pycom10g21020

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0014576
Physical Location & Seq
Reverse (-)
23751468 .. 23753717
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1794 bp
ATGTCATTCCATCTTCATAAGTTTCCTTTGCTCTCAAGAAGTGGGGTTATGGAAAGATTGATTTCCGAAGCATCTGAAGGAGAAGAAGGTTGTGTCATAACCGTCCCTGATATTCCTGGTGGGGTAAAAACATTTGAATTGGTAGCCAAGTTCTGCTATGGGGTGAAATTTGAGCTTACTGCCTCAAATGTTGTCTACCTTCGATGTGCTGCTGAGCATCTTGAAATGACTGAAGAGTACGGGGAGGACAACTTAATCACACAAACTGAAGCCTTTCTCAATCAAGTAGTCCTTCGAAATTGGAAAGACTCTTTAAAGGCGCTTCAGACTTGTGATGATATTCTCCCTTATGCTGAAGAACTCAACATTACCAAAAGGTGCATTGAGTCACTAGCCACAAAAGCATCTACTGATCCTAATTTGTTTGGGTGGCCTGTCAAGGAGCATGGTGGCCCTATGCAAAGTCCTGGTGGGAGTGTCCTGTGGAATGGGATAAGTACAGGGGCTAGACCAAAGAAATCAAGTTCAGATTGGTGGTATGAGGATGCATCAACCTTAAGCTTGCCTCTCTACCAGAGGCTGATTTCGGTCATGGAATCTCGTGGCATCAAACAGGAGATCATTGCAGCCTCAATCACTTATTATGCAAAAAAGTACCTTCCTGGGCTGAATCGGCGTCAAGGCAATGATTCTAGTACTCATCTTAAACCAGTGTCCTTGGGGTCCCCACCATCAGAAGAAGACCAGAAGCTCTTACTTGAAGAGGTTGATCGGTTACTTCCATTTCAGAAGCGTGTAGTCCCAACCAAATTCTTGTTTGGTCTACTTCGAACAGCCATGATTCTTCGAGCCAACCCTTCGTGCATATCAAATTTTGAGAAGAGAATTGGCATGCAGCTTGATCAAGCTACTTTGGAAGATCTTTTGATGCCCAACTTCTCTTATTCTATGGAGACTCTGTACAATGTTGACTGTGTGCAACGAATTCTAGACCACTTCATTGCCATGGAACAAACAGGAGGAGTGTCTCCATGTTCGGTCGATGATGAACAATTGATCGAGTCTTCAGGCCCTTCACTGACCCCAATCACAATGGTAGCCAAACTCATCGATGGATACCTTGCAGAGGTCGCCCCTGATGTCAACTTGAAGCTCCCCAAGTTTCAGGCTCTTGCTGCTGCTGTTCCAGAATATGCCAGACCCTTGGATGATGGTCTTTACCGCGCCATAGATATTTATTTGAAGTCGCACCCATGGTTGGTGGAGTCCGAAAGGGAACAGCTTTGCCGGTTGATGGACTGCCAGAAGCTTTCCTTGGAAGCTTGCACTCATGCTGCACAGAATGAGAGGCTACCCTTGAGAATAGTTGTTCAAGTTCTCTTCTTCGAGCAGCTTCAGCTTAGGTCGTCAATTGCCGACTGCTTTCTGGTATCAGAAAATCTTGATGGGTCAAGGCAGTTAAGAAGTGGGTTTGCTATGTCTAACGAGGGAGGCTGGGCCACTACCGTGAGGGAGAATCAGGTTTTAAAGGTTGGGATGGACAATATGAGGATGCGGGTATCCGAGCTTGAGAAGGAGTGTTCGAACATGAGACAAGAGATCGAGAAGTTGGGTCACGTAAAAGGGTCTAGCACGTGGGGAAACGTATCAAAGAAATTCGGGTTCAAGATAAAGTCCCAGATGTGCAGTGCTCAAGAGGGATCCGTCACCAATCAACACAACGGGAGTGAGAAAGTCGAGAAGCTAAAGGAGAGGCATGGTAAGCATAAGAAAGACTCTGTTAAAGATGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

598

Amino Acids

67.01

Weight (kDa)

5.79

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 177 - 442 6.1e-98 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014576)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30440
fragaria_vesca FvH4_3g09890 FvH4_3g09890
malus_domestica MD05G1275200.v1.1 MD10G1254600.v1.1
prunus_persica Prupe.4G088800_v2.0.a1
pyrus_communis pycom05g25650 pycom10g21020
