Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0014891

Physical Location & Seq

Genomic Coordinates Forward (+)

27487525 .. 27492340

Gene Structure 4816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3408 bp

ATGGCAAGCAGCAGTGACTCGGCCTACCACTGCGGCAAATCGCTCCTCGACGACCTTGACACCGGCCTCCGAGCTAAGAGAAGGTGGCGGATGGCGTTTTTGGCATTACGTGTTGTCCACGTCATGCTTGAGCTTCCCAAAGAGATGGTATCCACGACAAAAAAATATGGAGACGATGAAACTGGTCGCTACAGTTTTGTGGCCGACGTTGATGATCATGAAGATGCTGGACTTGCAGAAATTGTGAGGGAAAAGAACTCGGCTGCTACACAAAGCCACGATTCGCCTTATGGTTATGGAAAAATGCTCCTCGACATCACCACCACCACCCTCACCCTCACCAGAGCCAAGATGAGATGGCGCATGGCCTACGCAGCAATATATGCTGTTCGGGCAATGCTTTCGCTTCCCAGAGAGCTTCTAAACAAGGGAAACAACTACAAAAAGGACCCCGAGATCTTGGACTCTTATTCTTACACTGCACTGGACGTGAAACCAAGCACTTCCCACCAAGAAATCAATACTGAAGCTGATCGCCTTATTTCCCTCCCCAACATTGAATTTGATCATGTAGGACTCGTACAAATGGTGAAGGATAAAGACTTGGCTGCTCTAAAGAAGTCTGGAGGAGTTATCGGCGTCGCCACTTCTCTTGGGACAAACCCTAAAAATGGAATTCATGGAAATGAGTTAGAAGTCAACAAAAGGCGTGAAATCTTTGGTTCAAATACCTACCACAGGCAGCCTCCAAAAGGGTTGCTCTACTTTGTCCTCGACGCTTTAAAAGACACAACAATTCTGATCCTATGTGTCTGTGCGGCACTTTCTCTCGGATTTGGAATCAAAGAGCATGGAGCGGAGGAAGGCTGGTATGAGGGAGGGAGCATCTTTGTTGCTGTATTCATTGTCATTGTTGTCTCAGCTCTCAGTAACTTCAGACAAGAATTACAGTTCGACAAATTGTCTAAAATCAGTAGCAACATCAAAGTTGAGGTATTTAGAGACAGACAAAGACAAGAAATCTCCATCTTTGATATTGTAGTTGGAGATGTTGTGGTTCTGAACATGGGAGATCAAATACCTGCAGACGGATTGTTCTTAGATGGGTATTCCTTACAAGTGGACGAGTCAAGCATGACGGGAGAGAGTGACCATGTTGAAATTGATTCCGCCGAGAACCCCTTCCTGTTCTCCGGTACAAAGGTGGTAGATGGCCATGCTCGAATGCTTGTCACATCAGTTGGGATAAACACTGCATGGGGAGAAATGATGAGCTCAATATCGCAGGACTCAAATGAACGAACACCATTACAAGCAAGGCTTGACAAACTAACCTCTTCTATTGGAAAGGTGGGCCTCGCAGTTGCCTTCCTAGTTCTTGTAGTCTTGTTGGTTCGTTACTTCACTGGTAACACAAAAGATGAGTATGGAAATACGGAGTATAGTGGTAGCAACAAAGACATTGATAGTGTGTTGAGCGGAGTAGTTCGCATTGTTTCCGATGCAGTCACTATTGTGGTTGTGGCAATCCCGGAAGGTCTGCCCTTGGCCGTCACATTAACACTTGCTTACTCAATGAAAAGAATGATGAAAGATCAATCTATGGTCAGAAAACTACAAGCTTGTGAGACGATGGGATCAGCAACCGTTATTTGTACTGACAAAACAGGAACTTTGACAAAAAATGAAATGGAAGTGACTAAATTTTGTCTTGGCCAAGAAGAAATTGAAAAAGGTAATTCAATCAAACCAAATGTTTGTGAATTATTTCATCAAGGAGTTGGCTTGAACACGACCGGAAGTGTTTACATACCTCCTTTAGGATCAAAACCTGAAATTTCTGGTAGTCCAACAGAGAAAGCAATTCTCTATTGGGCCGTTTCAGATTTGGGTATGGACATGGAAAAGTTGAAGCCTAGATATGACATTCTTCATGTTGAAACGTTTAACTCAGATAAGAAACGAAGCGGGGTTCTTATACAAAAGAAGGATGACAACACCATCCATGTGCACTGGAAAGGAGCTGCTGAGATGATAGTTGCAATGTGCTCGAGTTATTATGAAACCAACGGAACTATAAAGTCCTTGAATGAAGAAGGAAGGTCAAAAATTGAGAATATAATCCAAGCCATGGCAGCTAAAAGCCTCCGGTGCATTGCTTTTGCTCATACTCAAATTTCCGAAAAAGAAATTGAATATAGCGACGATAACAAGACCCACCCAAAGATAAAAGAAGAAGGATTATTTTTGCTAGGGGTAGTTGGTCTCAAAGATCCATGCCGGGCAGGGGTCACCGATGCTGTGAGAATTTGCATGTCTGCAGGCGTGCAAATCAAAATGATTACTGGAGACAATGTTTTCACAGCTAAAGCTATAGCTACAGAATGTGGAATACTAAAGACTGAGGACGCAACAAATGGTGATCAAGTGATAGAGGGAGCAGAATTCCGAAACTACACACACCAAGAGAGAATGAAAAAGGTCAATCAAATTCGCGTGATGGCAAGATCTTCCCCGTTCGACAAGCTATTGATGGTGCAGTGTCTGAGGCAGAAAGGACATGTGGTTGCAGTCACAGGAGATGGCACAAATGATGCTCCTGCACTGAAAGAAGCTGATATAGGACTTTCCATGGGTATCCAAGGTACTGAGGTGGCAAAGGAAAGCTCAGACATCATCATCTTGGACGACAACTTCAATTCTGTGGTCACAGTTTTGAGATGGGGGCGATGTGTTTATAACAATATACAGAAGTTCATCCAGTTTCAATTAACTGTTAACGTCGCAGCTCTAGTAATTAACTTTATCGCAGCAGTTTCAGCTGGCGATGTTCCCCTAACAGCAGTTCAATTGCTGTGGGTGAATCTCATCATGGACACACTAGGCGCTCTCGCCCTTGCTACTGAGCGGCCGACAGATGAGCTAATGCAGAAGAAGCCTGTAGGTCGAAGTGCACCGCTCATAACCAATATTATGTGGAGAAACCTTCTATGCCAAGCTCTATATCAAATAGCCATTCTCTTAACCTTGCAATTCAGTGGCGATTCCATCTTCAATGTCACTGATGCGGTGAATGATACTATGATTTTCAACACATTCGTACTCTGTCAGATTTTCAACGAGTTCAACTCAAGGAGCATGGAGAAGCAGAATGTATTCAAAGGTATTCACAGGAACAAACTGTTTATGGGCATTGTGGGGACAACCATCGTTCTCCAATTTGTGATGGTGGAGTTCCTGAAAAAGTTTGCAGATACAGAGAGGTTGACTTTGTTGCAATGGGTAACTTGTATCGTAATTGCAGCTGTATCATGGCCAATCGGTTGGATTGTGAAGTCGATGCCAGTTCCAGATGAACCATTCTTCAAAACTATCAAGAAGTTACTCAGATTCAAAAGGAATGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1136

Amino Acids

125.62

Weight (kDa)

6.13

Isoelectric Point (pI)

32.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	208 - 276	1e-12	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	328 - 427	8.8e-22	P-type ATPase actuator domain
Cation_ATPase	PF13246	609 - 762	3.8e-30	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	694 - 873	2.8e-11	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	944 - 1113	1.3e-46	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63380
