Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0010237

Physical Location & Seq

Genomic Coordinates Forward (+)

3682992 .. 3686232

Gene Structure 3241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGCATATAAAAAAATGCCGCAGCGAGAAATTTACTTCAGTTATGTTTCCAAAAAATTCAAAATTCATAGTGAGAAATATTGGATTAATTGGATTCACTTATTATTTTTTCTTGTCCGGAGTGAAAATGGACCTTTCACTAGTGAAAAGGACAAATAAGAAACAATTGTACATGGCATTTGCTGGAGTGCTCCTCCCCTTCATAGTTATATCAATTGTTGCATTCAGTTTGCGCAAGTCCATGGACAAAGAACTAGCTAGAATTTCTTCACTTGGATTCATTTCCTCCGGCTTGGCCCTACCGTTGTTTCCTGTCATCCACGCCATCCTCAAAGAGCTCAACCTTCTGAGCTCTGAGATCGGACGTCTGGCATTGTCGATATCGGTGATCAGCGATGCGATTGGAGGGTGTATAATAGTTTTATTTGAGGCAGCTAAGCAAGGTGAGGGCAACCACCTGGCTGTGTTATGGTACTTGATTTCTGTGGTTGTTTTTGTGGCCTTCATTGTGTTTGTGATTAGAAGGAGTTTGTTGAGAGTTGCTGAGACCACCCCAGAGGGGCAACCAGTGGACCAAGCATATGTGGTGTCGATTTTGTTGGGGGTTTTAGTGATGGGATGTTTGGGTGACATCTCTGGGATCACGATTGTAAACGGTGCGTTCTGGTTGGGTTTCGCGATCCCGGATGGCCCTCCGCTTGGATCAACAATTGTAGAGAGGAGTGAGATGGTTATAGTGGATGTTTTGATGCCATTTTCTTTTGCAATGGTTGGGCTTTCTGTGGATGTGAATGCCATGAGCTCTGTTGGTTGGTCAAGCTTGAGTCCCTTGTTTGCCATCATTGCGACTGCCTATGTGGCCAAGTTGCTTGGAACACTAATCACTTCTGCCTTCTTTGAGTTGCCACTCAGAGATGGTGTTACGCTCAGCTTCATGATGATCCTAAAAGGTCAAGTGGAGATAGTGGTTTTACTCCACTGGATGGACAAAAAGATAATGGCGATTCCAGGGTTTACAATGATGGTGATATCCATCACTACAATGACTGCAATAGCCACGCCCTTGATCAGCATCCTCTATGACCCAACAAGGCCATACATGGTCCATAAAAGGAGAACCATCCAGCACACTCCTCTGGAGGAAGCAGAACTTCGCATAGTCCTATGTATATATGATGAAGATAGCATAGCTGCCCTCATAAACCTTCTTGAAATCTCCAATCCAACTCTAAGCACCCCGTTCGTAATCTTTTCTCTCCATCTCGTCGACCTTGTTGGCCGGGCTTGTCCTGTGCTTATGGACCATGAAAAGCAGGAAGAGCAAGATTCAAAATATGCAGTTTGTCACACAATTCACAATGTCTTAAAGCAATACCAAGAAACCAAAGGTGAGTGTGTTAGGCTCCATCCCTTCACAGCTATAGTGCCAAACAAAACAATGTATCAAGACATTTGTGACCTAGCTCTTGTGAAAAAGGCCACACTTATAATTTTGCCTTTTCATAAAGAGTGTTTGGATACTCTTGGAGGACAATTAACAGAAATTGTGAGGCATGGGGTTAGATCCGTCAATTCAAATGTGTTAGCCCATGCACCTTGCTCAGTTGGAGTTCTGGTTGACAAGGGTCATGTCAACCAACTGGCATTAAGGAACACCGAGCTACATTTTGCCGTGCTATTTTTGGGCGGAGCAGATTCTAGGGAGGCATTGTGTTATGCAGATAGGATGGCTGGAAAATTCAATGTGTCACTGACTGTGATTCGGTTTCTTTCACCCAATTCTGAAGGTGATGATGAGATGGAGAAGAAGTTGGATGATGGGGTTGTGACATGGTTTTGGATGAAGAATGAGAGGAATGAGAGGGTGAATTATAAAGAGGTGGTGGTGAGGAATGGGGAAGAGACAATCTCAGCCATTCAATCAATGAATGATGATAATGAAAATAATTATGACCTTTGGATTGTGGGGAGGAAACAAGGGATCAATCCTGTGCTTTTATCCGGGCTATCATGTTGGAGTGAGAATGGTGAGTTGGGAATAATTGGGGACTATATTTCCTCTCTTGATTTTTGTTGTACTGCTTCTGTGTTAGTGGTACAGCAGCAGACTTTGAGAGGGCAAGGGTCAGATAGTACAAGTGGAAGGTTTGCATGTAACCCTAGCCCTACCCAGAAGGTGAAGGATTTGTTAATTTCATGGTGTTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

736

Amino Acids

81.3

Weight (kDa)

6.27

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	22 - 358	6.6e-32	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	414 - 543	2.6e-11	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	555 - 703	2.2e-11	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37060 AT5G58460
fragaria_vesca	FvH4_3g39730
malus_domestica	MD03G1056200.v1.1 MD11G1057100.v1.1 MD11G1057400.v1.1
prunus_persica	Prupe.6G048600_v2.0.a1
pyrus_communis	pycom11g04800 pycom11g04810
rosa_chinensis	RchiOBHm_Chr5g0071611
rosa_laevigata	RLG00000036229
rosa_multiflora	Rmu_sc0005745.1_g000024
rosa_roxburghii	Rroxscaffold_1G00009570
rosa_rugosa	Rorug05G0413600 Rorug05G0413600 Rorug05G0413600
rosa_samantha	Rh5AG469500 Rh5BG488900 Rh5CG512800 Rh5DG499500
rosa_wichuraiana	Rw5G043620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1487, 1872
AatII	GACGTC	1 cut(s)	367
Acc16I	TGCGCA	1 cut(s)	233
AccB7I	CCANNNNNTGG	1 cut(s)	982
AccI	GTMKAC	1 cut(s)	1266
AccII	CGCG	1 cut(s)	677
AccIII	TCCGGA	1 cut(s)	116
AciI	CCGC	3 cut(s)	19, 695, 1686
AclWI	GGATC	6 cut(s)	647, 673, 709, 934, 1557, 1988
AcoI	YGGCCR	2 cut(s)	858, 1276
AcsI	RAATTY	5 cut(s)	29, 55, 62, 261, 1736
AcuI	CTGAAG	2 cut(s)	21, 1803
AcyI	GRCGYC	1 cut(s)	364
AfaI	GTAC	5 cut(s)	170, 473, 2077, 2097, 2134
AfiI	CCNNNNNNNGG	3 cut(s)	558, 698, 982
AgsI	TTSAA	6 cut(s)	60, 1211, 1329, 1575, 1741, 1919
AhlI	ACTAGT	1 cut(s)	139
AjnI	CCWGG	2 cut(s)	456, 1006
AjuI	GAANNNNNNNTTGG	2 cut(s)	2015, 2047
Alw21I	GWGCWC	4 cut(s)	192, 339, 353, 803
Alw26I	GTCTC	2 cut(s)	539, 1895
AlwI	GGATC	6 cut(s)	647, 673, 709, 934, 1557, 1988
Aor13HI	TCCGGA	1 cut(s)	116
AoxI	GGCC	7 cut(s)	294, 498, 688, 858, 1091, 1276, 1476
ApeKI	GCWGC	4 cut(s)	21, 431, 1190, 2101
ApoI	RAATTY	5 cut(s)	29, 55, 62, 261, 1736
AseI	ATTAAT	1 cut(s)	86
Asp700I	GAANNNNTTC	1 cut(s)	265
AspLEI	GCGC	1 cut(s)	234
