Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0012193

Physical Location & Seq

Genomic Coordinates Reverse (-)

8325111 .. 8328883

Gene Structure 3773 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3672 bp

ATGGACCAGGAGACCTTTATGATTACCTTGAAAGAGCTTTTTACGGGTTGCAACTTTCATTTTGGGAGCCCTGTTAAGCAGTTGTTCGATATGTTGAAGGGAGGTTTGTGTGAACCAAGAGTTGCTCTTTACCGGGAGGGTTTGGATTTCTTTCAGAAGCGGCAGCACTACAATCTTTTGAGGAAGCATCAGAACAGTATGGTTAGTAATCTCTGTCAAATAAGAAATGCTTGGCTTAATTGCAAGGGATATAGTATTGAGGAGAGGCTCCGGGTGCTGAATATTATGAGAATCCAAAAGAGTTTGATGGGTGAGAAGATAGAGGATATGGAGGCTGACTCATCAGAAAGAGAGTCGGGTGAAGGTTTACGGAGCAACAAAATCAAGGACAGGAAAACTGCACAGAAAATGGCTCGTTATTCTGTATATGGGGTGGATACAAGTGTGGAACTTGCATCAAAAGGGCGGTCGTCAGCTATGGAATTGGCAAAATATGGGAAGCAGAATCCGAAAGGTATACTGAAGTTGGCTGGGTCCAAGACTCCTTCAGCAAAAGAGCTAGCAAACCATTCAGGACCATACAGTTCAGCCGTAGCTCTTCCTCGGCAGCATAAAGCAGTAGGGGATGATGCTGGGGCAGCACTCAGAATAAGGGATCAATTTATAAGTGGTGATGATGTTGAAGACGCAACATATGGATTTGACATTCAGCGAGATAGAAATGTGTCTCGTGGTAGCAGTATGGATAGGTCCGGTGTTTTCAAAGTGGGAAAGAATCATGACCTTTCAAGAGGTGATGAATTAAACACTGACAGTTTGATGCGTCTGCCTCTCTCCTCAAAGGCTGACGTTTATGCCTATGGTAGGAACCGCAGTGCAAACCTTTTGTCAGAGGCAAATGTTTTAACAGAAAAGCCTCCTAACTTGAGAGCTCCCTATGAATTTGGTAAAAAGGCCAAGTATCCAGAAAATATTCATCAATTCACAGTTGGGGATCAGATGAAGTCCTTGAAAGCCAGATTTCCACAGCCTCCGCTCAGAGGAGATCGAGCTGACTTATCAGAACGTGCAGAACCATTCTGGCATAAAAGGACTGAAGGGGATACTTTTTCTATGGATTCTCCCTTAAGATCGGATGATTGGAATGCTAGGAGCAAGAAATGGAAGTTAGGGAGGGAGTCTCCTGATCTTAATCACAAATCATATAGAGCTTCCCCACCACAGATGAATGCTAGGTTTATATCTTCTGAATTTAGAGCAAAACCATTGCAAGAGAAGATGAGAGACAAGAGAATGCAAAATGGAGTATCAGAAATTGCAGCATTGAAAGGTAATAGAATGTTTGTAAAAAATGAAGATACAGAATCAGACTCATCGGAGCAATTTGACGACGATGAGGATAGCAACCCTTTGTTGAGGAGGAAGCTGGCTTATCCCAGTGGTGCTATGGAAACTTCTCCATCTTCTTTGTTGAATCCCACTCTAGAAGCAAAAAGGGCCAAATATGCGAGGAAAGAGCTGAAGGAGAGTTTCCAGGCTCTTGATGGGATCAATTACTCCAGTAAGATGGGTGGTTTTGCTGAACATGGACATATGCGTAATCGAGAGAACTATTCTTCCAAAGCAAAACAAAAGGGTAAGATGCGAGACAATAGTCCCTTACATAACTCTTCGACTAGAGCTTTCGAAGAGCGTTATATCCCGGGCTTGAGTAAATTTAATGATGAAGGTGATGATTATGATGAACAGAAACAAATCTACAAATTGGGCAAGAATGCCCAATTTCAAGGGGAAGCTGGTGAAAGTTTGCACACACCCTCATGGAAGGTCTACACTGGAAGGCAGAAAAGAGAAGTTGGCCATGATCATTCTGTGCCAGAGTCTCGCTATTTTGTTGACGAGGAGGATGATTCGCTTGGAATGCGGTTCCTAGGGAATGGTGGTGGACGGGGTAATATCAGGAAGAAAGATCAGAACATTGAAGAATATGTGAGTGATCGCCATGAAAGAATTGAGGTCCCATTATTGGGGTGCAACATGATGGCAAAGAAGCGGCAAGGGAAGGAGCATGTGTCCGATACTGGTAGAGGAGATGAAGATGGCGACCTCCAGTCTAACCATAAACAGCTCATTGTTGATTCCAGTTCCTTGAAAAAAAAGGCAAAGAGGAAGCTAGAGAATGAGACTGTTAGTTCAGATGTAGAAATTTCTGAGCAACCAATTACAGAAATGGGAGCAACAGATATGGAGCCGGAAACCAGGCCCCAGAAAAAGCCATTTACTCCAATTACACCTACAGTTCATACTGGTTTCTCATTCTCGATTATACATCTTCTTTCAGCTGTTCGCTTGGCAATGATCACTCCAGTCCCAGAAGGTACTGTTGGGGAATCTGCGGATGAGCCAAACAAAACTCACGAGGGTGCTGTCAATGGGGTTCTTTCTTGTGAAAGGGCAGATGTCAGTAACTCAGAGCTTGCTGGAGAAATGAATATGCCTTCTCTAACGGTTCAGGACATTGTGAACCGTGTTAGCTTGAATCCAGGAGATCCTTGTATTCTTGAGACACAAGAGCCACTTCAGGATCTTGTGAGAGGAGTTCTAAGGATCTTTTCATCAAAAACAGCACCTTTAGGAGCAAAGGGTTGGAAGACACTGGTTGCCTTTGAAAAAGCTACAAAAAGCTGGTCGTGGACTGGTCCAATTTCTCAGAGTTCATCAGATCACGACGCCAACGAGGAGGTGATATTTCCTGAAGCATGGGGTCTTCCGCACAAAATGCTTGTCAAGCTGGTGGATTCGTTTGCAAATTGGCTCAAATGTGGGCAAGATACCATTCAACAAATTGGAATTCTTCCGGCACCGCCCTTGGAGTTGATGCAGCTCAACCTGGATGAGAAAGAAAGGTTCAGGGATTTAAGAGCTCAAAAGAGTCTTAACACCATTAGCCCAAGTTCCGAAGTAGTGAGGGCTTATTTCCGTAAGGAGGAGGTTCTCAGCCCGAGATCGAACTTTATGTTGAAACGTGATCGACCACCGCATGTTACAATTCTTTGTCTTGTGAGAGATGCAGCTGCAAGGTTGCCTGGAAGTATTGGCACCAGAGCAGATGTTTGCACTTTGATAAGAGATTCTCAATACATTGTTGAAGATGTTTCTGATGCACAAGTTAATCAAGTTGTTAGTGGAGCCTTGGATCGGTTGCATTATGAGCGTGATCCATGTGTGCAATTTGATGGGGAAAGGAAATTATGGGTCTATTTACATAGAGAAAGAGAAGAAGAAGATTTTGAGGATGATGGTACTTCATCTACAAAGAAATGGAAGAGGCAGAAAAAGGATGCTGGCGATCTACCTGACCAAGGAGCAGTGACTGTAGCTTATCATGGGACTGAGGAACAAACTGGGTATGAGATGTGCTCCGATCTCAATGTTGAGCCATCATGTTTGGATGATATGCAACAAGATGTGGAGGATAATACTGATACCAATAACGGGTCTGAACAAGATGAAATGCGCCAAGGCAATCCAATGCTTTGGGAGGGTCATGGCTTGAATCCAATGTGTGAAAACAAATTGCTGTGTCAGGAAAATTCCACAAATGAAGATTTTGATGATGAAACGTTTGGGAGAGAAAGGACAGTTGGGCTCTTGAGTGCAAGCTTATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0002020 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0019899 GO:0031011 GO:0031974 GO:0031981 GO:0032991 GO:0033202 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0070603 GO:0097346 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1224

Amino Acids

137.9

Weight (kDa)

6.01

Isoelectric Point (pI)

45.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_2nd_NFRKB	PF25793	967 - 1095	1.2e-47	NFRKB second winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45830
fragaria_vesca	FvH4_3g34430 FvH4_3g34430
malus_domestica	MD03G1106200.v1.1 MD11G1118300.v1.1
prunus_persica	Prupe.6G088700_v2.0.a1
pyrus_communis	pycom03g08520 pycom11g09930
