Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0009405

Physical Location & Seq

Genomic Coordinates Forward (+)

2441056 .. 2448670

Gene Structure 7615 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG036400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGTTGCAGGCGGAGGAGGAGGCGCTTATGTATCAGCAATACGCTGTTCCTGAAGATAATGGAGCATTTGAGCAAAGAGTGCGGCCTTATGTCAATCAAGTTCTTCTGTATGAGACCGAGGTACGCCAGGAGGCTGCTAGGAAAACAGTCCCTGTAGAACAGCTTGAGGAGAAGGCATTGGTCAGTTTGGCCAAGGAGGGGAACTTAACTCCGTCAAAGAATGAACAAGATCATGCGTTCCTGCTGCAGCTGCTTTTCTGGTTCAAACAATCCTTCAGGTGGGTTAATGAACCTCCCTGTGATGGTTGCGGCAAGAAAACCATCAGTGTTGGCATGGATGTTGCACTTCTTCATCAAGGTTCTCGAGTTGAAGTTTATAGATGCAATTCTTGCCCAGCAGAGACTCGTTTCCCACGCTACAATGATCCACTAAAGCTTCTGGAAACAAGAAGGGGTCGTTGTGGGGAATGGGCAAATTGCTTCACACTTTATTGCCGAGCTTTTGGGTATGAATCACGCCTGATCCTGGATTTCACAGATCATGTTTGGACAGAGTGCTTCTCAGAATCTTTAGGAAGATGGATGCATCTTGATCCTTGTGAAGGAGTGTATGACAAACCACTGTTATATGAAAGCGGGTGGAATAAGAAATTAAATTATGTACTTGCCATTGGGAAGGATGGAGTATGTGATGTTACTAAACGCTACACAAGGAAGTGGCATGAGGTTCTTTCTCGACGTAACATTATTGCAGAGCCTGCACTGTCATCTGTGCTTGCTAATATAACAAAAGAATGTCGGAGAGGCTTTACTTCTCAAGTGCGTTCTGCACTTGAAGACCGCGATGAGAAGGAAAGACAACAACTTGAGAGAGATTTACATTCTACAGATGATGCCTCAACCTCATTACCTGGAAGACGAAGTGGGGACAAGGAATGGCGCAAGTCAAGAATGGAAGATGGCTCTGATGAGAGTTGCTCCTTAACTGGTTCTTCTTGTCCACTTCGTCAATGTGTGGACGAGCATGTGACAAAAATTTACAATGGTTTTTTTCCAATTCTTTCACAGTTGGTTAATGAAGGTTTTCCGAAGTCAAGGGCAGTTGAAGTACTGGAGATTCTTAAAGAAATTCTCATAAATCTTAAGAAATCCCCTTTTAAAACAAGGAGGGTGTCAATAGATTCAGTTCCAAATATCAGCCAGTCTGTTGTTCAGCAGCTGTTGCCCTCTTTCACCGAGTTACTCAGCGCTCTTTCATTGAGTAGCAAGGCAGATACTGATGGGAGGGTTGACATTTATTTGGCTGGACCTCCTGTTAAAACCTCTATGGCACTGCCTGTTACATTCCATGCTTTGGACGTCACGATCCGTAATCTCAAGAGTTGTGAAAACTTTGTTAAAGATTCTCTGTGCTTGCCGCTTCTTAAGTTACACAGAATACATTCCGGTGTAGTCCGTGCAAGTGGAGAAGAAATTCCTTTTGGAATTGCCACATCAGCTTTTGATGGGACACGCATGTCCAAGTGGGAAGAGCCAAATGGTGCAGAAGGTTGTTGGATTATGTATAAAGTATCGGATAACCAGATGCACGAACTGGTGGCATATGAGTTGATGTCAGCCAATGATGCACCTGAAAGAGATCCAATGGATTGGGTTGTCGAGGGAAGCAATGATGGGGGGTCAAGCTGGCATGTATTAGATAAACAAACTTCTCAACTATTCGACAGTCGTTTTCAGTGTAGAACATTTAAAGTTTCATCTGAAGGTTTCCTATCAAATGCTTTCAGGTTTAGATTTTTGCGGGTTCGTGATATTCAATCAAATTCTCGGCTGCAATTAGGTAGCATTGATCTCTATTCTAGAAGCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000224 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006515 GO:0006516 GO:0006517 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009636 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0010035 GO:0010188 GO:0010193 GO:0014070 GO:0016787 GO:0016810 GO:0016811 GO:0019538 GO:0030163 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0051603 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Rad4 Transglut_core

