pycom11g01430

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0003448
Physical Location & Seq
Reverse (-)
1228526 .. 1230311
1786 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1419 bp
ATGGGAACTGAAATTATTCCCACTCATATGTTTCTTGTGTGTTTTCCAGGACAGGGACACATAAACCCTATGCTCAGATTAGGCAAACGCCTAGCTGCAAAGGGGTTTTTGGTCAGCTTCTCCACCACTGAAAACTTTGGCAAAGAGATGAGAGCAGCCAACAGTGGCATCAGTGATGAACCCACACCCGTCGGCGATGGTTTTATCAGGTTTGAGTTTTTTGACGACGGTCTTACAGAACAGGACCCTAAACGCACGGACTTCGACTACTATGTGCCACTGCTTGAACTTGTGGGCAAGGATTTGGTAACCCAGATAATCAAACGGCATGCCAATGAAGGTCGTCCAGTTTCATGCCTTGTGAACAACCCATTCATTCCATGGGTTTGTGACATTGGCACTGAGCTTGGAATCCCTTGTGCCACGCTTTGGGTTCAGTCGTGTGCTGTGTTCTCGGCTTATTACCATTATCACAGCAAGACAGTGCCATTTCCGACAGAAACCGAGCCAAACTTGGATGTTCAGCTGCCAAGTATGCCACTTTTGAAGCACGATGAGATACCCAGCTTCTTGCACCCTTCCGACCGATTTCAGGTTTTTGGGAGGGCGATTTTAGGCCAGTTCAAGAAGTTATCAAAATCAATGTATGTGTTGATAGACACGTTCCAAGAGCTCGAGCCAGAGGTCATCGAGCACATGTCCCAGTTCTGCATAGTGAAGCCCGTTGGCCCCTTATTCAAGAACCCAAAACCTCCCAAAACAACCATAAGTGGAGACCTAATGAAAGCTGATGATTGTCTTGAGTGGCTCGATTCCAAGCCTCCAACATCTGTTGTATACATCTCTTTTGGTAGTCTTGTGTACTTAAAGCAAGAACAAGTTGATGAGATTGCTCATGGATTATTGAGCTCTGGAGTCTCATTTTTATGGGTTATGAAGCCACCCAGCAAAGCGTTTGGATTCAAAGAACATGTTTTACCTGATAAGTTCTTAGAAAAAGTTGGAGATAAAGGAAAAGTGGTGAAATGGAGTCCACAAGAACAGGTTTTAGCTCACCCATCTGTCGCATGTTTTGTAACTCACTGTGGCTGGAACTCTTCAGTTGAAGCACTCACTTCAGGCGTGCCAGTTGTGACATTTCCTCAGTGGGGTGACCAAGTCACCAATGCAAAGTTCTTAGTGGATGTGTTTGGTGTAGGGCTTAGATTGAGCCGTGGGGTGGCTGAGAATAGATTGAGCATGAGAGACGAGGTGGGGAAGTGTTTGTTGGAGGCAACAGTTGGACAGAGGGCAATAGAATTGAAGCAAAACGCATTGAAATGGAAGCTGGCAGCGGAGGCGGCGGTGGCTGAGGGCTGCTCCTCCGACCAGAATCTTCAAGATTTTCTGGATGAGATTAGTAAGACCTGTGCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

473

Amino Acids

52.43

Weight (kDa)

5.7

Isoelectric Point (pI)

37.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 267 - 396 3.5e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 429
AccI GTMKAC 1 cut(s) 837
AciI CCGC 3 cut(s) 1334, 1340, 1343
AcuI CTGAAG 2 cut(s) 1083, 1101
AfaI GTAC 1 cut(s) 863
AfiI CCNNNNNNNGG 5 cut(s) 53, 429, 592, 1148, 1219
AflIII ACRYGT 3 cut(s) 660, 696, 970
AgsI TTSAA 9 cut(s) 287, 547, 625, 739, 964, 1106, 1303, 1318, 1379
AjnI CCWGG 1 cut(s) 46
AjuI GAANNNNNNNTTGG 4 cut(s) 1157, 1189, 1250, 1282
