pycom10g23690

Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
25767232 .. 25769009
1778 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g23690.2

Sequence Viewer

Length: 1266 bp
ATGGCGTCCGTACTCGGAAGTTGCTCGACGGCAGCAACTTTGGCCTCCCGACCTCTGTCCTCTCGCACTTACAGGACTTCAATTCCCTCTCTCTCTCTAACCCCAGGGAAGAGTTTTGGGAGGAAGTTTTATGGAGGGATTGGGATTCATGGAAAGAAGAGGTCTCAATTCCATGTGACCAATGTTGCCACTGAAATCAGCCCTTCTGAGCAGGCAAAGAGGGTTGCTGCTAAGGAAAACCAGAGGCCGGTATATCCATTCGCCGCTATTGTAGGACAAGATGAGATGAAACTGTGCCTTCTGCTGAATGTGATTGATCCCAAGATTGGGGGTGTCATGATCATGGGGGATAGAGGAACTGGAAAATCCACAACTGTTAGGTCCTTGGTTGATTTGCTTCCCGAAATTAAGGTAGTTTCTGGTGACCCTTACAACTCGGATCCAGAAGATCCAGAGTCCATGGGAGCGGAAGTTAGAGAGAGCATTGTGAAAGGGGAGCAACTTCCTGTTATCAAGACTAAGATCAACATGGTTGATTTGCCCTTGGGTGCTACGGAAGATAGAGTCTGTGGAACAATTGATATTGAGAAAGCTCTAACCGAGGGTGTCAAGGCATTTGAGCCTGGCCTTCTAGCAAAAGCTAACAGAGGAATTCTTTATGTGGACGAAGTTAATCTCTTGGATGATCATTTAGTTGATGTCCTATTGGATTCTGCTGCCTCTGGATGGAACACAGTGGAGAGAGAGGGTATCTCAATTTCACATCCTGCTCGGTTTATTTTGATTGGCTCGGGCAATCCAGAAGAAGGGGAGCTCAGGCCACAGTTGCTTGACCGTTTTGGGATGCACGCACAGGTTGGAACTGTGAGGGATGCAGAGCTCAGAGTGAAGATTGTGGAGGAGAGAGCTCGATTTGACAAAAATCCCAAAGAATTTCGGGTTTCTTACGAAGCTGAGCAAGAAAAACTTCAGGAACAAATTGGCGCAGCTAGAAGTTATCTTCCATCTGTTCAGATTGATCAGGACCTCAAGGTGAAAATCTCCAAGGTTTGTGCAGAGTTGAATGTCGATGGATTGAGAGGAGACATAGTGACAAACAGGGCTGCAAAAGCCTTGGCTGCTCTTAAGGGAAGGGATAAGGTGACTCCAGAGGATATTGCTACTGTCATCCCTAACTGCTTAAGACATCGTCTTCGGAAGGATCCTTTAGAGTCGATTGACTCTGGTTTACTTGTCATTGAGAAGTTCTATGAGGTTTTTAGCTGA

Protein Analysis

422

Amino Acids

46.01

Weight (kDa)

6.18

Isoelectric Point (pI)