rosa_chinensis RchiOBHm_Chr5g0015601
rosa_laevigata RLG00000023153 RLG00000032212
rosa_multiflora Rmu_sc0003230.1_g000001
rosa_roxburghii Rroxscaffold_1G00060870
rosa_rugosa Rorug05G0028800 Rorug05G0028800
rosa_samantha Rh5AG122100
rosa_wichuraiana Rw5G010530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 195, 823
AccII CGCG 1 cut(s) 1224
AciI CCGC 2 cut(s) 1222, 1555
AclWI GGATC 3 cut(s) 407, 1695, 1708
AcsI RAATTY 5 cut(s) 167, 809, 871, 984, 1655
AcuI CTGAAG 7 cut(s) 96, 252, 288, 308, 375, 1050, 1379
AcvI CACGTG 1 cut(s) 1635
AcyI GRCGYC 1 cut(s) 676
AfaI GTAC 5 cut(s) 239, 499, 656, 697, 962
AfiI CCNNNNNNNGG 3 cut(s) 1126, 1258, 1294
AflII CTTAAG 1 cut(s) 556
AgsI TTSAA 7 cut(s) 137, 224, 761, 1150, 1243, 1373, 1666
AjnI CCWGG 3 cut(s) 115, 466, 661
AjuI GAANNNNNNNTTGG 2 cut(s) 1298, 1330
AleI CACNNNNGTG 1 cut(s) 1505
Alw21I GWGCWC 1 cut(s) 1693
Alw26I GTCTC 3 cut(s) 947, 1032, 1585
AlwI GGATC 3 cut(s) 407, 1695, 1708
AlwNI CAGNNNCTG 1 cut(s) 580
AoxI GGCC 4 cut(s) 431, 451, 1069, 1497
ApeKI GCWGC 7 cut(s) 209, 626, 895, 1175, 1178, 1334, 1390
ApoI RAATTY 5 cut(s) 167, 809, 871, 984, 1655
Asp700I GAANNNNTTC 1 cut(s) 273
AspLEI GCGC 2 cut(s) 322, 1226
AspS9I GGNCC 4 cut(s) 452, 723, 1070, 1497
AsuHPI GGTGA 2 cut(s) 175, 1699
AsuII TTCGAA 3 cut(s) 295, 829, 1583
AvaII GGWCC 1 cut(s) 723
BamHI GGATCC 1 cut(s) 1700
BauI CACGAG 1 cut(s) 600
BbrPI CACGTG 1 cut(s) 1635
BbsI GAAGAC 2 cut(s) 747, 1056
Bbv12I GWGCWC 1 cut(s) 1693
BbvI GCAGC 7 cut(s) 196, 638, 907, 1162, 1165, 1321, 1402
BccI CCATC 7 cut(s) 18, 739, 1106, 1205, 1288, 1439, 1531
BciT130I CCWGG 3 cut(s) 117, 468, 663
BciVI GTATCC 2 cut(s) 1109, 1570
BclI TGATCA 1 cut(s) 901
BcoDI GTCTC 3 cut(s) 947, 1032, 1585
BfaI CTAG 5 cut(s) 392, 507, 693, 989, 1629
BfoI RGCGCY 1 cut(s) 323
BfrI CTTAAG 1 cut(s) 556
BfuI GTATCC 2 cut(s) 1109, 1570
BglII AGATCT 1 cut(s) 919
BisI GCNGC 7 cut(s) 210, 627, 896, 1176, 1179, 1335, 1391
BlpI GCTNAGC 1 cut(s) 213
BlsI GCNGC 7 cut(s) 211, 628, 897, 1177, 1180, 1336, 1392
BmcAI AGTACT 1 cut(s) 697
Bme1390I CCNGG 3 cut(s) 117, 468, 663
Bme18I GGWCC 1 cut(s) 723
BmgT120I GGNCC 4 cut(s) 452, 723, 1070, 1497
BmiI GGNNCC 3 cut(s) 724, 725, 1702
BmrFI CCNGG 3 cut(s) 117, 468, 663
BmsI GCATC 8 cut(s) 80, 226, 413, 535, 557, 615, 918, 1542
BpiI GAAGAC 2 cut(s) 747, 1056
Bpu10I CCTNAGC 1 cut(s) 1400
Bpu1102I GCTNAGC 1 cut(s) 213
Bpu14I TTCGAA 3 cut(s) 295, 829, 1583
BpuEI CTTGAG 4 cut(s) 19, 1378, 1589, 1677