Protein Analysis

623

Amino Acids

71.01

Weight (kDa)

6.14

Isoelectric Point (pI)

56.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transglut_core	PF01841	121 - 199	9.9e-17	Transglutaminase-like superfamily
Rad4	PF03835	181 - 289	2.4e-11	Rad4 transglutaminase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009405)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49570
fragaria_vesca	FvH4_6g03130 FvH4_6g03130
malus_domestica	MD12G1238800.v1.1
prunus_persica	Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1 Prupe.6G341700_v2.0.a1
pyrus_communis	pycom12g21950
rosa_chinensis	RchiOBHm_Chr3g0451381
rosa_laevigata	RLG00000025664
rosa_multiflora	Rmu_sc0002575.1_g000005 Rmu_sc0012229.1_g000001
rosa_roxburghii	Rroxscaffold_164G00436540 Rroxscaffold_6G00428800
rosa_rugosa	Rorug02G0633400
rosa_samantha	Rh3AG036400 Rh3BG037000 Rh3CG035600 Rh3DG036500
rosa_wichuraiana	Rw3G002680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1516
AatII	GACGTC	1 cut(s)	1362
AccB7I	CCANNNNNTGG	1 cut(s)	1354
AccII	CGCG	1 cut(s)	843
AciI	CCGC	7 cut(s)	11, 82, 309, 636, 841, 1418, 1801
AclWI	GGATC	5 cut(s)	419, 517, 587, 1360, 1634
AcoI	YGGCCR	1 cut(s)	189
AcsI	RAATTY	4 cut(s)	1035, 1128, 1473, 1822
AcuI	CTGAAG	3 cut(s)	72, 259, 1782
AcyI	GRCGYC	1 cut(s)	1359
AfaI	GTAC	3 cut(s)	123, 663, 1110
AfeI	AGCGCT	1 cut(s)	1249
AfiI	CCNNNNNNNGG	6 cut(s)	198, 279, 302, 526, 602, 1354
AflII	CTTAAG	2 cut(s)	1142, 1424
AgsI	TTSAA	5 cut(s)	265, 371, 836, 1106, 1817
AjnI	CCWGG	3 cut(s)	126, 525, 910
AjuI	GAANNNNNNNTTGG	2 cut(s)	1464, 1496
AluBI	AGCT	7 cut(s)	163, 250, 436, 500, 1219, 1499, 1686
AluI	AGCT	7 cut(s)	163, 250, 436, 500, 1219, 1499, 1686
Alw26I	GTCTC	2 cut(s)	107, 395
AlwI	GGATC	5 cut(s)	419, 517, 587, 1360, 1634
AlwNI	CAGNNNCTG	4 cut(s)	152, 758, 1219, 1277
Ama87I	CYCGRG	1 cut(s)	363
Aor51HI	AGCGCT	1 cut(s)	1249
AoxI	GGCC	2 cut(s)	83, 189
ApeKI	GCWGC	6 cut(s)	134, 244, 247, 250, 1216, 1831
ApoI	RAATTY	4 cut(s)	1035, 1128, 1473, 1822
Asp700I	GAANNNNTTC	3 cut(s)	1083, 1441, 1473
AspLEI	GCGC	3 cut(s)	25, 942, 1250
AspS9I	GGNCC	1 cut(s)	1307
AsuHPI	GGTGA	1 cut(s)	1225
AvaI	CYCGRG	1 cut(s)	363
AvaII	GGWCC	1 cut(s)	1307
BalI	TGGCCA	1 cut(s)	191