AspS9I	GGNCC	6 cut(s)	130, 295, 571, 689, 1102, 1300
AsuC2I	CCSGG	3 cut(s)	683, 1280, 2002
AvaII	GGWCC	4 cut(s)	130, 571, 1102, 1300
BalI	TGGCCA	1 cut(s)	860
BanII	GRGCYC	3 cut(s)	339, 353, 803
Bbv12I	GWGCWC	4 cut(s)	192, 339, 353, 803
BbvI	GCAGC	4 cut(s)	33, 443, 1177, 2113
BceAI	ACGGC	1 cut(s)	1655
BcgI	CGANNNNNNTGC	2 cut(s)	1222, 1256
BciT130I	CCWGG	2 cut(s)	458, 1008
BciVI	GTATCC	1 cut(s)	1510
BclI	TGATCA	2 cut(s)	387, 1065
BcnI	CCSGG	3 cut(s)	683, 1280, 2002
BcoDI	GTCTC	2 cut(s)	539, 1895
BcuI	ACTAGT	1 cut(s)	139
BfaI	CTAG	6 cut(s)	140, 254, 258, 1460, 1698, 2160
BfmI	CTRYAG	1 cut(s)	1419
BfuI	GTATCC	1 cut(s)	1510
BglI	GCCNNNNNGGC	1 cut(s)	857
BisI	GCNGC	5 cut(s)	19, 22, 432, 1191, 2102
BlpI	GCTNAGC	2 cut(s)	435, 926
BlsI	GCNGC	5 cut(s)	20, 23, 433, 1192, 2103
Bme1390I	CCNGG	5 cut(s)	458, 683, 1008, 1280, 2002
Bme18I	GGWCC	4 cut(s)	130, 571, 1102, 1300
BmgT120I	GGNCC	6 cut(s)	130, 295, 571, 689, 1102, 1300
BmiI	GGNNCC	1 cut(s)	1403
BmrFI	CCNGG	5 cut(s)	458, 683, 1008, 1280, 2002
BmsI	GCATC	3 cut(s)	385, 738, 1080
BoxI	GACNNNNGTC	1 cut(s)	1623
BplI	GAGNNNNNCTC	4 cut(s)	177, 209, 1892, 1924
BpmI	CTGGAG	2 cut(s)	204, 1157
Bpu1102I	GCTNAGC	2 cut(s)	435, 926
BpuEI	CTTGAG	1 cut(s)	841
BpuMI	CCSGG	3 cut(s)	683, 1280, 2002
BsaBI	GATNNNNATC	2 cut(s)	1031, 1070
BsaHI	GRCGYC	1 cut(s)	364
BsaI	GGTCTC	1 cut(s)	539
BsaJI	CCNNGG	2 cut(s)	240, 1007
BsaWI	WCCGGW	1 cut(s)	116
BsaXI	ACNNNNNCTCC	6 cut(s)	1599, 1629, 1694, 1724, 1793, 1823
Bsc4I	CCNNNNNNNGG	3 cut(s)	558, 698, 982
Bse1I	ACTGG	3 cut(s)	566, 983, 1644
Bse3DI	GCAATG	2 cut(s)	771, 840
Bse8I	GATNNNNATC	2 cut(s)	1031, 1070
BseAI	TCCGGA	1 cut(s)	116
BseBI	CCWGG	2 cut(s)	458, 1008
BseDI	CCNNGG	2 cut(s)	240, 1007
BseJI	GATNNNNATC	2 cut(s)	1031, 1070
BseLI	CCNNNNNNNGG	3 cut(s)	558, 698, 982
BseMI	GCAATG	2 cut(s)	771, 840
BseMII	CTCAG	7 cut(s)	338, 345, 534, 922, 940, 1614, 1923
BseNI	ACTGG	3 cut(s)	566, 983, 1644
BseRI	GAGGAG	3 cut(s)	182, 733, 1122
BseXI	GCAGC	4 cut(s)	33, 443, 1177, 2113
Bsh1236I	CGCG	1 cut(s)	677
BshFI	GGCC	7 cut(s)	296, 500, 690, 860, 1093, 1278, 1478
BsiHKAI	GWGCWC	4 cut(s)	192, 339, 353, 803
BsiSI	CCGG	5 cut(s)	117, 288, 683, 1279, 2001
BslFI	GGGAC	2 cut(s)	810, 2060