fragaria_vesca	FvH4_2g22900
malus_domestica	MD11G1278100.v1.1
prunus_persica	Prupe.8G234200_v2.0.a1 Prupe.8G234200_v2.0.a1
pyrus_communis	pycom11g24580
rosa_chinensis	RchiOBHm_Chr6g0289831
rosa_laevigata	RLG00000012264
rosa_multiflora	Rmu_sc0032573.1_g000001 Rmu_ssc0000314.1_g000015
rosa_roxburghii	Rroxscaffold_4G00321460 Rroxscaffold_7G00177520 Rroxscaffold_7G00178050
rosa_rugosa	Rorug06G0207300
rosa_samantha	Rh6AG318800
rosa_wichuraiana	Rw6G027500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2739
Acc36I	ACCTGC	1 cut(s)	1090
AccB7I	CCANNNNNTGG	1 cut(s)	2131
AccBSI	CCGCTC	4 cut(s)	857, 1479, 2908, 2959
AccII	CGCG	1 cut(s)	2496
AclI	AACGTT	1 cut(s)	1943
AclWI	GGATC	4 cut(s)	796, 1645, 1831, 2267
AcoI	YGGCCR	6 cut(s)	201, 1213, 1548, 1714, 2909, 3314
AcsI	RAATTY	8 cut(s)	560, 675, 1703, 1836, 2175, 2307, 2444, 2490
AcuI	CTGAAG	2 cut(s)	546, 919
AcyI	GRCGYC	1 cut(s)	639
AfaI	GTAC	5 cut(s)	582, 1198, 1657, 2647, 3102
AfiI	CCNNNNNNNGG	7 cut(s)	671, 738, 752, 1088, 1820, 2131, 2287
AflIII	ACRYGT	2 cut(s)	109, 2560
AhdI	GACNNNNNGTC	1 cut(s)	961
AjiI	CACGTC	2 cut(s)	121, 490
AleI	CACNNNNGTG	1 cut(s)	1514
Alw21I	GWGCWC	4 cut(s)	1277, 2013, 2051, 2956
Alw26I	GTCTC	6 cut(s)	165, 922, 996, 1622, 2270, 2343
Alw44I	GTGCAC	2 cut(s)	2009, 2952
AlwI	GGATC	4 cut(s)	796, 1645, 1831, 2267
AlwNI	CAGNNNCTG	1 cut(s)	2545
Ama87I	CYCGRG	2 cut(s)	452, 2050
ApaLI	GTGCAC	2 cut(s)	2009, 2952
ApoI	RAATTY	8 cut(s)	560, 675, 1703, 1836, 2175, 2307, 2444, 2490
Asp700I	GAANNNNTTC	3 cut(s)	1181, 1767, 3155
AspLEI	GCGC	2 cut(s)	363, 2888
AspS9I	GGNCC	3 cut(s)	448, 1354, 1875
AsuC2I	CCSGG	2 cut(s)	1532, 2282
AsuHPI	GGTGA	8 cut(s)	310, 325, 331, 601, 2284, 2432, 2872, 3082
AvaI	CYCGRG	2 cut(s)	452, 2050
AvaII	GGWCC	1 cut(s)	448
BaeGI	GKGCMC	2 cut(s)	2013, 2956
BaeI	ACNNNNGTAYC	4 cut(s)	1188, 1221, 2637, 2670
BalI	TGGCCA	3 cut(s)	1215, 1716, 3316
BanII	GRGCYC	1 cut(s)	1277
Bbv12I	GWGCWC	4 cut(s)	1277, 2013, 2051, 2956
BceAI	ACGGC	2 cut(s)	1535, 1862
BcgI	CGANNNNNNTGC	4 cut(s)	384, 418, 2031, 2065
BciVI	GTATCC	2 cut(s)	160, 2648
BclI	TGATCA	3 cut(s)	214, 565, 2422