BbsI	GAAGAC	2 cut(s)	843, 922
BbvI	GCAGC	6 cut(s)	121, 231, 237, 259, 1228, 1818
BccI	CCATC	8 cut(s)	296, 329, 573, 674, 953, 1274, 1499, 1667
BciT130I	CCWGG	3 cut(s)	128, 527, 912
BcoDI	GTCTC	2 cut(s)	107, 395
BfaI	CTAG	2 cut(s)	138, 1860
BfmI	CTRYAG	3 cut(s)	153, 245, 885
BfoI	RGCGCY	2 cut(s)	26, 1251
BfrI	CTTAAG	2 cut(s)	1142, 1424
BisI	GCNGC	9 cut(s)	83, 135, 245, 248, 251, 310, 1217, 1418, 1832
BlsI	GCNGC	9 cut(s)	84, 136, 246, 249, 252, 311, 1218, 1419, 1833
BmcAI	AGTACT	1 cut(s)	1110
Bme1390I	CCNGG	3 cut(s)	128, 527, 912
Bme18I	GGWCC	1 cut(s)	1307
BmeT110I	CYCGRG	1 cut(s)	363
BmgT120I	GGNCC	1 cut(s)	1307
BmrFI	CCNGG	3 cut(s)	128, 527, 912
BmsI	GCATC	6 cut(s)	371, 573, 595, 883, 1575, 1615
BpiI	GAAGAC	2 cut(s)	843, 922
BplI	GAGNNNNNCTC	4 cut(s)	545, 577, 962, 994
BpmI	CTGGAG	1 cut(s)	1133
BpuEI	CTTGAG	4 cut(s)	185, 801, 887, 1361
BsaHI	GRCGYC	1 cut(s)	1359
BsaI	GGTCTC	1 cut(s)	107
BsaJI	CCNNGG	2 cut(s)	117, 192
BsaWI	WCCGGW	1 cut(s)	1445
Bsc4I	CCNNNNNNNGG	6 cut(s)	198, 279, 302, 526, 602, 1354
Bse1I	ACTGG	4 cut(s)	991, 1116, 1201, 1599
Bse3DI	GCAATG	1 cut(s)	1675
BseBI	CCWGG	3 cut(s)	128, 527, 912
BseDI	CCNNGG	2 cut(s)	117, 192
BseGI	GGATG	3 cut(s)	343, 588, 685
BseLI	CCNNNNNNNGG	6 cut(s)	198, 279, 302, 526, 602, 1354
BseMI	GCAATG	1 cut(s)	1675
BseMII	CTCAG	2 cut(s)	576, 1258
BseNI	ACTGG	4 cut(s)	991, 1116, 1201, 1599
BseRI	GAGGAG	3 cut(s)	29, 32, 182
BseXI	GCAGC	6 cut(s)	121, 231, 237, 259, 1228, 1818
BseYI	CCCAGC	1 cut(s)	394
BsgI	GTGCAG	3 cut(s)	744, 813, 1563
Bsh1236I	CGCG	1 cut(s)	843
BshFI	GGCC	2 cut(s)	85, 191
BsiHKCI	CYCGRG	1 cut(s)	363
BsiSI	CCGG	1 cut(s)	1446
BslFI	GGGAC	3 cut(s)	134, 941, 1522
BslI	CCNNNNNNNGG	6 cut(s)	198, 279, 302, 526, 602, 1354
BsmAI	GTCTC	2 cut(s)	107, 395
BsmFI	GGGAC	3 cut(s)	134, 941, 1522
BsnI	GGCC	2 cut(s)	85, 191
Bso31I	GGTCTC	1 cut(s)	107
BsoBI	CYCGRG	1 cut(s)	363
Bsp143I	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
BspACI	CCGC	7 cut(s)	11, 82, 309, 636, 841, 1418, 1801
BspANI	GGCC	2 cut(s)	85, 191
BspCNI	CTCAG	2 cut(s)	575, 1257
BspFNI	CGCG	1 cut(s)	843
BspMAI	CTGCAG	1 cut(s)	249
BspPI	GGATC	5 cut(s)	419, 517, 587, 1360, 1634
BspQI	GCTCTTC	1 cut(s)	1524
BspTI	CTTAAG	2 cut(s)	1142, 1424