36.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 467
AciI CCGC 2 cut(s) 264, 467
AclWI GGATC 6 cut(s) 311, 434, 443, 447, 1196, 1209
AcsI RAATTY 2 cut(s) 651, 932
AcuI CTGAAG 1 cut(s) 953
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 12
AfiI CCNNNNNNNGG 5 cut(s) 247, 326, 327, 726, 806
AflII CTTAAG 2 cut(s) 1124, 1180
AgsI TTSAA 2 cut(s) 81, 1063
AjnI CCWGG 2 cut(s) 103, 622
AluBI AGCT 8 cut(s) 593, 641, 814, 880, 908, 953, 989, 1263
AluI AGCT 8 cut(s) 593, 641, 814, 880, 908, 953, 989, 1263
Alw21I GWGCWC 3 cut(s) 816, 882, 910
Alw26I GTCTC 2 cut(s) 168, 1077
AlwI GGATC 6 cut(s) 311, 434, 443, 447, 1196, 1209
Ama87I CYCGRG 1 cut(s) 790
AoxI GGCC 4 cut(s) 42, 245, 625, 818
ApeKI GCWGC 6 cut(s) 32, 227, 716, 986, 1103, 1118
ApoI RAATTY 2 cut(s) 651, 932
ArsI GACNNNNNNTTYG 2 cut(s) 1176, 1208
Asp700I GAANNNNTTC 1 cut(s) 966
AspLEI GCGC 1 cut(s) 986
AspS9I GGNCC 2 cut(s) 381, 1024
AsuHPI GGTGA 3 cut(s) 434, 1045, 1153
AvaI CYCGRG 1 cut(s) 790
AvaII GGWCC 2 cut(s) 381, 1024
BamHI GGATCC 2 cut(s) 439, 1201
BanII GRGCYC 3 cut(s) 816, 882, 910
BbsI GAAGAC 1 cut(s) 1184
Bbv12I GWGCWC 3 cut(s) 816, 882, 910
BbvI GCAGC 6 cut(s) 44, 214, 703, 998, 1090, 1105
BccI CCATC 3 cut(s) 720, 1012, 1064
BceAI ACGGC 1 cut(s) 45
BciT130I CCWGG 2 cut(s) 105, 624
BclI TGATCA 3 cut(s) 339, 685, 1018
BcoDI GTCTC 2 cut(s) 168, 1077
BfaI CTAG 2 cut(s) 632, 990
BfrI CTTAAG 2 cut(s) 1124, 1180
BisI GCNGC 7 cut(s) 33, 228, 264, 717, 987, 1104, 1119
BlpI GCTNAGC 1 cut(s) 954
BlsI GCNGC 7 cut(s) 34, 229, 265, 718, 988, 1105, 1120
Bme1390I CCNGG 2 cut(s) 105, 624
Bme18I GGWCC 2 cut(s) 381, 1024
BmeT110I CYCGRG 1 cut(s) 790
BmgT120I GGNCC 2 cut(s) 381, 1024
BmiI GGNNCC 2 cut(s) 441, 1203
BmrFI CCNGG 2 cut(s) 105, 624
BmsI GCATC 2 cut(s) 834, 862
BoxI GACNNNNGTC 1 cut(s) 55
BpiI GAAGAC 1 cut(s) 1184
BplI GAGNNNNNCTC 2 cut(s) 737, 769
BpmI CTGGAG 1 cut(s) 1131
Bpu10I CCTNAGC 2 cut(s) 231, 815
Bpu1102I GCTNAGC 1 cut(s) 954
BpuEI CTTGAG 1 cut(s) 1013
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 168
BsaJI CCNNGG 8 cut(s) 103, 104, 384, 459, 543, 600, 1044, 1113
BsaXI ACNNNNNCTCC 4 cut(s) 456, 486, 1074, 1104
Bsc4I CCNNNNNNNGG 5 cut(s) 247, 326, 327, 726, 806
Bse118I RCCGGY 1 cut(s) 247
Bse1I ACTGG 1 cut(s) 364
BseBI CCWGG 2 cut(s) 105, 624
BseDI CCNNGG 8 cut(s) 103, 104, 384, 459, 543, 600, 1044, 1113
BseGI GGATG 6 cut(s) 688, 731, 763, 849, 877, 1167
BseLI CCNNNNNNNGG 5 cut(s) 247, 326, 327, 726, 806
BseMII CTCAG 4 cut(s) 198, 829, 895, 945
BseNI ACTGG 1 cut(s) 364
BseRI GAGGAG 2 cut(s) 914, 1095
BseXI GCAGC 6 cut(s) 44, 214, 703, 998, 1090, 1105
BsgI GTGCAG 1 cut(s) 1074
BshFI GGCC 4 cut(s) 44, 247, 627, 820
