pycom11g25840

oxidoreductase, 2OG-Fe(II) oxygenase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0010863
Physical Location & Seq
Forward (+)
28538307 .. 28542977
4671 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g25840.1

Sequence Viewer

Length: 1638 bp
ATGTCGATGGCGGTTGGGCCAGGGGTGTCGCTGAGTGATGGAGCCGCCCCGGTGCTGGGACCCGCAATGATGCCGATGCCGGCTCCGGTGACGGTGGTATCAGACGCGGTGGCGAAGGACGCTATTATTGGTTGGTACAAAGGAGAATTTGCGGCGGCAAACGCGATCATCGACGCCCTCTGTGGGCACCTGGCTCAGCTCAGCGGAGGAGGTGACGAGTACGCCTCCGTTTTCGCGGCGATACACCGAAGGAGGATCAATTGGATCCCGGTGCTCCAGATGCAGAATTACCACTCCATTGCCGATGTGATGGTGGAGCTCCGAAACGTCGGGTCGAAGAAGGTGGAGATGGAGGACCAGAAGGCCTGCGTCGAGAACGGCGACGTTTCGAGAACAGAGGAAAATTGCAAGAGCGAGGAGGTTAAACCGTGTTTGGACGAAGAGAAAGTGAAGGAAAGTGACGAGAAAGTGGCGGAGAGTAATGGAATTCGCGCCGCCGCCGACGAGGTAGCCGATGAGGAGGCTTCGCCGGATAGCGAGATTACTGATGCAGGTTCACAAGAAGCGCAGCTCAATTCAGTAAACGAGGAAATATGCTCTAATCATGATGAGTGTGAGGCACGTCGTACCCAGATCAAATTGACTAAAGGTTTCTCAGCAAAGGAGTCGGTCAAGGGGCATATGGTGAATGTCGTGAAAGGGTTGAAGCTATATGAGGACATATTCGCTGACACTGAGCTCTGCAAATTGACTGACCTTGTAAATGATCTCCACGCGGCTGGAATTAATGGAGAGCTCTCAGGCGAGACCTTCATTTTGTTCAACAAGCAGGTTAAGGGAAACAGGAGAGAGCTTATTCAGTTTGGCGTTCCAATTTTCGGGCAGATCAAGGAGGATACTACAAGCAATATAGTGCCGATTCCAGCTCTTCTCGACGATGTGATTGATCACTTTGTACTATGGCAGCTAATTCCGGAGTATAAACGACCGAATGGTTGCATGATCAACTTCTTTGAGGAGGGAGAATATTCACAGCCATTCCTGAAACCACCGCATTTGGACCAGCCCATTGCCACTCTTCTCCTCTCTGAATCAGCAATGGCTTTCGGGCGCACCCTTCTGAGCGATAATGATGGGAACTACAAGGGGCCGCTGATGCTATCACTGAAACAAGGGTCCCTTTTAGTCATGAGGGGAAACAGTGCTGACATGTCACGACACGTGATGTGTCCATCTCCTAACAGAAGGGTGAGCATTACTTTCTTCAGAGTCCGAGTAGACTCCAACCAGTTCCAGTCGCCCCAAAGTCCAACAAACAATGGTGCCATGACTCTATGGCAACCCGGGATGGTAAGCCCATACACGATGCCAGATGGAGCAGCTCCCAATGGTTATGAGGCAATGGATGTGATGCCCAAATGGGGTGTCCTTCGTGCTCCAGTAGTCATGGTAGCCCCCGTTCGTCCTATGGTATTGAGCCCTCAAAAAGTCCCTCAAAGTGGTACAGGGGTTTTCTTGCCCTGGACCATGGGATCAAGAAAACCAGCAAAACATCTCCCACCTCGCGCCCAAAAGGGACGGCTTATGGCACTCCCTTCCCCTGCAGAGTCCAGTTCTGAGCCCGGCATCAGTGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy

Protein Analysis

546

Amino Acids

59.34

Weight (kDa)

5.17

Isoelectric Point (pI)

50.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy PF03171 331 - 423 1.5e-06 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010863)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02940
fragaria_vesca FvH4_2g24110 FvH4_2g24110 FvH4_2g24110
malus_domestica MD03G1271100.v1.1 MD11G1291700.v1.1
prunus_persica Prupe.8G247100_v2.0.a1
pyrus_communis pycom03g21580 pycom11g25840
rosa_chinensis RchiOBHm_Chr6g0291901
rosa_laevigata RLG00000012080
rosa_multiflora Rmu_sc0002484.1_g000006 Rmu_sc0002484.1_g000007
rosa_roxburghii Rroxscaffold_7G00175640
rosa_rugosa Rorug06G0221700
rosa_samantha Rh6AG335200 Rh6BG342600 Rh6CG348800 Rh6DG335400
rosa_wichuraiana Rw6G029170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 542, 820
AccB1I GGYRCC 2 cut(s) 186, 1322
AccI GTMKAC 1 cut(s) 1278
AccII CGCG 6 cut(s) 107, 164, 236, 492, 776, 1566
AccIII TCCGGA 1 cut(s) 973
AclWI GGATC 4 cut(s) 259, 263, 272, 1540
AcsI RAATTY 2 cut(s) 146, 486
AcuI CTGAAG 1 cut(s) 1249
AcvI CACGTG 1 cut(s) 1222
AcyI GRCGYC 1 cut(s) 174
AfaI GTAC 5 cut(s) 137, 221, 628, 957, 1504
AfiI CCNNNNNNNGG 6 cut(s) 55, 56, 183, 878, 1421, 1499
AflIII ACRYGT 2 cut(s) 1209, 1219
AgsI TTSAA 2 cut(s) 706, 823
AjiI CACGTC 1 cut(s) 623
AjnI CCWGG 3 cut(s) 19, 189, 1520
Alw21I GWGCWC 5 cut(s) 276, 321, 741, 798, 1438
Alw26I GTCTC 1 cut(s) 800
AlwI GGATC 4 cut(s) 259, 263, 272, 1540
Ama87I CYCGRG 1 cut(s) 1343
Aor13HI TCCGGA 1 cut(s) 973
AoxI GGCC 3 cut(s) 17, 363, 1148
ApeKI GCWGC 3 cut(s) 568, 964, 1379
ApoI RAATTY 2 cut(s) 146, 486
ArsI GACNNNNNNTTYG 4 cut(s) 799, 831, 1410, 1442
AseI ATTAAT 1 cut(s) 786
AspLEI GCGC 4 cut(s) 494, 568, 1113, 1568
AspS9I GGNCC 7 cut(s) 17, 59, 355, 1060, 1148, 1176, 1524
AsuC2I CCSGG 5 cut(s) 50, 269, 1344, 1345, 1623
AsuHPI GGTGA 4 cut(s) 100, 224, 697, 1261
AvaI CYCGRG 1 cut(s) 1343
AvaII GGWCC 5 cut(s) 59, 355, 1060, 1176, 1524
BaeGI GKGCMC 1 cut(s) 189
BaeI ACNNNNGTAYC 4 cut(s) 81, 114, 1494, 1527
BamHI GGATCC 1 cut(s) 264
BanI GGYRCC 2 cut(s) 186, 1322
BanII GRGCYC 5 cut(s) 321, 741, 798, 1481, 1623
BbrPI CACGTG 1 cut(s) 1222
Bbv12I GWGCWC 5 cut(s) 276, 321, 741, 798, 1438
BbvI GCAGC 3 cut(s) 580, 976, 1391
BccI CCATC 7 cut(s) 32, 304, 343, 1127, 1240, 1342, 1367
BceAI ACGGC 2 cut(s) 394, 1595
BcgI CGANNNNNNTGC 2 cut(s) 648, 682
BciT130I CCWGG 3 cut(s) 21, 191, 1522
BciVI GTATCC 1 cut(s) 889
BclI TGATCA 2 cut(s) 946, 1002
BcnI CCSGG 5 cut(s) 50, 269, 1344, 1345, 1623
BcoDI GTCTC 1 cut(s) 800
