Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0010099

Physical Location & Seq

Genomic Coordinates Forward (+)

1926257 .. 1930272

Gene Structure 4016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3477 bp

ATGGATAAACTCAAACAACTTTTATCGAATTCAAATATCAAAGATCAAAGTGAGAAGGTAAACCAATCTCATAATTTTAAGAAAAGTCCAATAATCCGACCGATCCGATTGGTATTGCCGTATTGGTCCCGTCGTCGCTACACAAACCAAAACCTCACTACTACAAACAAACTAAAAACTCTCCGCCGCGGGGCCCCACCCACCGTCAGCAAGCAAACGACCGACTGTAAAGTCTGTCTCCTCCTCTTCCTCCTTCCCTTCGATCTCATTTCGCCCAAAGCAAAACAAACGACAATGGCTTTCTCATCGTACATCGGCAGCACCCGCCGCGGCGGCTGGGCCAACTCCCTCCTCCCCTCCTCCTCCGCTTCCAACCCCAAATCCAAGCTCACTAGAAAGCCCCGCAGGCGATTATTCCTCCGCGACTTCATCTTCGCAAACTTCTTCATCATCGGCCTCTCGATCTCCCTCTTCCTATTTCTCATCGTCATCCTCCGCTACGGCGTCCCCACACCCCTCTCCACCCACTTCAAATCCAAATCCTCCACCCGCTTCTCCAAGCCCCGAAAGCCCATCTCCCGCAAACCCGTCTCGGCCGCCGATTCGGGATCCGCCGCCGCTGCAGGGGCCACCGTTGACATCACCACCAAGGAGCTGTACGACAAGATTGAATTCTCGGATGTGGACGGCGGGCCGTGGAAGCAGGGGTGGCGGGTGAGCTACAAAGGGGACGAGTGGGACTCTGAGAAATTGAAGGTGTTTGTGGTGCCCCATTCGCATATCGATCCCGGCTGGAAGCTCACCGTCGAAGAGTACTACGATAGGCAATCCAGGCATATTCTCGACACCATTGTCGATACGCTTTCTAAGGATTCTCGGCGCAAGTTTATATGGGAAGAGATGTCTTATCTCGAAAGATGGTGGAGGGACTCCTCTGATCTAAAAAGGGAGTCATTCACAAATTTGGTGAAGAATGGTCAGCTAGAAATTGTTGGAGGTGGCTGGGTAATGAACGATGAGGCTAATTCACATTATTATGCCATAATTGAGCAGATGACAGAAGGAAATATGTGGTTGAATGAAACTGTTGGGGTTGTTCCTAAAAATGCATGGGCGATAGATCCGTTTGGATACTCACCTACCATGGCATATCTTCTCCGTCGCATGGGTTTTGAAAATATGCTTATTCAGAGGACCCATTATGAGCTGAAGAAGGAACTTGCACTGCATAAAAATTTGGAGTATATATGGCGTCAGAGCTGGGATGTGGATGAAACTACCGATATTTTTGTCCATATGATGCCCTTTTATTCTTATGATATTCCACATACTTGTGGGCCAGAGCCTGCCATTTGTTGTCAGTTTGACTTTGCTCGAATGCGTGGCTTTGCTTATGAACTCTGTCCGTGGGGAGACAATCCGGTAGAGACCAACCAGGAAAATGTTCAGGAGCGGGCACTTATTCTACTGGATCGATATAAGAAGAAATCAACACTGTACAGGACAAATACACTTCTTATTCCTCTTGGAGATGATTTCCGCTACATAAGCATCGATGAAGCTGAAGCTCAGTTTAGGAACTACCAAATGTTGTTTGACTATATCAATTCTAATCCCAGTTTAAACACAGAGGTCAAGTTTGGAACTTTGGAAGATTACTTTTGGACCCTTCGTGAGGAGGCTGAAAGAATAAATCATTCACTTCCTGGTGAGATTGGTTCCGGTCAGGTTGGGGGTTTTCCTTCTTTGTCAGGTGACTTCTTCACTTATGCTGATAGGCAACAGGACTATTGGAGTGGCTATTATGTTTCCAGGCCTTTCTTCAAGGCTGTTGATCGAGTACTTGAGCAAACACTTCGTACCACAGATATTATGATGGCTTTCCTGCTTGGGTACTGCGAGAGAGCACAATGTGAAAAGTTGCCCATGGGGTTCTCCTACAAGTTGGCTGCTGCCAGGAGGAACTTGGCTCTTTTCCAGCATCATGATGGTGTGACTGGTACTGCTAAAGATCATGTGGTCCTGGACTATGGGACTCGGATGCACACATCTTTGCAGGACTTGCAGATTTTCATGTCTAAAGCTATTGAAGTACTGCTTGGAATACGCCATGAGAAAAATGACAATAACCCTTCTCAGTTTGAGCCAGAACAGGTCAGATCTAAATATGATGTTCAGCCTGTCCATAGAGCAATCATGGCCCGTGAAGGAACTAGACAATCAGTGGTGTTTTTTAATCCTTTGGAGCAGACAAGAGAAGAGGTTGTGATGGTTATTGTTAACCGTCCAGATGTTACTGTTCTGGACTCAAACTCGACATGTGTTCAAAGCCAAATATCTCCTGAGCTGCAGCATGATAAAAGCAAAATATTTACTGGAAGGCATCGTGTTTACTGGCAGGTTTCTGTTCCCGCCTTGGGGTTGCAAACATATTACATTGCTAACGGGTTGCATGGATGTGAAAAGGCCAAACCAGCAAAACTAAGATTCTTCTCAAAGTCTGGTTCTTTATCTTGCCCCACTCCATATGCATGCTCAAAAGCAGACGCTGATGTGGCTGAAATCCAGAACAGGCACCAAATACTCACCTTTGATGTGAAGCATGGTCTGTTGCAGAAAGTCAGCCATAAGAATGGTTCCCAAAATGTTGTGGGTGAAGAAATAGCTATGTACTCTAGTATGGGAAGTGGAGCCTACCTATTTAAACCCAACGGTGATGCACAGCTTATCATTGAAGAAGGTGGGCAGTTGGTGATCTCTGAGGGCCCTTTGGTGCAGGAAGTATACTCTTATCCAAGGACCGAATGGGAAAAGAGCCCCATTTCTCATAGCACTCGTGTCTACAATGGAGAGAATACCGTACAGGAATTTCTCATCGAGAAGGAGTATCATGTTGAGCTTCTTGGTCAGGAGTTCGATGACAAGGAGTTGATAGTTAGATATAAAACAGATGTTGATAACAAAAGAATATTCTTTTCTGATTTAAATGGCTTTCAGATGAGCCGGAGAGAAACCTATGATAAAATCCCAGTTCAGGGCAATTACTACCCTATGCCTTCTCTTGCATTCATGCAGGGGTCTGCTGGTCAGCGGTTTTCGGTCCATTCCCGGCAGTCATTGGGTGTGGCAAGTCTTAAAAATGGATGGTTGGAGATTATGCTTGACCGTCGTTTGGTAAGAGATGATGGACGAGGTCTTGGACAAGGAGTGATGGACAACCGCGCAATGAATGTAATCTTCCACATTGTTGTGGAGTCTAAAATTTCAGCCACATCAAACCCGGTTTCCAACTCATTGCCCTTAAATCCCTCGCTTCTTTCTCACCGCATCAGTGCTCACCTGAACTATCCGTTGCATGCATTCATTGCCAAGAAGCCAGAGGACTTATCAGTGCAGCCAACCCCAAGATCGATCTCCCCCTTAGCCGCTCCCTTACCATGTGATCGATCCCGGAAGTTTGCATATTGTAAGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0004572 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006486 GO:0006487 GO:0006491 GO:0006517 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009628 GO:0009651 GO:0009987 GO:0012505 GO:0015923 GO:0015924 GO:0016020 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0034645 GO:0036211 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0070085 GO:0071704 GO:0097708 GO:0098588 GO:0098791 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 map00510 map00513 map01100

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

1159

Amino Acids

132.69

Weight (kDa)

8.83

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_38N	PF01074	252 - 590	3e-84	Glycosyl hydrolases family 38 N-terminal domain
Alpha-mann_mid	PF09261	597 - 699	2.7e-20	Alpha mannosidase middle domain