BcnI	CCSGG	2 cut(s)	1532, 2282
BcoDI	GTCTC	6 cut(s)	165, 922, 996, 1622, 2270, 2343
BfaI	CTAG	5 cut(s)	1373, 1917, 2252, 2792, 2882
BfmI	CTRYAG	6 cut(s)	190, 1083, 2319, 2373, 2379, 2940
BfoI	RGCGCY	1 cut(s)	2889
BfuAI	ACCTGC	1 cut(s)	1090
BfuI	GTATCC	2 cut(s)	160, 2648
BglII	AGATCT	2 cut(s)	456, 2507
Bme1390I	CCNGG	2 cut(s)	1532, 2282
Bme18I	GGWCC	1 cut(s)	448
BmeRI	GACNNNNNGTC	1 cut(s)	961
BmeT110I	CYCGRG	2 cut(s)	452, 2050
BmgBI	CACGTC	2 cut(s)	121, 490
BmgT120I	GGNCC	3 cut(s)	448, 1354, 1875
BmiI	GGNNCC	1 cut(s)	450
BmrFI	CCNGG	2 cut(s)	1532, 2282
BmsI	GCATC	7 cut(s)	214, 894, 1492, 2287, 2584, 3055, 3330
BplI	GAGNNNNNCTC	2 cut(s)	3113, 3145
BpmI	CTGGAG	2 cut(s)	645, 2367
BpuEI	CTTGAG	2 cut(s)	149, 3115
BpuMI	CCSGG	2 cut(s)	1532, 2282
BsaAI	YACGTR	1 cut(s)	110
BsaHI	GRCGYC	1 cut(s)	639
BsaI	GGTCTC	1 cut(s)	2270
BsaJI	CCNNGG	4 cut(s)	1545, 2130, 2631, 2641
BsaWI	WCCGGW	3 cut(s)	1193, 1796, 2148
BsaXI	ACNNNNNCTCC	4 cut(s)	1038, 1068, 2340, 2370
Bsc4I	CCNNNNNNNGG	7 cut(s)	671, 738, 752, 1088, 1820, 2131, 2287
Bse118I	RCCGGY	1 cut(s)	62
Bse1I	ACTGG	7 cut(s)	187, 489, 1411, 2018, 2350, 2761, 3344
Bse3DI	GCAATG	4 cut(s)	402, 2049, 2154, 3284
BseDI	CCNNGG	4 cut(s)	1545, 2130, 2631, 2641
BseGI	GGATG	4 cut(s)	96, 1996, 2001, 2757
BseLI	CCNNNNNNNGG	7 cut(s)	671, 738, 752, 1088, 1820, 2131, 2287
BseMI	GCAATG	4 cut(s)	402, 2049, 2154, 3284
BseNI	ACTGG	7 cut(s)	187, 489, 1411, 2018, 2350, 2761, 3344
BseRI	GAGGAG	3 cut(s)	35, 299, 642
BseSI	GKGCMC	2 cut(s)	2013, 2956
BseX3I	CGGCCG	1 cut(s)	2909
BsgI	GTGCAG	3 cut(s)	465, 2558, 2586
Bsh1236I	CGCG	1 cut(s)	2496
Bsh1285I	CGRYCG	2 cut(s)	1797, 2912
BsiEI	CGRYCG	2 cut(s)	1797, 2912
BsiHKAI	GWGCWC	4 cut(s)	1277, 2013, 2051, 2956
BsiHKCI	CYCGRG	2 cut(s)	452, 2050
BsiSI	CCGG	6 cut(s)	63, 1194, 1532, 1797, 2149, 2281
BslFI	GGGAC	2 cut(s)	670, 3214
BslI	CCNNNNNNNGG	7 cut(s)	671, 738, 752, 1088, 1820, 2131, 2287
BsmAI	GTCTC	6 cut(s)	165, 922, 996, 1622, 2270, 2343
BsmBI	CGTCTC	2 cut(s)	165, 1622
BsmFI	GGGAC	2 cut(s)	670, 3214
BsmI	GAATGC	1 cut(s)	1230
Bso31I	GGTCTC	1 cut(s)	2270
BsoBI	CYCGRG	2 cut(s)	452, 2050