BfmI CTRYAG 1 cut(s) 1602
BfuAI ACCTGC 2 cut(s) 542, 820
BfuI GTATCC 1 cut(s) 889
BlpI GCTNAGC 2 cut(s) 195, 200
Bme1390I CCNGG 8 cut(s) 21, 50, 191, 269, 1344, 1345, 1522, 1623
Bme18I GGWCC 5 cut(s) 59, 355, 1060, 1176, 1524
BmeT110I CYCGRG 1 cut(s) 1343
BmgBI CACGTC 1 cut(s) 623
BmgT120I GGNCC 7 cut(s) 17, 59, 355, 1060, 1148, 1176, 1524
BmrFI CCNGG 8 cut(s) 21, 50, 191, 269, 1344, 1345, 1522, 1623
BmsI GCATC 7 cut(s) 60, 66, 270, 538, 1146, 1356, 1401
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpmI CTGGAG 2 cut(s) 260, 1422
Bpu1102I GCTNAGC 2 cut(s) 195, 200
BpuMI CCSGG 5 cut(s) 50, 269, 1344, 1345, 1623
BsaAI YACGTR 1 cut(s) 1222
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 800
BsaJI CCNNGG 5 cut(s) 20, 48, 1343, 1520, 1527
BsaWI WCCGGW 2 cut(s) 85, 973
Bsc4I CCNNNNNNNGG 6 cut(s) 55, 56, 183, 878, 1421, 1499
Bse118I RCCGGY 1 cut(s) 79
Bse1I ACTGG 4 cut(s) 1288, 1294, 1439, 1611
Bse3DI GCAATG 5 cut(s) 72, 297, 1068, 1104, 1407
BseAI TCCGGA 1 cut(s) 973
BseBI CCWGG 3 cut(s) 21, 191, 1522
BseDI CCNNGG 5 cut(s) 20, 48, 1343, 1520, 1527
BseGI GGATG 2 cut(s) 1353, 1411
BseLI CCNNNNNNNGG 6 cut(s) 55, 56, 183, 878, 1421, 1499
BseMI GCAATG 5 cut(s) 72, 297, 1068, 1104, 1407
BseMII CTCAG 8 cut(s) 23, 209, 214, 669, 726, 813, 1112, 1608
BseNI ACTGG 4 cut(s) 1288, 1294, 1439, 1611
BseRI GAGGAG 5 cut(s) 222, 431, 533, 1031, 1073
BseSI GKGCMC 1 cut(s) 189
BseXI GCAGC 3 cut(s) 580, 976, 1391
BseYI CCCAGC 1 cut(s) 55
Bsh1236I CGCG 6 cut(s) 107, 164, 236, 492, 776, 1566
Bsh1285I CGRYCG 1 cut(s) 989
BshFI GGCC 3 cut(s) 19, 365, 1150
BshNI GGYRCC 2 cut(s) 186, 1322
BsiEI CGRYCG 1 cut(s) 989
BsiHKAI GWGCWC 5 cut(s) 276, 321, 741, 798, 1438
BsiHKCI CYCGRG 1 cut(s) 1343
BsiSI CCGG 8 cut(s) 50, 80, 86, 269, 530, 974, 1344, 1623
BslFI GGGAC 4 cut(s) 72, 1162, 1475, 1590
BslI CCNNNNNNNGG 6 cut(s) 55, 56, 183, 878, 1421, 1499
BsmAI GTCTC 1 cut(s) 800
BsmFI GGGAC 4 cut(s) 72, 1162, 1475, 1590
BsnI GGCC 3 cut(s) 19, 365, 1150
Bso31I GGTCTC 1 cut(s) 800
BsoBI CYCGRG 1 cut(s) 1343
Bsp1286I GDGCHC 8 cut(s) 189, 276, 321, 741, 798, 1438, 1481, 1623
Bsp13I TCCGGA 1 cut(s) 973
Bsp143I GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
Bsp1720I GCTNAGC 2 cut(s) 195, 200
Bsp19I CCATGG 1 cut(s) 1527