Glyco_hydro_38C	PF07748	855 - 1064	4.9e-31	Glycosyl hydrolases family 38 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14950
fragaria_vesca	FvH4_6g49910 FvH4_6g49910
malus_domestica	MD09G1040900.v1.1 MD17G1042200.v1.1
prunus_persica	Prupe.3G276800_v2.0.a1
pyrus_communis	pycom111g03190 pycom17g03770
rosa_chinensis	RchiOBHm_Chr2g0170081
rosa_laevigata	RLG00000021920
rosa_multiflora	Rmu_co8321257.1_g000001 Rmu_sc0013078.1_g000007 Rmu_sc0013453.1_g000004
rosa_roxburghii	Rroxscaffold_2G00081600
rosa_rugosa	Rorug02G0545500 Rorug02G0545600.1
rosa_samantha	Rh2AG617700 Rh2BG629200 Rh2CG598600 Rh2DG641000
rosa_wichuraiana	Rw2G051140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	230, 851
Acc36I	ACCTGC	1 cut(s)	2389
AccB1I	GGYRCC	2 cut(s)	766, 2574
AccBSI	CCGCTC	2 cut(s)	1453, 3428
AccI	GTMKAC	2 cut(s)	2784, 2841
AccII	CGCG	4 cut(s)	189, 330, 423, 3222
AclWI	GGATC	7 cut(s)	97, 603, 616, 779, 1115, 1479, 3441
AcoI	YGGCCR	1 cut(s)	594
AcsI	RAATTY	6 cut(s)	28, 671, 961, 1234, 2867, 3261
AcuI	CTGAAG	2 cut(s)	1229, 1584
AcyI	GRCGYC	2 cut(s)	504, 1252
AdeI	CACNNNGTG	1 cut(s)	1913
AfiI	CCNNNNNNNGG	9 cut(s)	190, 624, 1165, 1675, 2417, 2418, 3034, 3035, 3172
AflIII	ACRYGT	1 cut(s)	2318
AjnI	CCWGG	6 cut(s)	830, 1434, 1705, 1811, 1955, 2022
AjuI	GAANNNNNNNTTGG	2 cut(s)	2082, 2114
Alw21I	GWGCWC	2 cut(s)	1909, 3337
Alw26I	GTCTC	4 cut(s)	242, 595, 1407, 1421
AlwI	GGATC	7 cut(s)	97, 603, 616, 779, 1115, 1479, 3441
AlwNI	CAGNNNCTG	2 cut(s)	1346, 2549
ApaI	GGGCCC	2 cut(s)	196, 2768
ApeKI	GCWGC	7 cut(s)	318, 620, 1949, 1952, 2347, 2350, 3394
ApoI	RAATTY	6 cut(s)	28, 671, 961, 1234, 2867, 3261
ArsI	GACNNNNNNTTYG	2 cut(s)	416, 448
Asp700I	GAANNNNTTC	1 cut(s)	1443
AspLEI	GCGC	2 cut(s)	882, 3224
AsuC2I	CCSGG	4 cut(s)	789, 3109, 3281, 3451
AvaII	GGWCC	6 cut(s)	126, 1194, 1665, 2020, 2799, 3100
BaeGI	GKGCMC	4 cut(s)	196, 771, 1459, 2768
BamHI	GGATCC	1 cut(s)	608
BanI	GGYRCC	2 cut(s)	766, 2574
BanII	GRGCYC	3 cut(s)	196, 2768, 2819
BauI	CACGAG	1 cut(s)	2835
Bbv12I	GWGCWC	2 cut(s)	1909, 3337
BbvI	GCAGC	7 cut(s)	330, 607, 1936, 1939, 2334, 2362, 3406
BccI	CCATC	8 cut(s)	581, 912, 1870, 1982, 2263, 3138, 3179, 3205
BceAI	ACGGC	4 cut(s)	103, 517, 679, 703
BcgI	CGANNNNNNTGC	2 cut(s)	1838, 1872
BciT130I	CCWGG	6 cut(s)	832, 1436, 1707, 1813, 1957, 2024
