RchiOBHm_Chr6g0291901

oxidoreductase, 2OG-Fe(II) oxygenase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0010863
Physical Location & Seq
Forward (+)
54964581 .. 54969484
4904 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26192

Sequence Viewer

Length: 1617 bp
ATGGCGATGGCTGTTGGGCCAGCTGCGTTGCCGCCGGCCGATGGAGGCAGTCCTCCAGCGATGGGACCCACAATGATGCCGATGACGGTGGTGCCGGACGCGGTGGCGAAGGATGCAATAATTGGGTGGTACCGCGGCGAGTTTGCGGCGGCCAACGCGATCATCGACGCACTCTGCGGGCACCTCACACAGCTCAGCGGCGGAGGGGCCGACTACGGCGCCGTGTTCGCCGCGATACACCGGAGGCGGATGAATTGGATCCCTGTGCTCCAGATGCAGAAGTACCACTCCATCGCTGACGTGACGGTGGAGCTCCGAAACCTCGGGGCGAAGATGGCTGAGCGGGAGAGCCACCACCAAAACGGGGACGTTTTTGAGGCCGAGGACAATTGCAAGAGCAGCGAGGGGGCTAAGTCGTGTGTGGAGGACGAGAAGGTGGAAGAAACTAATGGAAATGAGCCAGCCGCAGATGAGGTCACTGAAGAAGACGGTTCGCCGGAGAGTGATATTACCGACTCAGGATCTCAAGAAGTGCTCAATTCAGTGAACACTGAGATATGTTCTAACCATGATGACTGTGAGGCACGTCGTGCCCAGATCAAGTTGACAAAAGGTTTCTCAGCAAAGGAATCAGTCAAAGGGCATATGGTTAATGTTGTGAAAGGCTTAAAGCTATATGAGGAAATATTTACTGACTCTGAGCTCTCTAAATTGACTGACTTTGCAAACGAACTCCGCACGGCTGGTCTGAATGGAGAGCTCTCAGGTGAGACCTTTATTTTGTTCAACAAGCAGATTAAGGGAAACAGGAGAGAGCTGATTCAGTTTGGAATTCCAATATTTGGACAGGTCAAAGATGAATCTGCAAGCAACATAGGGCCAATTCCAGCTCTTCTCCATGATGTGATTGATCACCTTGTACTGTGGCAACTAATTCCAGAGTATAAAAGACCTAATGGTTGCATTATCAACTTCTTTGAGGAGGGAGAATATTCGCAGCCATTCCTGAAACCACCACATTTGGATCAGCCCATCTCCACTCTTCTCCTCTCTGAATCCACAATGGCTTTCGGGCGCACCCTTGTGACTGATACTGAAGGGAACTACAAGGGGCCGCTGACCCTCTCCTTGAAGGAAGGGTCTCTCCTAGTTATGAGGGGAAACAGTGCTGACATGGCAAGGCACGTCATGTGTCCATCTCCGAACAAGAGGATCAGCATCACATTCTTTAGAGTCCGAGTAGACTCCAACCAATTTCAGTCATCACCACCAAGTCCAACACCGAATGGTGCCATGACTGTATGGCAACATGGCGTTATGAGCCCATATGCAGCTCCAGATGGAGCACCCAATGGCTATGAGGCAATGGATGTAATGCCAAAATGGGGTGTCCTCCGTGCTCCGGTGGTCATGTTAGCCCCAGTTCGTCCTATGGTAGTGAGCCCTCGAAAAGTTCCTCAAAGTGGTACTGGAGTTTTCTTGCCATGGACTGTGGGATCAAGAAAACCAGCAAAACATCTTCCACCTCGCGCCCAAAAAGGACGGCTTATGGCTCTCCCTTCCCCGGCCGAGACACATGTAGTGGAGTCCACTTCTGAGCCAGGCATCACCGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy

Protein Analysis

538

Amino Acids

58.38

Weight (kDa)

5.47

Isoelectric Point (pI)

47.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy PF03171 321 - 411 1.6e-06 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010863)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02940
fragaria_vesca FvH4_2g24110 FvH4_2g24110 FvH4_2g24110