Alw21I GWGCWC 3 cut(s) 675, 696, 911
Alw26I GTCTC 3 cut(s) 768, 922, 1239
Ama87I CYCGRG 1 cut(s) 674
AoxI GGCC 2 cut(s) 616, 727
ApeKI GCWGC 6 cut(s) 95, 155, 526, 1331, 1356, 1412
Asp700I GAANNNNTTC 1 cut(s) 15
AspS9I GGNCC 2 cut(s) 244, 728
AsuHPI GGTGA 4 cut(s) 1033, 1046, 1153, 1163
AvaI CYCGRG 1 cut(s) 674
AvaII GGWCC 1 cut(s) 244
BanII GRGCYC 2 cut(s) 675, 911
Bbv12I GWGCWC 3 cut(s) 675, 696, 911
BbvCI CCTCAGC 1 cut(s) 1350
BbvI GCAGC 6 cut(s) 82, 167, 513, 1343, 1343, 1399
BccI CCATC 2 cut(s) 191, 1066
BceAI ACGGC 2 cut(s) 341, 1197
BcgI CGANNNNNNTGC 2 cut(s) 244, 278
BciT130I CCWGG 1 cut(s) 48
BcoDI GTCTC 3 cut(s) 768, 922, 1239
BfaI CTAG 1 cut(s) 92
BisI GCNGC 7 cut(s) 96, 156, 527, 1332, 1341, 1357, 1413
BlsI GCNGC 7 cut(s) 97, 157, 528, 1333, 1342, 1358, 1414
Bme1390I CCNGG 1 cut(s) 48
Bme18I GGWCC 1 cut(s) 244
BmeT110I CYCGRG 1 cut(s) 674
BmgT120I GGNCC 2 cut(s) 244, 728
BmiI GGNNCC 2 cut(s) 246, 730
BmrFI CCNGG 1 cut(s) 48
BmrI ACTGGG 1 cut(s) 697
BmsI GCATC 1 cut(s) 177
BmuI ACTGGG 1 cut(s) 697
BoxI GACNNNNGTC 1 cut(s) 228
BplI GAGNNNNNCTC 2 cut(s) 1343, 1375
BpmI CTGGAG 1 cut(s) 933
Bpu10I CCTNAGC 1 cut(s) 1350
BpuEI CTTGAG 1 cut(s) 821
BsaI GGTCTC 1 cut(s) 768
BsaJI CCNNGG 2 cut(s) 380, 1213
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 429, 592, 1148, 1219
Bse1I ACTGG 4 cut(s) 347, 619, 703, 1127
BseBI CCWGG 1 cut(s) 48
BseDI CCNNGG 2 cut(s) 380, 1213
BseGI GGATG 3 cut(s) 523, 1189, 1396
BseLI CCNNNNNNNGG 5 cut(s) 53, 429, 592, 1148, 1219
BseMII CTCAG 5 cut(s) 88, 393, 1157, 1215, 1341
BseNI ACTGG 4 cut(s) 347, 619, 703, 1127
BseRI GAGGAG 1 cut(s) 1351
BseXI GCAGC 6 cut(s) 82, 167, 513, 1343, 1343, 1399
BseYI CCCAGC 2 cut(s) 563, 944
Bsh1285I CGRYCG 1 cut(s) 586
BshFI GGCC 2 cut(s) 618, 729
BsiEI CGRYCG 1 cut(s) 586
BsiHKAI GWGCWC 3 cut(s) 675, 696, 911
BsiHKCI CYCGRG 1 cut(s) 674
BslFI GGGAC 2 cut(s) 69, 685
BslI CCNNNNNNNGG 5 cut(s) 53, 429, 592, 1148, 1219
BsmAI GTCTC 3 cut(s) 768, 922, 1239
BsmBI CGTCTC 1 cut(s) 1239
BsmFI GGGAC 2 cut(s) 69, 685
BsnI GGCC 2 cut(s) 618, 729
Bso31I GGTCTC 1 cut(s) 768
BsoBI CYCGRG 1 cut(s) 674
Bsp1286I GDGCHC 3 cut(s) 675, 696, 911
Bsp19I CCATGG 1 cut(s) 380
BspACI CCGC 3 cut(s) 1334, 1340, 1343
