pycom10g19660

exocyst complex component

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
22694491 .. 22697043
2553 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1500 bp
ATGAAGTCCGGTTTAATATTTGGTGATAATCCTGTTTATACAAACAGAGTAGTCCAATGGGCAGAGTGGGAAATCGAATACTTTGTACGGTTGGTGAAAGAGAATGCATCTTCTGATACAGTGTCTGCTTTACGTGGAGCTAGCATTTGTGTTCAGGCTAGTCTCAACTACTCCTTGACGCTGGAACGACAAGGGCTGAAACTGTCAAAATTGATTTTGGTGCTGTTGCGGCCTTTTATTGAAGAAGTTTTAGAGTTGAACTTTAGACGAGCAAGAAAAGGTGTCCTTGACTTGATAGAAACTGATGAGTGCATGTCATTGTCACCTCGCTTTGCACCTCTGCTGTCTGCATTCACAACGTCATCACATAGCTTGCTTGCTGATAGTGGGATAAGATTTATGTGCATTGTTGAAGATATATTGGAACAGTTGACCCCTTTGACCGTTTTTCATTTTGGTGGAAACATACTGAGTAGGATTGGACAACTTTTTGATAAATACATGGATGCTTTAATTAAAGCCCTACCAGGACCATCTGATGATGACAATCTCACAGAGCTGAAGGAGTTTGTATCTTTTAGAGCTGAAACAGATTCAGAACAGCTTGCCGTTTTGGGAGTTGCATTTACCATCTTGGATGAACTACTGCCAAATGCCGTAATGACCCTCTGGAAGCTGCAGAGTGAAAGTGGGGAACCAAAAAGTGGACTTGCTGAAAATGTCACACCTATTCCAAGCACTTCTACAGAGTTAAAGGATTGGAGGCGCCATCTTCAGCATTCATTTGACAAGCTAAGAGACCATTTTTGTCGGCAATATGTCTTGAGCTTCATTTATTCAAGAGAAGGACAGACACGATTGGATGCCCAAATATATTTAAATGAGAATGGTGATGATTTGTACTTGGACTCAGCCCCTTTGCCATCGCTTCCATTTCAGGCATTATTCGCAAAGCTACAGCAGTTAGCAACGGTGGCTGGAGATGTGTTACTTGGAAAAGAGAAAATACAGAAAATTTTGCTTGCTAGGTTAACAGAGACGGTTGTAATGTGGTTGTCCGATGAACAAGAGTTTTGGGGTGTGTTCGAGGATGATACAGGTCCGCTTCAGCCACTTGGGTTGCAGCAGTTAATTCTCGATATGCACTTCACTGTTGAAATTGCACGTTTTGCGGGTTACCCATCTAGGCATGTACACCAGATCGCGTCAGCCATAATTGCTCGTGCTATCCGGGCTTTTGCTGCTAGAGGCATAGAAGTACAAAGTGCACTACCTGAGGACGAGTGGTTTGTAGAAACTGCAAAGTCAGCAATAAGCAAACTACTTATAGGAGCAGAGTCCGAAATTGATGAAGATAACATTGCTCTTCACGATCACATCGTGTTGGATTCAGATGATTCTGTCTCTTCCCTTTCAAGTGTAGATTCTTCCGAGTCTTTTGCTTCTGCAAGTATGGGTGAACTTGACAGCCCGAACCATTTCGACGATTCGGAGGGTTGA

Protein Analysis

500

Amino Acids

55.71

Weight (kDa)

4.65

Isoelectric Point (pI)

49.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 765
AccB7I CCANNNNNTGG 1 cut(s) 704
AccII CGCG 1 cut(s) 1205
AciI CCGC 3 cut(s) 229, 1103, 1172
AcsI RAATTY 1 cut(s) 1014
AcuI CTGAAG 3 cut(s) 581, 758, 1091
AcyI GRCGYC 1 cut(s) 766
AdeI CACNNNGTG 1 cut(s) 1381
