pycom12g11260

Transcription initiation factor TFIID subunit 8-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0011784
Physical Location & Seq
Forward (+)
13481403 .. 13483402
2000 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1671 bp
ATGCCAATTTTTCATAAATTCCCTCCATATTCCGAACCTTCTTCCCTCTCGCAAACCCTAACCCTACCCAATTTCCCTTCCTTCCTCGAGGGTTTGCGATGTTTCTCAAAATCTGAATTCGAACTCTGCAATTTGGCCTCTGATTCGTGTTCCGGAGTCTTCAATTCGCTGCAAGACTCCGAGAAATTTCTAGGGTTTCTGAGTGTCCAGCTCGATTTTTCTTTCCCCCTTTATATGTTTCTGTTTGACTGCCGAGAAAACGAGGGAAAGGGAGGGGAAATTTGTGGTTTTTGCCGGAATGAGGGTTTGAATATGAGCCATGGAGATGTGGACAGTAGCAGCAGAGTGAATCAACCCAGTAGTAATGTACCGAGGAGAGCAGGAGGAGGAGGAGCCGATGAGTTTGGCCGGGCAGTGTCGATAGTTGCGGTGGCGCAGATATGCGAGAGCGTTGGGTTTCAGAGCTTCAAAGAGTCTGCGATGGACGCCATGGCAGATATTGCCATCCGATACCTCCGTGACTTAGGGAAGATGTCGAGTTTTTACGCCAATTTGGCGGGCAGAACCGAGTCCAATGTGTTTGATATTATTAGGGCGCTGGAGGATTTGGAGTCGTCGCAAGGGTTTTTGGGTGCGGCGGAGGTGGGTCATTGTCTTGCAGAGTCCGGGATTGTAAGAGGCATTGTGGAGTATGTAGGTTCGGCTGAGGAGATCCCGTTTGCACAGCCGTTGCCTCGGTTTCCAGTGATCAAGCAACGAAAATTGATCCCGAATTTTGAGCAGATTGGGGATGCACCGCCAAGTAAGCATTTGCCCAATTGGTTGCCGGCTTTCCCTGATCCACACACTTACATTCAAACACCAATCGAGCAGGCTCGGCAGAGGAGGAAGGCTGAGAGGTCTCTGTTGAGTCTGCAGCAGAGGTTATTGTGCAATGGAGAGGCTTCTAGTTCAGGAGGAGCCCCTGCAGCAGTGGCATTGGCTGGTGGCAACGGCGGTAATGATGGAAAGGGATTGTTATTATTACAGGGGAATGAGACTGATCAAAGTAATCCATTCCTTGAACCCCCAATCCAGCCGGGGGAGAAAGATGCATCAGTATCCCAAGTGGTTTTGCCATCCCGGTTTTCGGATGAATTGGCAAAAGGGAACAACAATGATGGTTCTTCCCTTTTGGATGCGTTTGCGCCCGCCATTGAAGCAGTGAAAAGCGGAGCATGGATGGATGGAGACGACGAAAGGAGGCAGCTTCTTCCTGAAACCAGACCTGCAGTGAATTTCAAGTTGAGAAGCGGGAAGAAGTTTTTGGGGCAATCTTCGGATCTGAGCCTGCAAAAGAAGGGTTCCGGAAGACCGGCATATTGGTTCGGGCGAGAGGAGGAGAGGGATGACAAGAAGAGGAGAACAGAGTTTATTCTTAGACAGTCGATGGAAAACCCACAGGAACTCACTCAGTTTCTAGCTCTTAGTAGTCCCACTCTCACATATTTTTTTGTTAGAGGTAATGTAAATTTTTCTAGGTTGAAGTTGTTTTTTGGGGTTTTTTCACCACCATTTGATATTTGTATTGACACATTGAATTCTAATATTGATTTGATCGATGTAGATCGATCATGTGCTCCTCCATGGTCTTCAACTTTTATTTCCTTTTTGGGTAGTCATTTAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
Bromo_TP TAF8_C

Protein Analysis

557

Amino Acids

61.04

Weight (kDa)

5.25

Isoelectric Point (pI)

59.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromo_TP PF07524 134 - 203 1e-17 Bromodomain associated
TAF8_C PF10406 270 - 308 6.8e-08 Transcription factor TFIID complex subunit 8 C-term
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011784)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34340 AT4G34340
