Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0015288

Physical Location & Seq

Genomic Coordinates Forward (+)

40379916 .. 40383367

Gene Structure 3452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00418830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGTCAGAACCTCTTCCCTCACACCCAGAAGCAAATTCTTCTTAAGAAAACACAGAAAATGGCCAGTCTCACCCAACAACACCAAATGGCACACCCTCTTCAATCAACACCAAGCACTGCAATCCCTCAAACACTCCCCACTAAACCCACCCCAAAACCTTCTCTCCACACTCATCCACTCTTTCAAAACCTTCAACTCTGACCCAACCCCTGAAGCTTACGACTTTGTCCTCAAAACCCTAACTAAAACCTCACAACTCACCCACATCCCTTCTGTTCTTGACCGCCTTGAATCTGTAGAAAAATTCCACACACCCGAATCCATTTTCGCCAATCTGATTAGATTTTATGGCAGTGCCAATCGAATTGGGGATGCCATTGATGTTTTCTACAGGATTCCCAAGTTCAGGTGTGACCCTTCTGCGGTTTCACTCAATTCTTTGTTGTATGTGCTTTGTGGGAGTAGTGAAGGTCTCAAAATGGTGCCCCAGATTTTGTTGAACAGCCGAGCTATGGGGATTAGGCTCGAAGAGTCGAGCTTTCGGATTTTAATCACTGCATTGTTTGGAATTGGAAGGGTTGGGTATGCCATTGAGATAATGAAGTGCATGATCAGAAATGGGTATGATTTGGATGTAAAGATTTGCTCATTGGTGCTGTCATCATTGTGTGAGCAAAAGGGTTTAGCTGGTTTGGAGGTTGTGGGGTTTTTGGAAGAAATGAAGAGAGTTGGGTTTTGTGCTGGGATGATGGACTATTCAAATGTGATTAGGTTTTTGGTGAAACAGGGGAAGGGTTTGGATGCTTTGAGGGTTTTGGGGAAGATGAAAGTGGAGGGAATGAAGCCTGATGTTGTTTGTTATACCATGGTTTTACATGGGGTTATTGCAGATGCGGATTACAAGAATGCGGATAAGGTGTTCGATGAATTACTTGTGTTGGGTTTGGTTCCTGATGTTTATACTTACAATGTGTATATAAATGGGTTGTGTAAGCGGAACAATGTGGAAGCTGGAATAAAGATGATTACTTGTATGGAAGAGTTGGGGTGCAAGCCGAATTTGATTACTTATAACATGTTGTTGAAGGCGTTATGTAAGAATGGGGAGCTGGGTCCGGCAAAGGAGCTTGTGTGTGAGATGACCTTAAAGGGTGTTGGGCTAAACTTGCAGACACATAAAATTATGCTGGATGGTCTATTTTGTAAAGGTGACATTGATGAAGCTTGTATCTTTATGGAGGAAATGTTGGATAAGTTTCTCTGTCATTGTTGTTCGGCATATGATGATGTTATCTTTGGGTTGTGCCAGAGGGGTTTTGTTTGTAAAGCAATGGATTTGCTGCTGAAAATGGTTGACAAGAATGTTGCGCCCGGGGCAAGAGCTTGGGAAGCACTACTTCTTAGCTCAGGAACTGGACCTTGCTTAGTAGAGACTACTTGGACTGGTTTAGTGAACCTAATTGAAGCCATGAGTTATATGACTCCAAAGGGTGCTGGAGTGAGCTTGCCAAAACATAAGAGTATGCTGGATGGTCTCTTTCGTAAACTTGATGTCCACAAAGCTTGTATTTCAACGGAGGAAATGCGACTTCAGTTGTTCTGCATTTCGACAAATGATGAGATAATTCGTGTATTGTGCTGGGGGGGCCTGGTCTGTAAGGTACTGGAATTACTGAAGGAAGTGGTTGACGAGAACATTGCGCTGAGGGCAAGGCCTTGGGAAGCACTAGTCTTTAGCTCAGGATCTCATCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031054 GO:0032296 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 dsrm

Protein Analysis

585

Amino Acids

65.39

Weight (kDa)