AfaI GTAC 4 cut(s) 87, 902, 1194, 1260
AfiI CCNNNNNNNGG 1 cut(s) 704
AgsI TTSAA 6 cut(s) 242, 259, 413, 840, 1157, 1416
AjnI CCWGG 1 cut(s) 526
AluBI AGCT 9 cut(s) 140, 372, 559, 584, 604, 676, 793, 828, 955
AluI AGCT 9 cut(s) 140, 372, 559, 584, 604, 676, 793, 828, 955
Alw21I GWGCWC 1 cut(s) 1270
Alw26I GTCTC 4 cut(s) 167, 792, 1031, 1408
Alw44I GTGCAC 1 cut(s) 1266
AlwNI CAGNNNCTG 1 cut(s) 125
AoxI GGCC 1 cut(s) 230
ApaLI GTGCAC 1 cut(s) 1266
ApeKI GCWGC 3 cut(s) 676, 1123, 1241
ApoI RAATTY 1 cut(s) 1014
ArsI GACNNNNNNTTYG 2 cut(s) 1271, 1303
Asp700I GAANNNNTTC 1 cut(s) 1478
AspLEI GCGC 1 cut(s) 768
AspS9I GGNCC 2 cut(s) 530, 1100
AsuC2I CCSGG 1 cut(s) 1232
AsuHPI GGTGA 5 cut(s) 35, 106, 315, 902, 1469
AsuNHI GCTAGC 1 cut(s) 140
AvaII GGWCC 2 cut(s) 530, 1100
AxyI CCTNAGG 1 cut(s) 1275
BaeGI GKGCMC 1 cut(s) 1270
BanI GGYRCC 1 cut(s) 765
BauI CACGAG 1 cut(s) 1221
Bbv12I GWGCWC 1 cut(s) 1270
BbvI GCAGC 3 cut(s) 663, 1135, 1228
BccI CCATC 5 cut(s) 541, 638, 777, 931, 1189
BceAI ACGGC 2 cut(s) 593, 641
BcgI CGANNNNNNTGC 2 cut(s) 1421, 1455
BciT130I CCWGG 1 cut(s) 528
BcnI CCSGG 1 cut(s) 1232
BcoDI GTCTC 4 cut(s) 167, 792, 1031, 1408
BfaI CTAG 5 cut(s) 141, 159, 1026, 1185, 1245
BfmI CTRYAG 3 cut(s) 677, 744, 956
BfoI RGCGCY 1 cut(s) 769
BisI GCNGC 4 cut(s) 230, 677, 1124, 1242
BlsI GCNGC 4 cut(s) 231, 678, 1125, 1243
Bme1390I CCNGG 2 cut(s) 528, 1232
Bme18I GGWCC 2 cut(s) 530, 1100
BmgT120I GGNCC 2 cut(s) 530, 1100
BmiI GGNNCC 2 cut(s) 696, 767
BmrFI CCNGG 2 cut(s) 528, 1232
BmsI GCATC 3 cut(s) 116, 496, 853
BmtI GCTAGC 1 cut(s) 144
BpmI CTGGAG 1 cut(s) 999
BpuEI CTTGAG 1 cut(s) 844
BpuMI CCSGG 1 cut(s) 1232
BsaAI YACGTR 1 cut(s) 134
BsaBI GATNNNNATC 1 cut(s) 546
BsaHI GRCGYC 1 cut(s) 766
BsaI GGTCTC 1 cut(s) 792
BsaWI WCCGGW 1 cut(s) 8
Bsc4I CCNNNNNNNGG 1 cut(s) 704
Bse21I CCTNAGG 1 cut(s) 1275
Bse3DI GCAATG 1 cut(s) 1359
Bse8I GATNNNNATC 1 cut(s) 546
BseBI CCWGG 1 cut(s) 528
BseGI GGATG 4 cut(s) 511, 643, 868, 1096
BseJI GATNNNNATC 1 cut(s) 546
BseLI CCNNNNNNNGG 1 cut(s) 704
BseMI GCAATG 1 cut(s) 1359