fragaria_vesca FvH4_6g16290
malus_domestica MD04G1094100.v1.1 MD12G1113700.v1.1
prunus_persica Prupe.6G232600_v2.0.a1
pyrus_communis pycom04g08910 pycom12g11260
rosa_chinensis RchiOBHm_Chr3g0470151
rosa_laevigata RLG00000024292
rosa_multiflora Rmu_co8416013.1_g000001 Rmu_sc0005600.1_g000015
rosa_roxburghii Rroxscaffold_6G00411140
rosa_rugosa Rorug03G0107400
rosa_samantha Rh3BG180500 Rh3CG171300 Rh3DG194400
rosa_wichuraiana Rw3G014740 Rw3G014830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 86
Acc36I ACCTGC 1 cut(s) 1276
AccIII TCCGGA 2 cut(s) 152, 1346
AciI CCGC 9 cut(s) 428, 557, 635, 638, 797, 996, 1191, 1212, 1293
AclWI GGATC 4 cut(s) 706, 760, 833, 1329
AcoI YGGCCR 1 cut(s) 406
AcsI RAATTY 8 cut(s) 17, 116, 185, 279, 772, 1276, 1510, 1579
AcyI GRCGYC 1 cut(s) 486
AfaI GTAC 1 cut(s) 369
AfiI CCNNNNNNNGG 3 cut(s) 301, 1081, 1129
AjuI GAANNNNNNNTTGG 2 cut(s) 1289, 1321
AloI GAACNNNNNNTCC 2 cut(s) 1056, 1088
AluBI AGCT 4 cut(s) 211, 465, 1249, 1463
AluI AGCT 4 cut(s) 211, 465, 1249, 1463
Alw21I GWGCWC 1 cut(s) 1621
Alw26I GTCTC 3 cut(s) 906, 1031, 1224
AlwI GGATC 4 cut(s) 706, 760, 833, 1329
Ama87I CYCGRG 1 cut(s) 86
Aor13HI TCCGGA 2 cut(s) 152, 1346
AoxI GGCC 2 cut(s) 135, 406
ApeKI GCWGC 5 cut(s) 169, 339, 916, 968, 1246
ApoI RAATTY 8 cut(s) 17, 116, 185, 279, 772, 1276, 1510, 1579
AspLEI GCGC 3 cut(s) 436, 598, 1189
AsuC2I CCSGG 4 cut(s) 410, 667, 1080, 1123
AsuHPI GGTGA 1 cut(s) 1539
AsuII TTCGAA 1 cut(s) 120
AvaI CYCGRG 1 cut(s) 86
BaeI ACNNNNGTAYC 2 cut(s) 502, 535
BanII GRGCYC 1 cut(s) 964
BbsI GAAGAC 3 cut(s) 151, 1357, 1623
Bbv12I GWGCWC 1 cut(s) 1621
BbvCI CCTCAGC 1 cut(s) 705
BbvI GCAGC 5 cut(s) 156, 351, 928, 980, 1258
BccI CCATC 8 cut(s) 475, 512, 998, 1126, 1154, 1216, 1220, 1423
BceAI ACGGC 2 cut(s) 712, 1009
BciVI GTATCC 1 cut(s) 1111
BclI TGATCA 2 cut(s) 747, 1042
BcnI CCSGG 4 cut(s) 410, 667, 1080, 1123
BcoDI GTCTC 3 cut(s) 906, 1031, 1224
BfaI CTAG 4 cut(s) 191, 948, 1460, 1518
BfmI CTRYAG 3 cut(s) 914, 966, 1269
BfoI RGCGCY 1 cut(s) 599
BfuAI ACCTGC 1 cut(s) 1276
BfuI GTATCC 1 cut(s) 1111
BglI GCCNNNNNGGC 1 cut(s) 554
BisI GCNGC 6 cut(s) 170, 340, 636, 917, 969, 1247
BlsI GCNGC 6 cut(s) 171, 341, 637, 918, 970, 1248
Bme1390I CCNGG 4 cut(s) 410, 667, 1080, 1123
BmeT110I CYCGRG 1 cut(s) 86
BmiI GGNNCC 3 cut(s) 394, 961, 1345
