Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0009405

Physical Location & Seq

Genomic Coordinates Reverse (-)

23017533 .. 23022201

Gene Structure 4669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g21950.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGTGGCTCGGAGCTTCCAGGTTCACCACAAGGACTCCACTTTCTCCGTTGACTACGACACCGACGACGGCCTTGAAGTCCTCAAATTTCAACTCTTCTCCCTCACCTCCGTTCCCCCCGACGAGCAAAAGTTAATTGGATTCGATGGAGATTCCGTTGTTTCGGACGATTCGGACCTCGTTTCGATTTGCGAGAAGCTCCGATTGGTTTCGATCAGCGAAGAACAACAACAGCAAGAAGAATCAGCGGCTCAGAACGACGAATTGCTGAAATCGGACGAGGAATTGGCTAGAATGTTGCAGCAGTACGCTGCCCCTGAAGATGATGGAAAATTCGAGCAAAAACTGCGGCCTTATGTCAGTCAAGTTCTTATGTACGAGGACCCGGTGCGCCAGGAGGCTGCTCGGAAAACAGTCCCTATAGAAGAGCTTGAGGAGAAGGCATTGGTCAGTTTGGCCAAGGAGGGGAACTTAACTCCGTCAAAAAATGAGCAAGATCATGCTTTCCTGCTGCAGCTACTTTTTTGGTTCAAACAGTCTTTCAGTTGGGTTAACGCACCTGCCTGTGATAGTTGTGGCAATAACACCGTAAATAGTGGCATGGCTAATGCAATTCCTTCAGAAATCCGATATGGAGCTTCTCGAGTTGAGATCTATAGATGCAATATTTGTCCTACGGTGACTCGTTTCCCACGCTACAATGATCCACTAAAGCTTGTGGAAACAAGAAGAGGGCGTTGTGGGGAATGGGCCAATTGCTTTACGCTTTATTGCCGAGCTTTTGGATATGAATCCCGTCTTATCTTGGATTTCACGGATCATGTTTGGACAGAGTGCTTCTCACAATCTTTGGGAAGATGGATGCATCTTGATCCTTGTGAAGCAGTGTATGATAAACCCCTGTTATATGAAAGCGGGTGGAACAAGAAATTGAATTATGTAATTGCCATCACAAAAGATGGTGTTTGTGATGTAACCAAACGCTATACGAGGAAGTGGCATGAGGTACTTTCTCGACGTAACATCATTACAGAGCGTGCATTGTCAGCTGTGCTTGCTAATATAACAAAAGATTGTCGAAGAGGGTTTACTTCTCAAGTACTTTCTGTACTTGAAGAGCGTGATGAGAAGGAAAGACAAGAACTTGAAAGAGGTTTGCATTCTACAGACAATGACTCAACCTCATTACCTGGGAGACGAAGTGGGGACAAGGAATGGCGCAAGTCAAGATTAGAATGTGGTTCTGATGAGAGTTGCTCCTTGAGTGGTTCTTCTTGTCCAGTTCGTTCATGCTTTGACGAGCACGTGACCAAAATTCATAATGCATTTCTTCCAATTCTTTCAAAGCTTGTTGAGGAAGAATTTCCAAAGTCAAGGGCCGTTGAAGTACTTGAGACTCTAAAAGGCATTCTCATGGATCTTAAGAAATCACCTTTTAAAACAAGGAGGACCACAATCGATTCAGTTTCTAATATCAATCAATCACCTGTTCATCAGTTGCTGCCCTCTTTCACTGAGTTACTTAATGCTCTTTCGATGAGTGTTATGGTAGATGGTGATGGGAAGGTCGACATTTCTCTGTCTGGAAGTGCTGTTAAAACCTCTTTGGCACTACCTGTTGCATTGGATGCTTTGGACGACACAATCAATAATCTTAACAGTTGTGATAACTTTGTTGAAAAGTCTCTTTGCTTGCCTCTTTTGAAGCTAAACAGAATACATTCTGGTTTAGTCCTTGCAAGTGGGGAAGAAATTCCCTTTGGAATTGCCACATCAGCGTTTGATGGGATACGCATGTCTAAGTGGGAAGAACCAAATGGTGCACAAGGTTGCTGGATCATGTATAAAGTATCAGAGAACCAGATGCACGAACTTGTGGCGTATGAGTTAATGTCAGCCAACGATGCACCGGAAAGGGATCCCATGGATTGGGTTGTTGAAGGAAGCAATGATGAGGGATCAAGCTGGCATCTGTTGGATACACGAACTTCTCAAGTATTTGATAGTCGTTTTCAGCGTAAAACATTTCAGATTGCTTCTCAAGGTTTCCTCGCAAATGCTTTCAGGTTTAGATTTTTGGCCGTTAAAGACGTCCAATCAAATTCGCGGCTGCAATTAGGTAGCATTGACCTCTATTCTAGAAGCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000224 