Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0015288

Physical Location & Seq

Genomic Coordinates Reverse (-)

19501068 .. 19503303

Gene Structure 2236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g17160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGACTTATGACCCAAAAAAAAACATATGGGCCGTTTCCAGCCCGTTAACATGCCCAAAATACTACATGTCGTTTTTATTGTCTTGGTCATTCGCTTTCCAACTGCACAGCAGAGTTGCAAGAAGTTGCAGAAACCAAAGAATACAGACGAGTATTTCCAACCTGAAACAAACAGATGACCGCAAACAATTGGAACTCGAAATCGAATCAAGAATGGTGAGAGCCTCTGCACTAAAACCCAGCAGCAAATTCTTCCTGAGAAAGCACAGGAAATGGCCAGTGTCGCCCTACAACACCAGGTGGCACCAAATCTTCAACCAAAACCAAGCCTTCCAGAGCCTCAAGAAATCATCGCCGCCGCCGGAAAACCAGCCGCACCTCCTTCTTCCGACGCTCGTTTACTCCTTCAACACCTACAACGTCGACCCAACTCCGGAAGCCTACCACTTTGTCCTCAAAACTCTCACCAAAACCGCCCAATTCGACCACATCGCTCCGGTTCTCCGCCGGCTCGAAACAGTCGAAAAGTTCGACACCCCGGAGCATAGTTTTGCCCATCTGATTGGTTTTTATGGCCGTTGGAACAGAACCCAGGACGCCATTGATCTGTTTTACAGGATTCCCAGGTTCAGGTGTGTCCCTTCTGCTCACTCTCTCAATGCATTGCTGTATGTGCTTTGTGGGTCCTGTGAAGGTCTTAAATTGGTGCCTGAGATTTTGCTCAGGAGCCATGTAATGGGCATCCGGCTCGAAGAATCGAGCTTTCGGTTTTTAATCAATGCACTGTGTGGAATTGGGAAGGTTGGATATGCTATTGACATTATGAATTGTATGATGAATAATGGGTATGGTTTGAATGTGAAGATTTGCTCTTTGATATTGTCATCAATGTGTGAGCAGAAGGATTCGGAGGGTGTTGATGTTATGGGGTTTTTGGGAGAAATGCAGAAGCTTGGGTTTTGTCCTGGGATGATGGACTATTCCAATGTGATTAGGTTTATGGTGAAGCAGGGGCGGGGTTTGCATGCCTTAAATGTGTTGATTAAGATGAAAGGGGAAGGAATTAAGCCTGACGTTATTTGTTATACCATGGTCTTACATGGTGTCATCACGGAAGGGGATTTCAAGAAGGCGGATCAGGTTTTTGATGAGTTGCTTGTGTTGGGTTTGGTTCCTGATGTATATACTTACAATGTATATATAAATGGTTTGTGTAAGCAGAATAAAGTTGAATCGGGATTGATGATGATTTCTTCTATGGACGAGTTGGGTTGCAAGCCTAATTTGATTACTTACAACATCTTGCTGAAGGCCCTGTGTAACAATGGGGAGCTTAGGAGGGTGAGAGAGCTTATGCGTGAGATGACTTTAAACGGTGTTGGGGTAAACTTGCAGACGCATAGGATTATGCTGGATGGTCTGTTTGGCAAAGGAAACATTGAGGAAGCTTGTGTTTTTATGGAAGAAATGTTAGATAAGGTTCTTGTTCGTTTTTGTTCCTCTTTCGATGAGGTGATCTATGGGTTGTGCCAAAGGGGTTTGGTTTGTAAAGCAATGGAATTGCTGAAGAAAATGGTTGACAAGAACGTTGCGCCTGGAGCAAAGGCTTGGGAAGCACTGCTCCTTAGCTCAGGATCTGAACCCAGCTTAGAAGAGACTACTTGGACGGGTTTGGTGGAGCCAATGGGTCTCAGAGTTAACTTGCAGACTCACAGGATTCTGTTGGATGGTTCGTCTGGCAAAGGAGACGTTGATGAAGCTTGTGTCTTTATGGAAGAAATGTTATACAAGGTTCTCGTTCGTTTTTGTTCCTCATTCAGTGAGGTAATTTACTGGTTGTGCCAAAGGGGTTTGGTTTGTAAAGCAATGGAATTGCTCAAGAAAATGGTTGACAAGAACGTTGCGTCAAGACCAAAGGCTAGGGAAGCACTGCTCCGAACCCGGTTTAGAACTACTTGGACTGGTTTGGTGGAGCCAGTTATAGCACCAACAGATAACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031054 