pycom12g15050

At1g04910-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0014239
Physical Location & Seq
Reverse (-)
17457704 .. 17460660
2957 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2001 bp
ATGTCGTCCGGTGGTACGAACAGCTCAACCAACAGTAGTCCGAGACAACCGGCTCTGGTCGCGCTGCCCACGAAGACCAGACGACGGGTGGCTGACGGAGTCATGGAAGCCGGCGAGCGGCTCCCGACGAGCACCCTCCCTCCCGAAAACAACATTGTCTTCGACGACGACGACGATGTGGAAAACGACAGCCTCCTCGACGGAACAATATGCGGGCCCCACCACGTCCTCCACCACAACCACAACCATTATTCGCACCACCCCGTGATGAAGTACCTCCTCCTCCGTCGGCGGCTATTATTCTGCGTGCCCGACACGTGGCTTCTCCCGATCGAGGACGGGTTTCTATGGACGGTCGCGATGTTGCAGTCGCTGAAATCGGGGCGGAACGTGGGCCGCAAGATCTTCGGGGCGCTGCTTTTGTTGGCGGTTATCTCCCTGTTCGTGAAGTTCTCGTTCTTGAGCAGCCACGTCGAGGTGGTTAGGGACGCTGCGAAGAGGACGGAAGGCCAGCTTTTGATTCTGAAGACGGTGAAAGACGATTGGTTGGTGGCGCAGCGGGCCGTCGCCGAGAACCAGGAATCCAACTCCATGCCGAAACGTGTTTTGGAGAGGTTGTTGGAAACCGAATCCTCCACCAAGTTCAAGCGACTTCTCGAGCAGTTGCCTACCCCAGAAATTTGGAGGAAACCCAACAGCGACAATTTTGATAAATGCATAGCTCGACCCAAGAACCGAATAAGAACCGCATCGAAAACAAATGGTTATCTGCTTGTCCATGCCAATGGTGGATTGAATCAAATGAGAACAGGGATATGTGATATGGTAGCCGTTGCAAAGATAATGAATGCTACCCTGGTTCTTCCACTACTGGACCATAAGTCTTTTTGGACGGATCCAAGTGATTTTAAAGATATATTTGACTGGAGGCACTTCATGAAAGTATTGAAAGATGATATTGATATTATTGAGTATTTGCCGACCAAATATGCAGCCGTGAAGCCTCTTCTGAAGGCTCCAGTCTCTTGGTCGAAGGCGAGATACTACAGAAGCGAGATGATCCCGTTGTTAAAGAAGCATAAGGTTATAAAGTTTACACACACGGATTCCCGACTTGCTAACAATGGACTTGCATCCTCCATCCAAAAGCTGAGGTGCCGTGCAAATTACGAGGCCCTTCAGTATGCAAAGGAGATTGAGGATCTTGGGAGAGTTTTGGTTGACAGACTGAGGAACAATAGCAATCCTTATATTGCTCTCCATTTGAGATATGAGAAGGACATGCTTGCCTTCACCGGCTGCAGCCACAACCTCACAGCAGAGGAGTCCGAGGAGCTTCGGGTTATGAGGTACAGCGTCAAACATTGGAAGGAGAAAGTGATCGATAGTGAAGAACGAAGGCTCCAAGGCGGATGCCCATTTTCACCAAGAGAGGCTACCCTATTCCTTAAAGCCATGGGATACCCTTCGACGACTACGATCTACATTGTCGCTGGCGAGATATATGGCAGCAACAGCATGTCTGCTTTTCGCGCTGAGTATCCGAATGTCTTCTCGCACAATACCCTTGCAACAGAAGAGGAGCTAGAGGCCTTCAAGCCATACCAAAATCGCCTTGCAGCCTTGGATTATATAGTAGCAATGGAGAGTGATGTCTTTGTTTATACTTACGATGGTAATATGGCAAAGACAGTGCAGGGACATAGGAGGTTTGAAGGATTTCGGAAGACTATCAACCCTGACAGACAAAATTTTGTTCAACTTGTCGATCAATTGGATAAGGGAGCAATATCATGGGAAAATTTTTCGTCTTCGGTTAAAAATCTGCATTCTGACAGGCTCGGAGCACCATATGCTAGACAGATCGGAGAGTCACCAAGGTTGGAGGAGAACTTCTATGCAAATCCCTTTCCCGGTTGCATCTGTGACAAGACGCAGGAGCGAATGTCTAGCGTGAAGTCTGATGAGAGAAGAAGTATGAGTGTTTTGTCACAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

667

Amino Acids

76.07

Weight (kDa)

8.98