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006515 GO:0006516 GO:0006517 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009636 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0010035 GO:0010188 GO:0010193 GO:0014070 GO:0016787 GO:0016810 GO:0016811 GO:0019538 GO:0030163 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0051603 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Rad4 Transglut_core

Protein Analysis

717

Amino Acids

81.01

Weight (kDa)

5.17

Isoelectric Point (pI)

57.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009405)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49570
fragaria_vesca	FvH4_6g03130 FvH4_6g03130
malus_domestica	MD12G1238800.v1.1
prunus_persica	Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1
pyrus_communis	pycom12g21950
rosa_chinensis	RchiOBHm_Chr3g0451381
rosa_laevigata	RLG00000025664
rosa_multiflora	Rmu_sc0002575.1_g000005 Rmu_sc0012229.1_g000001
rosa_roxburghii	Rroxscaffold_164G00436540 Rroxscaffold_6G00428800
rosa_rugosa	Rorug02G0633400
rosa_samantha	Rh3AG036400 Rh3BG037000 Rh3CG035600 Rh3DG036500
rosa_wichuraiana	Rw3G002680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	568
AatII	GACGTC	1 cut(s)	2094
Acc36I	ACCTGC	1 cut(s)	568
AccB7I	CCANNNNNTGG	1 cut(s)	1929
AccI	GTMKAC	1 cut(s)	1569
AccII	CGCG	1 cut(s)	2107
AciI	CCGC	4 cut(s)	248, 349, 915, 2107
AclWI	GGATC	8 cut(s)	698, 825, 866, 1425, 1844, 1913, 1926, 1966
AcoI	YGGCCR	2 cut(s)	456, 2079
AcsI	RAATTY	6 cut(s)	86, 332, 1314, 1361, 1752, 2101
AcuI	CTGAAG	2 cut(s)	339, 603
AcvI	CACGTG	1 cut(s)	1306
AcyI	GRCGYC	1 cut(s)	2091
AfaI	GTAC	6 cut(s)	308, 377, 1008, 1101, 1110, 1389
AfiI	CCNNNNNNNGG	2 cut(s)	465, 1929
AflII	CTTAAG	1 cut(s)	1421
AjnI	CCWGG	3 cut(s)	18, 393, 1189
AjuI	GAANNNNNNNTTGG	4 cut(s)	188, 220, 1743, 1775
Alw21I	GWGCWC	2 cut(s)	1305, 1825
Alw26I	GTCTC	3 cut(s)	1189, 1388, 1689
Alw44I	GTGCAC	1 cut(s)	1821