BmrFI CCNGG 4 cut(s) 410, 667, 1080, 1123
BmrI ACTGGG 1 cut(s) 351
BmsI GCATC 4 cut(s) 781, 1081, 1103, 1168
BmuI ACTGGG 1 cut(s) 351
BpiI GAAGAC 3 cut(s) 151, 1357, 1623
BpmI CTGGAG 1 cut(s) 620
Bpu10I CCTNAGC 1 cut(s) 705
Bpu14I TTCGAA 1 cut(s) 120
BpuMI CCSGG 4 cut(s) 410, 667, 1080, 1123
Bsa29I ATCGAT 2 cut(s) 1599, 1609
BsaBI GATNNNNATC 1 cut(s) 1605
BsaHI GRCGYC 1 cut(s) 486
BsaI GGTCTC 1 cut(s) 906
BsaJI CCNNGG 6 cut(s) 319, 371, 489, 734, 1079, 1625
BsaWI WCCGGW 2 cut(s) 152, 1346
BsaXI ACNNNNNCTCC 2 cut(s) 701, 731
Bsc4I CCNNNNNNNGG 3 cut(s) 301, 1081, 1129
Bse118I RCCGGY 2 cut(s) 826, 1354
Bse1I ACTGG 2 cut(s) 357, 743
Bse3DI GCAATG 1 cut(s) 940
Bse8I GATNNNNATC 1 cut(s) 1605
BseAI TCCGGA 2 cut(s) 152, 1346
BseCI ATCGAT 2 cut(s) 1599, 1609
BseDI CCNNGG 6 cut(s) 319, 371, 489, 734, 1079, 1625
BseGI GGATG 8 cut(s) 504, 796, 1118, 1138, 1183, 1227, 1231, 1393
BseJI GATNNNNATC 1 cut(s) 1605
BseLI CCNNNNNNNGG 3 cut(s) 301, 1081, 1129
BseMI GCAATG 1 cut(s) 940
BseMII CTCAG 5 cut(s) 191, 696, 885, 1316, 1466
BseNI ACTGG 2 cut(s) 357, 743
BseXI GCAGC 5 cut(s) 156, 351, 928, 980, 1258
BshFI GGCC 2 cut(s) 137, 408
BshVI ATCGAT 2 cut(s) 1599, 1609
BsiHKAI GWGCWC 1 cut(s) 1621
BsiHKCI CYCGRG 1 cut(s) 86
BsiSI CCGG 9 cut(s) 153, 295, 409, 666, 827, 1079, 1123, 1347, 1355
BslFI GGGAC 1 cut(s) 1458
BslI CCNNNNNNNGG 3 cut(s) 301, 1081, 1129
BsmAI GTCTC 3 cut(s) 906, 1031, 1224
BsmBI CGTCTC 1 cut(s) 1224
BsmFI GGGAC 1 cut(s) 1458
BsnI GGCC 2 cut(s) 137, 408
Bso31I GGTCTC 1 cut(s) 906
BsoBI CYCGRG 1 cut(s) 86
Bsp119I TTCGAA 1 cut(s) 120
Bsp1286I GDGCHC 2 cut(s) 964, 1621
Bsp13I TCCGGA 2 cut(s) 152, 1346
Bsp143I GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
Bsp19I CCATGG 3 cut(s) 319, 489, 1625
BspACI CCGC 9 cut(s) 428, 557, 635, 638, 797, 996, 1191, 1212, 1293
BspANI GGCC 2 cut(s) 137, 408
BspCNI CTCAG 5 cut(s) 192, 697, 886, 1317, 1465
BspDI ATCGAT 2 cut(s) 1599, 1609
BspEI TCCGGA 2 cut(s) 152, 1346
BspLI GGNNCC 3 cut(s) 394, 961, 1345
BspMAI CTGCAG 3 cut(s) 918, 970, 1273
BspMI ACCTGC 1 cut(s) 1276
BspPI GGATC 4 cut(s) 706, 760, 833, 1329
BspT104I TTCGAA 1 cut(s) 120
BspTNI GGTCTC 1 cut(s) 906
BsrDI GCAATG 1 cut(s) 940
BsrFI RCCGGY 2 cut(s) 826, 1354
BsrI ACTGG 2 cut(s) 357, 743
BssAI RCCGGY 2 cut(s) 826, 1354
BssECI CCNNGG 6 cut(s) 319, 371, 489, 734, 1079, 1625