Isoelectric Point (pI)

46.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 256 - 571 2.9e-105 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014239)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37980 AT5G01100
fragaria_vesca FvH4_6g12260
malus_domestica MD04G1144500.v1.1 MD12G1158500.v1.1
prunus_persica Prupe.6G268900_v2.0.a1
pyrus_communis pycom05g13890 pycom12g15050
rosa_chinensis RchiOBHm_Chr3g0464061
rosa_laevigata RLG00000024725
rosa_multiflora Rmu_sc0006492.1_g000019
rosa_roxburghii Rroxscaffold_6G00416010
rosa_rugosa Rorug03G0070500
rosa_samantha Rh3BG131600 Rh3CG133900 Rh3DG132900
rosa_wichuraiana Rw3G010760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1088
AccB1I GGYRCC 1 cut(s) 1155
AccBSI CCGCTC 1 cut(s) 118
AccII CGCG 3 cut(s) 62, 359, 1533
AciI CCGC 9 cut(s) 118, 213, 292, 385, 397, 428, 559, 747, 1410
AclWI GGATC 4 cut(s) 890, 903, 1054, 1209
AcsI RAATTY 3 cut(s) 678, 1750, 1801
AcuI CTGAAG 3 cut(s) 545, 1031, 1163
AcvI CACGTG 1 cut(s) 318
AdeI CACNNNGTG 1 cut(s) 265
AfaI GTAC 3 cut(s) 16, 275, 1352
AfiI CCNNNNNNNGG 6 cut(s) 84, 117, 318, 334, 475, 1913
AflIII ACRYGT 2 cut(s) 315, 601
AgsI TTSAA 6 cut(s) 646, 796, 949, 1597, 1715, 1760
AhdI GACNNNNNGTC 1 cut(s) 880
AjiI CACGTC 2 cut(s) 226, 472
AjnI CCWGG 2 cut(s) 576, 855
AjuI GAANNNNNNNTTGG 2 cut(s) 590, 622
AloI GAACNNNNNNTCC 4 cut(s) 566, 598, 1386, 1418
AluBI AGCT 6 cut(s) 24, 514, 722, 1150, 1336, 1585
AluI AGCT 6 cut(s) 24, 514, 722, 1150, 1336, 1585
Alw21I GWGCWC 2 cut(s) 134, 1849
Alw26I GTCTC 2 cut(s) 37, 1027
AlwI GGATC 4 cut(s) 890, 903, 1054, 1209
AlwNI CAGNNNCTG 1 cut(s) 373
Ama87I CYCGRG 1 cut(s) 656
AoxI GGCC 6 cut(s) 215, 394, 508, 561, 1173, 1590
ApaI GGGCCC 1 cut(s) 219
ApoI RAATTY 3 cut(s) 678, 1750, 1801
Asp700I GAANNNNTTC 2 cut(s) 1550, 1719
AspLEI GCGC 4 cut(s) 64, 415, 556, 1535
AspS9I GGNCC 6 cut(s) 215, 216, 394, 561, 874, 1174
AsuC2I CCSGG 1 cut(s) 1914
AsuHPI GGTGA 4 cut(s) 544, 1285, 1416, 1866
AvaI CYCGRG 1 cut(s) 656
AvaII GGWCC 1 cut(s) 874
BaeGI GKGCMC 2 cut(s) 219, 312
BamHI GGATCC 1 cut(s) 895
BanI GGYRCC 1 cut(s) 1155
BanII GRGCYC 1 cut(s) 219
BarI GAAGNNNNNNTAC 2 cut(s) 1025, 1057
BbrPI CACGTG 1 cut(s) 318
BbsI GAAGAC 6 cut(s) 80, 151, 533, 1543, 1733, 1803
Bbv12I GWGCWC 2 cut(s) 134, 1849
BbvCI CCTCAGC 1 cut(s) 1151
BccI CCATC 2 cut(s) 1148, 1667