malus_domestica MD03G1271100.v1.1 MD11G1291700.v1.1
prunus_persica Prupe.8G247100_v2.0.a1
pyrus_communis pycom03g21580 pycom11g25840
rosa_chinensis RchiOBHm_Chr6g0291901
rosa_laevigata RLG00000012080
rosa_multiflora Rmu_sc0002484.1_g000006 Rmu_sc0002484.1_g000007
rosa_roxburghii Rroxscaffold_7G00175640
rosa_rugosa Rorug06G0221700
rosa_samantha Rh6AG335200 Rh6BG342600 Rh6CG348800 Rh6DG335400
rosa_wichuraiana Rw6G029170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 129
AccB1I GGYRCC 5 cut(s) 91, 129, 180, 218, 1289
AccB7I CCANNNNNTGG 1 cut(s) 842
AccBSI CCGCTC 1 cut(s) 343
AccI GTMKAC 1 cut(s) 1242
AccII CGCG 5 cut(s) 101, 135, 158, 233, 1530
AclWI GGATC 6 cut(s) 253, 266, 529, 1032, 1220, 1504
AcoI YGGCCR 3 cut(s) 36, 150, 1566
AcsI RAATTY 1 cut(s) 831
AcuI CTGAAG 2 cut(s) 501, 1116
AcyI GRCGYC 1 cut(s) 219
AdeI CACNNNGTG 1 cut(s) 590
AfaI GTAC 4 cut(s) 131, 284, 921, 1468
AfiI CCNNNNNNNGG 8 cut(s) 41, 62, 364, 842, 1385, 1402, 1463, 1564
AflIII ACRYGT 1 cut(s) 1576
AgsI TTSAA 2 cut(s) 787, 1132
AjiI CACGTC 3 cut(s) 301, 587, 1186
AjnI CCWGG 1 cut(s) 1600
AleI CACNNNNGTG 1 cut(s) 1082
AluBI AGCT 9 cut(s) 23, 193, 313, 673, 703, 760, 817, 890, 1334
AluI AGCT 9 cut(s) 23, 193, 313, 673, 703, 760, 817, 890, 1334
Alw21I GWGCWC 7 cut(s) 270, 315, 537, 705, 762, 1348, 1402
Alw26I GTCTC 3 cut(s) 764, 1146, 1565
AlwI GGATC 6 cut(s) 253, 266, 529, 1032, 1220, 1504
Ama87I CYCGRG 1 cut(s) 323
AoxI GGCC 8 cut(s) 17, 36, 150, 207, 378, 878, 1112, 1566
ApeKI GCWGC 4 cut(s) 23, 399, 997, 1331
ApoI RAATTY 1 cut(s) 831
ArsI GACNNNNNNTTYG 2 cut(s) 763, 795
Asp718I GGTACC 1 cut(s) 129
AspLEI GCGC 3 cut(s) 221, 1077, 1532
AspS9I GGNCC 5 cut(s) 17, 65, 207, 878, 1112
AsuC2I CCSGG 1 cut(s) 1565
AsuHPI GGTGA 4 cut(s) 779, 905, 1257, 1600
AvaI CYCGRG 1 cut(s) 323
AvaII GGWCC 1 cut(s) 65
BaeGI GKGCMC 2 cut(s) 183, 595
BaeI ACNNNNGTAYC 2 cut(s) 1458, 1491
BamHI GGATCC 1 cut(s) 258
BanI GGYRCC 5 cut(s) 91, 129, 180, 218, 1289
BanII GRGCYC 5 cut(s) 315, 705, 762, 1325, 1445
BbsI GAAGAC 1 cut(s) 492
Bbv12I GWGCWC 7 cut(s) 270, 315, 537, 705, 762, 1348, 1402
BbvI GCAGC 4 cut(s) 10, 411, 1009, 1343
BccI CCATC 7 cut(s) 35, 55, 299, 328, 1040, 1204, 1334
BceAI ACGGC 4 cut(s) 206, 232, 756, 1559
BciT130I CCWGG 1 cut(s) 1602
BclI TGATCA 1 cut(s) 910
BcnI CCSGG 1 cut(s) 1565
BcoDI GTCTC 3 cut(s) 764, 1146, 1565