Bsp1286I	GDGCHC	4 cut(s)	1277, 2013, 2051, 2956
Bsp19I	CCATGG	2 cut(s)	2130, 2631
BspFNI	CGCG	1 cut(s)	2496
BspHI	TCATGA	1 cut(s)	217
BspLI	GGNNCC	1 cut(s)	450
BspMAI	CTGCAG	2 cut(s)	1087, 2323
BspMI	ACCTGC	1 cut(s)	1090
BspPI	GGATC	4 cut(s)	796, 1645, 1831, 2267
BspTNI	GGTCTC	1 cut(s)	2270
BsrBI	CCGCTC	4 cut(s)	857, 1479, 2908, 2959
BsrDI	GCAATG	4 cut(s)	402, 2049, 2154, 3284
BsrFI	RCCGGY	1 cut(s)	62
BsrI	ACTGG	7 cut(s)	187, 489, 1411, 2018, 2350, 2761, 3344
BssAI	RCCGGY	1 cut(s)	62
BssECI	CCNNGG	4 cut(s)	1545, 2130, 2631, 2641
BssNI	GRCGYC	1 cut(s)	639
BssT1I	CCWWGG	4 cut(s)	1545, 2130, 2631, 2641
Bst4CI	ACNGT	6 cut(s)	194, 951, 1648, 2713, 2776, 3183
Bst6I	CTCTTC	1 cut(s)	1342
BstACI	GRCGYC	1 cut(s)	639
BstAPI	GCANNNNNTGC	1 cut(s)	383
BstBAI	YACGTR	1 cut(s)	110
BstC8I	GCNNGC	4 cut(s)	7, 2323, 2327, 2824
BstDSI	CCRYGG	2 cut(s)	2130, 2631
BstEII	GGTNACC	1 cut(s)	2290
BstENI	CCTNNNNNAGG	3 cut(s)	736, 750, 1818
BstF5I	GGATG	4 cut(s)	96, 1996, 2001, 2757
BstFNI	CGCG	1 cut(s)	2496
BstH2I	RGCGCY	1 cut(s)	2889
BstHHI	GCGC	2 cut(s)	363, 2888
BstMAI	GTCTC	6 cut(s)	165, 922, 996, 1622, 2270, 2343
BstMCI	CGRYCG	2 cut(s)	1797, 2912
BstMWI	GCNNNNNNNGC	9 cut(s)	101, 233, 374, 383, 392, 2135, 2151, 2819, 2935
BstNSI	RCATGY	2 cut(s)	2317, 2564
BstPI	GGTNACC	1 cut(s)	2290
BstSCI	CCNGG	2 cut(s)	1530, 2280
BstSFI	CTRYAG	6 cut(s)	190, 1083, 2319, 2373, 2379, 2940
BstSLI	GKGCMC	2 cut(s)	2013, 2956
BstUI	CGCG	1 cut(s)	2496
BstX2I	RGATCY	3 cut(s)	456, 2272, 2507
BstXI	CCANNNNNNTGG	2 cut(s)	145, 3324
BstYI	RGATCY	3 cut(s)	456, 2272, 2507
BstZI	CGGCCG	1 cut(s)	2909
BsuI	GTATCC	2 cut(s)	160, 2648
BtgI	CCRYGG	2 cut(s)	2130, 2631
BtgZI	GCGATG	2 cut(s)	2743, 2841
BtrI	CACGTC	2 cut(s)	121, 490
BtsCI	GGATG	4 cut(s)	96, 1996, 2001, 2757
BtsI	GCAGTG	5 cut(s)	19, 28, 477, 1251, 2546
BveI	ACCTGC	1 cut(s)	1090
Cac8I	GCNNGC	4 cut(s)	7, 2323, 2327, 2824
CaiI	CAGNNNCTG	1 cut(s)	2545
CciI	TCATGA	1 cut(s)	217
CfoI	GCGC	2 cut(s)	363, 2888
Cfr10I	RCCGGY	1 cut(s)	62
Cfr13I	GGNCC	3 cut(s)	448, 1354, 1875
CseI	GACGC	3 cut(s)	628, 785, 2417
Csp6I	GTAC	5 cut(s)	581, 1197, 1656, 2646, 3101
