pycom11g15620

Serrate RNA effector

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0010205
Physical Location & Seq
Forward (+)
16386667 .. 16393666
7000 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2214 bp
ATGGCCGAGATCATGAACATGCCCGTCGACTCCTTAGACCGTCGTTCTGATCGCAAAGACAAGTCCTCCGAAGATCCCCAATCCCCGCCGCAAGAAGCACCAGCTCCGCCTCCGCCTGCCGCACCCTCGCGAAGGCGCGACAGGGACGAAAGGGACAGAGGCAGAGACGATAGGGACCTCGACCGCCCTCCCAGTCGCCGCCCCGATTACTACGATCGAAATCGCTCCCCTCCGCCTCCTGCTATTCGAGAGAGGGATAGAGATAGAGAGAGGGACTATAAGCGCCGGGGCAGCCTCAGTCCTCCACCCCCTTTTAGGGACCGCAGGCACTCTCCGCCACGGAGGTCTCCTCCACCTCCGTTCAAGCGGTCTAGGAGGGAAGATGGAGGGTATGATGGCAGGAGAGGGAGTCCCAGAGGAGGGTTTGGACCTGGGGATAGGAGGTTGGGATATGATTATCCAGGTGGATACGATCGTGAGATGGGGGTTAGACCTGCTTATGGTGACGAAAGACCTCATGGTCGGTATGTTGGACGCCCATCTGGCGGCTATGGTCCTGGTGACTGGGATTCAGGAAGGGGTGGTTTTGGTGATGCTTCCTCCACTGGGACTACTCAAAGAGAAGGGTTGATGTCATACAAACAATTTATTCAGGAGCTTGAAGATGACATTCTTCCATCTGAAGCTGAGCGCAGATATCAAGAATACAAGACAGAATATGTGTCCACCCAGAAGCGAGCTTATTTTAATGCTCATAAAGATGAGGACTGGCTGAAAGACAAATATCATCCCACAAATCTGCTCACTGTTATCGAAAGGAGGAACGAACTTGCACAAAAAGTAGCAAAAGATTTTCTGCTTGATCTACAGAGTGGGACCTTGGACTTAGGCCCAGGTGTCAATTCCGCAGCTTCAAATAAACCAGGACACAATAGTGAACCAAATTCTGAAGATGAAACTGACGTGGGTGGCAAGCGGAAACGGCCTGGCAGGGAACCAAATAAAGAAAATGTTCTTCTTTCAGCTGCTCCTAAGGCTCACCCAGTCAGTTCTGAGCCTAAACGTATACAAGTAGACATTGAACAAGCGCAGGCCCTTGTTCGCAAACTTGACTCTGAAAAAGGAATTGTGGAAAACATTTTATATGGACCTGATAATGACAAAAATAGAGAAAAATTGCACGGTGGCTCCACTGGCCCTGTTATTATAATACGGGGTCTGACATCTGTAAAGGGCTTGGAGGGCATTGAGCTACTAGATACTCTTATTACTTATCTCTGGCGCATCCATGGTTTAGATTATTATGGAATGAGTGAATCAAACGAAGCTAAGGGTCTACGGCATGTGAGAGCAGAGGGGAAGAGTTCCAATCTGACTAGTAATGGAAATGAGTGGGAAGAGAAATTAGACTTGCGTTGGCAAGAAAGGTTGCAGAGTCAAGATCCCTTGGAAATAATGACTGCTAAGGAAAAGATAGATACTACTGCTTCCGAATCCTTGGATCCCTATGTTCGGAAGATCAGGGATGAAAAGTATGGCTGGAAGTATGGTTGTGGAGCCAAGGGTTGCACAAAGCTCTTTCATGCTGCTGAGTTTGTGCACAAACATCTTAAATTGAAACACCCTGAACTTGTGATGGAGGTGACTTCCAAACTGCGTGAGGAGCTGTATTTCCAGAATTATATGAATGATGTGGATGCACCTGGTGGAACTCCTATTATGCAGCAACCTGTACTGAGGGACAAACCACAGAGGCGCAGGCCTGTAGAGAATAGATTGAAAGACGAACGTGGTAACCGTAGAGAACGAGACAATCGAGTCAATGGTGGTGAGAGATTTGATAGGTCTGAGAACATGCAATCAGGTGAATTCCAGCCCAATAATGATGGTCCAGATGGAGGGAATCCTGATGAACCGATGTTTGATAATTTTGGAGGGCAAGGAATGCGTGTTGGTCCTCCTTTCCCATCGGATATACCGCCACCACCTGTATTGATGCCTGTGCCTGGTGCTGGTCCGTTAGGACCTTTTGTTCCTGCTCCTCCTGAAGTTGCAATGCAAATGTTGCGAGATCAAGGTGGTCCTCCACCTTTTGAAGGTAGTGGTAGAAATGTGTGGTCTGGACCCCAAATGAGTGGGCCGTCCCCAATTCTTGCTTTATCTCCAGCTTTTCGACAGGATCCTCGACGTTTAAGAAGTTATCAATCGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000381 