BspTNI	GGTCTC	1 cut(s)	107
BsrDI	GCAATG	1 cut(s)	1675
BsrI	ACTGG	4 cut(s)	991, 1116, 1201, 1599
BssECI	CCNNGG	2 cut(s)	117, 192
BssMI	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
BssNI	GRCGYC	1 cut(s)	1359
BssT1I	CCWWGG	1 cut(s)	192
Bst2UI	CCWGG	3 cut(s)	128, 527, 912
Bst4CI	ACNGT	5 cut(s)	148, 624, 765, 1068, 1727
Bst6I	CTCTTC	1 cut(s)	1524
BstACI	GRCGYC	1 cut(s)	1359
BstAFI	CTTAAG	2 cut(s)	1142, 1424
BstAPI	GCANNNNNTGC	4 cut(s)	79, 390, 758, 1222
BstC8I	GCNNGC	5 cut(s)	9, 759, 777, 1415, 1688
BstDEI	CTNAG	2 cut(s)	562, 1244
BstENI	CCTNNNNNAGG	1 cut(s)	600
BstF5I	GGATG	3 cut(s)	343, 588, 685
BstFNI	CGCG	1 cut(s)	843
BstH2I	RGCGCY	2 cut(s)	26, 1251
BstHHI	GCGC	3 cut(s)	25, 942, 1250
BstKTI	GATC	8 cut(s)	232, 427, 525, 541, 595, 1368, 1642, 1852
BstMAI	GTCTC	2 cut(s)	107, 395
BstMBI	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
BstMWI	GCNNNNNNNGC	7 cut(s)	79, 250, 390, 758, 1222, 1496, 1625
BstNI	CCWGG	3 cut(s)	128, 527, 912
BstNSI	RCATGY	3 cut(s)	1028, 1519, 1694
BstSCI	CCNGG	3 cut(s)	126, 525, 910
BstSFI	CTRYAG	3 cut(s)	153, 245, 885
BstUI	CGCG	1 cut(s)	843
BstV1I	GCAGC	6 cut(s)	121, 231, 237, 259, 1228, 1818
BstV2I	GAAGAC	2 cut(s)	843, 922
BstX2I	RGATCY	1 cut(s)	1639
BstXI	CCANNNNNNTGG	1 cut(s)	1650
BstYI	RGATCY	1 cut(s)	1639
BsuRI	GGCC	2 cut(s)	85, 191
BtgZI	GCGATG	1 cut(s)	858
BtsCI	GGATG	3 cut(s)	343, 588, 685
BtsI	GCAGTG	1 cut(s)	1331
BtsIMutI	CAGTG	5 cut(s)	331, 620, 761, 1331, 1742
Cac8I	GCNNGC	5 cut(s)	9, 759, 777, 1415, 1688
CaiI	CAGNNNCTG	4 cut(s)	152, 758, 1219, 1277
CfoI	GCGC	3 cut(s)	25, 942, 1250
Cfr13I	GGNCC	1 cut(s)	1307
Csp6I	GTAC	3 cut(s)	122, 662, 1109
CviAII	CATG	8 cut(s)	233, 334, 542, 722, 1025, 1349, 1516, 1691
CviQI	GTAC	3 cut(s)	122, 662, 1109
DdeI	CTNAG	2 cut(s)	562, 1244
DpnI	GATC	8 cut(s)	231, 426, 524, 540, 594, 1367, 1641, 1851
DpnII	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
DraI	TTTAAA	2 cut(s)	1159, 1750
DrdI	GACNNNNNNGTC	1 cut(s)	1516
DseDI	GACNNNNNNGTC	1 cut(s)	1516
EaeI	YGGCCR	1 cut(s)	189
Eam1104I	CTCTTC	1 cut(s)	1524
EarI	CTCTTC	1 cut(s)	1524
EciI	GGCGGA	1 cut(s)	26
Eco130I	CCWWGG	1 cut(s)	192
Eco31I	GGTCTC	1 cut(s)	107
Eco47I	GGWCC	1 cut(s)	1307