BspANI GGCC 2 cut(s) 618, 729
BspCNI CTCAG 5 cut(s) 87, 394, 1156, 1216, 1342
BspLI GGNNCC 2 cut(s) 246, 730
BspTNI GGTCTC 1 cut(s) 768
BsrI ACTGG 4 cut(s) 347, 619, 703, 1127
BssECI CCNNGG 2 cut(s) 380, 1213
BssNAI GTATAC 1 cut(s) 838
BssT1I CCWWGG 1 cut(s) 380
Bst1107I GTATAC 1 cut(s) 838
Bst2UI CCWGG 1 cut(s) 48
Bst4CI ACNGT 5 cut(s) 164, 230, 484, 1085, 1279
Bst6I CTCTTC 1 cut(s) 1102
BstC8I GCNNGC 3 cut(s) 330, 1124, 1329
BstDEI CTNAG 8 cut(s) 74, 402, 991, 1143, 1177, 1202, 1224, 1350
BstDSI CCRYGG 2 cut(s) 380, 1213
BstEII GGTNACC 2 cut(s) 307, 1151
BstF5I GGATG 3 cut(s) 523, 1189, 1396
BstMAI GTCTC 3 cut(s) 768, 922, 1239
BstMCI CGRYCG 1 cut(s) 586
BstMWI GCNNNNNNNGC 4 cut(s) 535, 1337, 1340, 1346
BstNI CCWGG 1 cut(s) 48
BstNSI RCATGY 4 cut(s) 332, 700, 974, 1071
BstPAI GACNNNNGTC 1 cut(s) 228
BstPI GGTNACC 2 cut(s) 307, 1151
BstSCI CCNGG 1 cut(s) 46
BstV1I GCAGC 6 cut(s) 82, 167, 513, 1343, 1343, 1399
BstZ17I GTATAC 1 cut(s) 838
BsuRI GGCC 2 cut(s) 618, 729
BtgI CCRYGG 2 cut(s) 380, 1213
BtgZI GCGATG 1 cut(s) 210
BtsCI GGATG 3 cut(s) 523, 1189, 1396
BtsI GCAGTG 1 cut(s) 278
BtsIMutI CAGTG 8 cut(s) 126, 169, 178, 278, 399, 489, 1081, 1151
Cac8I GCNNGC 3 cut(s) 330, 1124, 1329
Cfr13I GGNCC 2 cut(s) 244, 728
Csp6I GTAC 1 cut(s) 862
CviAII CATG 8 cut(s) 329, 354, 381, 697, 896, 971, 1068, 1240
CviQI GTAC 1 cut(s) 862
DdeI CTNAG 8 cut(s) 74, 402, 991, 1143, 1177, 1202, 1224, 1350
Eam1104I CTCTTC 1 cut(s) 1102
EarI CTCTTC 1 cut(s) 1102
Ecl136II GAGCTC 2 cut(s) 673, 909
Eco130I CCWWGG 1 cut(s) 380
Eco24I GRGCYC 2 cut(s) 675, 911
Eco31I GGTCTC 1 cut(s) 768
Eco47I GGWCC 1 cut(s) 244
Eco53kI GAGCTC 2 cut(s) 673, 909
Eco57I CTGAAG 2 cut(s) 1083, 1101
Eco88I CYCGRG 1 cut(s) 674
Eco91I GGTNACC 2 cut(s) 307, 1151
EcoICRI GAGCTC 2 cut(s) 673, 909
EcoO109I RGGNCCY 1 cut(s) 244
EcoO65I GGTNACC 2 cut(s) 307, 1151
EcoRII CCWGG 1 cut(s) 46
EcoT14I CCWWGG 1 cut(s) 380
EcoT38I GRGCYC 2 cut(s) 675, 911
ErhI CCWWGG 1 cut(s) 380
Esp3I CGTCTC 1 cut(s) 1239
FaeI CATG 8 cut(s) 332, 357, 384, 700, 899, 974, 1071, 1243
FaqI GGGAC 2 cut(s) 69, 685
FatI CATG 8 cut(s) 328, 353, 380, 696, 895, 970, 1067, 1239
FauNDI CATATG 1 cut(s) 27
FblI GTMKAC 1 cut(s) 837
Fnu4HI GCNGC 7 cut(s) 96, 156, 527, 1332, 1341, 1357, 1413