BspANI GGCC 3 cut(s) 19, 365, 1150
BspCNI CTCAG 8 cut(s) 24, 208, 213, 668, 727, 812, 1113, 1609
BspEI TCCGGA 1 cut(s) 973
BspFNI CGCG 6 cut(s) 107, 164, 236, 492, 776, 1566
BspHI TCATGA 2 cut(s) 604, 1188
BspMAI CTGCAG 1 cut(s) 1606
BspMI ACCTGC 2 cut(s) 542, 820
BspPI GGATC 4 cut(s) 259, 263, 272, 1540
BspQI GCTCTTC 1 cut(s) 933
BspT107I GGYRCC 2 cut(s) 186, 1322
BspTNI GGTCTC 1 cut(s) 800
BsrDI GCAATG 5 cut(s) 72, 297, 1068, 1104, 1407
BsrFI RCCGGY 1 cut(s) 79
BsrI ACTGG 4 cut(s) 1288, 1294, 1439, 1611
BssAI RCCGGY 1 cut(s) 79
BssECI CCNNGG 5 cut(s) 20, 48, 1343, 1520, 1527
BssMI GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
BssNI GRCGYC 1 cut(s) 174
BssT1I CCWWGG 1 cut(s) 1527
Bst2UI CCWGG 3 cut(s) 21, 191, 1522
Bst4CI ACNGT 3 cut(s) 94, 429, 1202
Bst6I CTCTTC 3 cut(s) 435, 933, 1083
BstACI GRCGYC 1 cut(s) 174
BstBAI YACGTR 1 cut(s) 1222
BstC8I GCNNGC 2 cut(s) 81, 367
BstDEI CTNAG 8 cut(s) 32, 195, 200, 655, 735, 799, 1121, 1617
BstDSI CCRYGG 1 cut(s) 1527
BstF5I GGATG 2 cut(s) 1353, 1411
BstFNI CGCG 6 cut(s) 107, 164, 236, 492, 776, 1566
BstHHI GCGC 4 cut(s) 494, 568, 1113, 1568
BstKTI GATC 9 cut(s) 168, 258, 267, 636, 769, 888, 949, 1005, 1535
BstMAI GTCTC 1 cut(s) 800
BstMBI GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
BstMCI CGRYCG 1 cut(s) 989
BstMWI GCNNNNNNNGC 4 cut(s) 119, 161, 280, 1156
BstNI CCWGG 3 cut(s) 21, 191, 1522
BstNSI RCATGY 1 cut(s) 1213
BstSCI CCNGG 8 cut(s) 19, 48, 189, 267, 1342, 1343, 1520, 1621
BstSFI CTRYAG 1 cut(s) 1602
BstSLI GKGCMC 1 cut(s) 189
BstUI CGCG 6 cut(s) 107, 164, 236, 492, 776, 1566
BstV1I GCAGC 3 cut(s) 580, 976, 1391
BstX2I RGATCY 1 cut(s) 264
BstXI CCANNNNNNTGG 1 cut(s) 779
BstYI RGATCY 1 cut(s) 264
BsuI GTATCC 1 cut(s) 889
BsuRI GGCC 3 cut(s) 19, 365, 1150
BtgI CCRYGG 1 cut(s) 1527
BtrI CACGTC 1 cut(s) 623
BtsCI GGATG 2 cut(s) 1353, 1411
BtsIMutI CAGTG 4 cut(s) 732, 1163, 1207, 1636
BveI ACCTGC 2 cut(s) 542, 820
Cac8I GCNNGC 2 cut(s) 81, 367
CciI TCATGA 2 cut(s) 604, 1188
CfoI GCGC 4 cut(s) 494, 568, 1113, 1568
Cfr10I RCCGGY 1 cut(s) 79
Cfr13I GGNCC 7 cut(s) 17, 59, 355, 1060, 1148, 1176, 1524
Cfr9I CCCGGG 1 cut(s) 1343
CseI GACGC 4 cut(s) 113, 128, 182, 358
Csp6I GTAC 5 cut(s) 136, 220, 627, 956, 1503
CspCI CAANNNNNGTGG 2 cut(s) 1038, 1073