8.3

Isoelectric Point (pI)

34.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	238 - 292	1.7e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	253 - 294	3.2e-07	PPR repeat family
PPR_3	PF13812	276 - 328	2.7e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	283 - 332	2.6e-12	PPR repeat family
PPR_3	PF13812	306 - 367	4.9e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	315 - 347	5.2e-07	PPR repeat
PPR_2	PF13041	318 - 367	2.1e-15	PPR repeat family
PPR_1	PF12854	350 - 382	7.4e-11	PPR repeat
PPR_2	PF13041	353 - 400	7.3e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0015288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38420
fragaria_vesca	FvH4_6g10340
malus_domestica	MD04G1169100.v1.1 MD12G1182800.v1.1
prunus_persica	Prupe.6G287300_v2.0.a1
pyrus_communis	pycom04g14980 pycom12g17160
rosa_laevigata	RLG00000024949
rosa_multiflora	Rmu_sc0001521.1_g000049
rosa_roxburghii	Rroxscaffold_6G00418830
rosa_rugosa	Rorug03G0048500 Rorug03G0048700
rosa_samantha	Rh3BG110100 Rh3CG111600 Rh3DG111700
rosa_wichuraiana	Rw3G009060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1074
AccB1I	GGYRCC	1 cut(s)	484
AciI	CCGC	5 cut(s)	286, 425, 896, 911, 997
AclWI	GGATC	1 cut(s)	1753
AcoI	YGGCCR	1 cut(s)	62
AcsI	RAATTY	3 cut(s)	35, 305, 1060
AcuI	CTGAAG	3 cut(s)	234, 1577, 1697
AfaI	GTAC	1 cut(s)	1665
AfiI	CCNNNNNNNGG	3 cut(s)	408, 424, 514
AflII	CTTAAG	1 cut(s)	43
AflIII	ACRYGT	1 cut(s)	1077
AgsI	TTSAA	9 cut(s)	103, 187, 196, 293, 502, 762, 1087, 1466, 1575
AhlI	ACTAGT	1 cut(s)	1729
AjnI	CCWGG	1 cut(s)	1650
AloI	GAACNNNNNNTCC	2 cut(s)	905, 937
Alw26I	GTCTC	4 cut(s)	73, 479, 1427, 1541
AlwI	GGATC	1 cut(s)	1753
AlwNI	CAGNNNCTG	1 cut(s)	1415
Ama87I	CYCGRG	1 cut(s)	1373
AoxI	GGCC	3 cut(s)	62, 1648, 1715
ApeKI	GCWGC	1 cut(s)	1342
ApoI	RAATTY	3 cut(s)	35, 305, 1060
Asp700I	GAANNNNTTC	1 cut(s)	13
AspLEI	GCGC	2 cut(s)	1372, 1705
AspS9I	GGNCC	3 cut(s)	1115, 1418, 1648
AsuC2I	CCSGG	2 cut(s)	1374, 1375
AsuHPI	GGTGA	4 cut(s)	63, 253, 793, 1223
AvaI	CYCGRG	1 cut(s)	1373
AvaII	GGWCC	2 cut(s)	1115, 1418
BaeGI	GKGCMC	1 cut(s)	489
BalI	TGGCCA	1 cut(s)	64
BanI	GGYRCC	1 cut(s)	484
BbvCI	CCTCAGC	1 cut(s)	1706
BbvI	GCAGC	1 cut(s)	1329