CspCI	CAANNNNNGTGG	4 cut(s)	634, 669, 2837, 2872
CviQI	GTAC	5 cut(s)	581, 1197, 1656, 2646, 3101
DraI	TTTAAA	1 cut(s)	783
DriI	GACNNNNNGTC	1 cut(s)	961
EaeI	YGGCCR	6 cut(s)	201, 1213, 1548, 1714, 2909, 3314
EagI	CGGCCG	1 cut(s)	2909
Eam1104I	CTCTTC	1 cut(s)	1342
Eam1105I	GACNNNNNGTC	1 cut(s)	961
EarI	CTCTTC	1 cut(s)	1342
EciI	GGCGGA	2 cut(s)	103, 1159
Ecl136II	GAGCTC	1 cut(s)	1275
EclXI	CGGCCG	1 cut(s)	2909
Eco130I	CCWWGG	4 cut(s)	1545, 2130, 2631, 2641
Eco24I	GRGCYC	1 cut(s)	1277
Eco31I	GGTCTC	1 cut(s)	2270
Eco47I	GGWCC	1 cut(s)	448
Eco52I	CGGCCG	1 cut(s)	2909
Eco53kI	GAGCTC	1 cut(s)	1275
Eco57I	CTGAAG	2 cut(s)	546, 919
Eco88I	CYCGRG	2 cut(s)	452, 2050
Eco91I	GGTNACC	1 cut(s)	2290
EcoICRI	GAGCTC	1 cut(s)	1275
EcoNI	CCTNNNNNAGG	3 cut(s)	736, 750, 1818
EcoO109I	RGGNCCY	1 cut(s)	448
EcoO65I	GGTNACC	1 cut(s)	2290
EcoRI	GAATTC	2 cut(s)	675, 2444
EcoT14I	CCWWGG	4 cut(s)	1545, 2130, 2631, 2641
EcoT38I	GRGCYC	1 cut(s)	1277
ErhI	CCWWGG	4 cut(s)	1545, 2130, 2631, 2641
Esp3I	CGTCTC	2 cut(s)	165, 1622
FalI	AAGNNNNNCTT	2 cut(s)	1305, 1337
FaqI	GGGAC	2 cut(s)	670, 3214
FauI	CCCGC	1 cut(s)	1961
FbaI	TGATCA	3 cut(s)	214, 565, 2422
FokI	GGATG	4 cut(s)	103, 1988, 2003, 2744
FriOI	GRGCYC	1 cut(s)	1277
FspBI	CTAG	5 cut(s)	1373, 1917, 2252, 2792, 2882
GlaI	GCGC	2 cut(s)	362, 2887
GsuI	CTGGAG	2 cut(s)	645, 2367
HaeII	RGCGCY	1 cut(s)	2889
HapII	CCGG	6 cut(s)	63, 1194, 1532, 1797, 2149, 2281
HgaI	GACGC	3 cut(s)	628, 785, 2417
HhaI	GCGC	2 cut(s)	363, 2888
Hin1I	GRCGYC	1 cut(s)	639
Hin6I	GCGC	2 cut(s)	361, 2886
HinP1I	GCGC	2 cut(s)	361, 2886
HincII	GTYRAC	3 cut(s)	700, 2779, 3267
HindII	GTYRAC	3 cut(s)	700, 2779, 3267
HindIII	AAGCTT	1 cut(s)	1620
HpaI	GTTAAC	1 cut(s)	2779
HpaII	CCGG	6 cut(s)	63, 1194, 1532, 1797, 2149, 2281
HphI	GGTGA	8 cut(s)	310, 325, 331, 601, 2284, 2432, 2872, 3082
Hpy166II	GTNNAC	8 cut(s)	118, 700, 1123, 1807, 2011, 2779, 2954, 3267
Hpy188III	TCNNGA	5 cut(s)	218, 624, 3238, 3350, 3376
Hpy8I	GTNNAC	8 cut(s)	118, 700, 1123, 1807, 2011, 2779, 2954, 3267
Hpy99I	CGWCG	6 cut(s)	53, 209, 644, 779, 2207, 2786