rosa_chinensis	RchiOBHm_Chr5g0062031
rosa_laevigata	RLG00000035527
rosa_multiflora	Rmu_sc0002296.1_g000008 Rmu_sc0017669.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018660
rosa_rugosa	Rorug05G0345700
rosa_samantha	Rh5AG407000 Rh5BG420300 Rh5CG444400 Rh5DG435700
rosa_wichuraiana	Rw5G038350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	665
AccB1I	GGYRCC	2 cut(s)	2860, 3098
AccBSI	CCGCTC	1 cut(s)	1036
AccI	GTMKAC	2 cut(s)	517, 1830
AclI	AACGTT	1 cut(s)	3623
AclWI	GGATC	8 cut(s)	663, 1002, 1556, 2543, 2592, 2615, 3204, 3212
AcoI	YGGCCR	1 cut(s)	1858
AcsI	RAATTY	6 cut(s)	941, 1250, 1715, 2205, 2850, 3592
AcuI	CTGAAG	6 cut(s)	531, 542, 1116, 1541, 2564, 2775
AcyI	GRCGYC	1 cut(s)	2730
AfaI	GTAC	2 cut(s)	2380, 3304
AfiI	CCNNNNNNNGG	8 cut(s)	864, 1040, 2026, 2027, 2986, 3198, 3362, 3495
AflII	CTTAAG	1 cut(s)	1126
AhdI	GACNNNNNGTC	1 cut(s)	2110
AjnI	CCWGG	6 cut(s)	6, 1533, 2258, 2542, 2889, 3085
AjuI	GAANNNNNNNTTGG	4 cut(s)	2367, 2399, 3627, 3659
AleI	CACNNNNGTG	1 cut(s)	2421
AloI	GAACNNNNNNTCC	2 cut(s)	1601, 1633
Alw21I	GWGCWC	3 cut(s)	934, 2926, 3422
Alw26I	GTCTC	8 cut(s)	5, 732, 1185, 1278, 1641, 1887, 2177, 2558
AlwI	GGATC	8 cut(s)	663, 1002, 1556, 2543, 2592, 2615, 3204, 3212
AlwNI	CAGNNNCTG	1 cut(s)	3374
Ama87I	CYCGRG	2 cut(s)	1702, 3001
AoxI	GGCC	4 cut(s)	954, 1497, 1858, 2261
ApeKI	GCWGC	7 cut(s)	163, 607, 638, 1319, 2881, 3071, 3074
ApoI	RAATTY	6 cut(s)	941, 1250, 1715, 2205, 2850, 3592
ArsI	GACNNNNNNTTYG	8 cut(s)	452, 484, 872, 904, 2672, 2704, 2769, 2801
Asp700I	GAANNNNTTC	1 cut(s)	972
AspA2I	CCTAGG	1 cut(s)	1930
AspLEI	GCGC	1 cut(s)	3519
AspS9I	GGNCC	8 cut(s)	4, 534, 575, 750, 1497, 2017, 2262, 2699
AsuC2I	CCSGG	4 cut(s)	134, 272, 1703, 1704
AsuHPI	GGTGA	7 cut(s)	323, 371, 683, 806, 1742, 1811, 2755
AsuII	TTCGAA	1 cut(s)	1686
AsuNHI	GCTAGC	1 cut(s)	559
AvaI	CYCGRG	2 cut(s)	1702, 3001
AvaII	GGWCC	6 cut(s)	4, 534, 575, 750, 2017, 2699
AvrII	CCTAGG	1 cut(s)	1930
BaeI	ACNNNNGTAYC	2 cut(s)	429, 462
BalI	TGGCCA	1 cut(s)	1860
BanI	GGYRCC	2 cut(s)	2860, 3098
BanII	GRGCYC	4 cut(s)	71, 934, 2926, 3651
BauI	CACGAG	2 cut(s)	729, 2417
BbsI	GAAGAC	3 cut(s)	690, 2657, 2759
Bbv12I	GWGCWC	3 cut(s)	934, 2926, 3422
BbvI	GCAGC	7 cut(s)	175, 619, 650, 1331, 2893, 3061, 3083
BccI	CCATC	9 cut(s)	301, 1468, 1538, 1561, 2035, 2093, 3230, 3293, 3448
BceAI	ACGGC	1 cut(s)	575
