pycom10g24340

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0003690
Physical Location & Seq
Forward (+)
26232098 .. 26235034
2937 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2055 bp
ATGATCGATCACAACGGCCAGAGAACCTCTGTACACTTACAGAATGAGGTCAATGGTCATCTGTGTAATAGTGAGATTATGGATGCTAAAGCGGCCAGCTCATGCAGAGTTGGCGGGGAAGAGATGGCTGATGCCATCCCGATTAGGGATCATTTAGGTGAGGAGGTTAGAAGTGTTGTGAATCCAGGGGATGAGATGAAACAAGTGGACATGCAGCAGAGGAATGGTAGAAAGCAAATGGATTCAAGGTCAGGTGCTCTTGAGACAGGGACCACAACTGTGTCTCCTGCTGCTGAGACTAGTGGTCGAAGCAAGCGCCCAGCTATTATATGTGACTTTTATGCGAAGGGTTGGTGCATTAGAGGTAGTTCTTGTAAGTTCCTCCATGTGAAAGATAATCTGAATAGTTCTCAACCACATCCTGAGGGAGATGTTGCTAATTCTACAAGAGAAGTCCAGCTTGATGAAGGTCTAAGAGACATTACTGAGAGATCAAGGTCACCTGGTTTTCGTGACCCTCTGGCTTCTTCAAGTGGAAGTGATTTTACATTTTCTTCACATCTCAGTTCTGAAAAGATCCAATTTTTGGAACACATAGGAAGACAGCACCAGTTTCATGAAAAGCGCAAGTTTCCAACAGTTATTGGAGAGGAGTCAAATGTGGGGTTGTCCACTGATGCAAAGAAATTGCATTCATCCAAAGATGATACAGGCTTTCTCTCGTCACTTAAGGATATAGAAAGGGATGATCAGAGAAATTGGCCTGCTGTTAAAGATAAATCCATATTCATTAGCAGTTTGCATCCTGAGCCTGGATTTTTTTCAACTGGATATATTTCATCATCAGGAAAGTACCTTATAGGGAAGAACTCTTCACATTCGAGCAGTATGGAGGAACCAGCTGGAATTTGGAGCCAGCGTATGCACCATGACCATAGTTCCCCACTTGTGAACCTTGCTTTGAATTCAAGCTCAAGAAATCTTTCAACTACTGCCTTGTTTCCAACTAGCCGTATTTCATCTTGGACTGGATTTTCGTTGCCTTCTAGTTATTCCAATCTTGATTCAAGTCCTCATGATCCTCTTAAGCTTTTTGATCAAAGTAGGGATTACCGTTCTACTAGATCGTCTCCCTTGCTGAAAAGCTCTTCCCCCTTCTCTAGTTCTGAATTGAAAAGTTTGCCGACAACCGTGTCATTGCGCTCTGCTGAAATTAAAACAAAACTTTCTTCAAATGATTGGGAGCCGTCTGTGCCATTCCGGCCATCTTTTATTCTTCCTCATGCATTTCTATCATCTTCGGGGTGGCAGTATGAACCTCTTCGTGACAGCATTGAGTTACCAAAGTTAGCTAACATCTCTGGTGAAGCTTCTTTCTATCCTGAAGGGGCAACTGGTGGGAATAAATTGCATCTGCAACATGGTGAATCTGCTAGTGGGACCACGCGGCCAGCTTGTGATGGTGATACAAACTCTATGTCTTCACATAATACGTATCATGAGAAGGTATTAGATAATAGCTGCTATACACGTGACCATAATTCCCCTGTAACTGAAGCAGAGACAGCGGGGACTTCTGCTGTCTGCCAAAATGGAACCATGACTGGAGAAGAAAATCCCTTGGGCCCTCCTCATCCCAAAGGTAGTACAAAACAAAATAAAGCCAGTAGTGCCACTGGTGATTCTAGACATCGAAGTGATGGTTCTAGACACCAAGAAGGCACAGAATTAGGTAGATTTAGAGAAAAAAATGAAGTGGATGGTGAACATTTGACAGACCGAGATGTACAGCAAGAATCAAAAGCTGTGAAGAATTTCCGTGCGGCTCTTGTAGATTTAGTGAAAGAATTGTTAAAACCAAAATGGCGCGAAGGTAGTCTCAGCAAGGATGCACATAACATGATAGTTAAGAGAGCAGTAGAGAAGATTATCAGTGCTTTTCAGCCCCATCAAATCCCATCTACCATAGAAACAGTTGAGCAATACCTGTCTGCATGCCGTCCAAAAATCTCAAAGCTTGTTGAGGGATATGTTGAAAAATATGGAAAATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0010219 GO:0010220 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0065007 GO:0080134