FokI GGATG 3 cut(s) 530, 1196, 1403
FriOI GRGCYC 2 cut(s) 675, 911
Fsp4HI GCNGC 7 cut(s) 96, 156, 527, 1332, 1341, 1357, 1413
FspBI CTAG 1 cut(s) 92
GluI GCNGC 7 cut(s) 96, 156, 527, 1332, 1341, 1357, 1413
GsaI CCCAGC 2 cut(s) 567, 948
GsuI CTGGAG 1 cut(s) 933
HaeIII GGCC 2 cut(s) 618, 729
Hin1II CATG 8 cut(s) 332, 357, 384, 700, 899, 974, 1071, 1243
HinfI GANTC 6 cut(s) 411, 812, 915, 960, 1030, 1372
HphI GGTGA 4 cut(s) 1033, 1046, 1153, 1163
Hpy166II GTNNAC 4 cut(s) 364, 838, 862, 1034
Hpy188I TCNGA 4 cut(s) 77, 495, 583, 1366
Hpy188III TCNNGA 6 cut(s) 625, 739, 800, 912, 1379, 1388
Hpy8I GTNNAC 4 cut(s) 364, 838, 862, 1034
Hpy99I CGWCG 2 cut(s) 194, 230
HpyAV CCTTC 2 cut(s) 332, 588
HpyCH4III ACNGT 5 cut(s) 164, 230, 484, 1085, 1279
HpyCH4IV ACGT 1 cut(s) 662
HpyCH4V TGCA 4 cut(s) 98, 574, 711, 1169
HpyF10VI GCNNNNNNNGC 4 cut(s) 535, 1337, 1340, 1346
HpyF3I CTNAG 8 cut(s) 74, 402, 991, 1143, 1177, 1202, 1224, 1350
HpySE526I ACGT 1 cut(s) 662
Hsp92II CATG 8 cut(s) 332, 357, 384, 700, 899, 974, 1071, 1243
LmnI GCTCC 1 cut(s) 1364
Lsp1109I GCAGC 6 cut(s) 82, 167, 513, 1343, 1343, 1399
LweI GCATC 1 cut(s) 177
MaeI CTAG 1 cut(s) 92
MaeII ACGT 1 cut(s) 662
MaeIII GTNAC 6 cut(s) 307, 389, 1075, 1132, 1151, 1159
MboII GAAGA 2 cut(s) 1089, 1367
MhlI GDGCHC 3 cut(s) 675, 696, 911
MluCI AATT 2 cut(s) 12, 1298
MlyI GAGTC 2 cut(s) 924, 1039
MmeI TCCRAC 7 cut(s) 518, 606, 848, 982, 1248, 1261, 1389
MroXI GAANNNNTTC 1 cut(s) 15
MseI TTAA 2 cut(s) 866, 1417
MslI CAYNNNNRTG 4 cut(s) 26, 333, 925, 1318
MspA1I CMGCKG 2 cut(s) 526, 1334
MspR9I CCNGG 1 cut(s) 48
MvaI CCWGG 1 cut(s) 48
MwoI GCNNNNNNNGC 4 cut(s) 535, 1337, 1340, 1346
NcoI CCATGG 1 cut(s) 380
NdeI CATATG 1 cut(s) 27
NlaIII CATG 8 cut(s) 332, 357, 384, 700, 899, 974, 1071, 1243
NlaIV GGNNCC 2 cut(s) 246, 730
NmeAIII GCCGAG 1 cut(s) 434
NmuCI GTSAC 4 cut(s) 389, 1132, 1151, 1159
NspI RCATGY 4 cut(s) 332, 700, 974, 1071
PaeI GCATGC 1 cut(s) 332
PaeR7I CTCGAG 1 cut(s) 674
PciI ACATGT 2 cut(s) 696, 970
PdmI GAANNNNTTC 1 cut(s) 15
PfeI GAWTC 4 cut(s) 411, 812, 960, 1372
PflFI GACNNNGTC 1 cut(s) 1157
PflMI CCANNNNNTGG 1 cut(s) 429
PfoI TCCNGGA 1 cut(s) 46
PkrI GCNGC 7 cut(s) 97, 157, 528, 1333, 1342, 1358, 1414