BceAI ACGGC 4 cut(s) 548, 815, 980, 1143
BcgI CGANNNNNNTGC 4 cut(s) 388, 422, 454, 488
BciT130I CCWGG 2 cut(s) 578, 857
BciVI GTATCC 2 cut(s) 1454, 1551
BcnI CCSGG 1 cut(s) 1914
BcoDI GTCTC 2 cut(s) 37, 1027
BfaI CTAG 3 cut(s) 1586, 1857, 1950
BfmI CTRYAG 2 cut(s) 1045, 1300
BfoI RGCGCY 1 cut(s) 416
BfuI GTATCC 2 cut(s) 1454, 1551
BglII AGATCT 1 cut(s) 402
Bme1390I CCNGG 3 cut(s) 578, 857, 1914
Bme18I GGWCC 1 cut(s) 874
BmeRI GACNNNNNGTC 1 cut(s) 880
BmeT110I CYCGRG 1 cut(s) 656
BmgBI CACGTC 2 cut(s) 226, 472
BmgT120I GGNCC 6 cut(s) 215, 216, 394, 561, 874, 1174
BmiI GGNNCC 7 cut(s) 122, 217, 218, 897, 1017, 1157, 1403
BmrFI CCNGG 3 cut(s) 578, 857, 1914
BmsI GCATC 4 cut(s) 758, 1142, 1403, 1929
BpiI GAAGAC 6 cut(s) 80, 151, 533, 1543, 1733, 1803
BpmI CTGGAG 2 cut(s) 946, 1002
Bpu10I CCTNAGC 1 cut(s) 1151
BpuEI CTTGAG 1 cut(s) 481
BpuMI CCSGG 1 cut(s) 1914
Bsa29I ATCGAT 1 cut(s) 1383
BsaAI YACGTR 1 cut(s) 318
BsaJI CCNNGG 6 cut(s) 855, 1329, 1405, 1455, 1623, 1877
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 8 cut(s) 124, 154, 602, 632, 1386, 1416, 1931, 1961
Bsc4I CCNNNNNNNGG 6 cut(s) 84, 117, 318, 334, 475, 1913
Bse118I RCCGGY 3 cut(s) 49, 110, 1295
Bse1I ACTGG 3 cut(s) 876, 929, 1019
Bse3DI GCAATG 1 cut(s) 1647
BseBI CCWGG 2 cut(s) 578, 857
BseCI ATCGAT 1 cut(s) 1383
BseDI CCNNGG 6 cut(s) 855, 1329, 1405, 1455, 1623, 1877
BseGI GGATG 3 cut(s) 1133, 1140, 1418
BseLI CCNNNNNNNGG 6 cut(s) 84, 117, 318, 334, 475, 1913
BseMI GCAATG 1 cut(s) 1647
BseMII CTCAG 3 cut(s) 1142, 1220, 1527
BseNI ACTGG 3 cut(s) 876, 929, 1019
BseRI GAGGAG 7 cut(s) 185, 269, 272, 1337, 1346, 1595, 1901
BseSI GKGCMC 2 cut(s) 219, 312
BsgI GTGCAG 1 cut(s) 1715
Bsh1236I CGCG 3 cut(s) 62, 359, 1533
Bsh1285I CGRYCG 2 cut(s) 333, 357
BshFI GGCC 6 cut(s) 217, 396, 510, 563, 1175, 1592
BshNI GGYRCC 1 cut(s) 1155
BshVI ATCGAT 1 cut(s) 1383
BsiEI CGRYCG 2 cut(s) 333, 357
BsiHKAI GWGCWC 2 cut(s) 134, 1849
BsiHKCI CYCGRG 1 cut(s) 656
BsiSI CCGG 5 cut(s) 9, 50, 111, 1296, 1914
BslFI GGGAC 2 cut(s) 500, 1713
BslI CCNNNNNNNGG 6 cut(s) 84, 117, 318, 334, 475, 1913
BsmAI GTCTC 2 cut(s) 37, 1027
BsmFI GGGAC 2 cut(s) 500, 1713
BsmI GAATGC 2 cut(s) 853, 1828
BsnI GGCC 6 cut(s) 217, 396, 510, 563, 1175, 1592
BsoBI CYCGRG 1 cut(s) 656
Bsp120I GGGCCC 1 cut(s) 215
Bsp1286I GDGCHC 4 cut(s) 134, 219, 312, 1849