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

685

Amino Acids

75.34

Weight (kDa)

6.66

Isoelectric Point (pI)

56.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 110 - 130 1.1e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1192
AccB7I CCANNNNNTGG 1 cut(s) 586
AccII CGCG 2 cut(s) 1447, 1869
AciI CCGC 5 cut(s) 92, 114, 1447, 1568, 1823
AclWI GGATC 3 cut(s) 156, 571, 1073
AcoI YGGCCR 4 cut(s) 16, 93, 1262, 1448
AcsI RAATTY 3 cut(s) 906, 964, 1813
AcuI CTGAAG 2 cut(s) 1404, 1575
AcvI CACGTG 1 cut(s) 1532
AfaI GTAC 4 cut(s) 33, 854, 1648, 1788
AfiI CCNNNNNNNGG 3 cut(s) 145, 586, 812
AflII CTTAAG 2 cut(s) 728, 1085
AflIII ACRYGT 1 cut(s) 1529
AhdI GACNNNNNGTC 1 cut(s) 303
AhlI ACTAGT 1 cut(s) 299
AjnI CCWGG 3 cut(s) 184, 502, 811
AleI CACNNNNGTG 1 cut(s) 278
Alw21I GWGCWC 1 cut(s) 259
Alw26I GTCTC 7 cut(s) 257, 288, 290, 471, 1134, 1556, 1883
AlwI GGATC 3 cut(s) 156, 571, 1073
AoxI GGCC 6 cut(s) 16, 93, 761, 1262, 1448, 1624
ApaI GGGCCC 1 cut(s) 1628
ApeKI GCWGC 3 cut(s) 214, 290, 1521
ApoI RAATTY 3 cut(s) 906, 964, 1813
ArsI GACNNNNNNTTYG 4 cut(s) 1018, 1050, 1463, 1495
Asp700I GAANNNNTTC 3 cut(s) 982, 1320, 1814
AspLEI GCGC 4 cut(s) 318, 627, 1203, 1869
AspS9I GGNCC 4 cut(s) 270, 1440, 1624, 1625
AsuHPI GGTGA 7 cut(s) 170, 492, 1376, 1436, 1475, 1691, 1775
AvaII GGWCC 2 cut(s) 270, 1440
AxyI CCTNAGG 1 cut(s) 423
BaeGI GKGCMC 1 cut(s) 1628
BanII GRGCYC 1 cut(s) 1628
BarI GAAGNNNNNNTAC 2 cut(s) 529, 561
BbrPI CACGTG 1 cut(s) 1532
BbsI GAAGAC 2 cut(s) 607, 1473
Bbv12I GWGCWC 1 cut(s) 259
BbvI GCAGC 3 cut(s) 226, 277, 1508
BccI CCATC 8 cut(s) 118, 143, 1273, 1454, 1694, 1754, 1956, 1966
BceAI ACGGC 4 cut(s) 31, 996, 1231, 1983
BciT130I CCWGG 3 cut(s) 186, 504, 813
BclI TGATCA 2 cut(s) 748, 1096
BcoDI GTCTC 7 cut(s) 257, 288, 290, 471, 1134, 1556, 1883
BcuI ACTAGT 1 cut(s) 299