CviAII CATG 7 cut(s) 605, 1000, 1189, 1210, 1327, 1447, 1528
CviQI GTAC 5 cut(s) 136, 220, 627, 956, 1503
DdeI CTNAG 8 cut(s) 32, 195, 200, 655, 735, 799, 1121, 1617
DpnI GATC 9 cut(s) 167, 257, 266, 635, 768, 887, 948, 1004, 1534
DpnII GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
Eam1104I CTCTTC 3 cut(s) 435, 933, 1083
EarI CTCTTC 3 cut(s) 435, 933, 1083
EciI GGCGGA 1 cut(s) 488
Ecl136II GAGCTC 3 cut(s) 319, 739, 796
Eco130I CCWWGG 1 cut(s) 1527
Eco147I AGGCCT 1 cut(s) 365
Eco24I GRGCYC 5 cut(s) 321, 741, 798, 1481, 1623
Eco31I GGTCTC 1 cut(s) 800
Eco47I GGWCC 5 cut(s) 59, 355, 1060, 1176, 1524
Eco53kI GAGCTC 3 cut(s) 319, 739, 796
Eco57I CTGAAG 1 cut(s) 1249
Eco72I CACGTG 1 cut(s) 1222
Eco88I CYCGRG 1 cut(s) 1343
EcoICRI GAGCTC 3 cut(s) 319, 739, 796
EcoO109I RGGNCCY 2 cut(s) 59, 1176
EcoRI GAATTC 1 cut(s) 486
EcoRII CCWGG 3 cut(s) 19, 189, 1520
EcoT14I CCWWGG 1 cut(s) 1527
EcoT38I GRGCYC 5 cut(s) 321, 741, 798, 1481, 1623
ErhI CCWWGG 1 cut(s) 1527
FaeI CATG 7 cut(s) 608, 1003, 1192, 1213, 1330, 1450, 1531
FalI AAGNNNNNCTT 2 cut(s) 1164, 1196
FaqI GGGAC 4 cut(s) 72, 1162, 1475, 1590
FatI CATG 7 cut(s) 604, 999, 1188, 1209, 1326, 1446, 1527
FauI CCCGC 1 cut(s) 70
FauNDI CATATG 1 cut(s) 681
FbaI TGATCA 2 cut(s) 946, 1002
FblI GTMKAC 1 cut(s) 1278
FokI GGATG 2 cut(s) 1360, 1418
FriOI GRGCYC 5 cut(s) 321, 741, 798, 1481, 1623
GlaI GCGC 4 cut(s) 493, 567, 1112, 1567
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 2 cut(s) 260, 1422
HaeIII GGCC 3 cut(s) 19, 365, 1150
HapII CCGG 8 cut(s) 50, 80, 86, 269, 530, 974, 1344, 1623
HgaI GACGC 4 cut(s) 113, 128, 182, 358
HhaI GCGC 4 cut(s) 494, 568, 1113, 1568
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 7 cut(s) 608, 1003, 1192, 1213, 1330, 1450, 1531
Hin6I GCGC 4 cut(s) 492, 566, 1111, 1566
HinP1I GCGC 4 cut(s) 492, 566, 1111, 1566
HinfI GANTC 7 cut(s) 665, 919, 1091, 1269, 1280, 1330, 1607
HpaII CCGG 8 cut(s) 50, 80, 86, 269, 530, 974, 1344, 1623
HphI GGTGA 4 cut(s) 100, 224, 697, 1261
Hpy166II GTNNAC 3 cut(s) 557, 583, 1279
Hpy188I TCNGA 7 cut(s) 103, 323, 1090, 1122, 1268, 1274, 1618
Hpy8I GTNNAC 3 cut(s) 557, 583, 1279
Hpy99I CGWCG 7 cut(s) 176, 332, 374, 386, 506, 627, 938
HpyCH4III ACNGT 3 cut(s) 94, 429, 1202
HpyCH4IV ACGT 4 cut(s) 327, 384, 622, 1221