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0005846 GO:0006139 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010445 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034518 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048024 GO:0048367 GO:0048509 GO:0048519 GO:0048731 GO:0048856 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1903311 GO:1903506 GO:2000011 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARS2 DUF3546

Protein Analysis

738

Amino Acids

83.24

Weight (kDa)

8.6

Isoelectric Point (pI)

72.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SERRATE_Ars2_N PF12066 214 - 295 2.1e-22 SERRATE/Ars2, N-terminal domain
ARS2 PF04959 450 - 657 3.8e-43 Arsenite-resistance protein 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1208
AasI GACNNNNNNGTC 2 cut(s) 519, 1817
Acc36I ACCTGC 1 cut(s) 502
AccI GTMKAC 4 cut(s) 27, 1066, 1074, 1336
AccII CGCG 2 cut(s) 130, 138
AclWI GGATC 6 cut(s) 68, 1436, 1496, 1509, 2174, 2187
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 943, 1868
AcuI CTGAAG 3 cut(s) 702, 969, 2067
AcyI GRCGYC 1 cut(s) 535
AdeI CACNNNGTG 1 cut(s) 1706
AfaI GTAC 1 cut(s) 1734
AgsI TTSAA 7 cut(s) 364, 662, 915, 1082, 1618, 1780, 2096
AhlI ACTAGT 1 cut(s) 1376
AjiI CACGTC 1 cut(s) 964
AjnI CCWGG 8 cut(s) 430, 460, 556, 892, 922, 985, 1702, 2005
AleI CACNNNNGTG 1 cut(s) 933
AloI GAACNNNNNNTCC 2 cut(s) 2016, 2048
Alw21I GWGCWC 1 cut(s) 1602
Alw26I GTCTC 3 cut(s) 159, 351, 1803
Alw44I GTGCAC 1 cut(s) 1598
AlwI GGATC 6 cut(s) 68, 1436, 1496, 1509, 2174, 2187
AoxI GGCC 7 cut(s) 3, 889, 983, 1092, 1195, 1760, 2138
ApaLI GTGCAC 1 cut(s) 1598
ApeKI GCWGC 5 cut(s) 291, 908, 1025, 1586, 1723
ApoI RAATTY 2 cut(s) 943, 1868
Asp700I GAANNNNTTC 1 cut(s) 1011
AspLEI GCGC 6 cut(s) 138, 285, 693, 1090, 1284, 1758
AsuC2I CCSGG 1 cut(s) 287
AsuHPI GGTGA 7 cut(s) 515, 572, 602, 1031, 1654, 1841, 1877
AxyI CCTNAGG 1 cut(s) 1032
BaeGI GKGCMC 1 cut(s) 1602
BaeI ACNNNNGTAYC 2 cut(s) 460, 493
BamHI GGATCC 2 cut(s) 1501, 2179