AlwI	GGATC	8 cut(s)	698, 825, 866, 1425, 1844, 1913, 1926, 1966
AlwNI	CAGNNNCTG	1 cut(s)	1501
Ama87I	CYCGRG	1 cut(s)	642
AoxI	GGCC	6 cut(s)	70, 350, 456, 750, 1377, 2079
ApaLI	GTGCAC	1 cut(s)	1821
ApeKI	GCWGC	7 cut(s)	301, 311, 401, 511, 514, 1501, 2110
ApoI	RAATTY	6 cut(s)	86, 332, 1314, 1361, 1752, 2101
Asp700I	GAANNNNTTC	3 cut(s)	1362, 1720, 1752
AspLEI	GCGC	2 cut(s)	393, 1221
AspS9I	GGNCC	5 cut(s)	175, 382, 750, 1377, 1449
AsuC2I	CCSGG	1 cut(s)	386
AsuHPI	GGTGA	6 cut(s)	17, 97, 691, 1422, 1476, 1568
AvaI	CYCGRG	1 cut(s)	642
AvaII	GGWCC	3 cut(s)	175, 382, 1449
BaeGI	GKGCMC	1 cut(s)	1825
BaeI	ACNNNNGTAYC	2 cut(s)	1781, 1814
BalI	TGGCCA	1 cut(s)	458
BamHI	GGATCC	1 cut(s)	1918
BarI	GAAGNNNNNNTAC	2 cut(s)	1072, 1104
BbrPI	CACGTG	1 cut(s)	1306
Bbv12I	GWGCWC	2 cut(s)	1305, 1825
BbvI	GCAGC	7 cut(s)	298, 313, 388, 498, 526, 1488, 2097
BccI	CCATC	8 cut(s)	140, 320, 852, 953, 956, 1547, 1553, 1778
BceAI	ACGGC	3 cut(s)	85, 1364, 2066
BciT130I	CCWGG	3 cut(s)	20, 395, 1191
BciVI	GTATCC	2 cut(s)	1782, 1972
BcnI	CCSGG	1 cut(s)	386
BcoDI	GTCTC	3 cut(s)	1189, 1388, 1689
BfaI	CTAG	2 cut(s)	291, 2139
BfmI	CTRYAG	4 cut(s)	420, 512, 655, 1164
BfrI	CTTAAG	1 cut(s)	1421
BfuAI	ACCTGC	1 cut(s)	568
BfuI	GTATCC	2 cut(s)	1782, 1972
BglII	AGATCT	1 cut(s)	651
BmcAI	AGTACT	2 cut(s)	1101, 1389
Bme1390I	CCNGG	4 cut(s)	20, 386, 395, 1191
Bme18I	GGWCC	3 cut(s)	175, 382, 1449
BmeT110I	CYCGRG	1 cut(s)	642
BmgT120I	GGNCC	5 cut(s)	175, 382, 750, 1377, 1449
BmiI	GGNNCC	2 cut(s)	384, 1920
BmrFI	CCNGG	4 cut(s)	20, 386, 395, 1191
BmsI	GCATC	7 cut(s)	650, 852, 874, 1618, 1854, 1894, 1978
BplI	GAGNNNNNCTC	4 cut(s)	824, 856, 1241, 1273
BpuEI	CTTGAG	6 cut(s)	452, 1080, 1282, 1412, 1977, 2025
BpuMI	CCSGG	1 cut(s)	386
Bsa29I	ATCGAT	1 cut(s)	1458
BsaAI	YACGTR	1 cut(s)	1306
BsaBI	GATNNNNATC	1 cut(s)	790
BsaHI	GRCGYC	1 cut(s)	2091
BsaJI	CCNNGG	3 cut(s)	459, 1190, 1923
BsaWI	WCCGGW	1 cut(s)	1909
BsaXI	ACNNNNNCTCC	6 cut(s)	20, 50, 141, 171, 1186, 1216
Bsc4I	CCNNNNNNNGG	2 cut(s)	465, 1929
Bse1I	ACTGG	1 cut(s)	1280
Bse3DI	GCAATG	1 cut(s)	1954
Bse8I	GATNNNNATC	1 cut(s)	790
BseBI	CCWGG	3 cut(s)	20, 395, 1191
BseCI	ATCGAT	1 cut(s)	1458
BseDI	CCNNGG	3 cut(s)	459, 1190, 1923
BseGI	GGATG	2 cut(s)	867, 1633