HpyCH4V TGCA 6 cut(s) 283, 408, 551, 744, 999, 1604
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 161, 280, 1156
HpyF3I CTNAG 8 cut(s) 32, 195, 200, 655, 735, 799, 1121, 1617
HpySE526I ACGT 4 cut(s) 327, 384, 622, 1221
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 7 cut(s) 608, 1003, 1192, 1213, 1330, 1450, 1531
HspAI GCGC 4 cut(s) 492, 566, 1111, 1566
KflI GGGWCCC 2 cut(s) 59, 1176
Kpn2I TCCGGA 1 cut(s) 973
KroI GCCGGC 1 cut(s) 79
KroNI GCCGGC 1 cut(s) 81
Ksp22I TGATCA 2 cut(s) 946, 1002
Kzo9I GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
LguI GCTCTTC 1 cut(s) 933
LmnI GCTCC 8 cut(s) 41, 88, 279, 316, 324, 1376, 1387, 1441
Lsp1109I GCAGC 3 cut(s) 580, 976, 1391
LweI GCATC 7 cut(s) 60, 66, 270, 538, 1146, 1356, 1401
MaeII ACGT 4 cut(s) 327, 384, 622, 1221
MaeIII GTNAC 4 cut(s) 88, 212, 458, 1212
MalI GATC 9 cut(s) 167, 257, 266, 635, 768, 887, 948, 1004, 1534
MboI GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
MboII GAAGA 5 cut(s) 349, 452, 920, 1070, 1255
MfeI CAATTG 1 cut(s) 259
MflI RGATCY 1 cut(s) 264
MhlI GDGCHC 8 cut(s) 189, 276, 321, 741, 798, 1438, 1481, 1623
MlyI GAGTC 5 cut(s) 674, 1274, 1278, 1324, 1616
MmeI TCCRAC 2 cut(s) 1308, 1334
MroI TCCGGA 1 cut(s) 973
MroNI GCCGGC 1 cut(s) 79
MseI TTAA 3 cut(s) 423, 786, 834
MspA1I CMGCKG 2 cut(s) 204, 1153
MspI CCGG 8 cut(s) 50, 80, 86, 269, 530, 974, 1344, 1623
MspR9I CCNGG 8 cut(s) 21, 50, 191, 269, 1344, 1345, 1522, 1623
MunI CAATTG 1 cut(s) 259
MvaI CCWGG 3 cut(s) 21, 191, 1522
MvnI CGCG 6 cut(s) 107, 164, 236, 492, 776, 1566
MwoI GCNNNNNNNGC 4 cut(s) 119, 161, 280, 1156
NaeI GCCGGC 1 cut(s) 81
NciI CCSGG 5 cut(s) 50, 269, 1344, 1345, 1623
NcoI CCATGG 1 cut(s) 1527
NdeI CATATG 1 cut(s) 681
NdeII GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
NgoMIV GCCGGC 1 cut(s) 79
NlaIII CATG 7 cut(s) 608, 1003, 1192, 1213, 1330, 1450, 1531
NmuCI GTSAC 4 cut(s) 88, 212, 458, 1212
NspI RCATGY 1 cut(s) 1213
PagI TCATGA 2 cut(s) 604, 1188
PceI AGGCCT 1 cut(s) 365
PciI ACATGT 1 cut(s) 1209
PciSI GCTCTTC 1 cut(s) 933
PcsI WCGNNNNNNNCGW 3 cut(s) 168, 378, 510
PdiI GCCGGC 1 cut(s) 81
PfeI GAWTC 2 cut(s) 919, 1091
PleI GAGTC 5 cut(s) 673, 1274, 1277, 1324, 1615
PmaCI CACGTG 1 cut(s) 1222
PmlI CACGTG 1 cut(s) 1222