GO:0032296 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 dsrm

Protein Analysis

668

Amino Acids

75.92

Weight (kDa)

8.79

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	327 - 369	1.2e-06	PPR repeat family
PPR_long	PF17177	343 - 462	4.9e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	346 - 402	3.6e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	357 - 406	1.9e-13	PPR repeat family
PPR_3	PF13812	381 - 441	2.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	389 - 420	1.1e-06	PPR repeat
PPR_2	PF13041	392 - 441	7.6e-17	PPR repeat family
PPR_1	PF12854	424 - 456	4.3e-09	PPR repeat
PPR_2	PF13041	427 - 474	5e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38420
fragaria_vesca	FvH4_6g10340
malus_domestica	MD04G1169100.v1.1 MD12G1182800.v1.1
prunus_persica	Prupe.6G287300_v2.0.a1
pyrus_communis	pycom04g14980 pycom12g17160
rosa_laevigata	RLG00000024949
rosa_multiflora	Rmu_sc0001521.1_g000049
rosa_roxburghii	Rroxscaffold_6G00418830
rosa_rugosa	Rorug03G0048500 Rorug03G0048700
rosa_samantha	Rh3BG110100 Rh3CG111600 Rh3DG111700
rosa_wichuraiana	Rw3G009060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	303, 706
AccB7I	CCANNNNNTGG	1 cut(s)	736
AccI	GTMKAC	1 cut(s)	423
AccIII	TCCGGA	1 cut(s)	433
AciI	CCGC	8 cut(s)	181, 356, 359, 374, 474, 505, 1015, 1133
AclI	AACGTT	2 cut(s)	1587, 1899
AclWI	GGATC	2 cut(s)	1143, 1642
AcoI	YGGCCR	2 cut(s)	275, 574
AcsI	RAATTY	1 cut(s)	248
AcuI	CTGAAG	2 cut(s)	1328, 1586
AcyI	GRCGYC	1 cut(s)	597
AdeI	CACNNNGTG	2 cut(s)	300, 788
AfiI	CCNNNNNNNGG	3 cut(s)	433, 630, 736
AflIII	ACRYGT	1 cut(s)	66
AgsI	TTSAA	5 cut(s)	316, 409, 856, 1126, 1232
AjnI	CCWGG	5 cut(s)	296, 591, 623, 964, 1594
AluBI	AGCT	8 cut(s)	762, 952, 1333, 1351, 1448, 1629, 1647, 1760