Eco47III	AGCGCT	1 cut(s)	1249
Eco57I	CTGAAG	3 cut(s)	72, 259, 1782
Eco88I	CYCGRG	1 cut(s)	363
EcoNI	CCTNNNNNAGG	1 cut(s)	600
EcoRII	CCWGG	3 cut(s)	126, 525, 910
EcoT14I	CCWWGG	1 cut(s)	192
EcoT22I	ATGCAT	1 cut(s)	588
ErhI	CCWWGG	1 cut(s)	192
FaeI	CATG	8 cut(s)	236, 337, 545, 725, 1028, 1352, 1519, 1694
FaqI	GGGAC	3 cut(s)	134, 941, 1522
FatI	CATG	8 cut(s)	232, 333, 541, 721, 1024, 1348, 1515, 1690
FauI	CCCGC	2 cut(s)	629, 1794
FauNDI	CATATG	1 cut(s)	1603
Fnu4HI	GCNGC	9 cut(s)	83, 135, 245, 248, 251, 310, 1217, 1418, 1832
FokI	GGATG	3 cut(s)	350, 595, 692
Fsp4HI	GCNGC	9 cut(s)	83, 135, 245, 248, 251, 310, 1217, 1418, 1832
FspBI	CTAG	2 cut(s)	138, 1860
GlaI	GCGC	3 cut(s)	24, 941, 1249
GluI	GCNGC	9 cut(s)	83, 135, 245, 248, 251, 310, 1217, 1418, 1832
GsaI	CCCAGC	1 cut(s)	398
GsuI	CTGGAG	1 cut(s)	1133
HaeII	RGCGCY	2 cut(s)	26, 1251
HaeIII	GGCC	2 cut(s)	85, 191
HapII	CCGG	1 cut(s)	1446
HhaI	GCGC	3 cut(s)	25, 942, 1250
Hin1I	GRCGYC	1 cut(s)	1359
Hin1II	CATG	8 cut(s)	236, 337, 545, 725, 1028, 1352, 1519, 1694
Hin6I	GCGC	3 cut(s)	23, 940, 1248
HinP1I	GCGC	3 cut(s)	23, 940, 1248
HincII	GTYRAC	1 cut(s)	1291
HindII	GTYRAC	1 cut(s)	1291
HindIII	AAGCTT	1 cut(s)	434
HinfI	GANTC	6 cut(s)	403, 512, 566, 1117, 1181, 1403
HpaII	CCGG	1 cut(s)	1446
HphI	GGTGA	1 cut(s)	1225
Hpy166II	GTNNAC	3 cut(s)	1001, 1018, 1291
Hpy188I	TCNGA	6 cut(s)	565, 801, 967, 1089, 1576, 1762
Hpy8I	GTNNAC	3 cut(s)	1001, 1018, 1291
Hpy99I	CGWCG	1 cut(s)	741
HpyAV	CCTTC	9 cut(s)	166, 283, 444, 596, 670, 844, 1073, 1541, 1757
HpyCH4III	ACNGT	5 cut(s)	148, 624, 765, 1068, 1727
HpyCH4IV	ACGT	2 cut(s)	739, 1359
HpyF10VI	GCNNNNNNNGC	7 cut(s)	79, 250, 390, 758, 1222, 1496, 1625
HpyF3I	CTNAG	2 cut(s)	562, 1244
HpySE526I	ACGT	2 cut(s)	739, 1359
Hsp92I	GRCGYC	1 cut(s)	1359
Hsp92II	CATG	8 cut(s)	236, 337, 545, 725, 1028, 1352, 1519, 1694
HspAI	GCGC	3 cut(s)	23, 940, 1248
Kzo9I	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
LguI	GCTCTTC	1 cut(s)	1524
LmnI	GCTCC	2 cut(s)	62, 983
Lsp1109I	GCAGC	6 cut(s)	121, 231, 237, 259, 1228, 1818
LweI	GCATC	6 cut(s)	371, 573, 595, 883, 1575, 1615
MaeI	CTAG	2 cut(s)	138, 1860
MaeII	ACGT	2 cut(s)	739, 1359
MaeIII	GTNAC	7 cut(s)	694, 740, 1027, 1239, 1339, 1360, 1428