Bsp143I GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
Bsp19I CCATGG 1 cut(s) 1455
Bsp68I TCGCGA 1 cut(s) 359
BspACI CCGC 9 cut(s) 118, 213, 292, 385, 397, 428, 559, 747, 1410
BspANI GGCC 6 cut(s) 217, 396, 510, 563, 1175, 1592
BspCNI CTCAG 3 cut(s) 1143, 1221, 1528
BspDI ATCGAT 1 cut(s) 1383
BspFNI CGCG 3 cut(s) 62, 359, 1533
BspHI TCATGA 1 cut(s) 936
BspLI GGNNCC 7 cut(s) 122, 217, 218, 897, 1017, 1157, 1403
BspMAI CTGCAG 1 cut(s) 1304
BspPI GGATC 4 cut(s) 890, 903, 1054, 1209
BspT107I GGYRCC 1 cut(s) 1155
BsrBI CCGCTC 1 cut(s) 118
BsrDI GCAATG 1 cut(s) 1647
BsrFI RCCGGY 3 cut(s) 49, 110, 1295
BsrI ACTGG 3 cut(s) 876, 929, 1019
BssAI RCCGGY 3 cut(s) 49, 110, 1295
BssECI CCNNGG 6 cut(s) 855, 1329, 1405, 1455, 1623, 1877
BssMI GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
BssT1I CCWWGG 4 cut(s) 1405, 1455, 1623, 1877
Bst2UI CCWGG 2 cut(s) 578, 857
Bst4CI ACNGT 4 cut(s) 35, 355, 532, 1693
Bst6I CTCTTC 3 cut(s) 491, 1011, 1572
BstAPI GCANNNNNTGC 1 cut(s) 1853
BstBAI YACGTR 1 cut(s) 318
BstC8I GCNNGC 8 cut(s) 112, 116, 215, 308, 512, 561, 1287, 1495
BstDEI CTNAG 3 cut(s) 1151, 1229, 1536
BstDSI CCRYGG 1 cut(s) 1455
BstF5I GGATG 3 cut(s) 1133, 1140, 1418
BstFNI CGCG 3 cut(s) 62, 359, 1533
BstH2I RGCGCY 1 cut(s) 416
BstHHI GCGC 4 cut(s) 64, 415, 556, 1535
BstKTI GATC 9 cut(s) 333, 405, 898, 1062, 1204, 1383, 1482, 1771, 1866
BstMAI GTCTC 2 cut(s) 37, 1027
BstMBI GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
BstMCI CGRYCG 2 cut(s) 333, 357
BstMWI GCNNNNNNNGC 5 cut(s) 59, 560, 1515, 1532, 1853
BstNI CCWGG 2 cut(s) 578, 857
BstNSI RCATGY 2 cut(s) 1285, 1522
BstSCI CCNGG 3 cut(s) 576, 855, 1912
BstSFI CTRYAG 2 cut(s) 1045, 1300
BstSLI GKGCMC 2 cut(s) 219, 312
BstUI CGCG 3 cut(s) 62, 359, 1533
BstV2I GAAGAC 6 cut(s) 80, 151, 533, 1543, 1733, 1803
BstX2I RGATCY 3 cut(s) 402, 895, 1201
BstXI CCANNNNNNTGG 3 cut(s) 681, 785, 1026
BstYI RGATCY 3 cut(s) 402, 895, 1201
Bsu15I ATCGAT 1 cut(s) 1383
BsuI GTATCC 2 cut(s) 1454, 1551
BsuRI GGCC 6 cut(s) 217, 396, 510, 563, 1175, 1592
BsuTUI ATCGAT 1 cut(s) 1383
BtgI CCRYGG 1 cut(s) 1455
BtgZI GCGATG 1 cut(s) 374
BtrI CACGTC 2 cut(s) 226, 472
BtsCI GGATG 3 cut(s) 1133, 1140, 1418
BtsIMutI CAGTG 1 cut(s) 1698
BtuMI TCGCGA 1 cut(s) 359
Cac8I GCNNGC 8 cut(s) 112, 116, 215, 308, 512, 561, 1287, 1495
CaiI CAGNNNCTG 1 cut(s) 373