BfaI CTAG 1 cut(s) 1148
BfoI RGCGCY 1 cut(s) 222
BlpI GCTNAGC 2 cut(s) 194, 339
Bme1390I CCNGG 2 cut(s) 1565, 1602
Bme18I GGWCC 1 cut(s) 65
BmeT110I CYCGRG 1 cut(s) 323
BmgBI CACGTC 3 cut(s) 301, 587, 1186
BmgT120I GGNCC 5 cut(s) 17, 65, 207, 878, 1112
BmrFI CCNGG 2 cut(s) 1565, 1602
BmrI ACTGGG 1 cut(s) 1415
BmsI GCATC 4 cut(s) 66, 103, 264, 1227
BmuI ACTGGG 1 cut(s) 1415
BpiI GAAGAC 1 cut(s) 492
BpmI CTGGAG 4 cut(s) 39, 254, 1320, 1491
Bpu1102I GCTNAGC 2 cut(s) 194, 339
BpuEI CTTGAG 1 cut(s) 510
BpuMI CCSGG 1 cut(s) 1565
BsaBI GATNNNNATC 1 cut(s) 1217
BsaHI GRCGYC 1 cut(s) 219
BsaI GGTCTC 2 cut(s) 764, 1146
BsaJI CCNNGG 5 cut(s) 133, 322, 381, 1484, 1563
BsaWI WCCGGW 2 cut(s) 240, 1402
Bsc4I CCNNNNNNNGG 8 cut(s) 41, 62, 364, 842, 1385, 1402, 1463, 1564
Bse118I RCCGGY 1 cut(s) 34
Bse1I ACTGG 2 cut(s) 1421, 1474
Bse3DI GCAATG 1 cut(s) 1371
Bse8I GATNNNNATC 1 cut(s) 1217
BseBI CCWGG 1 cut(s) 1602
BseDI CCNNGG 5 cut(s) 133, 322, 381, 1484, 1563
BseGI GGATG 3 cut(s) 118, 255, 1375
BseJI GATNNNNATC 1 cut(s) 1217
BseLI CCNNNNNNNGG 8 cut(s) 41, 62, 364, 842, 1385, 1402, 1463, 1564
BseMI GCAATG 1 cut(s) 1371
BseMII CTCAG 8 cut(s) 208, 330, 531, 543, 633, 690, 777, 1587
BseNI ACTGG 2 cut(s) 1421, 1474
BseRI GAGGAG 2 cut(s) 995, 1037
BseSI GKGCMC 2 cut(s) 183, 595
BseX3I CGGCCG 2 cut(s) 36, 1566
BseXI GCAGC 4 cut(s) 10, 411, 1009, 1343
Bsh1236I CGCG 5 cut(s) 101, 135, 158, 233, 1530
Bsh1285I CGRYCG 2 cut(s) 39, 1569
BshFI GGCC 8 cut(s) 19, 38, 152, 209, 380, 880, 1114, 1568
BshNI GGYRCC 5 cut(s) 91, 129, 180, 218, 1289
BsiEI CGRYCG 2 cut(s) 39, 1569
BsiHKAI GWGCWC 7 cut(s) 270, 315, 537, 705, 762, 1348, 1402
BsiHKCI CYCGRG 1 cut(s) 323
BsiSI CCGG 6 cut(s) 35, 95, 241, 497, 1403, 1565
BslFI GGGAC 2 cut(s) 78, 380
BslI CCNNNNNNNGG 8 cut(s) 41, 62, 364, 842, 1385, 1402, 1463, 1564
BsmAI GTCTC 3 cut(s) 764, 1146, 1565
BsmFI GGGAC 2 cut(s) 78, 380
BsnI GGCC 8 cut(s) 19, 38, 152, 209, 380, 880, 1114, 1568
Bso31I GGTCTC 2 cut(s) 764, 1146
BsoBI CYCGRG 1 cut(s) 323
Bsp143I GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
Bsp1720I GCTNAGC 2 cut(s) 194, 339
Bsp19I CCATGG 1 cut(s) 1484
BspANI GGCC 8 cut(s) 19, 38, 152, 209, 380, 880, 1114, 1568
BspCNI CTCAG 8 cut(s) 207, 331, 530, 544, 632, 691, 776, 1588
BspFNI CGCG 5 cut(s) 101, 135, 158, 233, 1530