BciVI	GTATCC	1 cut(s)	1124
BcnI	CCSGG	4 cut(s)	789, 3109, 3281, 3451
BcoDI	GTCTC	4 cut(s)	242, 595, 1407, 1421
BfaI	CTAG	4 cut(s)	393, 983, 2214, 2676
BfmI	CTRYAG	2 cut(s)	621, 2348
BfuAI	ACCTGC	1 cut(s)	2389
BfuI	GTATCC	1 cut(s)	1124
BglI	GCCNNNNNGGC	2 cut(s)	333, 406
BglII	AGATCT	1 cut(s)	2159
BmcAI	AGTACT	3 cut(s)	815, 1842, 2094
Bme18I	GGWCC	6 cut(s)	126, 1194, 1665, 2020, 2799, 3100
BmrI	ACTGGG	2 cut(s)	1611, 3023
BmsI	GCATC	7 cut(s)	1290, 1560, 1990, 2031, 2392, 2707, 3336
BmuI	ACTGGG	2 cut(s)	1611, 3023
BplI	GAGNNNNNCTC	2 cut(s)	725, 757
Bpu10I	CCTNAGC	2 cut(s)	2343, 3421
BpuEI	CTTGAG	1 cut(s)	1865
BpuMI	CCSGG	4 cut(s)	789, 3109, 3281, 3451
Bsa29I	ATCGAT	5 cut(s)	783, 1474, 1554, 3410, 3445
BsaHI	GRCGYC	2 cut(s)	504, 1252
BsaI	GGTCTC	1 cut(s)	1421
BsaJI	CCNNGG	9 cut(s)	187, 328, 648, 695, 1143, 1406, 1926, 2415, 2795
BsaWI	WCCGGW	2 cut(s)	1420, 1721
Bsc4I	CCNNNNNNNGG	9 cut(s)	190, 624, 1165, 1675, 2417, 2418, 3034, 3035, 3172
Bse1I	ACTGG	6 cut(s)	1473, 1617, 2002, 2380, 2399, 3029
Bse3DI	GCAATG	4 cut(s)	2436, 3231, 3293, 3363
BseBI	CCWGG	6 cut(s)	832, 1436, 1707, 1813, 1957, 2024
BseCI	ATCGAT	5 cut(s)	783, 1474, 1554, 3410, 3445
BseDI	CCNNGG	9 cut(s)	187, 328, 648, 695, 1143, 1406, 1926, 2415, 2795
BseGI	GGATG	7 cut(s)	489, 685, 1270, 1276, 2046, 2462, 3149
BseLI	CCNNNNNNNGG	9 cut(s)	190, 624, 1165, 1675, 2417, 2418, 3034, 3035, 3172
BseMI	GCAATG	4 cut(s)	2436, 3231, 3293, 3363
BseMII	CTCAG	5 cut(s)	735, 1583, 2150, 2334, 2751
BseNI	ACTGG	6 cut(s)	1473, 1617, 2002, 2380, 2399, 3029
BseRI	GAGGAG	7 cut(s)	230, 233, 341, 349, 352, 922, 1691
BseSI	GKGCMC	4 cut(s)	196, 771, 1459, 2768
BseX3I	CGGCCG	1 cut(s)	594
BseXI	GCAGC	7 cut(s)	330, 607, 1936, 1939, 2334, 2362, 3406
BseYI	CCCAGC	3 cut(s)	336, 1002, 1260
BsgI	GTGCAG	2 cut(s)	2795, 3413
Bsh1236I	CGCG	4 cut(s)	189, 330, 423, 3222
Bsh1285I	CGRYCG	3 cut(s)	101, 222, 597
BshNI	GGYRCC	2 cut(s)	766, 2574
BshVI	ATCGAT	5 cut(s)	783, 1474, 1554, 3410, 3445
BsiEI	CGRYCG	3 cut(s)	101, 222, 597
BsiHKAI	GWGCWC	2 cut(s)	1909, 3337
BsiSI	CCGG	7 cut(s)	789, 1421, 1722, 3004, 3109, 3281, 3451
BslFI	GGGAC	6 cut(s)	112, 491, 743, 752, 941, 2047
BslI	CCNNNNNNNGG	9 cut(s)	190, 624, 1165, 1675, 2417, 2418, 3034, 3035, 3172
BsmAI	GTCTC	4 cut(s)	242, 595, 1407, 1421
BsmBI	CGTCTC	1 cut(s)	595