BccI	CCATC	3 cut(s)	745, 1187, 1526
BcgI	CGANNNNNNTGC	2 cut(s)	1682, 1716
BciT130I	CCWGG	1 cut(s)	1652
BclI	TGATCA	1 cut(s)	612
BcnI	CCSGG	2 cut(s)	1374, 1375
BcoDI	GTCTC	4 cut(s)	73, 479, 1427, 1541
BcuI	ACTAGT	1 cut(s)	1729
BfaI	CTAG	2 cut(s)	1730, 1756
BfmI	CTRYAG	2 cut(s)	297, 391
BfrI	CTTAAG	1 cut(s)	43
BisI	GCNGC	1 cut(s)	1343
BlsI	GCNGC	1 cut(s)	1344
Bme1390I	CCNGG	3 cut(s)	1374, 1375, 1652
Bme18I	GGWCC	2 cut(s)	1115, 1418
BmeT110I	CYCGRG	1 cut(s)	1373
BmgT120I	GGNCC	3 cut(s)	1115, 1418, 1648
BmiI	GGNNCC	4 cut(s)	486, 951, 1116, 1649
BmrFI	CCNGG	3 cut(s)	1374, 1375, 1652
BmsI	GCATC	3 cut(s)	364, 793, 883
BpmI	CTGGAG	1 cut(s)	1518
Bpu10I	CCTNAGC	3 cut(s)	1408, 1706, 1741
BpuMI	CCSGG	2 cut(s)	1374, 1375
BsaBI	GATNNNNATC	1 cut(s)	551
BsaI	GGTCTC	2 cut(s)	479, 1541
BsaJI	CCNNGG	4 cut(s)	867, 1373, 1374, 1718
BsaXI	ACNNNNNCTCC	6 cut(s)	149, 179, 1118, 1148, 1232, 1262
Bsc4I	CCNNNNNNNGG	3 cut(s)	408, 424, 514
Bse1I	ACTGG	4 cut(s)	65, 1420, 1450, 1671
Bse3DI	GCAATG	2 cut(s)	1338, 1698
Bse8I	GATNNNNATC	1 cut(s)	551
BseBI	CCWGG	1 cut(s)	1652
BseDI	CCNNGG	4 cut(s)	867, 1373, 1374, 1718
BseGI	GGATG	8 cut(s)	174, 267, 379, 640, 753, 808, 1198, 1537
BseJI	GATNNNNATC	1 cut(s)	551
BseLI	CCNNNNNNNGG	3 cut(s)	408, 424, 514
BseMI	GCAATG	2 cut(s)	1338, 1698
BseMII	CTCAG	3 cut(s)	1422, 1697, 1755
BseNI	ACTGG	4 cut(s)	65, 1420, 1450, 1671
BseSI	GKGCMC	1 cut(s)	489
BseXI	GCAGC	1 cut(s)	1329
BseYI	CCCAGC	3 cut(s)	743, 1111, 1641
BshFI	GGCC	3 cut(s)	64, 1650, 1717
BshNI	GGYRCC	1 cut(s)	484
BsiHKCI	CYCGRG	1 cut(s)	1373
BsiSI	CCGG	2 cut(s)	1118, 1374
BslI	CCNNNNNNNGG	3 cut(s)	408, 424, 514
BsmAI	GTCTC	4 cut(s)	73, 479, 1427, 1541
BsmI	GAATGC	1 cut(s)	913
BsnI	GGCC	3 cut(s)	64, 1650, 1717
Bso31I	GGTCTC	2 cut(s)	479, 1541
BsoBI	CYCGRG	1 cut(s)	1373
Bsp1286I	GDGCHC	1 cut(s)	489
Bsp143I	GATC	2 cut(s)	612, 1745
Bsp19I	CCATGG	1 cut(s)	867
BspACI	CCGC	5 cut(s)	286, 425, 896, 911, 997
BspANI	GGCC	3 cut(s)	64, 1650, 1717
BspCNI	CTCAG	3 cut(s)	1421, 1698, 1754
BspLI	GGNNCC	4 cut(s)	486, 951, 1116, 1649
BspPI	GGATC	1 cut(s)	1753
BspT107I	GGYRCC	1 cut(s)	484
BspTI	CTTAAG	1 cut(s)	43
BspTNI	GGTCTC	2 cut(s)	479, 1541