BsiHKAI GWGCWC 3 cut(s) 816, 882, 910
BsiHKCI CYCGRG 1 cut(s) 790
BsiSI CCGG 1 cut(s) 248
BslI CCNNNNNNNGG 5 cut(s) 247, 326, 327, 726, 806
BsmAI GTCTC 2 cut(s) 168, 1077
BsnI GGCC 4 cut(s) 44, 247, 627, 820
Bso31I GGTCTC 1 cut(s) 168
BsoBI CYCGRG 1 cut(s) 790
Bsp1286I GDGCHC 3 cut(s) 816, 882, 910
Bsp143I GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
Bsp1720I GCTNAGC 1 cut(s) 954
Bsp19I CCATGG 1 cut(s) 459
BspACI CCGC 2 cut(s) 264, 467
BspANI GGCC 4 cut(s) 44, 247, 627, 820
BspCNI CTCAG 4 cut(s) 199, 828, 894, 946
BspHI TCATGA 1 cut(s) 336
BspLI GGNNCC 2 cut(s) 441, 1203
BspPI GGATC 6 cut(s) 311, 434, 443, 447, 1196, 1209
BspTI CTTAAG 2 cut(s) 1124, 1180
BspTNI GGTCTC 1 cut(s) 168
BsrBI CCGCTC 1 cut(s) 467
BsrFI RCCGGY 1 cut(s) 247
BsrI ACTGG 1 cut(s) 364
BssAI RCCGGY 1 cut(s) 247
BssECI CCNNGG 8 cut(s) 103, 104, 384, 459, 543, 600, 1044, 1113
BssMI GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 5 cut(s) 384, 459, 543, 1044, 1113
Bst2UI CCWGG 2 cut(s) 105, 624
Bst4CI ACNGT 7 cut(s) 294, 376, 736, 825, 836, 865, 1165
Bst6I CTCTTC 2 cut(s) 104, 152
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 2 cut(s) 1124, 1180
BstC8I GCNNGC 2 cut(s) 213, 849
BstDEI CTNAG 6 cut(s) 207, 231, 519, 815, 881, 954
BstDSI CCRYGG 1 cut(s) 459
BstEII GGTNACC 1 cut(s) 422
BstF5I GGATG 6 cut(s) 688, 731, 763, 849, 877, 1167
BstHHI GCGC 1 cut(s) 986
BstKTI GATC 8 cut(s) 319, 342, 442, 451, 525, 688, 1021, 1204
BstMAI GTCTC 2 cut(s) 168, 1077
BstMBI GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
BstMWI GCNNNNNNNGC 4 cut(s) 41, 826, 1109, 1118
BstNI CCWGG 2 cut(s) 105, 624
BstPAI GACNNNNGTC 1 cut(s) 55
BstPI GGTNACC 1 cut(s) 422
BstSCI CCNGG 2 cut(s) 103, 622
BstV1I GCAGC 6 cut(s) 44, 214, 703, 998, 1090, 1105
BstV2I GAAGAC 1 cut(s) 1184
BstX2I RGATCY 3 cut(s) 439, 448, 1201
BstYI RGATCY 3 cut(s) 439, 448, 1201
BsuRI GGCC 4 cut(s) 44, 247, 627, 820
BtgI CCRYGG 1 cut(s) 459
BtsCI GGATG 6 cut(s) 688, 731, 763, 849, 877, 1167
BtsIMutI CAGTG 2 cut(s) 189, 741
Cac8I GCNNGC 2 cut(s) 213, 849
CciI TCATGA 1 cut(s) 336
CfoI GCGC 1 cut(s) 986
Cfr10I RCCGGY 1 cut(s) 247
Cfr13I GGNCC 2 cut(s) 381, 1024
Csp6I GTAC 1 cut(s) 11
CviAII CATG 6 cut(s) 149, 173, 337, 343, 460, 529
CviQI GTAC 1 cut(s) 11
DdeI CTNAG 6 cut(s) 207, 231, 519, 815, 881, 954
DpnI GATC 8 cut(s) 318, 341, 441, 450, 524, 687, 1020, 1203
DpnII GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
Eam1104I CTCTTC 2 cut(s) 104, 152
EarI CTCTTC 2 cut(s) 104, 152
Ecl136II GAGCTC 3 cut(s) 814, 880, 908
Eco130I CCWWGG 5 cut(s) 384, 459, 543, 1044, 1113
Eco24I GRGCYC 3 cut(s) 816, 882, 910
Eco31I GGTCTC 1 cut(s) 168