CciI TCATGA 1 cut(s) 936
CfoI GCGC 4 cut(s) 64, 415, 556, 1535
Cfr10I RCCGGY 3 cut(s) 49, 110, 1295
Cfr13I GGNCC 6 cut(s) 215, 216, 394, 561, 874, 1174
ClaI ATCGAT 1 cut(s) 1383
CseI GACGC 3 cut(s) 497, 1345, 1942
Csp6I GTAC 3 cut(s) 15, 274, 1351
CviAII CATG 8 cut(s) 103, 592, 779, 937, 1282, 1456, 1519, 1794
CviQI GTAC 3 cut(s) 15, 274, 1351
DdeI CTNAG 3 cut(s) 1151, 1229, 1536
DpnI GATC 9 cut(s) 332, 404, 897, 1061, 1203, 1382, 1481, 1770, 1865
DpnII GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
DraI TTTAAA 1 cut(s) 910
DraIII CACNNNGTG 1 cut(s) 265
DriI GACNNNNNGTC 1 cut(s) 880
Eam1104I CTCTTC 3 cut(s) 491, 1011, 1572
Eam1105I GACNNNNNGTC 1 cut(s) 880
EarI CTCTTC 3 cut(s) 491, 1011, 1572
EciI GGCGGA 2 cut(s) 400, 1425
Eco130I CCWWGG 4 cut(s) 1405, 1455, 1623, 1877
Eco147I AGGCCT 1 cut(s) 1592
Eco24I GRGCYC 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 874
Eco57I CTGAAG 3 cut(s) 545, 1031, 1163
Eco72I CACGTG 1 cut(s) 318
Eco88I CYCGRG 1 cut(s) 656
EcoO109I RGGNCCY 2 cut(s) 216, 1174
EcoRII CCWGG 2 cut(s) 576, 855
EcoT14I CCWWGG 4 cut(s) 1405, 1455, 1623, 1877
EcoT22I ATGCAT 1 cut(s) 719
EcoT38I GRGCYC 1 cut(s) 219
ErhI CCWWGG 4 cut(s) 1405, 1455, 1623, 1877
FaeI CATG 8 cut(s) 106, 595, 782, 940, 1285, 1459, 1522, 1797
FalI AAGNNNNNCTT 2 cut(s) 498, 530
FaqI GGGAC 2 cut(s) 500, 1713
FatI CATG 8 cut(s) 102, 591, 778, 936, 1281, 1455, 1518, 1793
FauI CCCGC 2 cut(s) 206, 552
FauNDI CATATG 1 cut(s) 1852
FokI GGATG 3 cut(s) 1120, 1127, 1425
FriOI GRGCYC 1 cut(s) 219
FspBI CTAG 3 cut(s) 1586, 1857, 1950
GlaI GCGC 4 cut(s) 63, 414, 555, 1534
GsuI CTGGAG 2 cut(s) 946, 1002
HaeII RGCGCY 1 cut(s) 416
HaeIII GGCC 6 cut(s) 217, 396, 510, 563, 1175, 1592
HapII CCGG 5 cut(s) 9, 50, 111, 1296, 1914
HgaI GACGC 3 cut(s) 497, 1345, 1942
HhaI GCGC 4 cut(s) 64, 415, 556, 1535
Hin1II CATG 8 cut(s) 106, 595, 782, 940, 1285, 1459, 1522, 1797
Hin6I GCGC 4 cut(s) 62, 413, 554, 1533
HinP1I GCGC 4 cut(s) 62, 413, 554, 1533
HincII GTYRAC 1 cut(s) 1222
HindII GTYRAC 1 cut(s) 1222
HinfI GANTC 8 cut(s) 99, 520, 581, 629, 796, 1106, 1325, 1871
HpaII CCGG 5 cut(s) 9, 50, 111, 1296, 1914
HphI GGTGA 4 cut(s) 544, 1285, 1416, 1866
Hpy166II GTNNAC 2 cut(s) 1095, 1222
Hpy188III TCNNGA 9 cut(s) 124, 143, 328, 358, 445, 460, 656, 937, 1110
Hpy8I GTNNAC 2 cut(s) 1095, 1222
HpyCH4III ACNGT 4 cut(s) 35, 355, 532, 1693