Bsa29I ATCGAT 1 cut(s) 1110
BsaAI YACGTR 2 cut(s) 1618, 1635
BsaHI GRCGYC 1 cut(s) 676
BsaJI CCNNGG 6 cut(s) 662, 717, 1005, 1203, 1253, 1314
BsaXI ACNNNNNCTCC 2 cut(s) 944, 974
Bsc4I CCNNNNNNNGG 3 cut(s) 1126, 1258, 1294
Bse118I RCCGGY 1 cut(s) 1287
Bse1I ACTGG 1 cut(s) 710
Bse3DI GCAATG 3 cut(s) 621, 691, 999
BseBI CCWGG 3 cut(s) 117, 468, 663
BseCI ATCGAT 1 cut(s) 1110
BseDI CCNNGG 6 cut(s) 662, 717, 1005, 1203, 1253, 1314
BseGI GGATG 4 cut(s) 550, 1213, 1542, 1557
BseLI CCNNNNNNNGG 3 cut(s) 1126, 1258, 1294
BseMI GCAATG 3 cut(s) 621, 691, 999
BseMII CTCAG 1 cut(s) 204
BseNI ACTGG 1 cut(s) 710
BseRI GAGGAG 1 cut(s) 1035
BseXI GCAGC 7 cut(s) 196, 638, 907, 1162, 1165, 1321, 1402
BseYI CCCAGC 1 cut(s) 1494
BsgI GTGCAG 2 cut(s) 1320, 1705
Bsh1236I CGCG 1 cut(s) 1224
Bsh1285I CGRYCG 1 cut(s) 1041
BshFI GGCC 4 cut(s) 433, 453, 1071, 1499
BshVI ATCGAT 1 cut(s) 1110
BsiEI CGRYCG 1 cut(s) 1041
BsiHKAI GWGCWC 1 cut(s) 1693
BsiSI CCGG 1 cut(s) 1288
BslFI GGGAC 4 cut(s) 89, 709, 785, 1660
BslI CCNNNNNNNGG 3 cut(s) 1126, 1258, 1294
BsmAI GTCTC 3 cut(s) 947, 1032, 1585
BsmFI GGGAC 4 cut(s) 89, 709, 785, 1660
BsnI GGCC 4 cut(s) 433, 453, 1071, 1499
Bsp119I TTCGAA 3 cut(s) 295, 829, 1583
Bsp1286I GDGCHC 1 cut(s) 1693
Bsp1407I TGTACA 1 cut(s) 960
Bsp143I GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
Bsp1720I GCTNAGC 1 cut(s) 213
Bsp19I CCATGG 2 cut(s) 1005, 1253
BspACI CCGC 2 cut(s) 1222, 1555
BspANI GGCC 4 cut(s) 433, 453, 1071, 1499
BspCNI CTCAG 1 cut(s) 205
BspDI ATCGAT 1 cut(s) 1110
BspFNI CGCG 1 cut(s) 1224
BspLI GGNNCC 3 cut(s) 724, 725, 1702
BspPI GGATC 3 cut(s) 407, 1695, 1708
BspT104I TTCGAA 3 cut(s) 295, 829, 1583
BspTI CTTAAG 1 cut(s) 556
BsrDI GCAATG 3 cut(s) 621, 691, 999
BsrFI RCCGGY 1 cut(s) 1287
BsrGI TGTACA 1 cut(s) 960
BsrI ACTGG 1 cut(s) 710
BssAI RCCGGY 1 cut(s) 1287
BssECI CCNNGG 6 cut(s) 662, 717, 1005, 1203, 1253, 1314
BssMI GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
BssNI GRCGYC 1 cut(s) 676
BssSI CACGAG 1 cut(s) 600
BssT1I CCWWGG 5 cut(s) 717, 1005, 1203, 1253, 1314
Bst2BI CACGAG 1 cut(s) 600
Bst2UI CCWGG 3 cut(s) 117, 468, 663
Bst4CI ACNGT 3 cut(s) 103, 974, 1507
Bst6I CTCTTC 4 cut(s) 228, 756, 875, 1385
BstACI GRCGYC 1 cut(s) 676
BstAFI CTTAAG 1 cut(s) 556
BstAUI TGTACA 1 cut(s) 960
BstBAI YACGTR 2 cut(s) 1618, 1635
BstBI TTCGAA 3 cut(s) 295, 829, 1583
BstC8I GCNNGC 3 cut(s) 563, 893, 1324
BstDEI CTNAG 2 cut(s) 213, 1400
BstDSI CCRYGG 2 cut(s) 1005, 1253