BsmFI	GGGAC	6 cut(s)	112, 491, 743, 752, 941, 2047
BsmI	GAATGC	3 cut(s)	1383, 3065, 3359
Bso31I	GGTCTC	1 cut(s)	1421
Bsp120I	GGGCCC	2 cut(s)	192, 2764
Bsp1286I	GDGCHC	7 cut(s)	196, 771, 1459, 1909, 2768, 2819, 3337
Bsp1407I	TGTACA	1 cut(s)	1497
Bsp19I	CCATGG	2 cut(s)	1143, 1926
BspCNI	CTCAG	5 cut(s)	736, 1582, 2149, 2335, 2752
BspDI	ATCGAT	5 cut(s)	783, 1474, 1554, 3410, 3445
BspFNI	CGCG	4 cut(s)	189, 330, 423, 3222
BspHI	TCATGA	1 cut(s)	1984
BspMAI	CTGCAG	2 cut(s)	625, 2352
BspMI	ACCTGC	1 cut(s)	2389
BspPI	GGATC	7 cut(s)	97, 603, 616, 779, 1115, 1479, 3441
BspT107I	GGYRCC	2 cut(s)	766, 2574
BspTNI	GGTCTC	1 cut(s)	1421
BsrBI	CCGCTC	2 cut(s)	1453, 3428
BsrDI	GCAATG	4 cut(s)	2436, 3231, 3293, 3363
BsrGI	TGTACA	1 cut(s)	1497
BsrI	ACTGG	6 cut(s)	1473, 1617, 2002, 2380, 2399, 3029
BssECI	CCNNGG	9 cut(s)	187, 328, 648, 695, 1143, 1406, 1926, 2415, 2795
BssNAI	GTATAC	1 cut(s)	2785
BssNI	GRCGYC	2 cut(s)	504, 1252
BssSI	CACGAG	1 cut(s)	2835
BssT1I	CCWWGG	5 cut(s)	648, 1143, 1926, 2415, 2795
Bst1107I	GTATAC	1 cut(s)	2785
Bst2BI	CACGAG	1 cut(s)	2835
Bst2UI	CCWGG	6 cut(s)	832, 1436, 1707, 1813, 1957, 2024
Bst6I	CTCTTC	5 cut(s)	251, 476, 804, 891, 2253
BstACI	GRCGYC	2 cut(s)	504, 1252
BstAPI	GCANNNNNTGC	2 cut(s)	2062, 3365
BstAUI	TGTACA	1 cut(s)	1497
BstC8I	GCNNGC	7 cut(s)	212, 407, 692, 1347, 1455, 2533, 3357
BstDEI	CTNAG	8 cut(s)	744, 867, 1569, 2136, 2343, 2483, 2760, 3421
BstDSI	CCRYGG	6 cut(s)	187, 328, 695, 1143, 1406, 1926
BstENI	CCTNNNNNAGG	1 cut(s)	1673
BstF5I	GGATG	7 cut(s)	489, 685, 1270, 1276, 2046, 2462, 3149
BstFNI	CGCG	4 cut(s)	189, 330, 423, 3222
BstHHI	GCGC	2 cut(s)	882, 3224
BstMAI	GTCTC	4 cut(s)	242, 595, 1407, 1421
BstMCI	CGRYCG	3 cut(s)	101, 222, 597
BstNI	CCWGG	6 cut(s)	832, 1436, 1707, 1813, 1957, 2024
BstNSI	RCATGY	3 cut(s)	2322, 2535, 3359
BstSFI	CTRYAG	2 cut(s)	621, 2348
BstSLI	GKGCMC	4 cut(s)	196, 771, 1459, 2768
BstUI	CGCG	4 cut(s)	189, 330, 423, 3222
BstV1I	GCAGC	7 cut(s)	330, 607, 1936, 1939, 2334, 2362, 3406
BstX2I	RGATCY	3 cut(s)	608, 1120, 2159
BstXI	CCANNNNNNTGG	1 cut(s)	2633
BstYI	RGATCY	3 cut(s)	608, 1120, 2159
BstZ17I	GTATAC	1 cut(s)	2785
BstZI	CGGCCG	1 cut(s)	594
Bsu15I	ATCGAT	5 cut(s)	783, 1474, 1554, 3410, 3445
BsuI	GTATCC	1 cut(s)	1124
BsuTUI	ATCGAT	5 cut(s)	783, 1474, 1554, 3410, 3445