Bbv12I GWGCWC 1 cut(s) 1602
BbvI GCAGC 5 cut(s) 303, 920, 1012, 1573, 1735
BccI CCATC 9 cut(s) 377, 389, 475, 547, 685, 1630, 1880, 1889, 1975
BceAI ACGGC 3 cut(s) 998, 1355, 2125
BciT130I CCWGG 8 cut(s) 432, 462, 558, 894, 924, 987, 1704, 2007
BciVI GTATCC 1 cut(s) 461
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 3 cut(s) 159, 351, 1803
BcuI ACTAGT 1 cut(s) 1376
BfaI CTAG 4 cut(s) 372, 1256, 1377, 2212
BfmI CTRYAG 2 cut(s) 866, 1764
BfoI RGCGCY 1 cut(s) 286
BfuAI ACCTGC 1 cut(s) 502
BfuI GTATCC 1 cut(s) 461
BglI GCCNNNNNGGC 1 cut(s) 543
BisI GCNGC 9 cut(s) 89, 120, 199, 292, 547, 909, 1026, 1587, 1724
BlpI GCTNAGC 1 cut(s) 687
BlsI GCNGC 9 cut(s) 90, 121, 200, 293, 548, 910, 1027, 1588, 1725
Bme1390I CCNGG 9 cut(s) 287, 432, 462, 558, 894, 924, 987, 1704, 2007
BmgBI CACGTC 1 cut(s) 964
BmiI GGNNCC 9 cut(s) 176, 320, 877, 996, 1189, 1503, 1558, 2125, 2181
BmrFI CCNGG 9 cut(s) 287, 432, 462, 558, 894, 924, 987, 1704, 2007
BmrI ACTGGG 4 cut(s) 186, 574, 615, 1037
BmsI GCATC 4 cut(s) 583, 1293, 1687, 1986
BmuI ACTGGG 4 cut(s) 186, 574, 615, 1037
BplI GAGNNNNNCTC 2 cut(s) 334, 366
BpmI CTGGAG 1 cut(s) 2148
Bpu10I CCTNAGC 2 cut(s) 1329, 1464
Bpu1102I GCTNAGC 1 cut(s) 687
BpuMI CCSGG 1 cut(s) 287
Bsa29I ATCGAT 1 cut(s) 2207
BsaBI GATNNNNATC 1 cut(s) 219
BsaHI GRCGYC 1 cut(s) 535
BsaI GGTCTC 1 cut(s) 351
BsaJI CCNNGG 9 cut(s) 286, 338, 431, 879, 892, 1288, 1446, 1497, 1560
BsaXI ACNNNNNCTCC 6 cut(s) 50, 80, 394, 424, 1172, 1202
Bse1I ACTGG 6 cut(s) 192, 569, 610, 773, 1043, 1198
Bse21I CCTNAGG 1 cut(s) 1032
Bse3DI GCAATG 1 cut(s) 2061
Bse8I GATNNNNATC 1 cut(s) 219
BseBI CCWGG 8 cut(s) 432, 462, 558, 894, 924, 987, 1704, 2007
BseCI ATCGAT 1 cut(s) 2207
BseDI CCNNGG 9 cut(s) 286, 338, 431, 879, 892, 1288, 1446, 1497, 1560
BseGI GGATG 4 cut(s) 787, 1284, 1531, 1702
BseJI GATNNNNATC 1 cut(s) 219
BseMI GCAATG 1 cut(s) 2061
BseMII CTCAG 6 cut(s) 310, 678, 1044, 1581, 1727, 1839
BseNI ACTGG 6 cut(s) 192, 569, 610, 773, 1043, 1198
BseRI GAGGAG 4 cut(s) 339, 432, 1676, 2031
BseSI GKGCMC 1 cut(s) 1602
BseXI GCAGC 5 cut(s) 303, 920, 1012, 1573, 1735
Bsh1236I CGCG 2 cut(s) 130, 138
Bsh1285I CGRYCG 3 cut(s) 184, 217, 475
BshFI GGCC 7 cut(s) 5, 891, 985, 1094, 1197, 1762, 2140
BshVI ATCGAT 1 cut(s) 2207