BfaI CTAG 8 cut(s) 300, 1008, 1047, 1122, 1161, 1434, 1686, 1707
BfoI RGCGCY 1 cut(s) 319
BfrI CTTAAG 2 cut(s) 728, 1085
BglI GCCNNNNNGGC 1 cut(s) 1261
BisI GCNGC 6 cut(s) 93, 215, 291, 1448, 1522, 1824
BlsI GCNGC 6 cut(s) 94, 216, 292, 1449, 1523, 1825
Bme1390I CCNGG 3 cut(s) 186, 504, 813
Bme18I GGWCC 2 cut(s) 270, 1440
BmeRI GACNNNNNGTC 1 cut(s) 303
BmgT120I GGNCC 4 cut(s) 270, 1440, 1624, 1625
BmiI GGNNCC 7 cut(s) 271, 897, 914, 1245, 1441, 1597, 1626
BmrFI CCNGG 3 cut(s) 186, 504, 813
BmsI GCATC 6 cut(s) 73, 121, 667, 811, 1420, 1879
BpiI GAAGAC 2 cut(s) 607, 1473
BpmI CTGGAG 1 cut(s) 1626
Bpu10I CCTNAGC 1 cut(s) 807
BpuEI CTTGAG 2 cut(s) 281, 958
Bsa29I ATCGAT 1 cut(s) 6
BsaAI YACGTR 2 cut(s) 1494, 1532
BsaJI CCNNGG 2 cut(s) 185, 1620
BsaXI ACNNNNNCTCC 4 cut(s) 268, 298, 904, 934
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 586, 812
Bse1I ACTGG 7 cut(s) 610, 832, 1033, 1399, 1609, 1665, 1681
Bse21I CCTNAGG 1 cut(s) 423
Bse3DI GCAATG 1 cut(s) 1196
BseBI CCWGG 3 cut(s) 186, 504, 813
BseCI ATCGAT 1 cut(s) 6
BseDI CCNNGG 2 cut(s) 185, 1620
BseLI CCNNNNNNNGG 3 cut(s) 145, 586, 812
BseMI GCAATG 1 cut(s) 1196
BseMII CTCAG 6 cut(s) 285, 414, 477, 577, 798, 1894
BseNI ACTGG 7 cut(s) 610, 832, 1033, 1399, 1609, 1665, 1681
BseRI GAGGAG 3 cut(s) 176, 665, 1620
BseSI GKGCMC 1 cut(s) 1628
BseXI GCAGC 3 cut(s) 226, 277, 1508
BseYI CCCAGC 1 cut(s) 319
Bsh1236I CGCG 2 cut(s) 1447, 1869
BshFI GGCC 6 cut(s) 18, 95, 763, 1264, 1450, 1626
BshVI ATCGAT 1 cut(s) 6
BsiHKAI GWGCWC 1 cut(s) 259
BsiSI CCGG 1 cut(s) 1261
BslFI GGGAC 3 cut(s) 283, 1453, 1585
BslI CCNNNNNNNGG 3 cut(s) 145, 586, 812
BsmAI GTCTC 7 cut(s) 257, 288, 290, 471, 1134, 1556, 1883
BsmBI CGTCTC 1 cut(s) 1134
BsmFI GGGAC 3 cut(s) 283, 1453, 1585
BsmI GAATGC 1 cut(s) 691
BsnI GGCC 6 cut(s) 18, 95, 763, 1264, 1450, 1626
Bsp120I GGGCCC 1 cut(s) 1624
Bsp1286I GDGCHC 2 cut(s) 259, 1628
Bsp1407I TGTACA 2 cut(s) 31, 1786
Bsp143I GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
BspACI CCGC 5 cut(s) 92, 114, 1447, 1568, 1823
BspANI GGCC 6 cut(s) 18, 95, 763, 1264, 1450, 1626
BspCNI CTCAG 6 cut(s) 286, 415, 478, 576, 799, 1893