BseMII CTCAG 3 cut(s) 461, 924, 1266
BseSI GKGCMC 1 cut(s) 1270
BseXI GCAGC 3 cut(s) 663, 1135, 1228
Bsh1236I CGCG 1 cut(s) 1205
BshFI GGCC 1 cut(s) 232
BshNI GGYRCC 1 cut(s) 765
BsiHKAI GWGCWC 1 cut(s) 1270
BsiSI CCGG 2 cut(s) 9, 1231
BslI CCNNNNNNNGG 1 cut(s) 704
BsmAI GTCTC 4 cut(s) 167, 792, 1031, 1408
BsmBI CGTCTC 1 cut(s) 1031
BsmI GAATGC 3 cut(s) 109, 350, 778
BsnI GGCC 1 cut(s) 232
Bso31I GGTCTC 1 cut(s) 792
Bsp1286I GDGCHC 1 cut(s) 1270
Bsp1407I TGTACA 1 cut(s) 1192
Bsp143I GATC 2 cut(s) 1200, 1372
BspACI CCGC 3 cut(s) 229, 1103, 1172
BspANI GGCC 1 cut(s) 232
BspCNI CTCAG 3 cut(s) 462, 923, 1267
BspFNI CGCG 1 cut(s) 1205
BspLI GGNNCC 2 cut(s) 696, 767
BspMAI CTGCAG 1 cut(s) 681
BspOI GCTAGC 1 cut(s) 144
BspQI GCTCTTC 1 cut(s) 1371
BspT107I GGYRCC 1 cut(s) 765
BspTNI GGTCTC 1 cut(s) 792
BsrDI GCAATG 1 cut(s) 1359
BsrGI TGTACA 1 cut(s) 1192
BssMI GATC 2 cut(s) 1200, 1372
BssNI GRCGYC 1 cut(s) 766
BssSI CACGAG 1 cut(s) 1221
Bst2BI CACGAG 1 cut(s) 1221
Bst2UI CCWGG 1 cut(s) 528
Bst4CI ACNGT 8 cut(s) 90, 121, 204, 429, 445, 973, 1042, 1153
Bst6I CTCTTC 2 cut(s) 1371, 1411
BstACI GRCGYC 1 cut(s) 766
BstAPI GCANNNNNTGC 1 cut(s) 1169
BstAUI TGTACA 1 cut(s) 1192
BstBAI YACGTR 1 cut(s) 134
BstC8I GCNNGC 5 cut(s) 142, 374, 378, 606, 1023
BstDEI CTNAG 4 cut(s) 470, 794, 910, 1275
BstEII GGTNACC 1 cut(s) 1175
BstF5I GGATG 4 cut(s) 511, 643, 868, 1096
BstFNI CGCG 1 cut(s) 1205
BstH2I RGCGCY 1 cut(s) 769
BstHHI GCGC 1 cut(s) 768
BstKTI GATC 2 cut(s) 1203, 1375
BstMAI GTCTC 4 cut(s) 167, 792, 1031, 1408
BstMBI GATC 2 cut(s) 1200, 1372
BstMWI GCNNNNNNNGC 8 cut(s) 229, 947, 974, 1169, 1217, 1232, 1241, 1307
BstNI CCWGG 1 cut(s) 528
BstNSI RCATGY 2 cut(s) 316, 1193
BstPI GGTNACC 1 cut(s) 1175
BstSCI CCNGG 2 cut(s) 526, 1230
BstSFI CTRYAG 3 cut(s) 677, 744, 956
BstSLI GKGCMC 1 cut(s) 1270
BstUI CGCG 1 cut(s) 1205
BstV1I GCAGC 3 cut(s) 663, 1135, 1228
Bsu36I CCTNAGG 1 cut(s) 1275
BsuRI GGCC 1 cut(s) 232
BtgZI GCGATG 1 cut(s) 909
BtsCI GGATG 4 cut(s) 511, 643, 868, 1096
BtsIMutI CAGTG 2 cut(s) 126, 1149