BssMI GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
BssNI GRCGYC 1 cut(s) 486
BssT1I CCWWGG 3 cut(s) 319, 489, 1625
Bst4CI ACNGT 2 cut(s) 335, 1425
Bst6I CTCTTC 1 cut(s) 1391
BstACI GRCGYC 1 cut(s) 486
BstAPI GCANNNNNTGC 1 cut(s) 500
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 5 cut(s) 559, 828, 873, 1191, 1331
BstDEI CTNAG 8 cut(s) 200, 523, 705, 894, 1325, 1418, 1452, 1466
BstDSI CCRYGG 3 cut(s) 319, 489, 1625
BstF5I GGATG 8 cut(s) 504, 796, 1118, 1138, 1183, 1227, 1231, 1393
BstH2I RGCGCY 1 cut(s) 599
BstHHI GCGC 3 cut(s) 436, 598, 1189
BstKTI GATC 9 cut(s) 714, 750, 768, 841, 1045, 1324, 1599, 1609, 1613
BstMAI GTCTC 3 cut(s) 906, 1031, 1224
BstMBI GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
BstMWI GCNNNNNNNGC 8 cut(s) 485, 500, 554, 805, 877, 968, 974, 1199
BstSCI CCNGG 4 cut(s) 408, 665, 1078, 1121
BstSFI CTRYAG 3 cut(s) 914, 966, 1269
BstV1I GCAGC 5 cut(s) 156, 351, 928, 980, 1258
BstV2I GAAGAC 3 cut(s) 151, 1357, 1623
BstX2I RGATCY 2 cut(s) 711, 1321
BstYI RGATCY 2 cut(s) 711, 1321
Bsu15I ATCGAT 2 cut(s) 1599, 1609
BsuI GTATCC 1 cut(s) 1111
BsuRI GGCC 2 cut(s) 137, 408
BsuTUI ATCGAT 2 cut(s) 1599, 1609
BtgI CCRYGG 3 cut(s) 319, 489, 1625
BtgZI GCGATG 2 cut(s) 112, 494
BtsCI GGATG 8 cut(s) 504, 796, 1118, 1138, 1183, 1227, 1231, 1393
BtsI GCAGTG 4 cut(s) 420, 978, 1209, 1278
BtsIMutI CAGTG 5 cut(s) 420, 750, 978, 1209, 1278
BveI ACCTGC 1 cut(s) 1276
Cac8I GCNNGC 5 cut(s) 559, 828, 873, 1191, 1331
CfoI GCGC 3 cut(s) 436, 598, 1189
Cfr10I RCCGGY 2 cut(s) 826, 1354
ClaI ATCGAT 2 cut(s) 1599, 1609
CseI GACGC 1 cut(s) 494
Csp6I GTAC 1 cut(s) 368
CviAII CATG 5 cut(s) 320, 490, 1218, 1614, 1626
CviQI GTAC 1 cut(s) 368
DdeI CTNAG 8 cut(s) 200, 523, 705, 894, 1325, 1418, 1452, 1466
DpnI GATC 9 cut(s) 713, 749, 767, 840, 1044, 1323, 1598, 1608, 1612
DpnII GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
DraI TTTAAA 1 cut(s) 1665
EaeI YGGCCR 1 cut(s) 406
Eam1104I CTCTTC 1 cut(s) 1391
EarI CTCTTC 1 cut(s) 1391
EciI GGCGGA 1 cut(s) 653
Eco130I CCWWGG 3 cut(s) 319, 489, 1625
Eco24I GRGCYC 1 cut(s) 964
Eco31I GGTCTC 1 cut(s) 906
Eco88I CYCGRG 1 cut(s) 86
EcoRI GAATTC 2 cut(s) 116, 1579
EcoT14I CCWWGG 3 cut(s) 319, 489, 1625
EcoT22I ATGCAT 1 cut(s) 1096
EcoT38I GRGCYC 1 cut(s) 964
ErhI CCWWGG 3 cut(s) 319, 489, 1625
Esp3I CGTCTC 1 cut(s) 1224
FaeI CATG 5 cut(s) 323, 493, 1221, 1617, 1629