AluI	AGCT	8 cut(s)	762, 952, 1333, 1351, 1448, 1629, 1647, 1760
Alw26I	GTCTC	3 cut(s)	1649, 1694, 1740
AlwI	GGATC	2 cut(s)	1143, 1642
AlwNI	CAGNNNCTG	1 cut(s)	1637
Aor13HI	TCCGGA	1 cut(s)	433
AoxI	GGCC	4 cut(s)	30, 275, 574, 1311
ApeKI	GCWGC	1 cut(s)	243
ApoI	RAATTY	1 cut(s)	248
AspLEI	GCGC	1 cut(s)	1594
AspS9I	GGNCC	3 cut(s)	30, 684, 1312
AsuC2I	CCSGG	2 cut(s)	539, 1942
AsuHPI	GGTGA	5 cut(s)	229, 457, 1015, 1354, 1525
AvaII	GGWCC	1 cut(s)	684
BalI	TGGCCA	1 cut(s)	277
BanI	GGYRCC	2 cut(s)	303, 706
BbvI	GCAGC	1 cut(s)	255
BccI	CCATC	4 cut(s)	564, 967, 1409, 1721
BceAI	ACGGC	2 cut(s)	17, 561
BcgI	CGANNNNNNTGC	2 cut(s)	730, 764
BciT130I	CCWGG	5 cut(s)	298, 593, 625, 966, 1596
BcnI	CCSGG	2 cut(s)	539, 1942
BcoDI	GTCTC	3 cut(s)	1649, 1694, 1740
BfaI	CTAG	1 cut(s)	1920
BisI	GCNGC	4 cut(s)	244, 356, 359, 374
BlsI	GCNGC	4 cut(s)	245, 357, 360, 375
Bme1390I	CCNGG	7 cut(s)	298, 539, 593, 625, 966, 1596, 1942
Bme18I	GGWCC	1 cut(s)	684
BmgT120I	GGNCC	3 cut(s)	30, 684, 1312
BmiI	GGNNCC	7 cut(s)	305, 685, 708, 728, 1173, 1680, 1974
BmrFI	CCNGG	7 cut(s)	298, 539, 593, 625, 966, 1596, 1942
BmsI	GCATC	1 cut(s)	750
BpmI	CTGGAG	1 cut(s)	1617
Bpu10I	CCTNAGC	4 cut(s)	722, 1334, 1625, 1630
BpuEI	CTTGAG	2 cut(s)	326, 1862
BpuMI	CCSGG	2 cut(s)	539, 1942
BsaHI	GRCGYC	1 cut(s)	597
BsaI	GGTCTC	1 cut(s)	1694
BsaJI	CCNNGG	5 cut(s)	537, 591, 623, 965, 1089
BsaWI	WCCGGW	2 cut(s)	433, 496
Bsc4I	CCNNNNNNNGG	3 cut(s)	433, 630, 736
Bse118I	RCCGGY	1 cut(s)	507
Bse1I	ACTGG	5 cut(s)	278, 1838, 1966, 1976, 1999
Bse3DI	GCAATG	3 cut(s)	662, 1560, 1872
BseAI	TCCGGA	1 cut(s)	433
BseBI	CCWGG	5 cut(s)	298, 593, 625, 966, 1596
BseDI	CCNNGG	5 cut(s)	537, 591, 623, 965, 1089
BseGI	GGATG	4 cut(s)	741, 975, 1420, 1732
BseLI	CCNNNNNNNGG	3 cut(s)	433, 630, 736
BseMI	GCAATG	3 cut(s)	662, 1560, 1872
BseMII	CTCAG	5 cut(s)	248, 702, 736, 1644, 1705
BseNI	ACTGG	5 cut(s)	278, 1838, 1966, 1976, 1999
BseXI	GCAGC	1 cut(s)	255
BseYI	CCCAGC	2 cut(s)	239, 1643
BsgI	GTGCAG	2 cut(s)	89, 213
BshFI	GGCC	4 cut(s)	32, 277, 576, 1313
BshNI	GGYRCC	2 cut(s)	303, 706