Cac8I GCNNGC 5 cut(s) 142, 374, 378, 606, 1023
CaiI CAGNNNCTG 1 cut(s) 125
CfoI GCGC 1 cut(s) 768
Cfr13I GGNCC 2 cut(s) 530, 1100
CseI GACGC 2 cut(s) 187, 1194
Csp6I GTAC 4 cut(s) 86, 901, 1193, 1259
CspCI CAANNNNNGTGG 2 cut(s) 1101, 1136
CviAII CATG 3 cut(s) 313, 502, 1190
CviQI GTAC 4 cut(s) 86, 901, 1193, 1259
DdeI CTNAG 4 cut(s) 470, 794, 910, 1275
DinI GGCGCC 1 cut(s) 767
DpnI GATC 2 cut(s) 1202, 1374
DpnII GATC 2 cut(s) 1200, 1372
DraI TTTAAA 1 cut(s) 879
DraIII CACNNNGTG 1 cut(s) 1381
Eam1104I CTCTTC 2 cut(s) 1371, 1411
EarI CTCTTC 2 cut(s) 1371, 1411
Eco31I GGTCTC 1 cut(s) 792
Eco47I GGWCC 2 cut(s) 530, 1100
Eco57I CTGAAG 3 cut(s) 581, 758, 1091
Eco81I CCTNAGG 1 cut(s) 1275
Eco91I GGTNACC 1 cut(s) 1175
EcoO65I GGTNACC 1 cut(s) 1175
EcoRII CCWGG 1 cut(s) 526
EcoT22I ATGCAT 1 cut(s) 109
EgeI GGCGCC 1 cut(s) 767
EheI GGCGCC 1 cut(s) 767
Esp3I CGTCTC 1 cut(s) 1031
FaeI CATG 3 cut(s) 316, 505, 1193
FalI AAGNNNNNCTT 2 cut(s) 270, 302
FatI CATG 3 cut(s) 312, 501, 1189
FauI CCCGC 1 cut(s) 1165
Fnu4HI GCNGC 4 cut(s) 230, 677, 1124, 1242
FokI GGATG 4 cut(s) 518, 650, 875, 1103
Fsp4HI GCNGC 4 cut(s) 230, 677, 1124, 1242
FspBI CTAG 5 cut(s) 141, 159, 1026, 1185, 1245
GlaI GCGC 1 cut(s) 767
GluI GCNGC 4 cut(s) 230, 677, 1124, 1242
GsuI CTGGAG 1 cut(s) 999
HaeII RGCGCY 1 cut(s) 769
HaeIII GGCC 1 cut(s) 232
HapII CCGG 2 cut(s) 9, 1231
HgaI GACGC 2 cut(s) 187, 1194
HhaI GCGC 1 cut(s) 768
Hin1I GRCGYC 1 cut(s) 766
Hin1II CATG 3 cut(s) 316, 505, 1193
Hin6I GCGC 1 cut(s) 766
HinP1I GCGC 1 cut(s) 766
HincII GTYRAC 2 cut(s) 432, 1032
HindII GTYRAC 2 cut(s) 432, 1032
HinfI GANTC 8 cut(s) 593, 908, 1337, 1388, 1397, 1424, 1433, 1487
HpaI GTTAAC 1 cut(s) 1032
HpaII CCGG 2 cut(s) 9, 1231
HphI GGTGA 5 cut(s) 35, 106, 315, 902, 1469
Hpy166II GTNNAC 6 cut(s) 432, 707, 1032, 1195, 1268, 1460
Hpy188I TCNGA 8 cut(s) 115, 538, 598, 1060, 1342, 1393, 1432, 1492
Hpy188III TCNNGA 5 cut(s) 670, 823, 840, 1136, 1370
Hpy8I GTNNAC 6 cut(s) 432, 707, 1032, 1195, 1268, 1460
Hpy99I CGWCG 1 cut(s) 1487
HpyAV CCTTC 2 cut(s) 556, 839