BseJI	GATNNNNATC	1 cut(s)	790
BseLI	CCNNNNNNNGG	2 cut(s)	465, 1929
BseMI	GCAATG	1 cut(s)	1954
BseMII	CTCAG	2 cut(s)	266, 1506
BseNI	ACTGG	1 cut(s)	1280
BseRI	GAGGAG	1 cut(s)	449
BseSI	GKGCMC	1 cut(s)	1825
BseXI	GCAGC	7 cut(s)	298, 313, 388, 498, 526, 1488, 2097
Bsh1236I	CGCG	1 cut(s)	2107
BshFI	GGCC	6 cut(s)	72, 352, 458, 752, 1379, 2081
BshVI	ATCGAT	1 cut(s)	1458
BsiHKAI	GWGCWC	2 cut(s)	1305, 1825
BsiHKCI	CYCGRG	1 cut(s)	642
BsiSI	CCGG	2 cut(s)	386, 1910
BslFI	GGGAC	2 cut(s)	401, 1220
BslI	CCNNNNNNNGG	2 cut(s)	465, 1929
BsmAI	GTCTC	3 cut(s)	1189, 1388, 1689
BsmBI	CGTCTC	1 cut(s)	1189
BsmFI	GGGAC	2 cut(s)	401, 1220
BsmI	GAATGC	2 cut(s)	1159, 1407
BsnI	GGCC	6 cut(s)	72, 352, 458, 752, 1379, 2081
BsoBI	CYCGRG	1 cut(s)	642
Bsp1286I	GDGCHC	2 cut(s)	1305, 1825
Bsp19I	CCATGG	1 cut(s)	1923
BspACI	CCGC	4 cut(s)	248, 349, 915, 2107
BspANI	GGCC	6 cut(s)	72, 352, 458, 752, 1379, 2081
BspCNI	CTCAG	2 cut(s)	265, 1507
BspDI	ATCGAT	1 cut(s)	1458
BspFNI	CGCG	1 cut(s)	2107
BspLI	GGNNCC	2 cut(s)	384, 1920
BspMAI	CTGCAG	1 cut(s)	516
BspMI	ACCTGC	1 cut(s)	568
BspPI	GGATC	8 cut(s)	698, 825, 866, 1425, 1844, 1913, 1926, 1966
BspQI	GCTCTTC	2 cut(s)	420, 1110
BspTI	CTTAAG	1 cut(s)	1421
BsrDI	GCAATG	1 cut(s)	1954
BsrI	ACTGG	1 cut(s)	1280
BssECI	CCNNGG	3 cut(s)	459, 1190, 1923
BssNI	GRCGYC	1 cut(s)	2091
BssT1I	CCWWGG	2 cut(s)	459, 1923
Bst2UI	CCWGG	3 cut(s)	20, 395, 1191
Bst4CI	ACNGT	5 cut(s)	415, 537, 589, 679, 1661
Bst6I	CTCTTC	5 cut(s)	101, 420, 724, 1075, 1110
BstACI	GRCGYC	1 cut(s)	2091
BstAFI	CTTAAG	1 cut(s)	1421
BstAPI	GCANNNNNTGC	2 cut(s)	346, 1628
BstBAI	YACGTR	1 cut(s)	1306
BstC8I	GCNNGC	4 cut(s)	1038, 1056, 1694, 1967
BstDEI	CTNAG	3 cut(s)	252, 1515, 1800
BstDSI	CCRYGG	1 cut(s)	1923
BstF5I	GGATG	2 cut(s)	867, 1633
BstFNI	CGCG	1 cut(s)	2107
BstHHI	GCGC	2 cut(s)	393, 1221
BstMAI	GTCTC	3 cut(s)	1189, 1388, 1689
BstMWI	GCNNNNNNNGC	6 cut(s)	346, 1046, 1055, 1628, 1775, 1904
BstNI	CCWGG	3 cut(s)	20, 395, 1191
BstNSI	RCATGY	1 cut(s)	1798
BstSCI	CCNGG	4 cut(s)	18, 384, 393, 1189
BstSFI	CTRYAG	4 cut(s)	420, 512, 655, 1164
BstSLI	GKGCMC	1 cut(s)	1825
BstUI	CGCG	1 cut(s)	2107
BstV1I	GCAGC	7 cut(s)	298, 313, 388, 498, 526, 1488, 2097
BstX2I	RGATCY	3 cut(s)	651, 1417, 1918