BsiSI	CCGG	7 cut(s)	362, 434, 497, 508, 539, 745, 1942
BslFI	GGGAC	1 cut(s)	623
BslI	CCNNNNNNNGG	3 cut(s)	433, 630, 736
BsmAI	GTCTC	3 cut(s)	1649, 1694, 1740
BsmBI	CGTCTC	1 cut(s)	1740
BsmFI	GGGAC	1 cut(s)	623
BsnI	GGCC	4 cut(s)	32, 277, 576, 1313
Bso31I	GGTCTC	1 cut(s)	1694
Bsp13I	TCCGGA	1 cut(s)	433
Bsp143I	GATC	4 cut(s)	604, 1135, 1515, 1634
Bsp19I	CCATGG	1 cut(s)	1089
BspACI	CCGC	8 cut(s)	181, 356, 359, 374, 474, 505, 1015, 1133
BspANI	GGCC	4 cut(s)	32, 277, 576, 1313
BspCNI	CTCAG	5 cut(s)	249, 703, 735, 1643, 1704
BspEI	TCCGGA	1 cut(s)	433
BspLI	GGNNCC	7 cut(s)	305, 685, 708, 728, 1173, 1680, 1974
BspPI	GGATC	2 cut(s)	1143, 1642
BspT107I	GGYRCC	2 cut(s)	303, 706
BspTNI	GGTCTC	1 cut(s)	1694
BsrDI	GCAATG	3 cut(s)	662, 1560, 1872
BsrFI	RCCGGY	1 cut(s)	507
BsrI	ACTGG	5 cut(s)	278, 1838, 1966, 1976, 1999
BssAI	RCCGGY	1 cut(s)	507
BssECI	CCNNGG	5 cut(s)	537, 591, 623, 965, 1089
BssMI	GATC	4 cut(s)	604, 1135, 1515, 1634
BssNI	GRCGYC	1 cut(s)	597
BssT1I	CCWWGG	1 cut(s)	1089
Bst2UI	CCWGG	5 cut(s)	298, 593, 625, 966, 1596
Bst4CI	ACNGT	3 cut(s)	520, 786, 1376
Bst6I	CTCTTC	1 cut(s)	1647
BstACI	GRCGYC	1 cut(s)	597
BstC8I	GCNNGC	3 cut(s)	509, 1026, 1277
BstDEI	CTNAG	8 cut(s)	257, 711, 722, 1334, 1625, 1630, 1648, 1691
BstDSI	CCRYGG	1 cut(s)	1089
BstF5I	GGATG	4 cut(s)	741, 975, 1420, 1732
BstHHI	GCGC	1 cut(s)	1594
BstKTI	GATC	4 cut(s)	607, 1138, 1518, 1637
BstMAI	GTCTC	3 cut(s)	1649, 1694, 1740
BstMBI	GATC	4 cut(s)	604, 1135, 1515, 1634
BstMWI	GCNNNNNNNGC	6 cut(s)	283, 673, 1021, 1598, 1613, 1925
BstNI	CCWGG	5 cut(s)	298, 593, 625, 966, 1596
BstNSI	RCATGY	3 cut(s)	54, 70, 1028
BstSCI	CCNGG	7 cut(s)	296, 537, 591, 623, 964, 1594, 1940
BstV1I	GCAGC	1 cut(s)	255
BstX2I	RGATCY	1 cut(s)	1634
BstXI	CCANNNNNNTGG	1 cut(s)	563
BstYI	RGATCY	1 cut(s)	1634
BsuRI	GGCC	4 cut(s)	32, 277, 576, 1313
BtgI	CCRYGG	1 cut(s)	1089
BtgZI	GCGATG	2 cut(s)	336, 475
BtsCI	GGATG	4 cut(s)	741, 975, 1420, 1732
BtsI	GCAGTG	2 cut(s)	1616, 1928
BtsIMutI	CAGTG	5 cut(s)	285, 782, 1616, 1825, 1928
Cac8I	GCNNGC	3 cut(s)	509, 1026, 1277
CaiI	CAGNNNCTG	1 cut(s)	1637