BstENI CCTNNNNNAGG 1 cut(s) 1124
BstF5I GGATG 4 cut(s) 550, 1213, 1542, 1557
BstFNI CGCG 1 cut(s) 1224
BstH2I RGCGCY 1 cut(s) 323
BstHHI GCGC 2 cut(s) 322, 1226
BstKTI GATC 8 cut(s) 415, 621, 772, 904, 922, 1059, 1602, 1703
BstMAI GTCTC 3 cut(s) 947, 1032, 1585
BstMBI GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
BstMCI CGRYCG 1 cut(s) 1041
BstMWI GCNNNNNNNGC 6 cut(s) 401, 673, 1130, 1175, 1396, 1762
BstNI CCWGG 3 cut(s) 117, 468, 663
BstNSI RCATGY 1 cut(s) 895
BstSCI CCNGG 3 cut(s) 115, 466, 661
BstUI CGCG 1 cut(s) 1224
BstV1I GCAGC 7 cut(s) 196, 638, 907, 1162, 1165, 1321, 1402
BstV2I GAAGAC 2 cut(s) 747, 1056
BstX2I RGATCY 2 cut(s) 919, 1700
BstXI CCANNNNNNTGG 1 cut(s) 1204
BstYI RGATCY 2 cut(s) 919, 1700
Bsu15I ATCGAT 1 cut(s) 1110
BsuI GTATCC 2 cut(s) 1109, 1570
BsuRI GGCC 4 cut(s) 433, 453, 1071, 1499
BsuTUI ATCGAT 1 cut(s) 1110
BtgI CCRYGG 2 cut(s) 1005, 1253
BtsCI GGATG 4 cut(s) 550, 1213, 1542, 1557
BtsI GCAGTG 1 cut(s) 1693
BtsIMutI CAGTG 3 cut(s) 717, 1076, 1693
Cac8I GCNNGC 3 cut(s) 563, 893, 1324
CaiI CAGNNNCTG 1 cut(s) 580
CfoI GCGC 2 cut(s) 322, 1226
Cfr10I RCCGGY 1 cut(s) 1287
Cfr13I GGNCC 4 cut(s) 452, 723, 1070, 1497
ClaI ATCGAT 1 cut(s) 1110
CseI GACGC 1 cut(s) 665
Csp6I GTAC 5 cut(s) 238, 498, 655, 696, 961
CviQI GTAC 5 cut(s) 238, 498, 655, 696, 961
DdeI CTNAG 2 cut(s) 213, 1400
DpnI GATC 8 cut(s) 414, 620, 771, 903, 921, 1058, 1601, 1702
DpnII GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
DraI TTTAAA 2 cut(s) 315, 1527
Eam1104I CTCTTC 4 cut(s) 228, 756, 875, 1385
EarI CTCTTC 4 cut(s) 228, 756, 875, 1385
Eco130I CCWWGG 5 cut(s) 717, 1005, 1203, 1253, 1314
Eco47I GGWCC 1 cut(s) 723
Eco57I CTGAAG 7 cut(s) 96, 252, 288, 308, 375, 1050, 1379
Eco72I CACGTG 1 cut(s) 1635
EcoNI CCTNNNNNAGG 1 cut(s) 1124
EcoO109I RGGNCCY 2 cut(s) 723, 1070
EcoRI GAATTC 1 cut(s) 984
EcoRII CCWGG 3 cut(s) 115, 466, 661
EcoT14I CCWWGG 5 cut(s) 717, 1005, 1203, 1253, 1314
EcoT22I ATGCAT 1 cut(s) 550
ErhI CCWWGG 5 cut(s) 717, 1005, 1203, 1253, 1314
FalI AAGNNNNNCTT 4 cut(s) 276, 308, 1298, 1330
FaqI GGGAC 4 cut(s) 89, 709, 785, 1660
FauI CCCGC 1 cut(s) 1548
FbaI TGATCA 1 cut(s) 901
FblI GTMKAC 2 cut(s) 195, 823
Fnu4HI GCNGC 7 cut(s) 210, 627, 896, 1176, 1179, 1335, 1391
FokI GGATG 4 cut(s) 557, 1220, 1549, 1564
Fsp4HI GCNGC 7 cut(s) 210, 627, 896, 1176, 1179, 1335, 1391
FspBI CTAG 5 cut(s) 392, 507, 693, 989, 1629
GlaI GCGC 2 cut(s) 321, 1225
GluI GCNGC 7 cut(s) 210, 627, 896, 1176, 1179, 1335, 1391