BstYI	RGATCY	3 cut(s)	651, 1417, 1918
Bsu15I	ATCGAT	1 cut(s)	1458
BsuI	GTATCC	2 cut(s)	1782, 1972
BsuRI	GGCC	6 cut(s)	72, 352, 458, 752, 1379, 2081
BsuTUI	ATCGAT	1 cut(s)	1458
BtgI	CCRYGG	1 cut(s)	1923
BtsCI	GGATG	2 cut(s)	867, 1633
BtsI	GCAGTG	1 cut(s)	891
BtsIMutI	CAGTG	2 cut(s)	891, 1512
BveI	ACCTGC	1 cut(s)	568
Cac8I	GCNNGC	4 cut(s)	1038, 1056, 1694, 1967
CaiI	CAGNNNCTG	1 cut(s)	1501
CfoI	GCGC	2 cut(s)	393, 1221
Cfr13I	GGNCC	5 cut(s)	175, 382, 750, 1377, 1449
ClaI	ATCGAT	1 cut(s)	1458
Csp6I	GTAC	6 cut(s)	307, 376, 1007, 1100, 1109, 1388
CviAII	CATG	9 cut(s)	500, 601, 821, 1001, 1290, 1414, 1795, 1840, 1924
CviQI	GTAC	6 cut(s)	307, 376, 1007, 1100, 1109, 1388
DdeI	CTNAG	3 cut(s)	252, 1515, 1800
DraI	TTTAAA	1 cut(s)	1438
EaeI	YGGCCR	2 cut(s)	456, 2079
Eam1104I	CTCTTC	5 cut(s)	101, 420, 724, 1075, 1110
EarI	CTCTTC	5 cut(s)	101, 420, 724, 1075, 1110
Eco130I	CCWWGG	2 cut(s)	459, 1923
Eco47I	GGWCC	3 cut(s)	175, 382, 1449
Eco57I	CTGAAG	2 cut(s)	339, 603
Eco72I	CACGTG	1 cut(s)	1306
Eco88I	CYCGRG	1 cut(s)	642
EcoO109I	RGGNCCY	1 cut(s)	382
EcoRII	CCWGG	3 cut(s)	18, 393, 1189
EcoT14I	CCWWGG	2 cut(s)	459, 1923
EcoT22I	ATGCAT	2 cut(s)	867, 1327
ErhI	CCWWGG	2 cut(s)	459, 1923
Esp3I	CGTCTC	1 cut(s)	1189
FaeI	CATG	9 cut(s)	503, 604, 824, 1004, 1293, 1417, 1798, 1843, 1927
FaqI	GGGAC	2 cut(s)	401, 1220
FatI	CATG	9 cut(s)	499, 600, 820, 1000, 1289, 1413, 1794, 1839, 1923
FauI	CCCGC	1 cut(s)	908
FblI	GTMKAC	1 cut(s)	1569
FokI	GGATG	2 cut(s)	874, 1640
FspBI	CTAG	2 cut(s)	291, 2139
GlaI	GCGC	2 cut(s)	392, 1220
HaeIII	GGCC	6 cut(s)	72, 352, 458, 752, 1379, 2081
HapII	CCGG	2 cut(s)	386, 1910
HhaI	GCGC	2 cut(s)	393, 1221
Hin1I	GRCGYC	1 cut(s)	2091
Hin1II	CATG	9 cut(s)	503, 604, 824, 1004, 1293, 1417, 1798, 1843, 1927
Hin6I	GCGC	2 cut(s)	391, 1219
HinP1I	GCGC	2 cut(s)	391, 1219
HincII	GTYRAC	3 cut(s)	52, 553, 1570
HindII	GTYRAC	3 cut(s)	52, 553, 1570
HindIII	AAGCTT	2 cut(s)	713, 1346
HpaI	GTTAAC	1 cut(s)	553
HpaII	CCGG	2 cut(s)	386, 1910
HphI	GGTGA	6 cut(s)	17, 97, 691, 1422, 1476, 1568
Hpy166II	GTNNAC	6 cut(s)	25, 52, 553, 1089, 1570, 1823
Hpy188III	TCNNGA	6 cut(s)	642, 869, 1014, 1227, 1584, 2139
Hpy8I	GTNNAC	6 cut(s)	25, 52, 553, 1089, 1570, 1823
Hpy99I	CGWCG	5 cut(s)	68, 71, 125, 263, 1020