BspDI ATCGAT 1 cut(s) 6
BspFNI CGCG 2 cut(s) 1447, 1869
BspHI TCATGA 3 cut(s) 616, 1075, 1498
BspLI GGNNCC 7 cut(s) 271, 897, 914, 1245, 1441, 1597, 1626
BspPI GGATC 3 cut(s) 156, 571, 1073
BspQI GCTCTTC 1 cut(s) 1153
BspTI CTTAAG 2 cut(s) 728, 1085
BsrDI GCAATG 1 cut(s) 1196
BsrGI TGTACA 2 cut(s) 31, 1786
BsrI ACTGG 7 cut(s) 610, 832, 1033, 1399, 1609, 1665, 1681
BssECI CCNNGG 2 cut(s) 185, 1620
BssMI GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
BssT1I CCWWGG 1 cut(s) 1620
Bst2UI CCWGG 3 cut(s) 186, 504, 813
Bst4CI ACNGT 5 cut(s) 280, 640, 1115, 1192, 1975
Bst6I CTCTTC 4 cut(s) 114, 877, 1153, 1326
BstAFI CTTAAG 2 cut(s) 728, 1085
BstAUI TGTACA 2 cut(s) 31, 1786
BstBAI YACGTR 2 cut(s) 1494, 1532
BstC8I GCNNGC 6 cut(s) 97, 314, 765, 917, 1452, 1996
BstDEI CTNAG 7 cut(s) 294, 423, 473, 486, 563, 807, 1880
BstEII GGTNACC 1 cut(s) 498
BstFNI CGCG 2 cut(s) 1447, 1869
BstH2I RGCGCY 1 cut(s) 319
BstHHI GCGC 4 cut(s) 318, 627, 1203, 1869
BstKTI GATC 9 cut(s) 6, 10, 151, 494, 579, 751, 1081, 1099, 1127
BstMAI GTCTC 7 cut(s) 257, 288, 290, 471, 1134, 1556, 1883
BstMBI GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
BstMWI GCNNNNNNNGC 7 cut(s) 92, 111, 808, 1252, 1261, 1565, 1670
BstNI CCWGG 3 cut(s) 186, 504, 813
BstNSI RCATGY 2 cut(s) 214, 1998
BstPI GGTNACC 1 cut(s) 498
BstSCI CCNGG 3 cut(s) 184, 502, 811
BstSLI GKGCMC 1 cut(s) 1628
BstSNI TACGTA 1 cut(s) 1494
BstUI CGCG 2 cut(s) 1447, 1869
BstV1I GCAGC 3 cut(s) 226, 277, 1508
BstV2I GAAGAC 2 cut(s) 607, 1473
BstX2I RGATCY 1 cut(s) 576
BstYI RGATCY 1 cut(s) 576
Bsu15I ATCGAT 1 cut(s) 6
Bsu36I CCTNAGG 1 cut(s) 423
BsuRI GGCC 6 cut(s) 18, 95, 763, 1264, 1450, 1626
BsuTUI ATCGAT 1 cut(s) 6
BtsIMutI CAGTG 3 cut(s) 672, 1674, 1939
Cac8I GCNNGC 6 cut(s) 97, 314, 765, 917, 1452, 1996
CciI TCATGA 3 cut(s) 616, 1075, 1498
CfoI GCGC 4 cut(s) 318, 627, 1203, 1869
Cfr13I GGNCC 4 cut(s) 270, 1440, 1624, 1625
ClaI ATCGAT 1 cut(s) 6
CsiI ACCWGGT 1 cut(s) 502
Csp6I GTAC 4 cut(s) 32, 853, 1647, 1787
CviQI GTAC 4 cut(s) 32, 853, 1647, 1787
DdeI CTNAG 7 cut(s) 294, 423, 473, 486, 563, 807, 1880