BspPI GGATC 6 cut(s) 253, 266, 529, 1032, 1220, 1504
BspQI GCTCTTC 1 cut(s) 897
BspT107I GGYRCC 5 cut(s) 91, 129, 180, 218, 1289
BspTNI GGTCTC 2 cut(s) 764, 1146
BsrBI CCGCTC 1 cut(s) 343
BsrDI GCAATG 1 cut(s) 1371
BsrFI RCCGGY 1 cut(s) 34
BsrI ACTGG 2 cut(s) 1421, 1474
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 5 cut(s) 133, 322, 381, 1484, 1563
BssMI GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
BssNI GRCGYC 1 cut(s) 219
BssT1I CCWWGG 1 cut(s) 1484
Bst2UI CCWGG 1 cut(s) 1602
Bst4CI ACNGT 9 cut(s) 88, 307, 491, 578, 924, 1166, 1300, 1492, 1612
Bst6I CTCTTC 2 cut(s) 897, 1047
BstACI GRCGYC 1 cut(s) 219
BstAPI GCANNNNNTGC 1 cut(s) 590
BstC8I GCNNGC 5 cut(s) 21, 36, 179, 462, 868
BstDEI CTNAG 9 cut(s) 194, 339, 411, 517, 552, 619, 699, 763, 1596
BstDSI CCRYGG 2 cut(s) 133, 1484
BstF5I GGATG 3 cut(s) 118, 255, 1375
BstFNI CGCG 5 cut(s) 101, 135, 158, 233, 1530
BstH2I RGCGCY 1 cut(s) 222
BstHHI GCGC 3 cut(s) 221, 1077, 1532
BstKTI GATC 8 cut(s) 162, 261, 524, 600, 913, 1027, 1215, 1499
BstMAI GTCTC 3 cut(s) 764, 1146, 1565
BstMBI GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
BstMCI CGRYCG 2 cut(s) 39, 1569
BstMWI GCNNNNNNNGC 9 cut(s) 113, 155, 227, 274, 335, 399, 590, 1175, 1320
BstNI CCWGG 1 cut(s) 1602
BstNSI RCATGY 1 cut(s) 1580
BstSCI CCNGG 2 cut(s) 1563, 1600
BstSLI GKGCMC 2 cut(s) 183, 595
BstUI CGCG 5 cut(s) 101, 135, 158, 233, 1530
BstV1I GCAGC 4 cut(s) 10, 411, 1009, 1343
BstV2I GAAGAC 1 cut(s) 492
BstX2I RGATCY 2 cut(s) 258, 521
BstYI RGATCY 2 cut(s) 258, 521
BstZI CGGCCG 2 cut(s) 36, 1566
BsuRI GGCC 8 cut(s) 19, 38, 152, 209, 380, 880, 1114, 1568
BtgI CCRYGG 2 cut(s) 133, 1484
BtgZI GCGATG 3 cut(s) 20, 74, 277
BtrI CACGTC 3 cut(s) 301, 587, 1186
BtsCI GGATG 3 cut(s) 118, 255, 1375
BtsIMutI CAGTG 4 cut(s) 477, 549, 549, 1171
Cac8I GCNNGC 5 cut(s) 21, 36, 179, 462, 868
CfoI GCGC 3 cut(s) 221, 1077, 1532
Cfr10I RCCGGY 1 cut(s) 34
Cfr13I GGNCC 5 cut(s) 17, 65, 207, 878, 1112
Cfr42I CCGCGG 1 cut(s) 136
CseI GACGC 2 cut(s) 107, 176
Csp6I GTAC 4 cut(s) 130, 283, 920, 1467
CspCI CAANNNNNGTGG 2 cut(s) 1002, 1037
CviAII CATG 9 cut(s) 569, 899, 1174, 1189, 1294, 1310, 1411, 1485, 1577
CviQI GTAC 4 cut(s) 130, 283, 920, 1467
DdeI CTNAG 9 cut(s) 194, 339, 411, 517, 552, 619, 699, 763, 1596
DinI GGCGCC 1 cut(s) 220