HpyCH4III	ACNGT	5 cut(s)	415, 537, 589, 679, 1661
HpyCH4IV	ACGT	3 cut(s)	1018, 1305, 2091
HpyF10VI	GCNNNNNNNGC	6 cut(s)	346, 1046, 1055, 1628, 1775, 1904
HpyF3I	CTNAG	3 cut(s)	252, 1515, 1800
HpySE526I	ACGT	3 cut(s)	1018, 1305, 2091
Hsp92I	GRCGYC	1 cut(s)	2091
Hsp92II	CATG	9 cut(s)	503, 604, 824, 1004, 1293, 1417, 1798, 1843, 1927
HspAI	GCGC	2 cut(s)	391, 1219
KspAI	GTTAAC	1 cut(s)	553
LguI	GCTCTTC	2 cut(s)	420, 1110
LmnI	GCTCC	4 cut(s)	12, 204, 635, 1262
Lsp1109I	GCAGC	7 cut(s)	298, 313, 388, 498, 526, 1488, 2097
LweI	GCATC	7 cut(s)	650, 852, 874, 1618, 1854, 1894, 1978
MaeI	CTAG	2 cut(s)	291, 2139
MaeII	ACGT	3 cut(s)	1018, 1305, 2091
MaeIII	GTNAC	5 cut(s)	679, 973, 1019, 1306, 1518
MfeI	CAATTG	1 cut(s)	754
MflI	RGATCY	3 cut(s)	651, 1417, 1918
MhlI	GDGCHC	2 cut(s)	1305, 1825
MlsI	TGGCCA	1 cut(s)	458
MluNI	TGGCCA	1 cut(s)	458
MlyI	GAGTC	4 cut(s)	29, 676, 1169, 1390
MmeI	TCCRAC	1 cut(s)	1956
Mox20I	TGGCCA	1 cut(s)	458
Mph1103I	ATGCAT	2 cut(s)	867, 1327
MroXI	GAANNNNTTC	3 cut(s)	1362, 1720, 1752
MscI	TGGCCA	1 cut(s)	458
MslI	CAYNNNNRTG	1 cut(s)	1412
Msp20I	TGGCCA	1 cut(s)	458
MspA1I	CMGCKG	2 cut(s)	248, 1049
MspCI	CTTAAG	1 cut(s)	1421
MspI	CCGG	2 cut(s)	386, 1910
MspR9I	CCNGG	4 cut(s)	20, 386, 395, 1191
MunI	CAATTG	1 cut(s)	754
Mva1269I	GAATGC	2 cut(s)	1159, 1407
MvaI	CCWGG	3 cut(s)	20, 395, 1191
MvnI	CGCG	1 cut(s)	2107
MwoI	GCNNNNNNNGC	6 cut(s)	346, 1046, 1055, 1628, 1775, 1904
NciI	CCSGG	1 cut(s)	386
NcoI	CCATGG	1 cut(s)	1923
NlaIII	CATG	9 cut(s)	503, 604, 824, 1004, 1293, 1417, 1798, 1843, 1927
NlaIV	GGNNCC	2 cut(s)	384, 1920
NmeAIII	GCCGAG	1 cut(s)	800
NmuCI	GTSAC	2 cut(s)	679, 1306
NsiI	ATGCAT	2 cut(s)	867, 1327
NspI	RCATGY	1 cut(s)	1798
PaeR7I	CTCGAG	1 cut(s)	642
PaqCI	CACCTGC	1 cut(s)	568
PciSI	GCTCTTC	2 cut(s)	420, 1110
PcsI	WCGNNNNNNNCGW	2 cut(s)	63, 2014
PctI	GAATGC	2 cut(s)	1159, 1407
PdmI	GAANNNNTTC	3 cut(s)	1362, 1720, 1752
PfeI	GAWTC	6 cut(s)	141, 152, 170, 242, 791, 1460
PflMI	CCANNNNNTGG	1 cut(s)	1929
PleI	GAGTC	4 cut(s)	29, 676, 1169, 1390
PmaCI	CACGTG	1 cut(s)	1306
PmlI	CACGTG	1 cut(s)	1306
PpsI	GAGTC	4 cut(s)	29, 676, 1169, 1390
Ppu21I	YACGTR	1 cut(s)	1306
PpuMI	RGGWCCY	1 cut(s)	382
Psp5II	RGGWCCY	1 cut(s)	382