DpnI GATC 9 cut(s) 5, 9, 150, 493, 578, 750, 1080, 1098, 1126
DpnII GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
DrdI GACNNNNNNGTC 1 cut(s) 1192
DriI GACNNNNNGTC 1 cut(s) 303
DseDI GACNNNNNNGTC 1 cut(s) 1192
EaeI YGGCCR 4 cut(s) 16, 93, 1262, 1448
Eam1104I CTCTTC 4 cut(s) 114, 877, 1153, 1326
Eam1105I GACNNNNNGTC 1 cut(s) 303
EarI CTCTTC 4 cut(s) 114, 877, 1153, 1326
Eco105I TACGTA 1 cut(s) 1494
Eco130I CCWWGG 1 cut(s) 1620
Eco24I GRGCYC 1 cut(s) 1628
Eco47I GGWCC 2 cut(s) 270, 1440
Eco57I CTGAAG 2 cut(s) 1404, 1575
Eco72I CACGTG 1 cut(s) 1532
Eco81I CCTNAGG 1 cut(s) 423
Eco91I GGTNACC 1 cut(s) 498
EcoO109I RGGNCCY 1 cut(s) 1625
EcoO65I GGTNACC 1 cut(s) 498
EcoRI GAATTC 1 cut(s) 964
EcoRII CCWGG 3 cut(s) 184, 502, 811
EcoT14I CCWWGG 1 cut(s) 1620
EcoT22I ATGCAT 1 cut(s) 1288
EcoT38I GRGCYC 1 cut(s) 1628
ErhI CCWWGG 1 cut(s) 1620
Esp3I CGTCTC 1 cut(s) 1134
FalI AAGNNNNNCTT 2 cut(s) 444, 476
FaqI GGGAC 3 cut(s) 283, 1453, 1585
FauI CCCGC 2 cut(s) 107, 1561
FbaI TGATCA 2 cut(s) 748, 1096
Fnu4HI GCNGC 6 cut(s) 93, 215, 291, 1448, 1522, 1824
FriOI GRGCYC 1 cut(s) 1628
Fsp4HI GCNGC 6 cut(s) 93, 215, 291, 1448, 1522, 1824
FspBI CTAG 8 cut(s) 300, 1008, 1047, 1122, 1161, 1434, 1686, 1707
GlaI GCGC 4 cut(s) 317, 626, 1202, 1868
GluI GCNGC 6 cut(s) 93, 215, 291, 1448, 1522, 1824
GsaI CCCAGC 1 cut(s) 323
GsuI CTGGAG 1 cut(s) 1626
HaeII RGCGCY 1 cut(s) 319
HaeIII GGCC 6 cut(s) 18, 95, 763, 1264, 1450, 1626
HapII CCGG 1 cut(s) 1261
HhaI GCGC 4 cut(s) 318, 627, 1203, 1869
Hin6I GCGC 4 cut(s) 316, 625, 1201, 1867
HinP1I GCGC 4 cut(s) 316, 625, 1201, 1867
HindIII AAGCTT 3 cut(s) 1088, 1368, 2015
HinfI GANTC 7 cut(s) 181, 242, 653, 1064, 1427, 1682, 1796
HpaII CCGG 1 cut(s) 1261
HphI GGTGA 7 cut(s) 170, 492, 1376, 1436, 1475, 1691, 1775
Hpy166II GTNNAC 5 cut(s) 34, 208, 672, 952, 1766
Hpy188I TCNGA 4 cut(s) 402, 571, 753, 1168
Hpy8I GTNNAC 5 cut(s) 34, 208, 672, 952, 1766
HpyAV CCTTC 8 cut(s) 340, 461, 1053, 1165, 1379, 1498, 1712, 1865
HpyCH4III ACNGT 5 cut(s) 280, 640, 1115, 1192, 1975
HpyCH4IV ACGT 2 cut(s) 1493, 1531
HpyF10VI GCNNNNNNNGC 7 cut(s) 92, 111, 808, 1252, 1261, 1565, 1670
