921
HphI	GGTGA	5 cut(s)	28, 206, 581, 1028, 1130
Hpy166II	GTNNAC	4 cut(s)	38, 202, 400, 1816
Hpy188I	TCNGA	8 cut(s)	215, 558, 819, 896, 931, 987, 1648, 1692
Hpy8I	GTNNAC	4 cut(s)	38, 202, 400, 1816
Hpy99I	CGWCG	1 cut(s)	987
HpyAV	CCTTC	8 cut(s)	104, 301, 404, 673, 824, 838, 1075, 1614
HpyCH4III	ACNGT	3 cut(s)	331, 1372, 1398
HpyCH4IV	ACGT	4 cut(s)	9, 104, 379, 705
HpyF10VI	GCNNNNNNNGC	7 cut(s)	592, 689, 791, 974, 1043, 1157, 1822
HpyF3I	CTNAG	3 cut(s)	611, 1050, 1618
HpySE526I	ACGT	4 cut(s)	9, 104, 379, 705
Hsp92II	CATG	9 cut(s)	167, 539, 791, 887, 968, 1071, 1525, 1638, 1760
HspAI	GCGC	1 cut(s)	1519
Kpn2I	TCCGGA	1 cut(s)	515
KpnI	GGTACC	1 cut(s)	395
Kzo9I	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
LguI	GCTCTTC	1 cut(s)	963
LmnI	GCTCC	1 cut(s)	1051
Lsp1109I	GCAGC	4 cut(s)	1022, 1051, 1524, 1643
LweI	GCATC	4 cut(s)	127, 346, 922, 1240
MaeI	CTAG	5 cut(s)	641, 828, 1100, 1716, 1833
MaeII	ACGT	4 cut(s)	9, 104, 379, 705
MaeIII	GTNAC	8 cut(s)	16, 52, 100, 238, 724, 1016, 1030, 1372
MalI	GATC	6 cut(s)	120, 777, 1074, 1231, 1272, 1351
MbiI	CCGCTC	1 cut(s)	226
MboI	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
MboII	GAAGA	5 cut(s)	71, 950, 1037, 1837, 1913
MflI	RGATCY	1 cut(s)	1072
MhlI	GDGCHC	1 cut(s)	1818
MlsI	TGGCCA	2 cut(s)	492, 1686
MluNI	TGGCCA	2 cut(s)	492, 1686
MlyI	GAGTC	2 cut(s)	33, 60
MmeI	TCCRAC	2 cut(s)	889, 965
Mox20I	TGGCCA	2 cut(s)	492, 1686
Mph1103I	ATGCAT	1 cut(s)	1762
MroI	TCCGGA	1 cut(s)	515
MscI	TGGCCA	2 cut(s)	492, 1686
MseI	TTAA	4 cut(s)	770, 809, 1584, 1764
MslI	CAYNNNNRTG	3 cut(s)	1301, 1440, 1749
Msp20I	TGGCCA	2 cut(s)	492, 1686
MspA1I	CMGCKG	2 cut(s)	419, 1886
MspI	CCGG	3 cut(s)	516, 710, 921
MspR9I	CCNGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
Mva1269I	GAATGC	1 cut(s)	1206
MvaI	CCWGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
MvnI	CGCG	1 cut(s)	252
MwoI	GCNNNNNNNGC	7 cut(s)	592, 689, 791, 974, 1043, 1157, 1822
NdeI	CATATG	1 cut(s)	1326
NdeII	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
NlaIII	CATG	9 cut(s)	167, 539, 791, 887, 968, 1071, 1525, 1638, 1760
NlaIV	GGNNCC	3 cut(s)	393, 514, 1047
NmeAIII	GCCGAG	1 cut(s)	21
NmuCI	GTSAC	4 cut(s)	16, 52, 724, 1016
NsiI	ATGCAT	1 cut(s)	1762
NspI	RCATGY	3 cut(s)	968, 1638, 1760
NspV	TTCGAA	1 cut(s)	1473
PaeI	GCATGC	1 cut(s)	1638
PaqCI	CACCTGC	1 cut(s)	1004
PciSI	GCTCTTC	1 cut(s)	963
PctI	GAATGC	1 cut(s)	1206
PfeI	GAWTC	2 cut(s)	464, 887