FaqI GGGAC 1 cut(s) 1458
FatI CATG 5 cut(s) 319, 489, 1217, 1613, 1625
FauI CCCGC 3 cut(s) 550, 1198, 1286
FbaI TGATCA 2 cut(s) 747, 1042
Fnu4HI GCNGC 6 cut(s) 170, 340, 636, 917, 969, 1247
FokI GGATG 8 cut(s) 491, 803, 1105, 1145, 1190, 1234, 1238, 1400
FriOI GRGCYC 1 cut(s) 964
Fsp4HI GCNGC 6 cut(s) 170, 340, 636, 917, 969, 1247
FspBI CTAG 4 cut(s) 191, 948, 1460, 1518
GlaI GCGC 3 cut(s) 435, 597, 1188
GluI GCNGC 6 cut(s) 170, 340, 636, 917, 969, 1247
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 1 cut(s) 599
HaeIII GGCC 2 cut(s) 137, 408
HapII CCGG 9 cut(s) 153, 295, 409, 666, 827, 1079, 1123, 1347, 1355
HgaI GACGC 1 cut(s) 494
HhaI GCGC 3 cut(s) 436, 598, 1189
Hin1I GRCGYC 1 cut(s) 486
Hin1II CATG 5 cut(s) 323, 493, 1221, 1617, 1629
Hin6I GCGC 3 cut(s) 434, 596, 1187
HinP1I GCGC 3 cut(s) 434, 596, 1187
HinfI GANTC 9 cut(s) 143, 156, 176, 349, 473, 569, 611, 662, 910
HpaII CCGG 9 cut(s) 153, 295, 409, 666, 827, 1079, 1123, 1347, 1355
HphI GGTGA 1 cut(s) 1539
Hpy166II GTNNAC 1 cut(s) 331
Hpy188III TCNNGA 5 cut(s) 153, 769, 954, 1256, 1347
Hpy8I GTNNAC 1 cut(s) 331
Hpy99I CGWCG 2 cut(s) 619, 1238
HpyAV CCTTC 5 cut(s) 48, 87, 91, 883, 1333
HpyCH4III ACNGT 2 cut(s) 335, 1425
HpyF10VI GCNNNNNNNGC 8 cut(s) 485, 500, 554, 805, 877, 968, 974, 1199
HpyF3I CTNAG 8 cut(s) 200, 523, 705, 894, 1325, 1418, 1452, 1466
Hsp92I GRCGYC 1 cut(s) 486
Hsp92II CATG 5 cut(s) 323, 493, 1221, 1617, 1629
HspAI GCGC 3 cut(s) 434, 596, 1187
Kpn2I TCCGGA 2 cut(s) 152, 1346
KroI GCCGGC 1 cut(s) 826
KroNI GCCGGC 1 cut(s) 828
Ksp22I TGATCA 2 cut(s) 747, 1042
Kzo9I GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
LmnI GCTCC 4 cut(s) 392, 959, 1214, 1624
Lsp1109I GCAGC 5 cut(s) 156, 351, 928, 980, 1258
LweI GCATC 4 cut(s) 781, 1081, 1103, 1168
MaeI CTAG 4 cut(s) 191, 948, 1460, 1518
MaeIII GTNAC 1 cut(s) 518
MalI GATC 9 cut(s) 713, 749, 767, 840, 1044, 1323, 1598, 1608, 1612
MboI GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
MfeI CAATTG 1 cut(s) 817
MflI RGATCY 2 cut(s) 711, 1321
MhlI GDGCHC 2 cut(s) 964, 1621
MlyI GAGTC 7 cut(s) 165, 170, 482, 578, 620, 671, 919
Mph1103I ATGCAT 1 cut(s) 1096
MroI TCCGGA 2 cut(s) 152, 1346
MroNI GCCGGC 1 cut(s) 826
MseI TTAA 1 cut(s) 1664
MslI CAYNNNNRTG 1 cut(s) 324
MspI CCGG 9 cut(s) 153, 295, 409, 666, 827, 1079, 1123, 1347, 1355
MspR9I CCNGG 4 cut(s) 410, 667, 1080, 1123