BslI	CCNNNNNNNGG	3 cut(s)	558, 698, 982
BsmAI	GTCTC	2 cut(s)	539, 1895
BsmFI	GGGAC	2 cut(s)	810, 2060
BsmI	GAATGC	2 cut(s)	221, 796
BsnI	GGCC	7 cut(s)	296, 500, 690, 860, 1093, 1278, 1478
Bso31I	GGTCTC	1 cut(s)	539
Bsp1286I	GDGCHC	4 cut(s)	192, 339, 353, 803
Bsp13I	TCCGGA	1 cut(s)	116
Bsp1407I	TGTACA	1 cut(s)	168
Bsp143I	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
Bsp1720I	GCTNAGC	2 cut(s)	435, 926
Bsp19I	CCATGG	1 cut(s)	240
Bsp68I	TCGCGA	1 cut(s)	677
BspACI	CCGC	3 cut(s)	19, 695, 1686
BspANI	GGCC	7 cut(s)	296, 500, 690, 860, 1093, 1278, 1478
BspCNI	CTCAG	7 cut(s)	339, 346, 535, 921, 939, 1613, 1922
BspEI	TCCGGA	1 cut(s)	116
BspFNI	CGCG	1 cut(s)	677
BspHI	TCATGA	1 cut(s)	933
BspLI	GGNNCC	1 cut(s)	1403
BspPI	GGATC	6 cut(s)	647, 673, 709, 934, 1557, 1988
BspQI	GCTCTTC	1 cut(s)	1311
BspTNI	GGTCTC	1 cut(s)	539
BsrDI	GCAATG	2 cut(s)	771, 840
BsrGI	TGTACA	1 cut(s)	168
BsrI	ACTGG	3 cut(s)	566, 983, 1644
BssECI	CCNNGG	2 cut(s)	240, 1007
BssMI	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
BssNI	GRCGYC	1 cut(s)	364
BssT1I	CCWWGG	1 cut(s)	240
Bst2UI	CCWGG	2 cut(s)	458, 1008
Bst4CI	ACNGT	3 cut(s)	303, 656, 1756
Bst6I	CTCTTC	2 cut(s)	1311, 1893
BstACI	GRCGYC	1 cut(s)	364
BstAUI	TGTACA	1 cut(s)	168
BstDEI	CTNAG	9 cut(s)	347, 354, 435, 543, 908, 926, 1229, 1600, 1909
BstDSI	CCRYGG	1 cut(s)	240
BstFNI	CGCG	1 cut(s)	677
BstHHI	GCGC	1 cut(s)	234
BstKTI	GATC	9 cut(s)	360, 390, 642, 681, 704, 942, 1068, 1565, 1983
BstMAI	GTCTC	2 cut(s)	539, 1895
BstMBI	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
BstMWI	GCNNNNNNNGC	3 cut(s)	842, 857, 1318
BstNI	CCWGG	2 cut(s)	458, 1008
BstNSI	RCATGY	1 cut(s)	2154
BstPAI	GACNNNNGTC	1 cut(s)	1623
BstSCI	CCNGG	5 cut(s)	456, 681, 1006, 1278, 2000
BstSFI	CTRYAG	1 cut(s)	1419
BstUI	CGCG	1 cut(s)	677
BstV1I	GCAGC	4 cut(s)	33, 443, 1177, 2113
BstX2I	RGATCY	1 cut(s)	1562
BstYI	RGATCY	1 cut(s)	1562
BsuI	GTATCC	1 cut(s)	1510
BsuRI	GGCC	7 cut(s)	296, 500, 690, 860, 1093, 1278, 1478
BtgI	CCRYGG	1 cut(s)	240
BtgZI	GCGATG	1 cut(s)	408
BtsIMutI	CAGTG	3 cut(s)	573, 976, 1748
BtuMI	TCGCGA	1 cut(s)	677
CciI	TCATGA	1 cut(s)	933
CfoI	GCGC	1 cut(s)	234
Cfr13I	GGNCC	6 cut(s)	130, 295, 571, 689, 1102, 1300