BsiEI CGRYCG 3 cut(s) 184, 217, 475
BsiHKAI GWGCWC 1 cut(s) 1602
BsiSI CCGG 1 cut(s) 286
BsmAI GTCTC 3 cut(s) 159, 351, 1803
BsmBI CGTCTC 1 cut(s) 159
BsmI GAATGC 1 cut(s) 1950
BsnI GGCC 7 cut(s) 5, 891, 985, 1094, 1197, 1762, 2140
Bso31I GGTCTC 1 cut(s) 351
Bsp1286I GDGCHC 1 cut(s) 1602
Bsp1720I GCTNAGC 1 cut(s) 687
Bsp19I CCATGG 1 cut(s) 1288
Bsp68I TCGCGA 1 cut(s) 130
BspANI GGCC 7 cut(s) 5, 891, 985, 1094, 1197, 1762, 2140
BspCNI CTCAG 6 cut(s) 309, 679, 1045, 1582, 1728, 1840
BspDI ATCGAT 1 cut(s) 2207
BspFNI CGCG 2 cut(s) 130, 138
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 9 cut(s) 176, 320, 877, 996, 1189, 1503, 1558, 2125, 2181
BspMI ACCTGC 1 cut(s) 502
BspPI GGATC 6 cut(s) 68, 1436, 1496, 1509, 2174, 2187
BspTNI GGTCTC 1 cut(s) 351
BsrDI GCAATG 1 cut(s) 2061
BsrI ACTGG 6 cut(s) 192, 569, 610, 773, 1043, 1198
BssECI CCNNGG 9 cut(s) 286, 338, 431, 879, 892, 1288, 1446, 1497, 1560
BssNAI GTATAC 1 cut(s) 1067
BssNI GRCGYC 1 cut(s) 535
BssT1I CCWWGG 5 cut(s) 879, 1288, 1446, 1497, 1560
Bst1107I GTATAC 1 cut(s) 1067
Bst2UI CCWGG 8 cut(s) 432, 462, 558, 894, 924, 987, 1704, 2007
Bst4CI ACNGT 4 cut(s) 41, 808, 1184, 1799
Bst6I CTCTTC 2 cut(s) 1355, 1392
BstACI GRCGYC 1 cut(s) 535
BstAPI GCANNNNNTGC 2 cut(s) 1945, 2065
BstC8I GCNNGC 6 cut(s) 117, 326, 738, 974, 1092, 1760
BstDSI CCRYGG 2 cut(s) 338, 1288
BstEII GGTNACC 1 cut(s) 1793
BstENI CCTNNNNNAGG 2 cut(s) 130, 2094
BstF5I GGATG 4 cut(s) 787, 1284, 1531, 1702
BstFNI CGCG 2 cut(s) 130, 138
BstH2I RGCGCY 1 cut(s) 286
BstHHI GCGC 6 cut(s) 138, 285, 693, 1090, 1284, 1758
BstMAI GTCTC 3 cut(s) 159, 351, 1803
BstMCI CGRYCG 3 cut(s) 184, 217, 475
BstNI CCWGG 8 cut(s) 432, 462, 558, 894, 924, 987, 1704, 2007
BstNSI RCATGY 3 cut(s) 22, 1346, 1858
BstPI GGTNACC 1 cut(s) 1793
BstSCI CCNGG 9 cut(s) 285, 430, 460, 556, 892, 922, 985, 1702, 2005
BstSFI CTRYAG 2 cut(s) 866, 1764
BstSLI GKGCMC 1 cut(s) 1602
BstUI CGCG 2 cut(s) 130, 138
BstV1I GCAGC 5 cut(s) 303, 920, 1012, 1573, 1735
BstX2I RGATCY 4 cut(s) 73, 1441, 1501, 2179
BstXI CCANNNNNNTGG 1 cut(s) 2135
BstYI RGATCY 4 cut(s) 73, 1441, 1501, 2179
BstZ17I GTATAC 1 cut(s) 1067
Bsu15I ATCGAT 1 cut(s) 2207
Bsu36I CCTNAGG 1 cut(s) 1032
BsuI GTATCC 1 cut(s) 461
BsuRI GGCC 7 cut(s) 5, 891, 985, 1094, 1197, 1762, 2140