PpsI GAGTC 5 cut(s) 673, 1274, 1277, 1324, 1615
Ppu21I YACGTR 1 cut(s) 1222
PpuMI RGGWCCY 2 cut(s) 59, 1176
PscI ACATGT 1 cut(s) 1209
PshBI ATTAAT 1 cut(s) 786
Psp124BI GAGCTC 3 cut(s) 321, 741, 798
Psp5II RGGWCCY 2 cut(s) 59, 1176
Psp6I CCWGG 3 cut(s) 19, 189, 1520
PspCI CACGTG 1 cut(s) 1222
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 3 cut(s) 19, 189, 1520
PspPI GGNCC 7 cut(s) 17, 59, 355, 1060, 1148, 1176, 1524
PspPPI RGGWCCY 2 cut(s) 59, 1176
PsrI GAACNNNNNNTAC 2 cut(s) 1443, 1475
PstI CTGCAG 1 cut(s) 1606
PsuI RGATCY 1 cut(s) 264
RsaI GTAC 5 cut(s) 137, 221, 628, 957, 1504
RsaNI GTAC 5 cut(s) 136, 220, 627, 956, 1503
SacI GAGCTC 3 cut(s) 321, 741, 798
SapI GCTCTTC 1 cut(s) 933
SaqAI TTAA 3 cut(s) 423, 786, 834
Sau3AI GATC 9 cut(s) 165, 255, 264, 633, 766, 885, 946, 1002, 1532
Sau96I GGNCC 7 cut(s) 17, 59, 355, 1060, 1148, 1176, 1524
SchI GAGTC 5 cut(s) 674, 1274, 1278, 1324, 1616
ScrFI CCNGG 8 cut(s) 21, 50, 191, 269, 1344, 1345, 1522, 1623
SduI GDGCHC 8 cut(s) 189, 276, 321, 741, 798, 1438, 1481, 1623
SfaNI GCATC 7 cut(s) 60, 66, 270, 538, 1146, 1356, 1401
SfcI CTRYAG 1 cut(s) 1602
SinI GGWCC 5 cut(s) 59, 355, 1060, 1176, 1524
SmaI CCCGGG 1 cut(s) 1345
SseBI AGGCCT 1 cut(s) 365
SspI AATATT 1 cut(s) 1028
SstI GAGCTC 3 cut(s) 321, 741, 798
StuI AGGCCT 1 cut(s) 365
StyD4I CCNGG 8 cut(s) 19, 48, 189, 267, 1342, 1343, 1520, 1621
StyI CCWWGG 1 cut(s) 1527
TaaI ACNGT 3 cut(s) 94, 429, 1202
TaiI ACGT 4 cut(s) 330, 387, 625, 1224
TaqI TCGA 6 cut(s) 5, 171, 335, 372, 389, 933
TaqII GACCGA 2 cut(s) 658, 1003
TatI WGTACW 1 cut(s) 955
TauI GCSGC 8 cut(s) 47, 155, 158, 239, 497, 500, 779, 1153
TfiI GAWTC 2 cut(s) 919, 1091
Tru1I TTAA 3 cut(s) 423, 786, 834
Tru9I TTAA 3 cut(s) 423, 786, 834
TscAI CASTG 4 cut(s) 739, 1170, 1207, 1636
TseFI GTSAC 4 cut(s) 88, 212, 458, 1212
TseI GCWGC 3 cut(s) 568, 964, 1379
Tsp45I GTSAC 4 cut(s) 88, 212, 458, 1212
TspDTI ATGAA 1 cut(s) 802
TspGWI ACGGA 1 cut(s) 217
TspMI CCCGGG 1 cut(s) 1343
TspRI CASTG 4 cut(s) 739, 1170, 1207, 1636
VpaK11BI GGWCC 5 cut(s) 59, 355, 1060, 1176, 1524
VspI ATTAAT 1 cut(s) 786
XapI RAATTY 2 cut(s) 146, 486
XceI RCATGY 1 cut(s) 1213
XmaI CCCGGG 1 cut(s) 1343
XmiI GTMKAC 1 cut(s) 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.