Eco47I GGWCC 2 cut(s) 381, 1024
Eco53kI GAGCTC 3 cut(s) 814, 880, 908
Eco57I CTGAAG 1 cut(s) 953
Eco88I CYCGRG 1 cut(s) 790
Eco91I GGTNACC 1 cut(s) 422
EcoICRI GAGCTC 3 cut(s) 814, 880, 908
EcoO109I RGGNCCY 2 cut(s) 381, 1024
EcoO65I GGTNACC 1 cut(s) 422
EcoRI GAATTC 1 cut(s) 651
EcoRII CCWGG 2 cut(s) 103, 622
EcoT14I CCWWGG 5 cut(s) 384, 459, 543, 1044, 1113
EcoT38I GRGCYC 3 cut(s) 816, 882, 910
ErhI CCWWGG 5 cut(s) 384, 459, 543, 1044, 1113
FaeI CATG 6 cut(s) 152, 176, 340, 346, 463, 532
FalI AAGNNNNNCTT 2 cut(s) 951, 983
FatI CATG 6 cut(s) 148, 172, 336, 342, 459, 528
FbaI TGATCA 3 cut(s) 339, 685, 1018
Fnu4HI GCNGC 7 cut(s) 33, 228, 264, 717, 987, 1104, 1119
FokI GGATG 6 cut(s) 695, 738, 750, 856, 884, 1154
FriOI GRGCYC 3 cut(s) 816, 882, 910
Fsp4HI GCNGC 7 cut(s) 33, 228, 264, 717, 987, 1104, 1119
FspBI CTAG 2 cut(s) 632, 990
GlaI GCGC 1 cut(s) 985
GluI GCNGC 7 cut(s) 33, 228, 264, 717, 987, 1104, 1119
GsuI CTGGAG 1 cut(s) 1131
HaeIII GGCC 4 cut(s) 44, 247, 627, 820
HapII CCGG 1 cut(s) 248
HhaI GCGC 1 cut(s) 986
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 152, 176, 340, 346, 463, 532
Hin6I GCGC 1 cut(s) 984
HinP1I GCGC 1 cut(s) 984
HinfI GANTC 7 cut(s) 145, 455, 564, 710, 1144, 1211, 1220
HpaII CCGG 1 cut(s) 248
HphI GGTGA 3 cut(s) 434, 1045, 1153
Hpy166II GTNNAC 2 cut(s) 664, 1229
Hpy188I TCNGA 6 cut(s) 17, 208, 439, 884, 1014, 1197
Hpy8I GTNNAC 2 cut(s) 664, 1229
Hpy99I CGWCG 1 cut(s) 31
HpyAV CCTTC 6 cut(s) 213, 308, 638, 800, 1125, 1192
HpyCH4III ACNGT 7 cut(s) 294, 376, 736, 825, 836, 865, 1165
HpyCH4V TGCA 4 cut(s) 847, 875, 1055, 1106
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 826, 1109, 1118
HpyF3I CTNAG 6 cut(s) 207, 231, 519, 815, 881, 954
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 152, 176, 340, 346, 463, 532
HspAI GCGC 1 cut(s) 984
Ksp22I TGATCA 3 cut(s) 339, 685, 1018
Kzo9I GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
LmnI GCTCC 3 cut(s) 464, 496, 811
Lsp1109I GCAGC 6 cut(s) 44, 214, 703, 998, 1090, 1105
LweI GCATC 2 cut(s) 834, 862
MaeI CTAG 2 cut(s) 632, 990
MaeIII GTNAC 4 cut(s) 175, 422, 1090, 1141
MalI GATC 8 cut(s) 318, 341, 441, 450, 524, 687, 1020, 1203
MbiI CCGCTC 1 cut(s) 467
MboI GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
MboII GAAGA 8 cut(s) 121, 169, 458, 569, 815, 901, 992, 1184
MfeI CAATTG 1 cut(s) 576
MflI RGATCY 3 cut(s) 439, 448, 1201
MhlI GDGCHC 3 cut(s) 816, 882, 910
MluCI AATT 8 cut(s) 81, 167, 405, 576, 651, 756, 932, 978
MlyI GAGTC 5 cut(s) 464, 573, 1138, 1214, 1220
MmeI TCCRAC 1 cut(s) 838
MroXI GAANNNNTTC 1 cut(s) 966
MseI TTAA 4 cut(s) 408, 672, 1125, 1181
MslI CAYNNNNRTG 1 cut(s) 341