BciT130I	CCWGG	6 cut(s)	8, 1535, 2260, 2544, 2891, 3087
BciVI	GTATCC	3 cut(s)	430, 972, 1096
BclI	TGATCA	2 cut(s)	1864, 2358
BcnI	CCSGG	4 cut(s)	134, 272, 1703, 1704
BcoDI	GTCTC	8 cut(s)	5, 732, 1185, 1278, 1641, 1887, 2177, 2558
BfaI	CTAG	7 cut(s)	560, 1149, 1233, 1484, 1677, 1931, 2174
BfmI	CTRYAG	2 cut(s)	2295, 3375
BfrI	CTTAAG	1 cut(s)	1126
BfuI	GTATCC	3 cut(s)	430, 972, 1096
BisI	GCNGC	9 cut(s)	161, 164, 608, 639, 1320, 2054, 2882, 3072, 3075
BlnI	CCTAGG	1 cut(s)	1930
BlsI	GCNGC	9 cut(s)	162, 165, 609, 640, 1321, 2055, 2883, 3073, 3076
Bme18I	GGWCC	6 cut(s)	4, 534, 575, 750, 2017, 2699
BmeRI	GACNNNNNGTC	1 cut(s)	2110
BmeT110I	CYCGRG	2 cut(s)	1702, 3001
BmgT120I	GGNCC	8 cut(s)	4, 534, 575, 750, 1497, 2017, 2262, 2699
BmrI	ACTGGG	2 cut(s)	1431, 3414
BmsI	GCATC	9 cut(s)	196, 464, 619, 810, 1632, 2868, 3058, 3151, 3331
BmtI	GCTAGC	1 cut(s)	563
BmuI	ACTGGG	2 cut(s)	1431, 3414
BoxI	GACNNNNGTC	1 cut(s)	1653
BpiI	GAAGAC	3 cut(s)	690, 2657, 2759
BplI	GAGNNNNNCTC	6 cut(s)	323, 355, 1165, 1197, 3404, 3436
BpmI	CTGGAG	4 cut(s)	1543, 2093, 2349, 2502
Bpu14I	TTCGAA	1 cut(s)	1686
BpuEI	CTTGAG	3 cut(s)	946, 1729, 2582
BpuMI	CCSGG	4 cut(s)	134, 272, 1703, 1704
BsaBI	GATNNNNATC	1 cut(s)	1191
BsaHI	GRCGYC	1 cut(s)	2730
BsaI	GGTCTC	1 cut(s)	5
BsaJI	CCNNGG	7 cut(s)	602, 1702, 1930, 2868, 3192, 3361, 3520
BsaWI	WCCGGW	1 cut(s)	752
BsaXI	ACNNNNNCTCC	2 cut(s)	2057, 2087
Bsc4I	CCNNNNNNNGG	8 cut(s)	864, 1040, 2026, 2027, 2986, 3198, 3362, 3495
Bse3DI	GCAATG	2 cut(s)	1265, 2361
Bse8I	GATNNNNATC	1 cut(s)	1191
BseBI	CCWGG	6 cut(s)	8, 1535, 2260, 2544, 2891, 3087
BseDI	CCNNGG	7 cut(s)	602, 1702, 1930, 2868, 3192, 3361, 3520
BseGI	GGATG	8 cut(s)	631, 1141, 1912, 2404, 2899, 3301, 3346, 3457
BseJI	GATNNNNATC	1 cut(s)	1191
BseLI	CCNNNNNNNGG	8 cut(s)	864, 1040, 2026, 2027, 2986, 3198, 3362, 3495
BseMI	GCAATG	2 cut(s)	1265, 2361
BseMII	CTCAG	7 cut(s)	658, 1051, 2202, 2484, 2723, 3010, 3384
BseRI	GAGGAG	9 cut(s)	275, 826, 1056, 1432, 1916, 2103, 2610, 2753, 3002
BseXI	GCAGC	7 cut(s)	175, 619, 650, 1331, 2893, 3061, 3083
BseYI	CCCAGC	2 cut(s)	530, 632
BsgI	GTGCAG	2 cut(s)	384, 1089
Bsh1285I	CGRYCG	1 cut(s)	470
BshFI	GGCC	4 cut(s)	956, 1499, 1860, 2263
BshNI	GGYRCC	2 cut(s)	2860, 3098
BsiEI	CGRYCG	1 cut(s)	470
BsiHKAI	GWGCWC	3 cut(s)	934, 2926, 3422
BsiHKCI	CYCGRG	2 cut(s)	1702, 3001