GsaI CCCAGC 1 cut(s) 1498
HaeII RGCGCY 1 cut(s) 323
HaeIII GGCC 4 cut(s) 433, 453, 1071, 1499
HapII CCGG 1 cut(s) 1288
HgaI GACGC 1 cut(s) 665
HhaI GCGC 2 cut(s) 322, 1226
Hin1I GRCGYC 1 cut(s) 676
Hin6I GCGC 2 cut(s) 320, 1224
HinP1I GCGC 2 cut(s) 320, 1224
HincII GTYRAC 2 cut(s) 970, 1144
HindII GTYRAC 2 cut(s) 970, 1144
HindIII AAGCTT 3 cut(s) 559, 1307, 1320
HpaII CCGG 1 cut(s) 1288
HphI GGTGA 2 cut(s) 175, 1699
Hpy166II GTNNAC 4 cut(s) 196, 824, 970, 1144
Hpy188I TCNGA 9 cut(s) 67, 76, 327, 529, 736, 789, 1270, 1435, 1564
Hpy188III TCNNGA 9 cut(s) 36, 221, 989, 1187, 1442, 1603, 1666, 1694, 1738
Hpy8I GTNNAC 4 cut(s) 196, 824, 970, 1144
HpyAV CCTTC 8 cut(s) 71, 80, 209, 302, 668, 867, 1083, 1567
HpyCH4III ACNGT 3 cut(s) 103, 974, 1507
HpyCH4IV ACGT 3 cut(s) 1617, 1634, 1644
HpyF10VI GCNNNNNNNGC 6 cut(s) 401, 673, 1130, 1175, 1396, 1762
HpyF3I CTNAG 2 cut(s) 213, 1400
HpySE526I ACGT 3 cut(s) 1617, 1634, 1644
Hsp92I GRCGYC 1 cut(s) 676
HspAI GCGC 2 cut(s) 320, 1224
KflI GGGWCCC 1 cut(s) 723
Ksp22I TGATCA 1 cut(s) 901
Kzo9I GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
LmnI GCTCC 2 cut(s) 442, 1158
Lsp1109I GCAGC 7 cut(s) 196, 638, 907, 1162, 1165, 1321, 1402
LweI GCATC 8 cut(s) 80, 226, 413, 535, 557, 615, 918, 1542
MaeI CTAG 5 cut(s) 392, 507, 693, 989, 1629
MaeII ACGT 3 cut(s) 1617, 1634, 1644
MaeIII GTNAC 4 cut(s) 387, 774, 1613, 1705
MalI GATC 8 cut(s) 414, 620, 771, 903, 921, 1058, 1601, 1702
MboI GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
MfeI CAATTG 2 cut(s) 1052, 1410
MflI RGATCY 2 cut(s) 919, 1700
MhlI GDGCHC 1 cut(s) 1693
MlyI GAGTC 6 cut(s) 302, 395, 949, 1070, 1274, 1769
Mph1103I ATGCAT 1 cut(s) 550
MroXI GAANNNNTTC 1 cut(s) 273
MseI TTAA 7 cut(s) 254, 314, 557, 705, 1460, 1526, 1782
MslI CAYNNNNRTG 2 cut(s) 1004, 1505
MspCI CTTAAG 1 cut(s) 556
MspI CCGG 1 cut(s) 1288
MspR9I CCNGG 3 cut(s) 117, 468, 663
MunI CAATTG 2 cut(s) 1052, 1410
MvaI CCWGG 3 cut(s) 117, 468, 663
MvnI CGCG 1 cut(s) 1224
MwoI GCNNNNNNNGC 6 cut(s) 401, 673, 1130, 1175, 1396, 1762
NcoI CCATGG 2 cut(s) 1005, 1253
NdeII GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
NlaIV GGNNCC 3 cut(s) 724, 725, 1702
NmuCI GTSAC 3 cut(s) 387, 1613, 1705
NsiI ATGCAT 1 cut(s) 550
NspI RCATGY 1 cut(s) 895
NspV TTCGAA 3 cut(s) 295, 829, 1583
OliI CACNNNNGTG 1 cut(s) 1505
PaeI GCATGC 1 cut(s) 895
PdmI GAANNNNTTC 1 cut(s) 273
PfeI GAWTC 5 cut(s) 596, 670, 689, 841, 1516