MspCI CTTAAG 2 cut(s) 1124, 1180
MspI CCGG 1 cut(s) 248
MspR9I CCNGG 2 cut(s) 105, 624
MunI CAATTG 1 cut(s) 576
MvaI CCWGG 2 cut(s) 105, 624
MwoI GCNNNNNNNGC 4 cut(s) 41, 826, 1109, 1118
NcoI CCATGG 1 cut(s) 459
NdeII GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
NlaIII CATG 6 cut(s) 152, 176, 340, 346, 463, 532
NlaIV GGNNCC 2 cut(s) 441, 1203
NmuCI GTSAC 4 cut(s) 175, 422, 1090, 1141
PagI TCATGA 1 cut(s) 336
PasI CCCWGGG 1 cut(s) 104
PdmI GAANNNNTTC 1 cut(s) 966
PfeI GAWTC 2 cut(s) 145, 710
PflFI GACNNNGTC 1 cut(s) 1188
PkrI GCNGC 7 cut(s) 34, 229, 265, 718, 988, 1105, 1120
PleI GAGTC 5 cut(s) 463, 572, 1138, 1214, 1219
PpsI GAGTC 5 cut(s) 463, 572, 1138, 1214, 1219
PpuMI RGGWCCY 2 cut(s) 381, 1024
PshAI GACNNNNGTC 1 cut(s) 55
Psp124BI GAGCTC 3 cut(s) 816, 882, 910
Psp5II RGGWCCY 2 cut(s) 381, 1024
Psp6I CCWGG 2 cut(s) 103, 622
PspEI GGTNACC 1 cut(s) 422
PspGI CCWGG 2 cut(s) 103, 622
PspN4I GGNNCC 2 cut(s) 441, 1203
PspPI GGNCC 2 cut(s) 381, 1024
PspPPI RGGWCCY 2 cut(s) 381, 1024
PsuI RGATCY 3 cut(s) 439, 448, 1201
PsyI GACNNNGTC 1 cut(s) 1188
RsaI GTAC 1 cut(s) 12
RsaNI GTAC 1 cut(s) 11
RseI CAYNNNNRTG 1 cut(s) 341
SacI GAGCTC 3 cut(s) 816, 882, 910
SaqAI TTAA 4 cut(s) 408, 672, 1125, 1181
SatI GCNGC 7 cut(s) 33, 228, 264, 717, 987, 1104, 1119
Sau3AI GATC 8 cut(s) 316, 339, 439, 448, 522, 685, 1018, 1201
Sau96I GGNCC 2 cut(s) 381, 1024
SchI GAGTC 5 cut(s) 464, 573, 1138, 1214, 1220
ScrFI CCNGG 2 cut(s) 105, 624
SduI GDGCHC 3 cut(s) 816, 882, 910
SfaNI GCATC 2 cut(s) 834, 862
SinI GGWCC 2 cut(s) 381, 1024
SmiMI CAYNNNNRTG 1 cut(s) 341
SmlI CTYRAG 3 cut(s) 1028, 1124, 1180
SmoI CTYRAG 3 cut(s) 1028, 1124, 1180
Sse9I AATT 8 cut(s) 81, 167, 405, 576, 651, 756, 932, 978
SsiI CCGC 2 cut(s) 264, 467
SspMI CTAG 2 cut(s) 632, 990
SstI GAGCTC 3 cut(s) 816, 882, 910
StyD4I CCNGG 2 cut(s) 103, 622
StyI CCWWGG 5 cut(s) 384, 459, 543, 1044, 1113
TaaI ACNGT 7 cut(s) 294, 376, 736, 825, 836, 865, 1165
TaqI TCGA 4 cut(s) 26, 910, 1068, 1214
TasI AATT 8 cut(s) 81, 167, 405, 576, 651, 756, 932, 978
TauI GCSGC 1 cut(s) 266
TfiI GAWTC 2 cut(s) 145, 710
Tru1I TTAA 4 cut(s) 408, 672, 1125, 1181
Tru9I TTAA 4 cut(s) 408, 672, 1125, 1181
TscAI CASTG 2 cut(s) 196, 741
TseFI GTSAC 4 cut(s) 175, 422, 1090, 1141
TseI GCWGC 6 cut(s) 32, 227, 716, 986, 1103, 1118
Tsp45I GTSAC 4 cut(s) 175, 422, 1090, 1141
TspDTI ATGAA 2 cut(s) 137, 302
TspGWI ACGGA 1 cut(s) 569
TspRI CASTG 2 cut(s) 196, 741
Tth111I GACNNNGTC 1 cut(s) 1188
Vha464I CTTAAG 2 cut(s) 1124, 1180
VpaK11BI GGWCC 2 cut(s) 381, 1024
XapI RAATTY 2 cut(s) 651, 932
XmnI GAANNNNTTC 1 cut(s) 966
XspI CTAG 2 cut(s) 632, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.