HpyCH4III ACNGT 8 cut(s) 90, 121, 204, 429, 445, 973, 1042, 1153
HpyCH4IV ACGT 3 cut(s) 133, 359, 1165
HpyF10VI GCNNNNNNNGC 8 cut(s) 229, 947, 974, 1169, 1217, 1232, 1241, 1307
HpyF3I CTNAG 4 cut(s) 470, 794, 910, 1275
HpySE526I ACGT 3 cut(s) 133, 359, 1165
Hsp92I GRCGYC 1 cut(s) 766
Hsp92II CATG 3 cut(s) 316, 505, 1193
HspAI GCGC 1 cut(s) 766
KasI GGCGCC 1 cut(s) 765
KspAI GTTAAC 1 cut(s) 1032
Kzo9I GATC 2 cut(s) 1200, 1372
LguI GCTCTTC 1 cut(s) 1371
LmnI GCTCC 2 cut(s) 137, 1331
Lsp1109I GCAGC 3 cut(s) 663, 1135, 1228
LweI GCATC 3 cut(s) 116, 496, 853
MaeI CTAG 5 cut(s) 141, 159, 1026, 1185, 1245
MaeII ACGT 3 cut(s) 133, 359, 1165
MaeIII GTNAC 4 cut(s) 321, 721, 987, 1175
MalI GATC 2 cut(s) 1202, 1374
MboI GATC 2 cut(s) 1200, 1372
MboII GAAGA 8 cut(s) 102, 254, 425, 764, 1358, 1364, 1398, 1419
MhlI GDGCHC 1 cut(s) 1270
MluCI AATT 7 cut(s) 209, 513, 1014, 1131, 1158, 1215, 1344
Mly113I GGCGCC 1 cut(s) 766
MlyI GAGTC 3 cut(s) 902, 1346, 1442
MmeI TCCRAC 1 cut(s) 1365
MnlI CCTC 8 cut(s) 336, 348, 677, 756, 1081, 1241, 1270, 1486
Mph1103I ATGCAT 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 1478
MseI TTAA 7 cut(s) 14, 512, 516, 752, 878, 1031, 1130
MslI CAYNNNNRTG 1 cut(s) 456
MspI CCGG 2 cut(s) 9, 1231
MspR9I CCNGG 2 cut(s) 528, 1232
Mva1269I GAATGC 3 cut(s) 109, 350, 778
MvaI CCWGG 1 cut(s) 528
MvnI CGCG 1 cut(s) 1205
MwoI GCNNNNNNNGC 8 cut(s) 229, 947, 974, 1169, 1217, 1232, 1241, 1307
NarI GGCGCC 1 cut(s) 766
NciI CCSGG 1 cut(s) 1232
NdeII GATC 2 cut(s) 1200, 1372
NheI GCTAGC 1 cut(s) 140
NlaIII CATG 3 cut(s) 316, 505, 1193
NlaIV GGNNCC 2 cut(s) 696, 767
NmuCI GTSAC 2 cut(s) 321, 721
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 2 cut(s) 316, 1193
PacI TTAATTAA 1 cut(s) 516
PciSI GCTCTTC 1 cut(s) 1371
PcsI WCGNNNNNNNCGW 1 cut(s) 1377
PctI GAATGC 3 cut(s) 109, 350, 778
PdmI GAANNNNTTC 1 cut(s) 1478
PfeI GAWTC 5 cut(s) 593, 1388, 1397, 1424, 1487
PflMI CCANNNNNTGG 1 cut(s) 704
PkrI GCNGC 4 cut(s) 231, 678, 1125, 1243
PleI GAGTC 3 cut(s) 902, 1345, 1441
PluTI GGCGCC 1 cut(s) 769