CfoI	GCGC	1 cut(s)	1594
Cfr10I	RCCGGY	1 cut(s)	507
Cfr13I	GGNCC	3 cut(s)	30, 684, 1312
CseI	GACGC	4 cut(s)	400, 605, 1405, 1893
CsiI	ACCWGGT	1 cut(s)	296
CviAII	CATG	6 cut(s)	51, 67, 731, 1025, 1090, 1100
DdeI	CTNAG	8 cut(s)	257, 711, 722, 1334, 1625, 1630, 1648, 1691
DpnI	GATC	4 cut(s)	606, 1137, 1517, 1636
DpnII	GATC	4 cut(s)	604, 1135, 1515, 1634
DraI	TTTAAA	1 cut(s)	1371
DraIII	CACNNNGTG	2 cut(s)	300, 788
EaeI	YGGCCR	2 cut(s)	275, 574
Eam1104I	CTCTTC	1 cut(s)	1647
EarI	CTCTTC	1 cut(s)	1647
EciI	GGCGGA	2 cut(s)	494, 1148
Eco130I	CCWWGG	1 cut(s)	1089
Eco31I	GGTCTC	1 cut(s)	1694
Eco47I	GGWCC	1 cut(s)	684
Eco57I	CTGAAG	2 cut(s)	1328, 1586
EcoO109I	RGGNCCY	2 cut(s)	684, 1312
EcoRII	CCWGG	5 cut(s)	296, 591, 623, 964, 1594
EcoT14I	CCWWGG	1 cut(s)	1089
EcoT22I	ATGCAT	1 cut(s)	664
ErhI	CCWWGG	1 cut(s)	1089
Esp3I	CGTCTC	1 cut(s)	1740
FaeI	CATG	6 cut(s)	54, 70, 734, 1028, 1093, 1103
FaqI	GGGAC	1 cut(s)	623
FatI	CATG	6 cut(s)	50, 66, 730, 1024, 1089, 1099
FauI	CCCGC	1 cut(s)	1008
FauNDI	CATATG	1 cut(s)	26
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	4 cut(s)	244, 356, 359, 374
FokI	GGATG	4 cut(s)	728, 982, 1427, 1739
Fsp4HI	GCNGC	4 cut(s)	244, 356, 359, 374
FspBI	CTAG	1 cut(s)	1920
GlaI	GCGC	1 cut(s)	1593
GluI	GCNGC	4 cut(s)	244, 356, 359, 374
GsaI	CCCAGC	2 cut(s)	243, 1647
GsuI	CTGGAG	1 cut(s)	1617
HaeIII	GGCC	4 cut(s)	32, 277, 576, 1313
HapII	CCGG	7 cut(s)	362, 434, 497, 508, 539, 745, 1942
HgaI	GACGC	4 cut(s)	400, 605, 1405, 1893
HhaI	GCGC	1 cut(s)	1594
Hin1I	GRCGYC	1 cut(s)	597
Hin1II	CATG	6 cut(s)	54, 70, 734, 1028, 1093, 1103
Hin6I	GCGC	1 cut(s)	1592
HinP1I	GCGC	1 cut(s)	1592
HincII	GTYRAC	5 cut(s)	48, 424, 1579, 1699, 1891
HindII	GTYRAC	5 cut(s)	48, 424, 1579, 1699, 1891
HindIII	AAGCTT	3 cut(s)	950, 1446, 1758
HinfI	GANTC	7 cut(s)	206, 619, 755, 905, 1232, 1708, 1717
HpaI	GTTAAC	2 cut(s)	48, 1699
HpaII	CCGG	7 cut(s)	362, 434, 497, 508, 539, 745, 1942
HphI	GGTGA	5 cut(s)	229, 457, 1015, 1354, 1525
Hpy166II	GTNNAC	7 cut(s)	48, 400, 424, 1387, 1579, 1699, 1891
Hpy188I	TCNGA	6 cut(s)	390, 561, 910, 1639, 1694, 1937