BtgI	CCRYGG	6 cut(s)	187, 328, 695, 1143, 1406, 1926
BtsCI	GGATG	7 cut(s)	489, 685, 1270, 1276, 2046, 2462, 3149
BtsI	GCAGTG	1 cut(s)	1223
BtsIMutI	CAGTG	5 cut(s)	1223, 1493, 2229, 3337, 3396
BveI	ACCTGC	1 cut(s)	2389
Cac8I	GCNNGC	7 cut(s)	212, 407, 692, 1347, 1455, 2533, 3357
CaiI	CAGNNNCTG	2 cut(s)	1346, 2549
CciI	TCATGA	1 cut(s)	1984
CfoI	GCGC	2 cut(s)	882, 3224
Cfr42I	CCGCGG	2 cut(s)	190, 331
ClaI	ATCGAT	5 cut(s)	783, 1474, 1554, 3410, 3445
CseI	GACGC	3 cut(s)	493, 1241, 2555
DdeI	CTNAG	8 cut(s)	744, 867, 1569, 2136, 2343, 2483, 2760, 3421
DraI	TTTAAA	3 cut(s)	1623, 2704, 2985
DraIII	CACNNNGTG	1 cut(s)	1913
DrdI	GACNNNNNNGTC	2 cut(s)	230, 851
DseDI	GACNNNNNNGTC	2 cut(s)	230, 851
EaeI	YGGCCR	1 cut(s)	594
EagI	CGGCCG	1 cut(s)	594
Eam1104I	CTCTTC	5 cut(s)	251, 476, 804, 891, 2253
EarI	CTCTTC	5 cut(s)	251, 476, 804, 891, 2253
EciI	GGCGGA	2 cut(s)	173, 601
EclXI	CGGCCG	1 cut(s)	594
Eco130I	CCWWGG	5 cut(s)	648, 1143, 1926, 2415, 2795
Eco147I	AGGCCT	1 cut(s)	1816
Eco24I	GRGCYC	3 cut(s)	196, 2768, 2819
Eco31I	GGTCTC	1 cut(s)	1421
Eco47I	GGWCC	6 cut(s)	126, 1194, 1665, 2020, 2799, 3100
Eco52I	CGGCCG	1 cut(s)	594
Eco57I	CTGAAG	2 cut(s)	1229, 1584
EcoNI	CCTNNNNNAGG	1 cut(s)	1673
EcoO109I	RGGNCCY	5 cut(s)	192, 193, 1194, 2764, 2765
EcoRI	GAATTC	2 cut(s)	28, 671
EcoRII	CCWGG	6 cut(s)	830, 1434, 1705, 1811, 1955, 2022
EcoT14I	CCWWGG	5 cut(s)	648, 1143, 1926, 2415, 2795
EcoT22I	ATGCAT	3 cut(s)	1111, 2533, 3361
EcoT38I	GRGCYC	3 cut(s)	196, 2768, 2819
ErhI	CCWWGG	5 cut(s)	648, 1143, 1926, 2415, 2795
Esp3I	CGTCTC	1 cut(s)	595
FalI	AAGNNNNNCTT	2 cut(s)	2082, 2114
FaqI	GGGAC	6 cut(s)	112, 491, 743, 752, 941, 2047
FauI	CCCGC	9 cut(s)	182, 332, 410, 557, 587, 683, 705, 1446, 2419
FauNDI	CATATG	2 cut(s)	1296, 2527
FblI	GTMKAC	2 cut(s)	2784, 2841
FokI	GGATG	7 cut(s)	476, 692, 1277, 1283, 2053, 2469, 3156
FriOI	GRGCYC	3 cut(s)	196, 2768, 2819
FspBI	CTAG	4 cut(s)	393, 983, 2214, 2676
GlaI	GCGC	2 cut(s)	881, 3223
GsaI	CCCAGC	3 cut(s)	340, 1006, 1264
HapII	CCGG	7 cut(s)	789, 1421, 1722, 3004, 3109, 3281, 3451
HgaI	GACGC	3 cut(s)	493, 1241, 2555
HhaI	GCGC	2 cut(s)	882, 3224
Hin1I	GRCGYC	2 cut(s)	504, 1252
Hin6I	GCGC	2 cut(s)	880, 3222
HinP1I	GCGC	2 cut(s)	880, 3222
HincII	GTYRAC	2 cut(s)	637, 2281
HindII	GTYRAC	2 cut(s)	637, 2281
HinfI	GANTC	9 cut(s)	602, 740, 872, 929, 950, 2035, 2306, 2487, 3254