HpyCH4III	ACNGT	6 cut(s)	194, 951, 1648, 2713, 2776, 3183
HpyCH4IV	ACGT	6 cut(s)	109, 120, 207, 489, 1943, 2781
HpyF10VI	GCNNNNNNNGC	9 cut(s)	101, 233, 374, 383, 392, 2135, 2151, 2819, 2935
HpySE526I	ACGT	6 cut(s)	109, 120, 207, 489, 1943, 2781
Hsp92I	GRCGYC	1 cut(s)	639
HspAI	GCGC	2 cut(s)	361, 2886
Ksp22I	TGATCA	3 cut(s)	214, 565, 2422
KspAI	GTTAAC	1 cut(s)	2779
LmnI	GCTCC	8 cut(s)	48, 312, 854, 882, 2021, 2438, 2602, 3135
LweI	GCATC	7 cut(s)	214, 894, 1492, 2287, 2584, 3055, 3330
MaeI	CTAG	5 cut(s)	1373, 1917, 2252, 2792, 2882
MaeII	ACGT	6 cut(s)	109, 120, 207, 489, 1943, 2781
MbiI	CCGCTC	4 cut(s)	857, 1479, 2908, 2959
MfeI	CAATTG	1 cut(s)	2849
MflI	RGATCY	3 cut(s)	456, 2272, 2507
MhlI	GDGCHC	4 cut(s)	1277, 2013, 2051, 2956
MlsI	TGGCCA	3 cut(s)	1215, 1716, 3316
MluNI	TGGCCA	3 cut(s)	1215, 1716, 3316
MlyI	GAGTC	5 cut(s)	11, 458, 570, 1136, 1283
MmeI	TCCRAC	3 cut(s)	1024, 1874, 3305
Mox20I	TGGCCA	3 cut(s)	1215, 1716, 3316
MroXI	GAANNNNTTC	3 cut(s)	1181, 1767, 3155
MscI	TGGCCA	3 cut(s)	1215, 1716, 3316
MseI	TTAA	7 cut(s)	782, 1559, 1947, 2771, 2778, 2799, 3023
MslI	CAYNNNNRTG	4 cut(s)	222, 684, 1514, 2006
Msp20I	TGGCCA	3 cut(s)	1215, 1716, 3316
MspA1I	CMGCKG	2 cut(s)	2822, 3305
MspI	CCGG	6 cut(s)	63, 1194, 1532, 1797, 2149, 2281
MspR9I	CCNGG	2 cut(s)	1532, 2282
MunI	CAATTG	1 cut(s)	2849
Mva1269I	GAATGC	1 cut(s)	1230
MvnI	CGCG	1 cut(s)	2496
MwoI	GCNNNNNNNGC	9 cut(s)	101, 233, 374, 383, 392, 2135, 2151, 2819, 2935
NciI	CCSGG	2 cut(s)	1532, 2282
NcoI	CCATGG	2 cut(s)	2130, 2631
NlaIV	GGNNCC	1 cut(s)	450
NmeAIII	GCCGAG	2 cut(s)	239, 1198
NspI	RCATGY	2 cut(s)	2317, 2564
OliI	CACNNNNGTG	1 cut(s)	1514
PaeR7I	CTCGAG	1 cut(s)	2050
PagI	TCATGA	1 cut(s)	217
PciI	ACATGT	1 cut(s)	2560
PctI	GAATGC	1 cut(s)	1230
PdmI	GAANNNNTTC	3 cut(s)	1181, 1767, 3155
PfeI	GAWTC	6 cut(s)	281, 840, 1166, 2863, 3044, 3390
PflMI	CCANNNNNTGG	1 cut(s)	2131
PfoI	TCCNGGA	1 cut(s)	1530
PleI	GAGTC	5 cut(s)	11, 458, 570, 1135, 1283
PpsI	GAGTC	5 cut(s)	11, 458, 570, 1135, 1283
Ppu21I	YACGTR	1 cut(s)	110
PpuMI	RGGWCCY	1 cut(s)	448
PscI	ACATGT	1 cut(s)	2560
PsiI	TTATAA	1 cut(s)	2739
Psp124BI	GAGCTC	1 cut(s)	1277