Hpy8I	GTNNAC	7 cut(s)	48, 400, 424, 1387, 1579, 1699, 1891
Hpy99I	CGWCG	2 cut(s)	394, 425
HpyCH4III	ACNGT	3 cut(s)	520, 786, 1376
HpyCH4IV	ACGT	5 cut(s)	420, 1074, 1587, 1749, 1899
HpyF10VI	GCNNNNNNNGC	6 cut(s)	283, 673, 1021, 1598, 1613, 1925
HpyF3I	CTNAG	8 cut(s)	257, 711, 722, 1334, 1625, 1630, 1648, 1691
HpySE526I	ACGT	5 cut(s)	420, 1074, 1587, 1749, 1899
Hsp92I	GRCGYC	1 cut(s)	597
Hsp92II	CATG	6 cut(s)	54, 70, 734, 1028, 1093, 1103
HspAI	GCGC	1 cut(s)	1592
Kpn2I	TCCGGA	1 cut(s)	433
KroI	GCCGGC	1 cut(s)	507
KroNI	GCCGGC	1 cut(s)	509
KspAI	GTTAAC	2 cut(s)	48, 1699
Kzo9I	GATC	4 cut(s)	604, 1135, 1515, 1634
LmnI	GCTCC	9 cut(s)	499, 541, 726, 1330, 1598, 1626, 1678, 1938, 1972
Lsp1109I	GCAGC	1 cut(s)	255
LweI	GCATC	1 cut(s)	750
MabI	ACCWGGT	1 cut(s)	296
MaeI	CTAG	1 cut(s)	1920
MaeII	ACGT	5 cut(s)	420, 1074, 1587, 1749, 1899
MaeIII	GTNAC	1 cut(s)	1319
MalI	GATC	4 cut(s)	606, 1137, 1517, 1636
MboI	GATC	4 cut(s)	604, 1135, 1515, 1634
MfeI	CAATTG	1 cut(s)	188
MflI	RGATCY	1 cut(s)	1634
MlsI	TGGCCA	1 cut(s)	277
MluNI	TGGCCA	1 cut(s)	277
MlyI	GAGTC	1 cut(s)	1702
MmeI	TCCRAC	6 cut(s)	124, 183, 413, 560, 784, 1704
Mox20I	TGGCCA	1 cut(s)	277
Mph1103I	ATGCAT	1 cut(s)	664
MroI	TCCGGA	1 cut(s)	433
MroNI	GCCGGC	1 cut(s)	507
MscI	TGGCCA	1 cut(s)	277
MseI	TTAA	8 cut(s)	47, 699, 773, 1031, 1044, 1065, 1370, 1698
MslI	CAYNNNNRTG	1 cut(s)	889
Msp20I	TGGCCA	1 cut(s)	277
MspI	CCGG	7 cut(s)	362, 434, 497, 508, 539, 745, 1942
MspR9I	CCNGG	7 cut(s)	298, 539, 593, 625, 966, 1596, 1942
MunI	CAATTG	1 cut(s)	188
MvaI	CCWGG	5 cut(s)	298, 593, 625, 966, 1596
MwoI	GCNNNNNNNGC	6 cut(s)	283, 673, 1021, 1598, 1613, 1925
NaeI	GCCGGC	1 cut(s)	509
NciI	CCSGG	2 cut(s)	539, 1942
NcoI	CCATGG	1 cut(s)	1089
NdeI	CATATG	1 cut(s)	26
NdeII	GATC	4 cut(s)	604, 1135, 1515, 1634
NgoMIV	GCCGGC	1 cut(s)	507
NlaIII	CATG	6 cut(s)	54, 70, 734, 1028, 1093, 1103
NlaIV	GGNNCC	7 cut(s)	305, 685, 708, 728, 1173, 1680, 1974
NsiI	ATGCAT	1 cut(s)	664
NspI	RCATGY	3 cut(s)	54, 70, 1028
PaeI	GCATGC	1 cut(s)	1028
PciI	ACATGT	1 cut(s)	66
PcsI	WCGNNNNNNNCGW	2 cut(s)	519, 528