PflFI	GACNNNGTC	1 cut(s)	148
PfoI	TCCNGGA	1 cut(s)	1105
PinAI	ACCGGT	1 cut(s)	920
PkrI	GCNGC	5 cut(s)	1012, 1066, 1150, 1539, 1633
PleI	GAGTC	2 cut(s)	33, 59
PpsI	GAGTC	2 cut(s)	33, 59
Ppu21I	YACGTR	2 cut(s)	10, 706
PpuMI	RGGWCCY	1 cut(s)	1359
Psp5II	RGGWCCY	1 cut(s)	1359
Psp6I	CCWGG	6 cut(s)	333, 857, 1105, 1182, 1194, 1594
PspEI	GGTNACC	1 cut(s)	1016
PspFI	CCCAGC	1 cut(s)	140
PspGI	CCWGG	6 cut(s)	333, 857, 1105, 1182, 1194, 1594
PspN4I	GGNNCC	3 cut(s)	393, 514, 1047
PspPI	GGNCC	3 cut(s)	413, 484, 1359
PspPPI	RGGWCCY	1 cut(s)	1359
PsuI	RGATCY	1 cut(s)	1072
PsyI	GACNNNGTC	1 cut(s)	148
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	6 cut(s)	8, 393, 609, 655, 708, 1553
RsaNI	GTAC	6 cut(s)	7, 392, 608, 654, 707, 1552
RseI	CAYNNNNRTG	3 cut(s)	1301, 1440, 1749
SapI	GCTCTTC	1 cut(s)	963
SaqAI	TTAA	4 cut(s)	770, 809, 1584, 1764
SatI	GCNGC	5 cut(s)	1011, 1065, 1149, 1538, 1632
Sau3AI	GATC	6 cut(s)	118, 775, 1072, 1229, 1270, 1349
Sau96I	GGNCC	3 cut(s)	413, 484, 1359
SchI	GAGTC	2 cut(s)	33, 60
ScrFI	CCNGG	6 cut(s)	335, 859, 1107, 1184, 1196, 1596
SduI	GDGCHC	1 cut(s)	1818
SfaNI	GCATC	4 cut(s)	127, 346, 922, 1240
SfcI	CTRYAG	1 cut(s)	450
SfuI	TTCGAA	1 cut(s)	1473
SinI	GGWCC	2 cut(s)	413, 1359
SmiMI	CAYNNNNRTG	3 cut(s)	1301, 1440, 1749
SmlI	CTYRAG	1 cut(s)	665
SmoI	CTYRAG	1 cut(s)	665
SpeI	ACTAGT	1 cut(s)	1715
SphI	GCATGC	1 cut(s)	1638
SsiI	CCGC	5 cut(s)	192, 226, 250, 1148, 1886
SspI	AATATT	2 cut(s)	637, 721
SspMI	CTAG	5 cut(s)	641, 828, 1100, 1716, 1833
StyD4I	CCNGG	6 cut(s)	333, 857, 1105, 1182, 1194, 1594
StyI	CCWWGG	1 cut(s)	487
TaaI	ACNGT	3 cut(s)	331, 1372, 1398
TaiI	ACGT	4 cut(s)	12, 107, 382, 708
TaqI	TCGA	3 cut(s)	435, 1432, 1473
TatI	WGTACW	1 cut(s)	653
TauI	GCSGC	1 cut(s)	1151
TfiI	GAWTC	2 cut(s)	464, 887
Tru1I	TTAA	4 cut(s)	770, 809, 1584, 1764
Tru9I	TTAA	4 cut(s)	770, 809, 1584, 1764
TseFI	GTSAC	4 cut(s)	16, 52, 724, 1016
TseI	GCWGC	4 cut(s)	1010, 1064, 1537, 1631
Tsp45I	GTSAC	4 cut(s)	16, 52, 724, 1016
TspDTI	ATGAA	7 cut(s)	17, 524, 804, 1046, 1437, 1521, 1751
TspGWI	ACGGA	3 cut(s)	368, 1277, 1539
Tth111I	GACNNNGTC	1 cut(s)	148
VneI	GTGCAC	1 cut(s)	1814
VpaK11BI	GGWCC	2 cut(s)	413, 1359
XapI	RAATTY	7 cut(s)	276, 520, 838, 867, 877, 1140, 1580
XbaI	TCTAGA	1 cut(s)	1832
XceI	RCATGY	3 cut(s)	968, 1638, 1760
XspI	CTAG	5 cut(s)	641, 828, 1100, 1716, 1833
Zsp2I	ATGCAT	1 cut(s)	1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.