Csp6I	GTAC	5 cut(s)	169, 472, 2076, 2096, 2133
CviQI	GTAC	5 cut(s)	169, 472, 2076, 2096, 2133
DdeI	CTNAG	9 cut(s)	347, 354, 435, 543, 908, 926, 1229, 1600, 1909
DpnI	GATC	9 cut(s)	359, 389, 641, 680, 703, 941, 1067, 1564, 1982
DpnII	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
EaeI	YGGCCR	2 cut(s)	858, 1276
Eam1104I	CTCTTC	2 cut(s)	1311, 1893
EarI	CTCTTC	2 cut(s)	1311, 1893
EciI	GGCGGA	1 cut(s)	1701
Ecl136II	GAGCTC	3 cut(s)	337, 351, 801
Eco130I	CCWWGG	1 cut(s)	240
Eco24I	GRGCYC	3 cut(s)	339, 353, 803
Eco31I	GGTCTC	1 cut(s)	539
Eco32I	GATATC	2 cut(s)	381, 1029
Eco47I	GGWCC	4 cut(s)	130, 571, 1102, 1300
Eco53kI	GAGCTC	3 cut(s)	337, 351, 801
Eco57I	CTGAAG	2 cut(s)	21, 1803
EcoICRI	GAGCTC	3 cut(s)	337, 351, 801
EcoRII	CCWGG	2 cut(s)	456, 1006
EcoRV	GATATC	2 cut(s)	381, 1029
EcoT14I	CCWWGG	1 cut(s)	240
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	339, 353, 803
ErhI	CCWWGG	1 cut(s)	240
FalI	AAGNNNNNCTT	2 cut(s)	1134, 1166
FaqI	GGGAC	2 cut(s)	810, 2060
FauNDI	CATATG	1 cut(s)	580
FbaI	TGATCA	2 cut(s)	387, 1065
FblI	GTMKAC	1 cut(s)	1266
Fnu4HI	GCNGC	5 cut(s)	19, 22, 432, 1191, 2102
FriOI	GRGCYC	3 cut(s)	339, 353, 803
Fsp4HI	GCNGC	5 cut(s)	19, 22, 432, 1191, 2102
FspBI	CTAG	6 cut(s)	140, 254, 258, 1460, 1698, 2160
FspI	TGCGCA	1 cut(s)	233
GlaI	GCGC	1 cut(s)	233
GluI	GCNGC	5 cut(s)	19, 22, 432, 1191, 2102
GsuI	CTGGAG	2 cut(s)	204, 1157
HaeIII	GGCC	7 cut(s)	296, 500, 690, 860, 1093, 1278, 1478
HapII	CCGG	5 cut(s)	117, 288, 683, 1279, 2001
HhaI	GCGC	1 cut(s)	234
Hin1I	GRCGYC	1 cut(s)	364
Hin6I	GCGC	1 cut(s)	232
HinP1I	GCGC	1 cut(s)	232
HincII	GTYRAC	3 cut(s)	1267, 1618, 1633
HindII	GTYRAC	3 cut(s)	1267, 1618, 1633
HindIII	AAGCTT	1 cut(s)	817
HinfI	GANTC	7 cut(s)	93, 276, 823, 1003, 1325, 1694, 1759
HpaII	CCGG	5 cut(s)	117, 288, 683, 1279, 2001
Hpy166II	GTNNAC	6 cut(s)	571, 652, 1014, 1267, 1618, 1633
Hpy188I	TCNGA	6 cut(s)	348, 355, 362, 911, 1783, 2128
Hpy188III	TCNNGA	8 cut(s)	117, 643, 676, 934, 1136, 1208, 1445, 2063
Hpy8I	GTNNAC	6 cut(s)	571, 652, 1014, 1267, 1618, 1633
Hpy99I	CGWCG	1 cut(s)	1268
HpyCH4III	ACNGT	3 cut(s)	303, 656, 1756
HpyCH4IV	ACGT	1 cut(s)	364
HpyCH4V	TGCA	8 cut(s)	4, 221, 764, 1049, 1337, 1592, 1718, 2150