BsuTUI ATCGAT 1 cut(s) 2207
BtgI CCRYGG 2 cut(s) 338, 1288
BtrI CACGTC 1 cut(s) 964
BtsCI GGATG 4 cut(s) 787, 1284, 1531, 1702
BtsIMutI CAGTG 3 cut(s) 603, 804, 1191
BtuMI TCGCGA 1 cut(s) 130
BveI ACCTGC 1 cut(s) 502
Cac8I GCNNGC 6 cut(s) 117, 326, 738, 974, 1092, 1760
CciI TCATGA 1 cut(s) 12
CfoI GCGC 6 cut(s) 138, 285, 693, 1090, 1284, 1758
ClaI ATCGAT 1 cut(s) 2207
CseI GACGC 1 cut(s) 543
CsiI ACCWGGT 1 cut(s) 1702
Csp6I GTAC 1 cut(s) 1733
CspCI CAANNNNNGTGG 2 cut(s) 1974, 2009
CviAII CATG 7 cut(s) 13, 19, 518, 1289, 1343, 1583, 1855
CviQI GTAC 1 cut(s) 1733
DraIII CACNNNGTG 1 cut(s) 1706
DrdI GACNNNNNNGTC 2 cut(s) 519, 1817
DseDI GACNNNNNNGTC 2 cut(s) 519, 1817
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 1355, 1392
EarI CTCTTC 2 cut(s) 1355, 1392
EciI GGCGGA 4 cut(s) 96, 102, 222, 324
Eco130I CCWWGG 5 cut(s) 879, 1288, 1446, 1497, 1560
Eco147I AGGCCT 1 cut(s) 1762
Eco31I GGTCTC 1 cut(s) 351
Eco32I GATATC 1 cut(s) 698
Eco57I CTGAAG 3 cut(s) 702, 969, 2067
Eco81I CCTNAGG 1 cut(s) 1032
Eco91I GGTNACC 1 cut(s) 1793
EcoNI CCTNNNNNAGG 2 cut(s) 130, 2094
EcoO109I RGGNCCY 4 cut(s) 175, 876, 1093, 2024
EcoO65I GGTNACC 1 cut(s) 1793
EcoRI GAATTC 1 cut(s) 1868
EcoRII CCWGG 8 cut(s) 430, 460, 556, 892, 922, 985, 1702, 2005
EcoRV GATATC 1 cut(s) 698
EcoT14I CCWWGG 5 cut(s) 879, 1288, 1446, 1497, 1560
ErhI CCWWGG 5 cut(s) 879, 1288, 1446, 1497, 1560
Esp3I CGTCTC 1 cut(s) 159
FaeI CATG 7 cut(s) 16, 22, 521, 1292, 1346, 1586, 1858
FatI CATG 7 cut(s) 12, 18, 517, 1288, 1342, 1582, 1854
FauI CCCGC 1 cut(s) 93
FblI GTMKAC 4 cut(s) 27, 1066, 1074, 1336
Fnu4HI GCNGC 9 cut(s) 89, 120, 199, 292, 547, 909, 1026, 1587, 1724
FokI GGATG 4 cut(s) 774, 1271, 1538, 1709
Fsp4HI GCNGC 9 cut(s) 89, 120, 199, 292, 547, 909, 1026, 1587, 1724
FspBI CTAG 4 cut(s) 372, 1256, 1377, 2212
GlaI GCGC 6 cut(s) 137, 284, 692, 1089, 1283, 1757
GluI GCNGC 9 cut(s) 89, 120, 199, 292, 547, 909, 1026, 1587, 1724
GsuI CTGGAG 1 cut(s) 2148
HaeII RGCGCY 1 cut(s) 286
HaeIII GGCC 7 cut(s) 5, 891, 985, 1094, 1197, 1762, 2140
HapII CCGG 1 cut(s) 286
HgaI GACGC 1 cut(s) 543
HhaI GCGC 6 cut(s) 138, 285, 693, 1090, 1284, 1758
Hin1I GRCGYC 1 cut(s) 535
Hin1II CATG 7 cut(s) 16, 22, 521, 1292, 1346, 1586, 1858