BsiSI	CCGG	6 cut(s)	133, 271, 753, 1703, 2252, 2858
BslFI	GGGAC	4 cut(s)	1641, 2003, 2354, 3403
BslI	CCNNNNNNNGG	8 cut(s)	864, 1040, 2026, 2027, 2986, 3198, 3362, 3495
BsmAI	GTCTC	8 cut(s)	5, 732, 1185, 1278, 1641, 1887, 2177, 2558
BsmFI	GGGAC	4 cut(s)	1641, 2003, 2354, 3403
BsmI	GAATGC	5 cut(s)	1150, 1234, 1299, 1780, 1926
BsnI	GGCC	4 cut(s)	956, 1499, 1860, 2263
Bso31I	GGTCTC	1 cut(s)	5
BsoBI	CYCGRG	2 cut(s)	1702, 3001
Bsp119I	TTCGAA	1 cut(s)	1686
Bsp1286I	GDGCHC	5 cut(s)	71, 934, 2926, 3422, 3651
BspANI	GGCC	4 cut(s)	956, 1499, 1860, 2263
BspCNI	CTCAG	7 cut(s)	657, 1050, 2203, 2483, 2722, 3009, 3385
BspHI	TCATGA	1 cut(s)	778
BspOI	GCTAGC	1 cut(s)	563
BspPI	GGATC	8 cut(s)	663, 1002, 1556, 2543, 2592, 2615, 3204, 3212
BspQI	GCTCTTC	2 cut(s)	603, 1683
BspT104I	TTCGAA	1 cut(s)	1686
BspT107I	GGYRCC	2 cut(s)	2860, 3098
BspTI	CTTAAG	1 cut(s)	1126
BspTNI	GGTCTC	1 cut(s)	5
BsrBI	CCGCTC	1 cut(s)	1036
BsrDI	GCAATG	2 cut(s)	1265, 2361
BssECI	CCNNGG	7 cut(s)	602, 1702, 1930, 2868, 3192, 3361, 3520
BssNAI	GTATAC	1 cut(s)	518
BssNI	GRCGYC	1 cut(s)	2730
BssSI	CACGAG	2 cut(s)	729, 2417
BssT1I	CCWWGG	5 cut(s)	1930, 2868, 3192, 3361, 3520
Bst1107I	GTATAC	1 cut(s)	518
Bst2BI	CACGAG	2 cut(s)	729, 2417
Bst2UI	CCWGG	6 cut(s)	8, 1535, 2260, 2544, 2891, 3087
Bst6I	CTCTTC	4 cut(s)	603, 1675, 1683, 3320
BstACI	GRCGYC	1 cut(s)	2730
BstAFI	CTTAAG	1 cut(s)	1126
BstAPI	GCANNNNNTGC	1 cut(s)	2779
BstBI	TTCGAA	1 cut(s)	1686
BstC8I	GCNNGC	5 cut(s)	561, 1428, 2478, 3346, 3661
BstDEI	CTNAG	8 cut(s)	644, 1037, 2211, 2470, 2603, 2709, 2996, 3393
BstENI	CCTNNNNNAGG	2 cut(s)	862, 3360
BstF5I	GGATG	8 cut(s)	631, 1141, 1912, 2404, 2899, 3301, 3346, 3457
BstHHI	GCGC	1 cut(s)	3519
BstMAI	GTCTC	8 cut(s)	5, 732, 1185, 1278, 1641, 1887, 2177, 2558
BstMCI	CGRYCG	1 cut(s)	470
BstMWI	GCNNNNNNNGC	8 cut(s)	274, 638, 1496, 1505, 1921, 2779, 2788, 3211
BstNI	CCWGG	6 cut(s)	8, 1535, 2260, 2544, 2891, 3087
BstNSI	RCATGY	2 cut(s)	2072, 3044
BstPAI	GACNNNNGTC	1 cut(s)	1653
BstSFI	CTRYAG	2 cut(s)	2295, 3375
BstV1I	GCAGC	7 cut(s)	175, 619, 650, 1331, 2893, 3061, 3083
BstV2I	GAAGAC	3 cut(s)	690, 2657, 2759
BstX2I	RGATCY	3 cut(s)	2548, 2584, 2607
BstXI	CCANNNNNNTGG	2 cut(s)	1567, 3537
BstYI	RGATCY	3 cut(s)	2548, 2584, 2607
BstZ17I	GTATAC	1 cut(s)	518
BsuI	GTATCC	3 cut(s)	430, 972, 1096
BsuRI	GGCC	4 cut(s)	956, 1499, 1860, 2263