PdiI	GCCGGC	1 cut(s)	509
PfeI	GAWTC	6 cut(s)	206, 619, 755, 905, 1232, 1717
PflMI	CCANNNNNTGG	1 cut(s)	736
PkrI	GCNGC	4 cut(s)	245, 357, 360, 375
PleI	GAGTC	1 cut(s)	1702
PpsI	GAGTC	1 cut(s)	1702
PpuMI	RGGWCCY	1 cut(s)	684
PscI	ACATGT	1 cut(s)	66
Psp1406I	AACGTT	2 cut(s)	1587, 1899
Psp5II	RGGWCCY	1 cut(s)	684
Psp6I	CCWGG	5 cut(s)	296, 591, 623, 964, 1594
PspFI	CCCAGC	2 cut(s)	239, 1643
PspGI	CCWGG	5 cut(s)	296, 591, 623, 964, 1594
PspN4I	GGNNCC	7 cut(s)	305, 685, 708, 728, 1173, 1680, 1974
PspPI	GGNCC	3 cut(s)	30, 684, 1312
PspPPI	RGGWCCY	1 cut(s)	684
PstNI	CAGNNNCTG	1 cut(s)	1637
PsuI	RGATCY	1 cut(s)	1634
RseI	CAYNNNNRTG	1 cut(s)	889
SalI	GTCGAC	1 cut(s)	422
SaqAI	TTAA	8 cut(s)	47, 699, 773, 1031, 1044, 1065, 1370, 1698
SatI	GCNGC	4 cut(s)	244, 356, 359, 374
Sau3AI	GATC	4 cut(s)	604, 1135, 1515, 1634
Sau96I	GGNCC	3 cut(s)	30, 684, 1312
SchI	GAGTC	1 cut(s)	1702
ScrFI	CCNGG	7 cut(s)	298, 539, 593, 625, 966, 1596, 1942
SexAI	ACCWGGT	1 cut(s)	296
SfaNI	GCATC	1 cut(s)	750
SinI	GGWCC	1 cut(s)	684
SmiMI	CAYNNNNRTG	1 cut(s)	889
SmlI	CTYRAG	2 cut(s)	341, 1877
SmoI	CTYRAG	2 cut(s)	341, 1877
SphI	GCATGC	1 cut(s)	1028
SsiI	CCGC	8 cut(s)	181, 356, 359, 374, 474, 505, 1015, 1133
SspMI	CTAG	1 cut(s)	1920
StyD4I	CCNGG	7 cut(s)	296, 537, 591, 623, 964, 1594, 1940
StyI	CCWWGG	1 cut(s)	1089
TaaI	ACNGT	3 cut(s)	520, 786, 1376
TaiI	ACGT	5 cut(s)	423, 1077, 1590, 1752, 1902
TauI	GCSGC	3 cut(s)	358, 361, 376
TfiI	GAWTC	6 cut(s)	206, 619, 755, 905, 1232, 1717
Tru1I	TTAA	8 cut(s)	47, 699, 773, 1031, 1044, 1065, 1370, 1698
Tru9I	TTAA	8 cut(s)	47, 699, 773, 1031, 1044, 1065, 1370, 1698
TscAI	CASTG	5 cut(s)	285, 789, 1623, 1825, 1935
TseI	GCWGC	1 cut(s)	243
TspDTI	ATGAA	4 cut(s)	839, 851, 1064, 1770
TspGWI	ACGGA	1 cut(s)	1127
TspRI	CASTG	5 cut(s)	285, 789, 1623, 1825, 1935
Van91I	CCANNNNNTGG	1 cut(s)	736
VpaK11BI	GGWCC	1 cut(s)	684
XapI	RAATTY	1 cut(s)	248
XceI	RCATGY	3 cut(s)	54, 70, 1028
XmiI	GTMKAC	1 cut(s)	423
XspI	CTAG	1 cut(s)	1920
Zsp2I	ATGCAT	1 cut(s)	664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.