HpyCH4IV ACGT 5 cut(s) 225, 317, 390, 471, 601
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 560, 1515, 1532, 1853
HpyF3I CTNAG 3 cut(s) 1151, 1229, 1536
HpySE526I ACGT 5 cut(s) 225, 317, 390, 471, 601
Hsp92II CATG 8 cut(s) 106, 595, 782, 940, 1285, 1459, 1522, 1797
HspAI GCGC 4 cut(s) 62, 413, 554, 1533
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Kzo9I GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
LmnI GCTCC 8 cut(s) 126, 1021, 1333, 1407, 1582, 1784, 1844, 1939
LweI GCATC 4 cut(s) 758, 1142, 1403, 1929
MaeI CTAG 3 cut(s) 1586, 1857, 1950
MaeII ACGT 5 cut(s) 225, 317, 390, 471, 601
MaeIII GTNAC 3 cut(s) 1872, 1925, 1989
MalI GATC 9 cut(s) 332, 404, 897, 1061, 1203, 1382, 1481, 1770, 1865
MbiI CCGCTC 1 cut(s) 118
MboI GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
MfeI CAATTG 1 cut(s) 1772
MflI RGATCY 3 cut(s) 402, 895, 1201
MhlI GDGCHC 4 cut(s) 134, 219, 312, 1849
MluCI AATT 6 cut(s) 678, 703, 1165, 1750, 1772, 1801
MlyI GAGTC 3 cut(s) 108, 1334, 1880
MmeI TCCRAC 3 cut(s) 600, 609, 1863
Mph1103I ATGCAT 1 cut(s) 719
MroNI GCCGGC 1 cut(s) 110
MroXI GAANNNNTTC 2 cut(s) 1550, 1719
MseI TTAA 4 cut(s) 909, 1070, 1449, 1818
MslI CAYNNNNRTG 1 cut(s) 783
MspA1I CMGCKG 1 cut(s) 559
MspI CCGG 5 cut(s) 9, 50, 111, 1296, 1914
MspR9I CCNGG 3 cut(s) 578, 857, 1914
MunI CAATTG 1 cut(s) 1772
Mva1269I GAATGC 2 cut(s) 853, 1828
MvaI CCWGG 2 cut(s) 578, 857
MvnI CGCG 3 cut(s) 62, 359, 1533
MwoI GCNNNNNNNGC 5 cut(s) 59, 560, 1515, 1532, 1853
NaeI GCCGGC 1 cut(s) 112
NciI CCSGG 1 cut(s) 1914
NcoI CCATGG 1 cut(s) 1455
NdeI CATATG 1 cut(s) 1852
NdeII GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
NgoMIV GCCGGC 1 cut(s) 110
NlaIII CATG 8 cut(s) 106, 595, 782, 940, 1285, 1459, 1522, 1797
NlaIV GGNNCC 7 cut(s) 122, 217, 218, 897, 1017, 1157, 1403
NmeAIII GCCGAG 1 cut(s) 595
NmuCI GTSAC 3 cut(s) 1872, 1925, 1989
NruI TCGCGA 1 cut(s) 359
NsiI ATGCAT 1 cut(s) 719
NspI RCATGY 2 cut(s) 1285, 1522
PaeR7I CTCGAG 1 cut(s) 656
PagI TCATGA 1 cut(s) 936
PceI AGGCCT 1 cut(s) 1592
PcsI WCGNNNNNNNCGW 3 cut(s) 168, 171, 1475
PctI GAATGC 2 cut(s) 853, 1828
PdiI GCCGGC 1 cut(s) 112
PdmI GAANNNNTTC 2 cut(s) 1550, 1719
PfeI GAWTC 5 cut(s) 520, 581, 629, 796, 1106
PflFI GACNNNGTC 1 cut(s) 98
Ple19I CGATCG 1 cut(s) 333
PleI GAGTC 3 cut(s) 107, 1333, 1879