BtsCI	GGATG	8 cut(s)	631, 1141, 1912, 2404, 2899, 3301, 3346, 3457
BtsI	GCAGTG	2 cut(s)	880, 3375
BtsIMutI	CAGTG	6 cut(s)	807, 880, 1444, 1833, 2654, 3375
Cac8I	GCNNGC	5 cut(s)	561, 1428, 2478, 3346, 3661
CaiI	CAGNNNCTG	1 cut(s)	3374
CciI	TCATGA	1 cut(s)	778
CfoI	GCGC	1 cut(s)	3519
Cfr13I	GGNCC	8 cut(s)	4, 534, 575, 750, 1497, 2017, 2262, 2699
Cfr9I	CCCGGG	1 cut(s)	1702
CseI	GACGC	3 cut(s)	695, 812, 2738
Csp6I	GTAC	2 cut(s)	2379, 3303
CviQI	GTAC	2 cut(s)	2379, 3303
DdeI	CTNAG	8 cut(s)	644, 1037, 2211, 2470, 2603, 2709, 2996, 3393
DriI	GACNNNNNGTC	1 cut(s)	2110
EaeI	YGGCCR	1 cut(s)	1858
Eam1104I	CTCTTC	4 cut(s)	603, 1675, 1683, 3320
Eam1105I	GACNNNNNGTC	1 cut(s)	2110
EarI	CTCTTC	4 cut(s)	603, 1675, 1683, 3320
Ecl136II	GAGCTC	2 cut(s)	932, 2924
Eco130I	CCWWGG	5 cut(s)	1930, 2868, 3192, 3361, 3520
Eco24I	GRGCYC	4 cut(s)	71, 934, 2926, 3651
Eco31I	GGTCTC	1 cut(s)	5
Eco47I	GGWCC	6 cut(s)	4, 534, 575, 750, 2017, 2699
Eco53kI	GAGCTC	2 cut(s)	932, 2924
Eco57I	CTGAAG	6 cut(s)	531, 542, 1116, 1541, 2564, 2775
Eco88I	CYCGRG	2 cut(s)	1702, 3001
EcoICRI	GAGCTC	2 cut(s)	932, 2924
EcoNI	CCTNNNNNAGG	2 cut(s)	862, 3360
EcoO109I	RGGNCCY	2 cut(s)	2017, 2262
EcoRI	GAATTC	1 cut(s)	2850
EcoRII	CCWGG	6 cut(s)	6, 1533, 2258, 2542, 2889, 3085
EcoT14I	CCWWGG	5 cut(s)	1930, 2868, 3192, 3361, 3520
EcoT38I	GRGCYC	4 cut(s)	71, 934, 2926, 3651
ErhI	CCWWGG	5 cut(s)	1930, 2868, 3192, 3361, 3520
FalI	AAGNNNNNCTT	4 cut(s)	214, 246, 2562, 2594
FaqI	GGGAC	4 cut(s)	1641, 2003, 2354, 3403
FauNDI	CATATG	2 cut(s)	694, 1593
FbaI	TGATCA	2 cut(s)	1864, 2358
FblI	GTMKAC	2 cut(s)	517, 1830
Fnu4HI	GCNGC	9 cut(s)	161, 164, 608, 639, 1320, 2054, 2882, 3072, 3075
FokI	GGATG	8 cut(s)	638, 1148, 1919, 2411, 2906, 3308, 3353, 3464
FriOI	GRGCYC	4 cut(s)	71, 934, 2926, 3651
Fsp4HI	GCNGC	9 cut(s)	161, 164, 608, 639, 1320, 2054, 2882, 3072, 3075
FspBI	CTAG	7 cut(s)	560, 1149, 1233, 1484, 1677, 1931, 2174
GlaI	GCGC	1 cut(s)	3518
GluI	GCNGC	9 cut(s)	161, 164, 608, 639, 1320, 2054, 2882, 3072, 3075
GsaI	CCCAGC	2 cut(s)	534, 636
GsuI	CTGGAG	4 cut(s)	1543, 2093, 2349, 2502
HaeIII	GGCC	4 cut(s)	956, 1499, 1860, 2263
HapII	CCGG	6 cut(s)	133, 271, 753, 1703, 2252, 2858
HgaI	GACGC	3 cut(s)	695, 812, 2738
HhaI	GCGC	1 cut(s)	3519
Hin1I	GRCGYC	1 cut(s)	2730
Hin6I	GCGC	1 cut(s)	3517
HinP1I	GCGC	1 cut(s)	3517
HincII	GTYRAC	1 cut(s)	1897