HpaI	GTTAAC	1 cut(s)	2281
HpaII	CCGG	7 cut(s)	789, 1421, 1722, 3004, 3109, 3281, 3451
Hpy166II	GTNNAC	7 cut(s)	61, 637, 685, 2281, 2392, 2785, 2842
Hpy8I	GTNNAC	7 cut(s)	61, 637, 685, 2281, 2392, 2785, 2842
Hpy99I	CGWCG	5 cut(s)	135, 138, 809, 1164, 3171
HpyF3I	CTNAG	8 cut(s)	744, 867, 1569, 2136, 2343, 2483, 2760, 3421
Hsp92I	GRCGYC	2 cut(s)	504, 1252
HspAI	GCGC	2 cut(s)	880, 3222
KspAI	GTTAAC	1 cut(s)	2281
KspI	CCGCGG	2 cut(s)	190, 331
LmnI	GCTCC	5 cut(s)	652, 1450, 2245, 2690, 3433
Lsp1109I	GCAGC	7 cut(s)	330, 607, 1936, 1939, 2334, 2362, 3406
LweI	GCATC	7 cut(s)	1290, 1560, 1990, 2031, 2392, 2707, 3336
MaeI	CTAG	4 cut(s)	393, 983, 2214, 2676
MaeIII	GTNAC	3 cut(s)	1754, 1993, 2293
MbiI	CCGCTC	2 cut(s)	1453, 3428
MflI	RGATCY	3 cut(s)	608, 1120, 2159
MhlI	GDGCHC	7 cut(s)	196, 771, 1459, 1909, 2768, 2819, 3337
MlyI	GAGTC	6 cut(s)	734, 923, 959, 2029, 2300, 3263
MmeI	TCCRAC	5 cut(s)	121, 396, 973, 3129, 3312
Mph1103I	ATGCAT	3 cut(s)	1111, 2533, 3361
MroXI	GAANNNNTTC	1 cut(s)	1443
MseI	TTAA	9 cut(s)	78, 1622, 2235, 2280, 2703, 2984, 3135, 3302, 3475
MslI	CAYNNNNRTG	8 cut(s)	1035, 1332, 1986, 1989, 2457, 2530, 2631, 3248
MspA1I	CMGCKG	4 cut(s)	189, 330, 620, 3091
MspI	CCGG	7 cut(s)	789, 1421, 1722, 3004, 3109, 3281, 3451
MssI	GTTTAAAC	1 cut(s)	1623
Mva1269I	GAATGC	3 cut(s)	1383, 3065, 3359
MvaI	CCWGG	6 cut(s)	832, 1436, 1707, 1813, 1957, 2024
MvnI	CGCG	4 cut(s)	189, 330, 423, 3222
NciI	CCSGG	4 cut(s)	789, 3109, 3281, 3451
NcoI	CCATGG	2 cut(s)	1143, 1926
NdeI	CATATG	2 cut(s)	1296, 2527
NmeAIII	GCCGAG	2 cut(s)	572, 856
NmuCI	GTSAC	2 cut(s)	1754, 1993
NsiI	ATGCAT	3 cut(s)	1111, 2533, 3361
NspI	RCATGY	3 cut(s)	2322, 2535, 3359
PaeI	GCATGC	2 cut(s)	2535, 3359
PagI	TCATGA	1 cut(s)	1984
PceI	AGGCCT	1 cut(s)	1816
PciI	ACATGT	1 cut(s)	2318
PctI	GAATGC	3 cut(s)	1383, 3065, 3359
PdmI	GAANNNNTTC	1 cut(s)	1443
PfeI	GAWTC	3 cut(s)	602, 872, 2487
PflFI	GACNNNGTC	1 cut(s)	3192
PfoI	TCCNGGA	2 cut(s)	2022, 3449
PleI	GAGTC	6 cut(s)	734, 923, 958, 2029, 2300, 3262
PmeI	GTTTAAAC	1 cut(s)	1623
PpsI	GAGTC	6 cut(s)	734, 923, 958, 2029, 2300, 3262
PpuMI	RGGWCCY	1 cut(s)	1194
PscI	ACATGT	1 cut(s)	2318
Psp5II	RGGWCCY	1 cut(s)	1194
Psp6I	CCWGG	6 cut(s)	830, 1434, 1705, 1811, 1955, 2022
PspFI	CCCAGC	3 cut(s)	336, 1002, 1260