HpyF3I CTNAG 7 cut(s) 294, 423, 473, 486, 563, 807, 1880
HpySE526I ACGT 2 cut(s) 1493, 1531
HspAI GCGC 4 cut(s) 316, 625, 1201, 1867
Ksp22I TGATCA 2 cut(s) 748, 1096
Kzo9I GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
LguI GCTCTTC 1 cut(s) 1153
LmnI GCTCC 2 cut(s) 912, 1243
Lsp1109I GCAGC 3 cut(s) 226, 277, 1508
LweI GCATC 6 cut(s) 73, 121, 667, 811, 1420, 1879
MabI ACCWGGT 1 cut(s) 502
MaeI CTAG 8 cut(s) 300, 1008, 1047, 1122, 1161, 1434, 1686, 1707
MaeII ACGT 2 cut(s) 1493, 1531
MaeIII GTNAC 8 cut(s) 332, 498, 512, 723, 1325, 1338, 1532, 1549
MalI GATC 9 cut(s) 5, 9, 150, 493, 578, 750, 1080, 1098, 1126
MboI GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
MflI RGATCY 1 cut(s) 576
MhlI GDGCHC 2 cut(s) 259, 1628
MlyI GAGTC 1 cut(s) 662
MmeI TCCRAC 2 cut(s) 659, 1028
Mph1103I ATGCAT 1 cut(s) 1288
MroXI GAANNNNTTC 3 cut(s) 982, 1320, 1814
MseI TTAA 6 cut(s) 729, 771, 1086, 1215, 1853, 1908
MslI CAYNNNNRTG 3 cut(s) 156, 278, 1695
MspA1I CMGCKG 2 cut(s) 902, 1568
MspCI CTTAAG 2 cut(s) 728, 1085
MspI CCGG 1 cut(s) 1261
MspR9I CCNGG 3 cut(s) 186, 504, 813
Mva1269I GAATGC 1 cut(s) 691
MvaI CCWGG 3 cut(s) 186, 504, 813
MvnI CGCG 2 cut(s) 1447, 1869
MwoI GCNNNNNNNGC 7 cut(s) 92, 111, 808, 1252, 1261, 1565, 1670
NdeII GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
NlaIV GGNNCC 7 cut(s) 271, 897, 914, 1245, 1441, 1597, 1626
NmuCI GTSAC 6 cut(s) 332, 498, 512, 723, 1325, 1532
NsiI ATGCAT 1 cut(s) 1288
NspI RCATGY 2 cut(s) 214, 1998
OliI CACNNNNGTG 1 cut(s) 278
PaeI GCATGC 1 cut(s) 1998
PagI TCATGA 3 cut(s) 616, 1075, 1498
PciSI GCTCTTC 1 cut(s) 1153
PctI GAATGC 1 cut(s) 691
PdmI GAANNNNTTC 3 cut(s) 982, 1320, 1814
PfeI GAWTC 6 cut(s) 181, 242, 1064, 1427, 1682, 1796
PflMI CCANNNNNTGG 1 cut(s) 586
PkrI GCNGC 6 cut(s) 94, 216, 292, 1449, 1523, 1825
PleI GAGTC 1 cut(s) 661
PmaCI CACGTG 1 cut(s) 1532
PmlI CACGTG 1 cut(s) 1532
PpsI GAGTC 1 cut(s) 661
Ppu21I YACGTR 2 cut(s) 1494, 1532
Psp6I CCWGG 3 cut(s) 184, 502, 811
PspCI CACGTG 1 cut(s) 1532
PspEI GGTNACC 1 cut(s) 498
PspFI CCCAGC 1 cut(s) 319
PspGI CCWGG 3 cut(s) 184, 502, 811