HpyF10VI	GCNNNNNNNGC	3 cut(s)	842, 857, 1318
HpyF3I	CTNAG	9 cut(s)	347, 354, 435, 543, 908, 926, 1229, 1600, 1909
HpySE526I	ACGT	1 cut(s)	364
Hsp92I	GRCGYC	1 cut(s)	364
HspAI	GCGC	1 cut(s)	232
Kpn2I	TCCGGA	1 cut(s)	116
Ksp22I	TGATCA	2 cut(s)	387, 1065
Kzo9I	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
LguI	GCTCTTC	1 cut(s)	1311
LmnI	GCTCC	3 cut(s)	195, 1407, 1688
Lsp1109I	GCAGC	4 cut(s)	33, 443, 1177, 2113
LweI	GCATC	3 cut(s)	385, 738, 1080
MaeI	CTAG	6 cut(s)	140, 254, 258, 1460, 1698, 2160
MaeII	ACGT	1 cut(s)	364
MaeIII	GTNAC	7 cut(s)	626, 919, 1343, 1454, 1746, 1825, 2153
MalI	GATC	9 cut(s)	359, 389, 641, 680, 703, 941, 1067, 1564, 1982
MboI	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
MboII	GAAGA	6 cut(s)	258, 1190, 1328, 1816, 1855, 1910
MfeI	CAATTG	3 cut(s)	164, 213, 708
MflI	RGATCY	1 cut(s)	1562
MhlI	GDGCHC	4 cut(s)	192, 339, 353, 803
MlsI	TGGCCA	1 cut(s)	860
MluNI	TGGCCA	1 cut(s)	860
MlyI	GAGTC	1 cut(s)	832
MmeI	TCCRAC	4 cut(s)	1247, 1585, 1791, 1994
Mox20I	TGGCCA	1 cut(s)	860
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	116
MroXI	GAANNNNTTC	1 cut(s)	265
MscI	TGGCCA	1 cut(s)	860
MseI	TTAA	5 cut(s)	86, 1364, 1535, 1646, 2189
MslI	CAYNNNNRTG	1 cut(s)	1040
Msp20I	TGGCCA	1 cut(s)	860
MspI	CCGG	5 cut(s)	117, 288, 683, 1279, 2001
MspR9I	CCNGG	5 cut(s)	458, 683, 1008, 1280, 2002
MunI	CAATTG	3 cut(s)	164, 213, 708
Mva1269I	GAATGC	2 cut(s)	221, 796
MvaI	CCWGG	2 cut(s)	458, 1008
MvnI	CGCG	1 cut(s)	677
MwoI	GCNNNNNNNGC	3 cut(s)	842, 857, 1318
NciI	CCSGG	3 cut(s)	683, 1280, 2002
NcoI	CCATGG	1 cut(s)	240
NdeI	CATATG	1 cut(s)	580
NdeII	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
NlaIV	GGNNCC	1 cut(s)	1403
NmuCI	GTSAC	5 cut(s)	626, 1343, 1454, 1746, 1825
NruI	TCGCGA	1 cut(s)	677
NsbI	TGCGCA	1 cut(s)	233
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	2154
PagI	TCATGA	1 cut(s)	933
PciSI	GCTCTTC	1 cut(s)	1311
PctI	GAATGC	2 cut(s)	221, 796
PdmI	GAANNNNTTC	1 cut(s)	265
PfeI	GAWTC	6 cut(s)	93, 276, 1003, 1325, 1694, 1759
PflMI	CCANNNNNTGG	1 cut(s)	982
PfoI	TCCNGGA	1 cut(s)	681
PkrI	GCNGC	5 cut(s)	20, 23, 433, 1192, 2103
PleI	GAGTC	1 cut(s)	831
PpsI	GAGTC	1 cut(s)	831