PkrI GCNGC 7 cut(s) 211, 628, 897, 1177, 1180, 1336, 1392
PleI GAGTC 6 cut(s) 302, 394, 949, 1069, 1273, 1769
PmaCI CACGTG 1 cut(s) 1635
PmlI CACGTG 1 cut(s) 1635
PpsI GAGTC 6 cut(s) 302, 394, 949, 1069, 1273, 1769
Ppu21I YACGTR 2 cut(s) 1618, 1635
PpuMI RGGWCCY 1 cut(s) 723
Psp5II RGGWCCY 1 cut(s) 723
Psp6I CCWGG 3 cut(s) 115, 466, 661
PspCI CACGTG 1 cut(s) 1635
PspFI CCCAGC 1 cut(s) 1494
PspGI CCWGG 3 cut(s) 115, 466, 661
PspN4I GGNNCC 3 cut(s) 724, 725, 1702
PspPI GGNCC 4 cut(s) 452, 723, 1070, 1497
PspPPI RGGWCCY 1 cut(s) 723
PstNI CAGNNNCTG 1 cut(s) 580
PsuI RGATCY 2 cut(s) 919, 1700
RsaI GTAC 5 cut(s) 239, 499, 656, 697, 962
RsaNI GTAC 5 cut(s) 238, 498, 655, 696, 961
RseI CAYNNNNRTG 2 cut(s) 1004, 1505
SaqAI TTAA 7 cut(s) 254, 314, 557, 705, 1460, 1526, 1782
SatI GCNGC 7 cut(s) 210, 627, 896, 1176, 1179, 1335, 1391
Sau3AI GATC 8 cut(s) 412, 618, 769, 901, 919, 1056, 1599, 1700
Sau96I GGNCC 4 cut(s) 452, 723, 1070, 1497
ScaI AGTACT 1 cut(s) 697
SchI GAGTC 6 cut(s) 302, 395, 949, 1070, 1274, 1769
ScrFI CCNGG 3 cut(s) 117, 468, 663
SduI GDGCHC 1 cut(s) 1693
SfaNI GCATC 8 cut(s) 80, 226, 413, 535, 557, 615, 918, 1542
SfuI TTCGAA 3 cut(s) 295, 829, 1583
SinI GGWCC 1 cut(s) 723
SmiMI CAYNNNNRTG 2 cut(s) 1004, 1505
SmlI CTYRAG 5 cut(s) 34, 556, 1357, 1568, 1692
SmoI CTYRAG 5 cut(s) 34, 556, 1357, 1568, 1692
SphI GCATGC 1 cut(s) 895
SsiI CCGC 2 cut(s) 1222, 1555
SspMI CTAG 5 cut(s) 392, 507, 693, 989, 1629
StyD4I CCNGG 3 cut(s) 115, 466, 661
StyI CCWWGG 5 cut(s) 717, 1005, 1203, 1253, 1314
TaaI ACNGT 3 cut(s) 103, 974, 1507
TaiI ACGT 3 cut(s) 1620, 1637, 1647
TaqII GACCGA 2 cut(s) 577, 1027
TatI WGTACW 3 cut(s) 497, 695, 960
TfiI GAWTC 5 cut(s) 596, 670, 689, 841, 1516
Tru1I TTAA 7 cut(s) 254, 314, 557, 705, 1460, 1526, 1782
Tru9I TTAA 7 cut(s) 254, 314, 557, 705, 1460, 1526, 1782
TscAI CASTG 3 cut(s) 717, 1083, 1693
TseFI GTSAC 3 cut(s) 387, 1613, 1705
TseI GCWGC 7 cut(s) 209, 626, 895, 1175, 1178, 1334, 1390
Tsp45I GTSAC 3 cut(s) 387, 1613, 1705
TspDTI ATGAA 3 cut(s) 5, 988, 1062
TspGWI ACGGA 1 cut(s) 1693
TspRI CASTG 3 cut(s) 717, 1083, 1693
Vha464I CTTAAG 1 cut(s) 556
VpaK11BI GGWCC 1 cut(s) 723
XagI CCTNNNNNAGG 1 cut(s) 1124
XapI RAATTY 5 cut(s) 167, 809, 871, 984, 1655
XbaI TCTAGA 1 cut(s) 988
XceI RCATGY 1 cut(s) 895
XmiI GTMKAC 2 cut(s) 195, 823
XmnI GAANNNNTTC 1 cut(s) 273
XspI CTAG 5 cut(s) 392, 507, 693, 989, 1629
ZrmI AGTACT 1 cut(s) 697
Zsp2I ATGCAT 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.