Hin6I GCGC 6 cut(s) 136, 283, 691, 1088, 1282, 1756
HinP1I GCGC 6 cut(s) 136, 283, 691, 1088, 1282, 1756
HincII GTYRAC 1 cut(s) 28
HindII GTYRAC 1 cut(s) 28
HinfI GANTC 9 cut(s) 29, 409, 569, 1112, 1316, 1435, 1493, 1818, 1903
HpaII CCGG 1 cut(s) 286
HphI GGTGA 7 cut(s) 515, 572, 602, 1031, 1654, 1841, 1877
Hpy166II GTNNAC 7 cut(s) 28, 726, 938, 1067, 1075, 1337, 1600
Hpy8I GTNNAC 7 cut(s) 28, 726, 938, 1067, 1075, 1337, 1600
Hpy99I CGWCG 3 cut(s) 29, 45, 2190
HpyAV CCTTC 4 cut(s) 126, 570, 617, 2090
HpyCH4III ACNGT 4 cut(s) 41, 808, 1184, 1799
HpyCH4IV ACGT 4 cut(s) 963, 1063, 1789, 2188
HpySE526I ACGT 4 cut(s) 963, 1063, 1789, 2188
Hsp92I GRCGYC 1 cut(s) 535
Hsp92II CATG 7 cut(s) 16, 22, 521, 1292, 1346, 1586, 1858
HspAI GCGC 6 cut(s) 136, 283, 691, 1088, 1282, 1756
LmnI GCTCC 8 cut(s) 109, 230, 655, 1033, 1193, 1556, 1663, 2044
Lsp1109I GCAGC 5 cut(s) 303, 920, 1012, 1573, 1735
LweI GCATC 4 cut(s) 583, 1293, 1687, 1986
MabI ACCWGGT 1 cut(s) 1702
MaeI CTAG 4 cut(s) 372, 1256, 1377, 2212
MaeII ACGT 4 cut(s) 963, 1063, 1789, 2188
MaeIII GTNAC 4 cut(s) 503, 560, 1642, 1793
MboII GAAGA 9 cut(s) 83, 392, 665, 674, 962, 1007, 1372, 1409, 1528
MflI RGATCY 4 cut(s) 73, 1441, 1501, 2179
MhlI GDGCHC 1 cut(s) 1602
MlyI GAGTC 5 cut(s) 23, 418, 1106, 1444, 1827
MmeI TCCRAC 1 cut(s) 511
MroXI GAANNNNTTC 1 cut(s) 1011
MseI TTAA 3 cut(s) 747, 1611, 2192
MslI CAYNNNNRTG 3 cut(s) 17, 759, 933
MspA1I CMGCKG 1 cut(s) 1025
MspI CCGG 1 cut(s) 286
MspR9I CCNGG 9 cut(s) 287, 432, 462, 558, 894, 924, 987, 1704, 2007
Mva1269I GAATGC 1 cut(s) 1950
MvaI CCWGG 8 cut(s) 432, 462, 558, 894, 924, 987, 1704, 2007
MvnI CGCG 2 cut(s) 130, 138
NciI CCSGG 1 cut(s) 287
NcoI CCATGG 1 cut(s) 1288
NlaIII CATG 7 cut(s) 16, 22, 521, 1292, 1346, 1586, 1858
NlaIV GGNNCC 9 cut(s) 176, 320, 877, 996, 1189, 1503, 1558, 2125, 2181
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 3 cut(s) 503, 560, 1642
NruI TCGCGA 1 cut(s) 130
NspI RCATGY 3 cut(s) 22, 1346, 1858
OliI CACNNNNGTG 1 cut(s) 933
PagI TCATGA 1 cut(s) 12
PceI AGGCCT 1 cut(s) 1762
PcsI WCGNNNNNNNCGW 2 cut(s) 1795, 1813
PctI GAATGC 1 cut(s) 1950
PdmI GAANNNNTTC 1 cut(s) 1011
PfeI GAWTC 4 cut(s) 569, 1316, 1493, 1903
PkrI GCNGC 9 cut(s) 90, 121, 200, 293, 548, 910, 1027, 1588, 1725