PleI GAGTC 2 cut(s) 923, 1038
PpsI GAGTC 2 cut(s) 923, 1038
PpuMI RGGWCCY 1 cut(s) 244
PscI ACATGT 2 cut(s) 696, 970
PshAI GACNNNNGTC 1 cut(s) 228
Psp124BI GAGCTC 2 cut(s) 675, 911
Psp5II RGGWCCY 1 cut(s) 244
Psp6I CCWGG 1 cut(s) 46
PspEI GGTNACC 2 cut(s) 307, 1151
PspFI CCCAGC 2 cut(s) 563, 944
PspGI CCWGG 1 cut(s) 46
PspN4I GGNNCC 2 cut(s) 246, 730
PspPI GGNCC 2 cut(s) 244, 728
PspPPI RGGWCCY 1 cut(s) 244
PspXI VCTCGAGB 1 cut(s) 674
PsrI GAACNNNNNNTAC 2 cut(s) 960, 992
PsyI GACNNNGTC 1 cut(s) 1157
PvuII CAGCTG 1 cut(s) 526
RsaI GTAC 1 cut(s) 863
RsaNI GTAC 1 cut(s) 862
RseI CAYNNNNRTG 4 cut(s) 26, 333, 925, 1318
SacI GAGCTC 2 cut(s) 675, 911
SaqAI TTAA 2 cut(s) 866, 1417
SatI GCNGC 7 cut(s) 96, 156, 527, 1332, 1341, 1357, 1413
Sau96I GGNCC 2 cut(s) 244, 728
SchI GAGTC 2 cut(s) 924, 1039
ScrFI CCNGG 1 cut(s) 48
SduI GDGCHC 3 cut(s) 675, 696, 911
SfaNI GCATC 1 cut(s) 177
Sfr274I CTCGAG 1 cut(s) 674
SinI GGWCC 1 cut(s) 244
SlaI CTCGAG 1 cut(s) 674
SmiMI CAYNNNNRTG 4 cut(s) 26, 333, 925, 1318
SmlI CTYRAG 2 cut(s) 674, 800
SmoI CTYRAG 2 cut(s) 674, 800
SphI GCATGC 1 cut(s) 332
Sse9I AATT 2 cut(s) 12, 1298
SsiI CCGC 3 cut(s) 1334, 1340, 1343
SspMI CTAG 1 cut(s) 92
SstI GAGCTC 2 cut(s) 675, 911
StyD4I CCNGG 1 cut(s) 46
StyI CCWWGG 1 cut(s) 380
TaaI ACNGT 5 cut(s) 164, 230, 484, 1085, 1279
TaiI ACGT 1 cut(s) 665
TaqI TCGA 4 cut(s) 264, 675, 690, 810
TaqII GACCGA 1 cut(s) 600
TasI AATT 2 cut(s) 12, 1298
TatI WGTACW 1 cut(s) 861
TauI GCSGC 1 cut(s) 1343
TfiI GAWTC 4 cut(s) 411, 812, 960, 1372
Tru1I TTAA 2 cut(s) 866, 1417
Tru9I TTAA 2 cut(s) 866, 1417
TscAI CASTG 8 cut(s) 133, 169, 178, 285, 406, 489, 1088, 1151
TseFI GTSAC 4 cut(s) 389, 1132, 1151, 1159
TseI GCWGC 6 cut(s) 95, 155, 526, 1331, 1356, 1412
Tsp45I GTSAC 4 cut(s) 389, 1132, 1151, 1159
TspDTI ATGAA 6 cut(s) 192, 342, 351, 364, 797, 950
TspGWI ACGGA 1 cut(s) 272
TspRI CASTG 8 cut(s) 133, 169, 178, 285, 406, 489, 1088, 1151
Tth111I GACNNNGTC 1 cut(s) 1157
Van91I CCANNNNNTGG 1 cut(s) 429
VpaK11BI GGWCC 1 cut(s) 244
XceI RCATGY 4 cut(s) 332, 700, 974, 1071
XcmI CCANNNNNNNNNTGG 1 cut(s) 378
XhoI CTCGAG 1 cut(s) 674
XmiI GTMKAC 1 cut(s) 837
XmnI GAANNNNTTC 1 cut(s) 15
XspI CTAG 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.