PshAI	GACNNNNGTC	1 cut(s)	1623
PshBI	ATTAAT	1 cut(s)	86
PsiI	TTATAA	2 cut(s)	1487, 1872
Psp124BI	GAGCTC	3 cut(s)	339, 353, 803
Psp6I	CCWGG	2 cut(s)	456, 1006
PspGI	CCWGG	2 cut(s)	456, 1006
PspN4I	GGNNCC	1 cut(s)	1403
PspPI	GGNCC	6 cut(s)	130, 295, 571, 689, 1102, 1300
PsuI	RGATCY	1 cut(s)	1562
RruI	TCGCGA	1 cut(s)	677
RsaI	GTAC	5 cut(s)	170, 473, 2077, 2097, 2134
RsaNI	GTAC	5 cut(s)	169, 472, 2076, 2096, 2133
RseI	CAYNNNNRTG	1 cut(s)	1040
SacI	GAGCTC	3 cut(s)	339, 353, 803
SalI	GTCGAC	1 cut(s)	1265
SapI	GCTCTTC	1 cut(s)	1311
SaqAI	TTAA	5 cut(s)	86, 1364, 1535, 1646, 2189
SatI	GCNGC	5 cut(s)	19, 22, 432, 1191, 2102
Sau3AI	GATC	9 cut(s)	357, 387, 639, 678, 701, 939, 1065, 1562, 1980
Sau96I	GGNCC	6 cut(s)	130, 295, 571, 689, 1102, 1300
SchI	GAGTC	1 cut(s)	832
ScrFI	CCNGG	5 cut(s)	458, 683, 1008, 1280, 2002
SduI	GDGCHC	4 cut(s)	192, 339, 353, 803
SfaNI	GCATC	3 cut(s)	385, 738, 1080
SfcI	CTRYAG	1 cut(s)	1419
SinI	GGWCC	4 cut(s)	130, 571, 1102, 1300
SmiMI	CAYNNNNRTG	1 cut(s)	1040
SmlI	CTYRAG	1 cut(s)	820
SmoI	CTYRAG	1 cut(s)	820
SpeI	ACTAGT	1 cut(s)	139
SsiI	CCGC	3 cut(s)	19, 695, 1686
SspI	AATATT	1 cut(s)	79
SspMI	CTAG	6 cut(s)	140, 254, 258, 1460, 1698, 2160
SstI	GAGCTC	3 cut(s)	339, 353, 803
StyD4I	CCNGG	5 cut(s)	456, 681, 1006, 1278, 2000
StyI	CCWWGG	1 cut(s)	240
TaaI	ACNGT	3 cut(s)	303, 656, 1756
TaiI	ACGT	1 cut(s)	367
TaqI	TCGA	3 cut(s)	377, 590, 1266
TatI	WGTACW	3 cut(s)	168, 2075, 2132
TauI	GCSGC	1 cut(s)	21
TfiI	GAWTC	6 cut(s)	93, 276, 1003, 1325, 1694, 1759
Tru1I	TTAA	5 cut(s)	86, 1364, 1535, 1646, 2189
Tru9I	TTAA	5 cut(s)	86, 1364, 1535, 1646, 2189
TscAI	CASTG	3 cut(s)	573, 983, 1755
TseFI	GTSAC	5 cut(s)	626, 1343, 1454, 1746, 1825
TseI	GCWGC	4 cut(s)	21, 431, 1190, 2101
Tsp45I	GTSAC	5 cut(s)	626, 1343, 1454, 1746, 1825
TspGWI	ACGGA	1 cut(s)	1555
TspRI	CASTG	3 cut(s)	573, 983, 1755
Van91I	CCANNNNNTGG	1 cut(s)	982
VpaK11BI	GGWCC	4 cut(s)	130, 571, 1102, 1300
VspI	ATTAAT	1 cut(s)	86
XapI	RAATTY	5 cut(s)	29, 55, 62, 261, 1736
XceI	RCATGY	1 cut(s)	2154
XmiI	GTMKAC	1 cut(s)	1266
XmnI	GAANNNNTTC	1 cut(s)	265
XspI	CTAG	6 cut(s)	140, 254, 258, 1460, 1698, 2160
ZraI	GACGTC	1 cut(s)	365
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.