PpsI GAGTC 3 cut(s) 902, 1345, 1441
Ppu21I YACGTR 1 cut(s) 134
Psp6I CCWGG 1 cut(s) 526
PspEI GGTNACC 1 cut(s) 1175
PspGI CCWGG 1 cut(s) 526
PspN4I GGNNCC 2 cut(s) 696, 767
PspPI GGNCC 2 cut(s) 530, 1100
PstI CTGCAG 1 cut(s) 681
PstNI CAGNNNCTG 1 cut(s) 125
RsaI GTAC 4 cut(s) 87, 902, 1194, 1260
RsaNI GTAC 4 cut(s) 86, 901, 1193, 1259
RseI CAYNNNNRTG 1 cut(s) 456
SapI GCTCTTC 1 cut(s) 1371
SaqAI TTAA 7 cut(s) 14, 512, 516, 752, 878, 1031, 1130
SatI GCNGC 4 cut(s) 230, 677, 1124, 1242
Sau3AI GATC 2 cut(s) 1200, 1372
Sau96I GGNCC 2 cut(s) 530, 1100
SchI GAGTC 3 cut(s) 902, 1346, 1442
ScrFI CCNGG 2 cut(s) 528, 1232
SduI GDGCHC 1 cut(s) 1270
SfaNI GCATC 3 cut(s) 116, 496, 853
SfcI CTRYAG 3 cut(s) 677, 744, 956
SfoI GGCGCC 1 cut(s) 767
SinI GGWCC 2 cut(s) 530, 1100
SmiI ATTTAAAT 1 cut(s) 879
SmiMI CAYNNNNRTG 1 cut(s) 456
SmlI CTYRAG 1 cut(s) 823
SmoI CTYRAG 1 cut(s) 823
Sse9I AATT 7 cut(s) 209, 513, 1014, 1131, 1158, 1215, 1344
SsiI CCGC 3 cut(s) 229, 1103, 1172
SspDI GGCGCC 1 cut(s) 765
SspI AATATT 1 cut(s) 18
SspMI CTAG 5 cut(s) 141, 159, 1026, 1185, 1245
StyD4I CCNGG 2 cut(s) 526, 1230
SwaI ATTTAAAT 1 cut(s) 879
TaaI ACNGT 8 cut(s) 90, 121, 204, 429, 445, 973, 1042, 1153
TaiI ACGT 3 cut(s) 136, 362, 1168
TaqI TCGA 4 cut(s) 75, 1086, 1137, 1482
TasI AATT 7 cut(s) 209, 513, 1014, 1131, 1158, 1215, 1344
TatI WGTACW 3 cut(s) 900, 1192, 1258
TauI GCSGC 1 cut(s) 232
TfiI GAWTC 5 cut(s) 593, 1388, 1397, 1424, 1487
Tru1I TTAA 7 cut(s) 14, 512, 516, 752, 878, 1031, 1130
Tru9I TTAA 7 cut(s) 14, 512, 516, 752, 878, 1031, 1130
TscAI CASTG 2 cut(s) 126, 1156
TseFI GTSAC 2 cut(s) 321, 721
TseI GCWGC 3 cut(s) 676, 1123, 1241
Tsp45I GTSAC 2 cut(s) 321, 721
TspDTI ATGAA 7 cut(s) 17, 440, 654, 771, 820, 1077, 1365
TspRI CASTG 2 cut(s) 126, 1156
Van91I CCANNNNNTGG 1 cut(s) 704
VneI GTGCAC 1 cut(s) 1266
VpaK11BI GGWCC 2 cut(s) 530, 1100
XapI RAATTY 1 cut(s) 1014
XceI RCATGY 2 cut(s) 316, 1193
XmnI GAANNNNTTC 1 cut(s) 1478
XspI CTAG 5 cut(s) 141, 159, 1026, 1185, 1245
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.