MunI CAATTG 1 cut(s) 817
MwoI GCNNNNNNNGC 8 cut(s) 485, 500, 554, 805, 877, 968, 974, 1199
NaeI GCCGGC 1 cut(s) 828
NciI CCSGG 4 cut(s) 410, 667, 1080, 1123
NcoI CCATGG 3 cut(s) 319, 489, 1625
NdeII GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
NgoMIV GCCGGC 1 cut(s) 826
NlaIII CATG 5 cut(s) 323, 493, 1221, 1617, 1629
NlaIV GGNNCC 3 cut(s) 394, 961, 1345
NmeAIII GCCGAG 2 cut(s) 278, 856
NmuCI GTSAC 1 cut(s) 518
NsiI ATGCAT 1 cut(s) 1096
NspV TTCGAA 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 86
PdiI GCCGGC 1 cut(s) 828
PfeI GAWTC 2 cut(s) 143, 349
PfoI TCCNGGA 1 cut(s) 665
PkrI GCNGC 6 cut(s) 171, 341, 637, 918, 970, 1248
PleI GAGTC 7 cut(s) 164, 170, 481, 577, 619, 670, 918
PpsI GAGTC 7 cut(s) 164, 170, 481, 577, 619, 670, 918
PspN4I GGNNCC 3 cut(s) 394, 961, 1345
PspXI VCTCGAGB 1 cut(s) 86
PstI CTGCAG 3 cut(s) 918, 970, 1273
PsuI RGATCY 2 cut(s) 711, 1321
RsaI GTAC 1 cut(s) 369
RsaNI GTAC 1 cut(s) 368
RseI CAYNNNNRTG 1 cut(s) 324
SaqAI TTAA 1 cut(s) 1664
SatI GCNGC 6 cut(s) 170, 340, 636, 917, 969, 1247
Sau3AI GATC 9 cut(s) 711, 747, 765, 838, 1042, 1321, 1596, 1606, 1610
SchI GAGTC 7 cut(s) 165, 170, 482, 578, 620, 671, 919
ScrFI CCNGG 4 cut(s) 410, 667, 1080, 1123
SduI GDGCHC 2 cut(s) 964, 1621
SfaNI GCATC 4 cut(s) 781, 1081, 1103, 1168
SfcI CTRYAG 3 cut(s) 914, 966, 1269
Sfr274I CTCGAG 1 cut(s) 86
SfuI TTCGAA 1 cut(s) 120
SlaI CTCGAG 1 cut(s) 86
SmiMI CAYNNNNRTG 1 cut(s) 324
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SsiI CCGC 9 cut(s) 428, 557, 635, 638, 797, 996, 1191, 1212, 1293
SspI AATATT 1 cut(s) 1588
SspMI CTAG 4 cut(s) 191, 948, 1460, 1518
StyD4I CCNGG 4 cut(s) 408, 665, 1078, 1121
StyI CCWWGG 3 cut(s) 319, 489, 1625
TaaI ACNGT 2 cut(s) 335, 1425
TaqI TCGA 9 cut(s) 87, 120, 213, 419, 536, 867, 1427, 1599, 1609
TauI GCSGC 1 cut(s) 638
TfiI GAWTC 2 cut(s) 143, 349
Tru1I TTAA 1 cut(s) 1664
Tru9I TTAA 1 cut(s) 1664
TscAI CASTG 5 cut(s) 420, 750, 978, 1209, 1278
TseFI GTSAC 1 cut(s) 518
TseI GCWGC 5 cut(s) 169, 339, 916, 968, 1246
Tsp45I GTSAC 1 cut(s) 518
TspDTI ATGAA 1 cut(s) 1149
TspGWI ACGGA 1 cut(s) 506
TspRI CASTG 5 cut(s) 420, 750, 978, 1209, 1278
XapI RAATTY 8 cut(s) 17, 116, 185, 279, 772, 1276, 1510, 1579
XhoI CTCGAG 1 cut(s) 86
XspI CTAG 4 cut(s) 191, 948, 1460, 1518
Zsp2I ATGCAT 1 cut(s) 1096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.