Psp6I	CCWGG	3 cut(s)	18, 393, 1189
PspCI	CACGTG	1 cut(s)	1306
PspGI	CCWGG	3 cut(s)	18, 393, 1189
PspN4I	GGNNCC	2 cut(s)	384, 1920
PspPI	GGNCC	5 cut(s)	175, 382, 750, 1377, 1449
PspPPI	RGGWCCY	1 cut(s)	382
PstI	CTGCAG	1 cut(s)	516
PstNI	CAGNNNCTG	1 cut(s)	1501
PsuI	RGATCY	3 cut(s)	651, 1417, 1918
PvuII	CAGCTG	1 cut(s)	1049
RsaI	GTAC	6 cut(s)	308, 377, 1008, 1101, 1110, 1389
RsaNI	GTAC	6 cut(s)	307, 376, 1007, 1100, 1109, 1388
RseI	CAYNNNNRTG	1 cut(s)	1412
SalI	GTCGAC	1 cut(s)	1568
SapI	GCTCTTC	2 cut(s)	420, 1110
Sau96I	GGNCC	5 cut(s)	175, 382, 750, 1377, 1449
ScaI	AGTACT	2 cut(s)	1101, 1389
SchI	GAGTC	4 cut(s)	29, 676, 1169, 1390
ScrFI	CCNGG	4 cut(s)	20, 386, 395, 1191
SduI	GDGCHC	2 cut(s)	1305, 1825
SfaNI	GCATC	7 cut(s)	650, 852, 874, 1618, 1854, 1894, 1978
SfcI	CTRYAG	4 cut(s)	420, 512, 655, 1164
Sfr274I	CTCGAG	1 cut(s)	642
SinI	GGWCC	3 cut(s)	175, 382, 1449
SlaI	CTCGAG	1 cut(s)	642
SmiMI	CAYNNNNRTG	1 cut(s)	1412
SmlI	CTYRAG	8 cut(s)	431, 642, 1095, 1261, 1391, 1421, 1992, 2040
SmoI	CTYRAG	8 cut(s)	431, 642, 1095, 1261, 1391, 1421, 1992, 2040
SsiI	CCGC	4 cut(s)	248, 349, 915, 2107
SspI	AATATT	1 cut(s)	667
SspMI	CTAG	2 cut(s)	291, 2139
StyD4I	CCNGG	4 cut(s)	18, 384, 393, 1189
StyI	CCWWGG	2 cut(s)	459, 1923
TaaI	ACNGT	5 cut(s)	415, 537, 589, 679, 1661
TaiI	ACGT	3 cut(s)	1021, 1308, 2094
TatI	WGTACW	3 cut(s)	1099, 1108, 1387
TauI	GCSGC	3 cut(s)	251, 352, 2110
TfiI	GAWTC	6 cut(s)	141, 152, 170, 242, 791, 1460
TscAI	CASTG	2 cut(s)	891, 1519
TseFI	GTSAC	2 cut(s)	679, 1306
TseI	GCWGC	7 cut(s)	301, 311, 401, 511, 514, 1501, 2110
Tsp45I	GTSAC	2 cut(s)	679, 1306
TspDTI	ATGAA	5 cut(s)	804, 924, 1278, 1307, 1481
TspGWI	ACGGA	5 cut(s)	37, 100, 145, 468, 830
TspRI	CASTG	2 cut(s)	891, 1519
Van91I	CCANNNNNTGG	1 cut(s)	1929
Vha464I	CTTAAG	1 cut(s)	1421
VneI	GTGCAC	1 cut(s)	1821
VpaK11BI	GGWCC	3 cut(s)	175, 382, 1449
XapI	RAATTY	6 cut(s)	86, 332, 1314, 1361, 1752, 2101
XbaI	TCTAGA	1 cut(s)	2138
XceI	RCATGY	1 cut(s)	1798
XhoI	CTCGAG	1 cut(s)	642
XmiI	GTMKAC	1 cut(s)	1569
XmnI	GAANNNNTTC	3 cut(s)	1362, 1720, 1752
XspI	CTAG	2 cut(s)	291, 2139
ZraI	GACGTC	1 cut(s)	2092
ZrmI	AGTACT	2 cut(s)	1101, 1389
Zsp2I	ATGCAT	2 cut(s)	867, 1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.