PspGI	CCWGG	6 cut(s)	830, 1434, 1705, 1811, 1955, 2022
PspOMI	GGGCCC	2 cut(s)	192, 2764
PspPPI	RGGWCCY	1 cut(s)	1194
PstI	CTGCAG	2 cut(s)	625, 2352
PstNI	CAGNNNCTG	2 cut(s)	1346, 2549
PsuI	RGATCY	3 cut(s)	608, 1120, 2159
PsyI	GACNNNGTC	1 cut(s)	3192
RseI	CAYNNNNRTG	8 cut(s)	1035, 1332, 1986, 1989, 2457, 2530, 2631, 3248
SacII	CCGCGG	2 cut(s)	190, 331
SaqAI	TTAA	9 cut(s)	78, 1622, 2235, 2280, 2703, 2984, 3135, 3302, 3475
ScaI	AGTACT	3 cut(s)	815, 1842, 2094
SchI	GAGTC	6 cut(s)	734, 923, 959, 2029, 2300, 3263
SduI	GDGCHC	7 cut(s)	196, 771, 1459, 1909, 2768, 2819, 3337
SfaNI	GCATC	7 cut(s)	1290, 1560, 1990, 2031, 2392, 2707, 3336
SfcI	CTRYAG	2 cut(s)	621, 2348
Sfr303I	CCGCGG	2 cut(s)	190, 331
SgrBI	CCGCGG	2 cut(s)	190, 331
SinI	GGWCC	6 cut(s)	126, 1194, 1665, 2020, 2799, 3100
SmiI	ATTTAAAT	1 cut(s)	2985
SmiMI	CAYNNNNRTG	8 cut(s)	1035, 1332, 1986, 1989, 2457, 2530, 2631, 3248
SmlI	CTYRAG	1 cut(s)	1844
SmoI	CTYRAG	1 cut(s)	1844
SphI	GCATGC	2 cut(s)	2535, 3359
SseBI	AGGCCT	1 cut(s)	1816
SspI	AATATT	2 cut(s)	2370, 2970
SspMI	CTAG	4 cut(s)	393, 983, 2214, 2676
StuI	AGGCCT	1 cut(s)	1816
StyI	CCWWGG	5 cut(s)	648, 1143, 1926, 2415, 2795
SwaI	ATTTAAAT	1 cut(s)	2985
TaqII	GACCGA	4 cut(s)	115, 236, 2816, 3088
TatI	WGTACW	5 cut(s)	813, 1497, 1840, 2092, 2670
TauI	GCSGC	8 cut(s)	189, 330, 333, 336, 599, 617, 620, 3428
TfiI	GAWTC	3 cut(s)	602, 872, 2487
Tru1I	TTAA	9 cut(s)	78, 1622, 2235, 2280, 2703, 2984, 3135, 3302, 3475
Tru9I	TTAA	9 cut(s)	78, 1622, 2235, 2280, 2703, 2984, 3135, 3302, 3475
TscAI	CASTG	5 cut(s)	1230, 1500, 2229, 3337, 3396
TseFI	GTSAC	2 cut(s)	1754, 1993
TseI	GCWGC	7 cut(s)	318, 620, 1949, 1952, 2347, 2350, 3394
Tsp45I	GTSAC	2 cut(s)	1754, 1993
TspGWI	ACGGA	4 cut(s)	1113, 1148, 1395, 3339
TspRI	CASTG	5 cut(s)	1230, 1500, 2229, 3337, 3396
Tth111I	GACNNNGTC	1 cut(s)	3192
VpaK11BI	GGWCC	6 cut(s)	126, 1194, 1665, 2020, 2799, 3100
XagI	CCTNNNNNAGG	1 cut(s)	1673
XapI	RAATTY	6 cut(s)	28, 671, 961, 1234, 2867, 3261
XceI	RCATGY	3 cut(s)	2322, 2535, 3359
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1963, 1985, 2802
XmiI	GTMKAC	2 cut(s)	2784, 2841
XmnI	GAANNNNTTC	1 cut(s)	1443
XspI	CTAG	4 cut(s)	393, 983, 2214, 2676
ZrmI	AGTACT	3 cut(s)	815, 1842, 2094
Zsp2I	ATGCAT	3 cut(s)	1111, 2533, 3361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.