BsrDI	GCAATG	2 cut(s)	1338, 1698
BsrI	ACTGG	4 cut(s)	65, 1420, 1450, 1671
BssECI	CCNNGG	4 cut(s)	867, 1373, 1374, 1718
BssMI	GATC	2 cut(s)	612, 1745
BssT1I	CCWWGG	2 cut(s)	867, 1718
Bst2UI	CCWGG	1 cut(s)	1652
Bst6I	CTCTTC	5 cut(s)	19, 104, 525, 719, 1035
BstAFI	CTTAAG	1 cut(s)	43
BstC8I	GCNNGC	2 cut(s)	1055, 1508
BstDEI	CTNAG	5 cut(s)	1403, 1408, 1426, 1706, 1741
BstDSI	CCRYGG	1 cut(s)	867
BstF5I	GGATG	8 cut(s)	174, 267, 379, 640, 753, 808, 1198, 1537
BstHHI	GCGC	2 cut(s)	1372, 1705
BstKTI	GATC	2 cut(s)	615, 1748
BstMAI	GTCTC	4 cut(s)	73, 479, 1427, 1541
BstMBI	GATC	2 cut(s)	612, 1745
BstMWI	GCNNNNNNNGC	5 cut(s)	1168, 1376, 1391, 1647, 1709
BstNI	CCWGG	1 cut(s)	1652
BstNSI	RCATGY	1 cut(s)	1081
BstSCI	CCNGG	3 cut(s)	1372, 1373, 1650
BstSFI	CTRYAG	2 cut(s)	297, 391
BstSLI	GKGCMC	1 cut(s)	489
BstV1I	GCAGC	1 cut(s)	1329
BstX2I	RGATCY	1 cut(s)	1745
BstYI	RGATCY	1 cut(s)	1745
BsuRI	GGCC	3 cut(s)	64, 1650, 1717
BtgI	CCRYGG	1 cut(s)	867
BtsCI	GGATG	8 cut(s)	174, 267, 379, 640, 753, 808, 1198, 1537
BtsI	GCAGTG	3 cut(s)	116, 361, 555
BtsIMutI	CAGTG	3 cut(s)	116, 361, 555
Cac8I	GCNNGC	2 cut(s)	1055, 1508
CaiI	CAGNNNCTG	1 cut(s)	1415
CfoI	GCGC	2 cut(s)	1372, 1705
Cfr13I	GGNCC	3 cut(s)	1115, 1418, 1648
Cfr9I	CCCGGG	1 cut(s)	1373
Csp6I	GTAC	1 cut(s)	1664
CspCI	CAANNNNNGTGG	2 cut(s)	1547, 1582
CviAII	CATG	5 cut(s)	610, 868, 878, 1078, 1471
CviQI	GTAC	1 cut(s)	1664
DdeI	CTNAG	5 cut(s)	1403, 1408, 1426, 1706, 1741
DpnI	GATC	2 cut(s)	614, 1747
DpnII	GATC	2 cut(s)	612, 1745
EaeI	YGGCCR	1 cut(s)	62
Eam1104I	CTCTTC	5 cut(s)	19, 104, 525, 719, 1035
EarI	CTCTTC	5 cut(s)	19, 104, 525, 719, 1035
Eco130I	CCWWGG	2 cut(s)	867, 1718
Eco147I	AGGCCT	1 cut(s)	1717
Eco31I	GGTCTC	2 cut(s)	479, 1541
Eco47I	GGWCC	2 cut(s)	1115, 1418
Eco57I	CTGAAG	3 cut(s)	234, 1577, 1697
Eco88I	CYCGRG	1 cut(s)	1373
EcoO109I	RGGNCCY	1 cut(s)	1648
EcoRII	CCWGG	1 cut(s)	1650
EcoT14I	CCWWGG	2 cut(s)	867, 1718
ErhI	CCWWGG	2 cut(s)	867, 1718
FaeI	CATG	5 cut(s)	613, 871, 881, 1081, 1474
FalI	AAGNNNNNCTT	2 cut(s)	1383, 1415
FatI	CATG	5 cut(s)	609, 867, 877, 1077, 1470
FauNDI	CATATG	1 cut(s)	1282
FbaI	TGATCA	1 cut(s)	612
Fnu4HI	GCNGC	1 cut(s)	1343
FokI	GGATG	8 cut(s)	161, 254, 386, 647, 760, 815, 1205, 1544