Psp1406I	AACGTT	1 cut(s)	1943
Psp5II	RGGWCCY	1 cut(s)	448
PspEI	GGTNACC	1 cut(s)	2290
PspN4I	GGNNCC	1 cut(s)	450
PspPI	GGNCC	3 cut(s)	448, 1354, 1875
PspPPI	RGGWCCY	1 cut(s)	448
PspXI	VCTCGAGB	1 cut(s)	2050
PstI	CTGCAG	2 cut(s)	1087, 2323
PstNI	CAGNNNCTG	1 cut(s)	2545
PsuI	RGATCY	3 cut(s)	456, 2272, 2507
PvuII	CAGCTG	2 cut(s)	2822, 3305
RsaI	GTAC	5 cut(s)	582, 1198, 1657, 2647, 3102
RsaNI	GTAC	5 cut(s)	581, 1197, 1656, 2646, 3101
RseI	CAYNNNNRTG	4 cut(s)	222, 684, 1514, 2006
SacI	GAGCTC	1 cut(s)	1277
SaqAI	TTAA	7 cut(s)	782, 1559, 1947, 2771, 2778, 2799, 3023
Sau96I	GGNCC	3 cut(s)	448, 1354, 1875
SchI	GAGTC	5 cut(s)	11, 458, 570, 1136, 1283
ScrFI	CCNGG	2 cut(s)	1532, 2282
SduI	GDGCHC	4 cut(s)	1277, 2013, 2051, 2956
SfaNI	GCATC	7 cut(s)	214, 894, 1492, 2287, 2584, 3055, 3330
SfcI	CTRYAG	6 cut(s)	190, 1083, 2319, 2373, 2379, 2940
Sfr274I	CTCGAG	1 cut(s)	2050
SinI	GGWCC	1 cut(s)	448
SlaI	CTCGAG	1 cut(s)	2050
SmiMI	CAYNNNNRTG	4 cut(s)	222, 684, 1514, 2006
SmlI	CTYRAG	3 cut(s)	128, 2050, 3130
SmoI	CTYRAG	3 cut(s)	128, 2050, 3130
SspI	AATATT	1 cut(s)	2971
SspMI	CTAG	5 cut(s)	1373, 1917, 2252, 2792, 2882
SstI	GAGCTC	1 cut(s)	1277
StyD4I	CCNGG	2 cut(s)	1530, 2280
StyI	CCWWGG	4 cut(s)	1545, 2130, 2631, 2641
TaaI	ACNGT	6 cut(s)	194, 951, 1648, 2713, 2776, 3183
TaiI	ACGT	6 cut(s)	112, 123, 210, 492, 1946, 2784
TaqI	TCGA	9 cut(s)	48, 312, 774, 954, 1222, 2051, 2520, 2947, 3338
TatI	WGTACW	1 cut(s)	1655
TauI	GCSGC	3 cut(s)	36, 821, 2911
TfiI	GAWTC	6 cut(s)	281, 840, 1166, 2863, 3044, 3390
Tru1I	TTAA	7 cut(s)	782, 1559, 1947, 2771, 2778, 2799, 3023
Tru9I	TTAA	7 cut(s)	782, 1559, 1947, 2771, 2778, 2799, 3023
TspGWI	ACGGA	3 cut(s)	1104, 1451, 2085
Van91I	CCANNNNNTGG	1 cut(s)	2131
VneI	GTGCAC	2 cut(s)	2009, 2952
VpaK11BI	GGWCC	1 cut(s)	448
XagI	CCTNNNNNAGG	3 cut(s)	736, 750, 1818
XapI	RAATTY	8 cut(s)	560, 675, 1703, 1836, 2175, 2307, 2444, 2490
XceI	RCATGY	2 cut(s)	2317, 2564
XhoI	CTCGAG	1 cut(s)	2050
XmnI	GAANNNNTTC	3 cut(s)	1181, 1767, 3155
XspI	CTAG	5 cut(s)	1373, 1917, 2252, 2792, 2882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.