DpnI GATC 8 cut(s) 161, 260, 523, 599, 912, 1026, 1214, 1498
DpnII GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
DraIII CACNNNGTG 1 cut(s) 590
EaeI YGGCCR 3 cut(s) 36, 150, 1566
EagI CGGCCG 2 cut(s) 36, 1566
Eam1104I CTCTTC 2 cut(s) 897, 1047
EarI CTCTTC 2 cut(s) 897, 1047
EciI GGCGGA 2 cut(s) 216, 262
Ecl136II GAGCTC 3 cut(s) 313, 703, 760
EclXI CGGCCG 2 cut(s) 36, 1566
Eco130I CCWWGG 1 cut(s) 1484
Eco24I GRGCYC 5 cut(s) 315, 705, 762, 1325, 1445
Eco31I GGTCTC 2 cut(s) 764, 1146
Eco47I GGWCC 1 cut(s) 65
Eco52I CGGCCG 2 cut(s) 36, 1566
Eco53kI GAGCTC 3 cut(s) 313, 703, 760
Eco57I CTGAAG 2 cut(s) 501, 1116
Eco88I CYCGRG 1 cut(s) 323
EcoICRI GAGCTC 3 cut(s) 313, 703, 760
EcoO109I RGGNCCY 1 cut(s) 65
EcoRI GAATTC 1 cut(s) 831
EcoRII CCWGG 1 cut(s) 1600
EcoT14I CCWWGG 1 cut(s) 1484
EcoT38I GRGCYC 5 cut(s) 315, 705, 762, 1325, 1445
EgeI GGCGCC 1 cut(s) 220
EheI GGCGCC 1 cut(s) 220
ErhI CCWWGG 1 cut(s) 1484
FaeI CATG 9 cut(s) 572, 902, 1177, 1192, 1297, 1313, 1414, 1488, 1580
FalI AAGNNNNNCTT 2 cut(s) 1530, 1562
FaqI GGGAC 2 cut(s) 78, 380
FatI CATG 9 cut(s) 568, 898, 1173, 1188, 1293, 1309, 1410, 1484, 1576
FauI CCCGC 2 cut(s) 170, 336
FauNDI CATATG 2 cut(s) 645, 1327
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 1 cut(s) 1242
FokI GGATG 3 cut(s) 125, 262, 1382
FriOI GRGCYC 5 cut(s) 315, 705, 762, 1325, 1445
FspBI CTAG 1 cut(s) 1148
GlaI GCGC 3 cut(s) 220, 1076, 1531
GsuI CTGGAG 4 cut(s) 39, 254, 1320, 1491
HaeII RGCGCY 1 cut(s) 222
HaeIII GGCC 8 cut(s) 19, 38, 152, 209, 380, 880, 1114, 1568
HapII CCGG 6 cut(s) 35, 95, 241, 497, 1403, 1565
HgaI GACGC 2 cut(s) 107, 176
HhaI GCGC 3 cut(s) 221, 1077, 1532
Hin1I GRCGYC 1 cut(s) 219
Hin1II CATG 9 cut(s) 572, 902, 1177, 1192, 1297, 1313, 1414, 1488, 1580
Hin6I GCGC 3 cut(s) 219, 1075, 1530
HinP1I GCGC 3 cut(s) 219, 1075, 1530
HincII GTYRAC 1 cut(s) 606
HindII GTYRAC 1 cut(s) 606
HinfI GANTC 9 cut(s) 515, 629, 695, 820, 860, 1055, 1233, 1244, 1586
HpaII CCGG 6 cut(s) 35, 95, 241, 497, 1403, 1565
HphI GGTGA 4 cut(s) 779, 905, 1257, 1600
Hpy166II GTNNAC 4 cut(s) 547, 606, 1243, 1590
Hpy188I TCNGA 7 cut(s) 317, 700, 750, 1054, 1203, 1238, 1597
Hpy188III TCNNGA 7 cut(s) 271, 519, 527, 938, 1006, 1337, 1500
Hpy8I GTNNAC 4 cut(s) 547, 606, 1243, 1590
Hpy99I CGWCG 2 cut(s) 170, 591
HpyAV CCTTC 6 cut(s) 103, 427, 1091, 1126, 1130, 1569