Fsp4HI	GCNGC	1 cut(s)	1343
FspBI	CTAG	2 cut(s)	1730, 1756
GlaI	GCGC	2 cut(s)	1371, 1704
GluI	GCNGC	1 cut(s)	1343
GsaI	CCCAGC	3 cut(s)	747, 1115, 1645
GsuI	CTGGAG	1 cut(s)	1518
HaeIII	GGCC	3 cut(s)	64, 1650, 1717
HapII	CCGG	2 cut(s)	1118, 1374
HhaI	GCGC	2 cut(s)	1372, 1705
Hin1II	CATG	5 cut(s)	613, 871, 881, 1081, 1474
Hin6I	GCGC	2 cut(s)	1370, 1703
HinP1I	GCGC	2 cut(s)	1370, 1703
HincII	GTYRAC	2 cut(s)	1357, 1690
HindII	GTYRAC	2 cut(s)	1357, 1690
HindIII	AAGCTT	3 cut(s)	216, 1224, 1563
HinfI	GANTC	5 cut(s)	293, 320, 397, 533, 1483
HpaII	CCGG	2 cut(s)	1118, 1374
HphI	GGTGA	4 cut(s)	63, 253, 793, 1223
Hpy166II	GTNNAC	5 cut(s)	1357, 1456, 1547, 1558, 1690
Hpy188I	TCNGA	5 cut(s)	8, 202, 339, 546, 617
Hpy188III	TCNNGA	4 cut(s)	281, 953, 1410, 1743
Hpy8I	GTNNAC	5 cut(s)	1357, 1456, 1547, 1558, 1690
HpyAV	CCTTC	9 cut(s)	170, 202, 282, 429, 464, 570, 787, 1081, 1672
HpyCH4V	TGCA	7 cut(s)	121, 560, 609, 890, 1053, 1171, 1605
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1168, 1376, 1391, 1647, 1709
HpyF3I	CTNAG	5 cut(s)	1403, 1408, 1426, 1706, 1741
Hsp92II	CATG	5 cut(s)	613, 871, 881, 1081, 1474
HspAI	GCGC	2 cut(s)	1370, 1703
Ksp22I	TGATCA	1 cut(s)	612
Kzo9I	GATC	2 cut(s)	612, 1745
LmnI	GCTCC	2 cut(s)	1108, 1126
Lsp1109I	GCAGC	1 cut(s)	1329
LweI	GCATC	3 cut(s)	364, 793, 883
MaeI	CTAG	2 cut(s)	1730, 1756
MaeIII	GTNAC	2 cut(s)	413, 1211
MalI	GATC	2 cut(s)	614, 1747
MboI	GATC	2 cut(s)	612, 1745
MboII	GAAGA	8 cut(s)	6, 31, 91, 542, 728, 736, 835, 1052
MflI	RGATCY	1 cut(s)	1745
MhlI	GDGCHC	1 cut(s)	489
MlsI	TGGCCA	1 cut(s)	64
MluNI	TGGCCA	1 cut(s)	64
MlyI	GAGTC	2 cut(s)	542, 1477
MmeI	TCCRAC	1 cut(s)	1230
Mox20I	TGGCCA	1 cut(s)	64
MroXI	GAANNNNTTC	1 cut(s)	13
MscI	TGGCCA	1 cut(s)	64
MseI	TTAA	3 cut(s)	44, 551, 1148
MslI	CAYNNNNRTG	1 cut(s)	667
Msp20I	TGGCCA	1 cut(s)	64
MspCI	CTTAAG	1 cut(s)	43
MspI	CCGG	2 cut(s)	1118, 1374
MspR9I	CCNGG	3 cut(s)	1374, 1375, 1652
Mva1269I	GAATGC	1 cut(s)	913
MvaI	CCWGG	1 cut(s)	1652
MwoI	GCNNNNNNNGC	5 cut(s)	1168, 1376, 1391, 1647, 1709
NciI	CCSGG	2 cut(s)	1374, 1375
NcoI	CCATGG	1 cut(s)	867
NdeI	CATATG	1 cut(s)	1282
NdeII	GATC	2 cut(s)	612, 1745