HindII	GTYRAC	1 cut(s)	1897
HindIII	AAGCTT	1 cut(s)	3661
HpaII	CCGG	6 cut(s)	133, 271, 753, 1703, 2252, 2858
HphI	GGTGA	7 cut(s)	323, 371, 683, 806, 1742, 1811, 2755
Hpy166II	GTNNAC	8 cut(s)	113, 368, 518, 1831, 1897, 1946, 2524, 2694
Hpy8I	GTNNAC	8 cut(s)	113, 368, 518, 1831, 1897, 1946, 2524, 2694
Hpy99I	CGWCG	2 cut(s)	1394, 2732
HpyCH4IV	ACGT	4 cut(s)	849, 1066, 3025, 3623
HpyF10VI	GCNNNNNNNGC	8 cut(s)	274, 638, 1496, 1505, 1921, 2779, 2788, 3211
HpyF3I	CTNAG	8 cut(s)	644, 1037, 2211, 2470, 2603, 2709, 2996, 3393
HpySE526I	ACGT	4 cut(s)	849, 1066, 3025, 3623
Hsp92I	GRCGYC	1 cut(s)	2730
HspAI	GCGC	1 cut(s)	3517
Ksp22I	TGATCA	2 cut(s)	1864, 2358
LguI	GCTCTTC	2 cut(s)	603, 1683
Lsp1109I	GCAGC	7 cut(s)	175, 619, 650, 1331, 2893, 3061, 3083
LweI	GCATC	9 cut(s)	196, 464, 619, 810, 1632, 2868, 3058, 3151, 3331
MaeI	CTAG	7 cut(s)	560, 1149, 1233, 1484, 1677, 1931, 2174
MaeII	ACGT	4 cut(s)	849, 1066, 3025, 3623
MaeIII	GTNAC	3 cut(s)	2465, 3043, 3370
MbiI	CCGCTC	1 cut(s)	1036
MflI	RGATCY	3 cut(s)	2548, 2584, 2607
MhlI	GDGCHC	5 cut(s)	71, 934, 2926, 3422, 3651
MlsI	TGGCCA	1 cut(s)	1860
MluNI	TGGCCA	1 cut(s)	1860
MlyI	GAGTC	7 cut(s)	332, 362, 535, 1187, 1364, 1889, 2941
MmeI	TCCRAC	1 cut(s)	2627
Mox20I	TGGCCA	1 cut(s)	1860
MroXI	GAANNNNTTC	1 cut(s)	972
MscI	TGGCCA	1 cut(s)	1860
MslI	CAYNNNNRTG	2 cut(s)	1819, 2421
Msp20I	TGGCCA	1 cut(s)	1860
MspA1I	CMGCKG	2 cut(s)	2342, 3074
MspCI	CTTAAG	1 cut(s)	1126
MspI	CCGG	6 cut(s)	133, 271, 753, 1703, 2252, 2858
Mva1269I	GAATGC	5 cut(s)	1150, 1234, 1299, 1780, 1926
MvaI	CCWGG	6 cut(s)	8, 1535, 2260, 2544, 2891, 3087
MwoI	GCNNNNNNNGC	8 cut(s)	274, 638, 1496, 1505, 1921, 2779, 2788, 3211
NciI	CCSGG	4 cut(s)	134, 272, 1703, 1704
NdeI	CATATG	2 cut(s)	694, 1593
NheI	GCTAGC	1 cut(s)	559
NmeAIII	GCCGAG	1 cut(s)	583
NmuCI	GTSAC	1 cut(s)	3370
NspI	RCATGY	2 cut(s)	2072, 3044
NspV	TTCGAA	1 cut(s)	1686
OliI	CACNNNNGTG	1 cut(s)	2421
PagI	TCATGA	1 cut(s)	778
PciSI	GCTCTTC	2 cut(s)	603, 1683
PcsI	WCGNNNNNNNCGW	1 cut(s)	2733
PctI	GAATGC	5 cut(s)	1150, 1234, 1299, 1780, 1926
PdmI	GAANNNNTTC	1 cut(s)	972
PfoI	TCCNGGA	1 cut(s)	2542
PkrI	GCNGC	9 cut(s)	162, 165, 609, 640, 1321, 2055, 2883, 3073, 3076
PleI	GAGTC	7 cut(s)	332, 361, 535, 1186, 1364, 1888, 2940
PpsI	GAGTC	7 cut(s)	332, 361, 535, 1186, 1364, 1888, 2940
PpuMI	RGGWCCY	1 cut(s)	2017