HpyCH4III ACNGT 9 cut(s) 88, 307, 491, 578, 924, 1166, 1300, 1492, 1612
HpyCH4IV ACGT 4 cut(s) 300, 369, 586, 1185
HpyCH4V TGCA 7 cut(s) 116, 277, 393, 725, 866, 963, 1331
HpyF10VI GCNNNNNNNGC 9 cut(s) 113, 155, 227, 274, 335, 399, 590, 1175, 1320
HpyF3I CTNAG 9 cut(s) 194, 339, 411, 517, 552, 619, 699, 763, 1596
HpySE526I ACGT 4 cut(s) 300, 369, 586, 1185
Hsp92I GRCGYC 1 cut(s) 219
Hsp92II CATG 9 cut(s) 572, 902, 1177, 1192, 1297, 1313, 1414, 1488, 1580
HspAI GCGC 3 cut(s) 219, 1075, 1530
KasI GGCGCC 1 cut(s) 218
KflI GGGWCCC 1 cut(s) 65
KpnI GGTACC 1 cut(s) 133
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Ksp22I TGATCA 1 cut(s) 910
KspI CCGCGG 1 cut(s) 136
Kzo9I GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 6 cut(s) 273, 310, 318, 1339, 1343, 1405
Lsp1109I GCAGC 4 cut(s) 10, 411, 1009, 1343
LweI GCATC 4 cut(s) 66, 103, 264, 1227
MaeI CTAG 1 cut(s) 1148
MaeII ACGT 4 cut(s) 300, 369, 586, 1185
MaeIII GTNAC 3 cut(s) 301, 475, 1084
MalI GATC 8 cut(s) 161, 260, 523, 599, 912, 1026, 1214, 1498
MbiI CCGCTC 1 cut(s) 343
MboI GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
MboII GAAGA 7 cut(s) 343, 452, 494, 497, 884, 1034, 1511
MfeI CAATTG 1 cut(s) 388
MflI RGATCY 2 cut(s) 258, 521
MluCI AATT 9 cut(s) 120, 253, 388, 538, 710, 831, 882, 933, 1253
Mly113I GGCGCC 1 cut(s) 219
MlyI GAGTC 5 cut(s) 509, 689, 1238, 1242, 1595
MmeI TCCRAC 2 cut(s) 1272, 1301
MroNI GCCGGC 1 cut(s) 34
MseI TTAA 4 cut(s) 651, 668, 798, 1615
MslI CAYNNNNRTG 2 cut(s) 74, 1082
MspA1I CMGCKG 4 cut(s) 23, 135, 198, 1117
MspI CCGG 6 cut(s) 35, 95, 241, 497, 1403, 1565
MspR9I CCNGG 2 cut(s) 1565, 1602
MunI CAATTG 1 cut(s) 388
MvaI CCWGG 1 cut(s) 1602
MvnI CGCG 5 cut(s) 101, 135, 158, 233, 1530
MwoI GCNNNNNNNGC 9 cut(s) 113, 155, 227, 274, 335, 399, 590, 1175, 1320
NaeI GCCGGC 1 cut(s) 36
NarI GGCGCC 1 cut(s) 219
NciI CCSGG 1 cut(s) 1565
NcoI CCATGG 1 cut(s) 1484
NdeI CATATG 2 cut(s) 645, 1327
NdeII GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
NgoMIV GCCGGC 1 cut(s) 34
NlaIII CATG 9 cut(s) 572, 902, 1177, 1192, 1297, 1313, 1414, 1488, 1580
NmeAIII GCCGAG 2 cut(s) 406, 1594
NmuCI GTSAC 3 cut(s) 301, 475, 1084
NspI RCATGY 1 cut(s) 1580
OliI CACNNNNGTG 1 cut(s) 1082
PciI ACATGT 1 cut(s) 1576
PciSI GCTCTTC 1 cut(s) 897
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PdiI GCCGGC 1 cut(s) 36