PmaCI CACGTG 1 cut(s) 318
PmlI CACGTG 1 cut(s) 318
PpsI GAGTC 3 cut(s) 107, 1333, 1879
Ppu21I YACGTR 1 cut(s) 318
PsiI TTATAA 1 cut(s) 1088
Psp6I CCWGG 2 cut(s) 576, 855
PspCI CACGTG 1 cut(s) 318
PspGI CCWGG 2 cut(s) 576, 855
PspN4I GGNNCC 7 cut(s) 122, 217, 218, 897, 1017, 1157, 1403
PspOMI GGGCCC 1 cut(s) 215
PspPI GGNCC 6 cut(s) 215, 216, 394, 561, 874, 1174
PstI CTGCAG 1 cut(s) 1304
PstNI CAGNNNCTG 1 cut(s) 373
PsuI RGATCY 3 cut(s) 402, 895, 1201
PsyI GACNNNGTC 1 cut(s) 98
PvuI CGATCG 1 cut(s) 333
RruI TCGCGA 1 cut(s) 359
RsaI GTAC 3 cut(s) 16, 275, 1352
RsaNI GTAC 3 cut(s) 15, 274, 1351
RseI CAYNNNNRTG 1 cut(s) 783
SaqAI TTAA 4 cut(s) 909, 1070, 1449, 1818
Sau3AI GATC 9 cut(s) 330, 402, 895, 1059, 1201, 1380, 1479, 1768, 1863
Sau96I GGNCC 6 cut(s) 215, 216, 394, 561, 874, 1174
SchI GAGTC 3 cut(s) 108, 1334, 1880
ScrFI CCNGG 3 cut(s) 578, 857, 1914
SduI GDGCHC 4 cut(s) 134, 219, 312, 1849
SfaNI GCATC 4 cut(s) 758, 1142, 1403, 1929
SfcI CTRYAG 2 cut(s) 1045, 1300
Sfr274I CTCGAG 1 cut(s) 656
SinI GGWCC 1 cut(s) 874
SlaI CTCGAG 1 cut(s) 656
SmiMI CAYNNNNRTG 1 cut(s) 783
SmlI CTYRAG 2 cut(s) 460, 656
SmoI CTYRAG 2 cut(s) 460, 656
Sse9I AATT 6 cut(s) 678, 703, 1165, 1750, 1772, 1801
SseBI AGGCCT 1 cut(s) 1592
SsiI CCGC 9 cut(s) 118, 213, 292, 385, 397, 428, 559, 747, 1410
SspMI CTAG 3 cut(s) 1586, 1857, 1950
StuI AGGCCT 1 cut(s) 1592
StyD4I CCNGG 3 cut(s) 576, 855, 1912
StyI CCWWGG 4 cut(s) 1405, 1455, 1623, 1877
TaaI ACNGT 4 cut(s) 35, 355, 532, 1693
TaiI ACGT 5 cut(s) 228, 320, 393, 474, 604
TasI AATT 6 cut(s) 678, 703, 1165, 1750, 1772, 1801
TauI GCSGC 3 cut(s) 121, 295, 399
TfiI GAWTC 5 cut(s) 520, 581, 629, 796, 1106
Tru1I TTAA 4 cut(s) 909, 1070, 1449, 1818
Tru9I TTAA 4 cut(s) 909, 1070, 1449, 1818
TscAI CASTG 1 cut(s) 1698
TseFI GTSAC 3 cut(s) 1872, 1925, 1989
Tsp45I GTSAC 3 cut(s) 1872, 1925, 1989
TspDTI ATGAA 4 cut(s) 284, 860, 925, 953
TspGWI ACGGA 6 cut(s) 111, 216, 275, 518, 908, 1118
TspRI CASTG 1 cut(s) 1698
Tth111I GACNNNGTC 1 cut(s) 98
VpaK11BI GGWCC 1 cut(s) 874
XapI RAATTY 3 cut(s) 678, 1750, 1801
XceI RCATGY 2 cut(s) 1285, 1522
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 785
XhoI CTCGAG 1 cut(s) 656
XmnI GAANNNNTTC 2 cut(s) 1550, 1719
XspI CTAG 3 cut(s) 1586, 1857, 1950
Zsp2I ATGCAT 1 cut(s) 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.