Ple19I CGATCG 2 cut(s) 217, 475
PleI GAGTC 5 cut(s) 23, 417, 1106, 1443, 1826
PpsI GAGTC 5 cut(s) 23, 417, 1106, 1443, 1826
PpuMI RGGWCCY 3 cut(s) 175, 876, 2024
PsiI TTATAA 1 cut(s) 1208
Psp5II RGGWCCY 3 cut(s) 175, 876, 2024
Psp6I CCWGG 8 cut(s) 430, 460, 556, 892, 922, 985, 1702, 2005
PspEI GGTNACC 1 cut(s) 1793
PspGI CCWGG 8 cut(s) 430, 460, 556, 892, 922, 985, 1702, 2005
PspN4I GGNNCC 9 cut(s) 176, 320, 877, 996, 1189, 1503, 1558, 2125, 2181
PspPPI RGGWCCY 3 cut(s) 175, 876, 2024
PsuI RGATCY 4 cut(s) 73, 1441, 1501, 2179
PvuI CGATCG 2 cut(s) 217, 475
PvuII CAGCTG 1 cut(s) 1025
RruI TCGCGA 1 cut(s) 130
RsaI GTAC 1 cut(s) 1734
RsaNI GTAC 1 cut(s) 1733
RseI CAYNNNNRTG 3 cut(s) 17, 759, 933
SalI GTCGAC 1 cut(s) 26
SaqAI TTAA 3 cut(s) 747, 1611, 2192
SatI GCNGC 9 cut(s) 89, 120, 199, 292, 547, 909, 1026, 1587, 1724
SchI GAGTC 5 cut(s) 23, 418, 1106, 1444, 1827
ScrFI CCNGG 9 cut(s) 287, 432, 462, 558, 894, 924, 987, 1704, 2007
SduI GDGCHC 1 cut(s) 1602
SexAI ACCWGGT 1 cut(s) 1702
SfaNI GCATC 4 cut(s) 583, 1293, 1687, 1986
SfcI CTRYAG 2 cut(s) 866, 1764
SmiMI CAYNNNNRTG 3 cut(s) 17, 759, 933
SpeI ACTAGT 1 cut(s) 1376
SseBI AGGCCT 1 cut(s) 1762
SspMI CTAG 4 cut(s) 372, 1256, 1377, 2212
StuI AGGCCT 1 cut(s) 1762
StyD4I CCNGG 9 cut(s) 285, 430, 460, 556, 892, 922, 985, 1702, 2005
StyI CCWWGG 5 cut(s) 879, 1288, 1446, 1497, 1560
TaaI ACNGT 4 cut(s) 41, 808, 1184, 1799
TaiI ACGT 4 cut(s) 966, 1066, 1792, 2191
TaqI TCGA 9 cut(s) 27, 180, 217, 247, 813, 1816, 2173, 2185, 2207
TatI WGTACW 1 cut(s) 1732
TauI GCSGC 4 cut(s) 91, 122, 201, 549
TfiI GAWTC 4 cut(s) 569, 1316, 1493, 1903
Tru1I TTAA 3 cut(s) 747, 1611, 2192
Tru9I TTAA 3 cut(s) 747, 1611, 2192
TscAI CASTG 3 cut(s) 610, 811, 1198
TseFI GTSAC 3 cut(s) 503, 560, 1642
TseI GCWGC 5 cut(s) 291, 908, 1025, 1586, 1723
Tsp45I GTSAC 3 cut(s) 503, 560, 1642
TspDTI ATGAA 6 cut(s) 29, 969, 1542, 1571, 1700, 1926
TspGWI ACGGA 3 cut(s) 348, 355, 2007
TspRI CASTG 3 cut(s) 610, 811, 1198
VneI GTGCAC 1 cut(s) 1598
XagI CCTNNNNNAGG 2 cut(s) 130, 2094
XapI RAATTY 2 cut(s) 943, 1868
XceI RCATGY 3 cut(s) 22, 1346, 1858
XmiI GTMKAC 4 cut(s) 27, 1066, 1074, 1336
XmnI GAANNNNTTC 1 cut(s) 1011
XspI CTAG 4 cut(s) 372, 1256, 1377, 2212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.