PfeI GAWTC 4 cut(s) 629, 820, 860, 1055
PflMI CCANNNNNTGG 1 cut(s) 842
PleI GAGTC 5 cut(s) 509, 689, 1238, 1241, 1594
PluTI GGCGCC 1 cut(s) 222
PpsI GAGTC 5 cut(s) 509, 689, 1238, 1241, 1594
PpuMI RGGWCCY 1 cut(s) 65
PscI ACATGT 1 cut(s) 1576
Psp124BI GAGCTC 3 cut(s) 315, 705, 762
Psp5II RGGWCCY 1 cut(s) 65
Psp6I CCWGG 1 cut(s) 1600
PspGI CCWGG 1 cut(s) 1600
PspPI GGNCC 5 cut(s) 17, 65, 207, 878, 1112
PspPPI RGGWCCY 1 cut(s) 65
PsuI RGATCY 2 cut(s) 258, 521
PvuII CAGCTG 1 cut(s) 23
RsaI GTAC 4 cut(s) 131, 284, 921, 1468
RsaNI GTAC 4 cut(s) 130, 283, 920, 1467
RseI CAYNNNNRTG 2 cut(s) 74, 1082
SacI GAGCTC 3 cut(s) 315, 705, 762
SacII CCGCGG 1 cut(s) 136
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 4 cut(s) 651, 668, 798, 1615
Sau3AI GATC 8 cut(s) 159, 258, 521, 597, 910, 1024, 1212, 1496
Sau96I GGNCC 5 cut(s) 17, 65, 207, 878, 1112
SchI GAGTC 5 cut(s) 509, 689, 1238, 1242, 1595
ScrFI CCNGG 2 cut(s) 1565, 1602
SfaNI GCATC 4 cut(s) 66, 103, 264, 1227
SfoI GGCGCC 1 cut(s) 220
Sfr303I CCGCGG 1 cut(s) 136
SgrBI CCGCGG 1 cut(s) 136
SinI GGWCC 1 cut(s) 65
SmiMI CAYNNNNRTG 2 cut(s) 74, 1082
SmlI CTYRAG 1 cut(s) 525
SmoI CTYRAG 1 cut(s) 525
Sse9I AATT 9 cut(s) 120, 253, 388, 538, 710, 831, 882, 933, 1253
SspDI GGCGCC 1 cut(s) 218
SspI AATATT 3 cut(s) 687, 840, 992
SspMI CTAG 1 cut(s) 1148
SstI GAGCTC 3 cut(s) 315, 705, 762
StyD4I CCNGG 2 cut(s) 1563, 1600
StyI CCWWGG 1 cut(s) 1484
TaaI ACNGT 9 cut(s) 88, 307, 491, 578, 924, 1166, 1300, 1492, 1612
TaiI ACGT 4 cut(s) 303, 372, 589, 1188
TaqI TCGA 2 cut(s) 165, 1447
TasI AATT 9 cut(s) 120, 253, 388, 538, 710, 831, 882, 933, 1253
TatI WGTACW 1 cut(s) 919
TauI GCSGC 8 cut(s) 34, 138, 149, 152, 201, 233, 467, 1117
TfiI GAWTC 4 cut(s) 629, 820, 860, 1055
Tru1I TTAA 4 cut(s) 651, 668, 798, 1615
Tru9I TTAA 4 cut(s) 651, 668, 798, 1615
TscAI CASTG 4 cut(s) 484, 549, 556, 1171
TseFI GTSAC 3 cut(s) 301, 475, 1084
TseI GCWGC 4 cut(s) 23, 399, 997, 1331
Tsp45I GTSAC 3 cut(s) 301, 475, 1084
TspDTI ATGAA 2 cut(s) 266, 873
TspGWI ACGGA 1 cut(s) 1385
TspRI CASTG 4 cut(s) 484, 549, 556, 1171
Van91I CCANNNNNTGG 1 cut(s) 842
VpaK11BI GGWCC 1 cut(s) 65
XapI RAATTY 1 cut(s) 831
XceI RCATGY 1 cut(s) 1580
XmiI GTMKAC 1 cut(s) 1242
XspI CTAG 1 cut(s) 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.