PspN4I GGNNCC 7 cut(s) 271, 897, 914, 1245, 1441, 1597, 1626
PspOMI GGGCCC 1 cut(s) 1624
PspPI GGNCC 4 cut(s) 270, 1440, 1624, 1625
PsuI RGATCY 1 cut(s) 576
PvuII CAGCTG 1 cut(s) 902
RsaI GTAC 4 cut(s) 33, 854, 1648, 1788
RsaNI GTAC 4 cut(s) 32, 853, 1647, 1787
RseI CAYNNNNRTG 3 cut(s) 156, 278, 1695
SapI GCTCTTC 1 cut(s) 1153
SaqAI TTAA 6 cut(s) 729, 771, 1086, 1215, 1853, 1908
SatI GCNGC 6 cut(s) 93, 215, 291, 1448, 1522, 1824
Sau3AI GATC 9 cut(s) 3, 7, 148, 491, 576, 748, 1078, 1096, 1124
Sau96I GGNCC 4 cut(s) 270, 1440, 1624, 1625
SchI GAGTC 1 cut(s) 662
ScrFI CCNGG 3 cut(s) 186, 504, 813
SduI GDGCHC 2 cut(s) 259, 1628
SexAI ACCWGGT 1 cut(s) 502
SfaNI GCATC 6 cut(s) 73, 121, 667, 811, 1420, 1879
SinI GGWCC 2 cut(s) 270, 1440
SmiMI CAYNNNNRTG 3 cut(s) 156, 278, 1695
SmlI CTYRAG 4 cut(s) 260, 728, 973, 1085
SmoI CTYRAG 4 cut(s) 260, 728, 973, 1085
SnaBI TACGTA 1 cut(s) 1494
SpeI ACTAGT 1 cut(s) 299
SphI GCATGC 1 cut(s) 1998
SsiI CCGC 5 cut(s) 92, 114, 1447, 1568, 1823
SspMI CTAG 8 cut(s) 300, 1008, 1047, 1122, 1161, 1434, 1686, 1707
StyD4I CCNGG 3 cut(s) 184, 502, 811
StyI CCWWGG 1 cut(s) 1620
TaaI ACNGT 5 cut(s) 280, 640, 1115, 1192, 1975
TaiI ACGT 2 cut(s) 1496, 1534
TaqI TCGA 4 cut(s) 6, 307, 881, 1693
TaqII GACCGA 1 cut(s) 1794
TatI WGTACW 3 cut(s) 31, 1646, 1786
TauI GCSGC 3 cut(s) 95, 1450, 1826
TfiI GAWTC 6 cut(s) 181, 242, 1064, 1427, 1682, 1796
Tru1I TTAA 6 cut(s) 729, 771, 1086, 1215, 1853, 1908
Tru9I TTAA 6 cut(s) 729, 771, 1086, 1215, 1853, 1908
TscAI CASTG 3 cut(s) 679, 1681, 1939
TseFI GTSAC 6 cut(s) 332, 498, 512, 723, 1325, 1532
TseI GCWGC 3 cut(s) 214, 290, 1521
Tsp45I GTSAC 6 cut(s) 332, 498, 512, 723, 1325, 1532
TspGWI ACGGA 1 cut(s) 1808
TspRI CASTG 3 cut(s) 679, 1681, 1939
Van91I CCANNNNNTGG 1 cut(s) 586
Vha464I CTTAAG 2 cut(s) 728, 1085
VpaK11BI GGWCC 2 cut(s) 270, 1440
XapI RAATTY 3 cut(s) 906, 964, 1813
XbaI TCTAGA 2 cut(s) 1685, 1706
XceI RCATGY 2 cut(s) 214, 1998
XcmI CCANNNNNNNNNTGG 1 cut(s) 906
XmnI GAANNNNTTC 3 cut(s) 982, 1320, 1814
XspI CTAG 8 cut(s) 300, 1008, 1047, 1122, 1161, 1434, 1686, 1707
Zsp2I ATGCAT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.