PshAI	GACNNNNGTC	1 cut(s)	1653
PsiI	TTATAA	1 cut(s)	665
Psp124BI	GAGCTC	2 cut(s)	934, 2926
Psp1406I	AACGTT	1 cut(s)	3623
Psp5II	RGGWCCY	1 cut(s)	2017
Psp6I	CCWGG	6 cut(s)	6, 1533, 2258, 2542, 2889, 3085
PspFI	CCCAGC	2 cut(s)	530, 632
PspGI	CCWGG	6 cut(s)	6, 1533, 2258, 2542, 2889, 3085
PspPI	GGNCC	8 cut(s)	4, 534, 575, 750, 1497, 2017, 2262, 2699
PspPPI	RGGWCCY	1 cut(s)	2017
PstNI	CAGNNNCTG	1 cut(s)	3374
PsuI	RGATCY	3 cut(s)	2548, 2584, 2607
PvuII	CAGCTG	2 cut(s)	2342, 3074
RsaI	GTAC	2 cut(s)	2380, 3304
RsaNI	GTAC	2 cut(s)	2379, 3303
RseI	CAYNNNNRTG	2 cut(s)	1819, 2421
SacI	GAGCTC	2 cut(s)	934, 2926
SapI	GCTCTTC	2 cut(s)	603, 1683
SatI	GCNGC	9 cut(s)	161, 164, 608, 639, 1320, 2054, 2882, 3072, 3075
Sau96I	GGNCC	8 cut(s)	4, 534, 575, 750, 1497, 2017, 2262, 2699
SchI	GAGTC	7 cut(s)	332, 362, 535, 1187, 1364, 1889, 2941
SduI	GDGCHC	5 cut(s)	71, 934, 2926, 3422, 3651
SfaNI	GCATC	9 cut(s)	196, 464, 619, 810, 1632, 2868, 3058, 3151, 3331
SfcI	CTRYAG	2 cut(s)	2295, 3375
SfuI	TTCGAA	1 cut(s)	1686
SinI	GGWCC	6 cut(s)	4, 534, 575, 750, 2017, 2699
SmaI	CCCGGG	1 cut(s)	1704
SmiMI	CAYNNNNRTG	2 cut(s)	1819, 2421
SmlI	CTYRAG	5 cut(s)	925, 1126, 1708, 2561, 3652
SmoI	CTYRAG	5 cut(s)	925, 1126, 1708, 2561, 3652
SspI	AATATT	2 cut(s)	283, 973
SspMI	CTAG	7 cut(s)	560, 1149, 1233, 1484, 1677, 1931, 2174
SstI	GAGCTC	2 cut(s)	934, 2926
StyI	CCWWGG	5 cut(s)	1930, 2868, 3192, 3361, 3520
TaiI	ACGT	4 cut(s)	852, 1069, 3028, 3626
TaqI	TCGA	8 cut(s)	87, 1048, 1603, 1673, 1686, 2321, 3008, 3031
TauI	GCSGC	2 cut(s)	163, 2056
TscAI	CASTG	6 cut(s)	814, 880, 1444, 1840, 2661, 3375
TseFI	GTSAC	1 cut(s)	3370
TseI	GCWGC	7 cut(s)	163, 607, 638, 1319, 2881, 3071, 3074
Tsp45I	GTSAC	1 cut(s)	3370
TspGWI	ACGGA	2 cut(s)	385, 2969
TspMI	CCCGGG	1 cut(s)	1702
TspRI	CASTG	6 cut(s)	814, 880, 1444, 1840, 2661, 3375
Vha464I	CTTAAG	1 cut(s)	1126
VpaK11BI	GGWCC	6 cut(s)	4, 534, 575, 750, 2017, 2699
XagI	CCTNNNNNAGG	2 cut(s)	862, 3360
XapI	RAATTY	6 cut(s)	941, 1250, 1715, 2205, 2850, 3592
XbaI	TCTAGA	1 cut(s)	1483
XceI	RCATGY	2 cut(s)	2072, 3044
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1444, 1541
XmaI	CCCGGG	1 cut(s)	1702
XmaJI	CCTAGG	1 cut(s)	1930
XmiI	GTMKAC	2 cut(s)	517, 1830
XmnI	GAANNNNTTC	1 cut(s)	972
XspI	CTAG	7 cut(s)	560, 1149, 1233, 1484, 1677, 1931, 2174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.