NlaIII	CATG	5 cut(s)	613, 871, 881, 1081, 1474
NlaIV	GGNNCC	4 cut(s)	486, 951, 1116, 1649
NmeAIII	GCCGAG	1 cut(s)	533
NmuCI	GTSAC	2 cut(s)	413, 1211
NspI	RCATGY	1 cut(s)	1081
PceI	AGGCCT	1 cut(s)	1717
PciI	ACATGT	1 cut(s)	1077
PctI	GAATGC	1 cut(s)	913
PdmI	GAANNNNTTC	1 cut(s)	13
PfeI	GAWTC	3 cut(s)	293, 320, 397
PflFI	GACNNNGTC	1 cut(s)	227
PkrI	GCNGC	1 cut(s)	1344
PleI	GAGTC	2 cut(s)	541, 1477
PpsI	GAGTC	2 cut(s)	541, 1477
PscI	ACATGT	1 cut(s)	1077
PsiI	TTATAA	1 cut(s)	1074
Psp6I	CCWGG	1 cut(s)	1650
PspFI	CCCAGC	3 cut(s)	743, 1111, 1641
PspGI	CCWGG	1 cut(s)	1650
PspN4I	GGNNCC	4 cut(s)	486, 951, 1116, 1649
PspPI	GGNCC	3 cut(s)	1115, 1418, 1648
PstNI	CAGNNNCTG	1 cut(s)	1415
PsuI	RGATCY	1 cut(s)	1745
PsyI	GACNNNGTC	1 cut(s)	227
RsaI	GTAC	1 cut(s)	1665
RsaNI	GTAC	1 cut(s)	1664
RseI	CAYNNNNRTG	1 cut(s)	667
SaqAI	TTAA	3 cut(s)	44, 551, 1148
SatI	GCNGC	1 cut(s)	1343
Sau3AI	GATC	2 cut(s)	612, 1745
Sau96I	GGNCC	3 cut(s)	1115, 1418, 1648
SchI	GAGTC	2 cut(s)	542, 1477
ScrFI	CCNGG	3 cut(s)	1374, 1375, 1652
SduI	GDGCHC	1 cut(s)	489
SfaNI	GCATC	3 cut(s)	364, 793, 883
SfcI	CTRYAG	2 cut(s)	297, 391
SinI	GGWCC	2 cut(s)	1115, 1418
SmaI	CCCGGG	1 cut(s)	1375
SmiMI	CAYNNNNRTG	1 cut(s)	667
SmlI	CTYRAG	1 cut(s)	43
SmoI	CTYRAG	1 cut(s)	43
SpeI	ACTAGT	1 cut(s)	1729
SseBI	AGGCCT	1 cut(s)	1717
SsiI	CCGC	5 cut(s)	286, 425, 896, 911, 997
SspMI	CTAG	2 cut(s)	1730, 1756
StuI	AGGCCT	1 cut(s)	1717
StyD4I	CCNGG	3 cut(s)	1372, 1373, 1650
StyI	CCWWGG	2 cut(s)	867, 1718
TaqI	TCGA	5 cut(s)	364, 528, 536, 924, 1610
TfiI	GAWTC	3 cut(s)	293, 320, 397
Tru1I	TTAA	3 cut(s)	44, 551, 1148
Tru9I	TTAA	3 cut(s)	44, 551, 1148
TscAI	CASTG	3 cut(s)	123, 361, 562
TseFI	GTSAC	2 cut(s)	413, 1211
TseI	GCWGC	1 cut(s)	1342
Tsp45I	GTSAC	2 cut(s)	413, 1211
TspDTI	ATGAA	6 cut(s)	617, 737, 842, 857, 942, 1236
TspGWI	ACGGA	1 cut(s)	1592
TspMI	CCCGGG	1 cut(s)	1373
TspRI	CASTG	3 cut(s)	123, 361, 562
Tth111I	GACNNNGTC	1 cut(s)	227
Vha464I	CTTAAG	1 cut(s)	43
VpaK11BI	GGWCC	2 cut(s)	1115, 1418
XapI	RAATTY	3 cut(s)	35, 305, 1060
XceI	RCATGY	1 cut(s)	1081
XmaI	CCCGGG	1 cut(s)	1373
XmnI	GAANNNNTTC	1 cut(s)	13
XspI	CTAG	2 cut(s)	1730, 1756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.