MalI	GATC	8 cut(s)	231, 426, 524, 540, 594, 1367, 1641, 1851
MboI	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
MflI	RGATCY	1 cut(s)	1639
MlsI	TGGCCA	1 cut(s)	191
MluNI	TGGCCA	1 cut(s)	191
MlyI	GAGTC	1 cut(s)	397
MmeI	TCCRAC	2 cut(s)	779, 1535
Mox20I	TGGCCA	1 cut(s)	191
Mph1103I	ATGCAT	1 cut(s)	588
MroXI	GAANNNNTTC	3 cut(s)	1083, 1441, 1473
MscI	TGGCCA	1 cut(s)	191
MslI	CAYNNNNRTG	1 cut(s)	1446
Msp20I	TGGCCA	1 cut(s)	191
MspA1I	CMGCKG	2 cut(s)	250, 1219
MspCI	CTTAAG	2 cut(s)	1142, 1424
MspI	CCGG	1 cut(s)	1446
MspR9I	CCNGG	3 cut(s)	128, 527, 912
MvaI	CCWGG	3 cut(s)	128, 527, 912
MvnI	CGCG	1 cut(s)	843
MwoI	GCNNNNNNNGC	7 cut(s)	79, 250, 390, 758, 1222, 1496, 1625
NdeI	CATATG	1 cut(s)	1603
NdeII	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
NlaIII	CATG	8 cut(s)	236, 337, 545, 725, 1028, 1352, 1519, 1694
NmeAIII	GCCGAG	2 cut(s)	521, 1807
NmuCI	GTSAC	2 cut(s)	1027, 1360
NsiI	ATGCAT	1 cut(s)	588
NspI	RCATGY	3 cut(s)	1028, 1519, 1694
PaeR7I	CTCGAG	1 cut(s)	363
PciSI	GCTCTTC	1 cut(s)	1524
PdmI	GAANNNNTTC	3 cut(s)	1083, 1441, 1473
PfeI	GAWTC	5 cut(s)	512, 566, 1117, 1181, 1403
PflMI	CCANNNNNTGG	1 cut(s)	1354
PfoI	TCCNGGA	1 cut(s)	525
PkrI	GCNGC	9 cut(s)	84, 136, 246, 249, 252, 311, 1218, 1419, 1833
PleI	GAGTC	1 cut(s)	397
PpsI	GAGTC	1 cut(s)	397
Psp6I	CCWGG	3 cut(s)	126, 525, 910
PspFI	CCCAGC	1 cut(s)	394
PspGI	CCWGG	3 cut(s)	126, 525, 910
PspPI	GGNCC	1 cut(s)	1307
PstI	CTGCAG	1 cut(s)	249
PstNI	CAGNNNCTG	4 cut(s)	152, 758, 1219, 1277
PsuI	RGATCY	1 cut(s)	1639
PvuII	CAGCTG	2 cut(s)	250, 1219
RsaI	GTAC	3 cut(s)	123, 663, 1110
RsaNI	GTAC	3 cut(s)	122, 662, 1109
RseI	CAYNNNNRTG	1 cut(s)	1446
SapI	GCTCTTC	1 cut(s)	1524
SatI	GCNGC	9 cut(s)	83, 135, 245, 248, 251, 310, 1217, 1418, 1832
Sau3AI	GATC	8 cut(s)	229, 424, 522, 538, 592, 1365, 1639, 1849
Sau96I	GGNCC	1 cut(s)	1307
ScaI	AGTACT	1 cut(s)	1110
SchI	GAGTC	1 cut(s)	397
ScrFI	CCNGG	3 cut(s)	128, 527, 912
SfaNI	GCATC	6 cut(s)	371, 573, 595, 883, 1575, 1615
SfcI	CTRYAG	3 cut(s)	153, 245, 885
Sfr274I	CTCGAG	1 cut(s)	363
SinI	GGWCC	1 cut(s)	1307
SlaI	CTCGAG	1 cut(s)	363
SmiMI	CAYNNNNRTG	1 cut(s)	1446
SmlI	CTYRAG	7 cut(s)	164, 363, 816, 866, 1142, 1376, 1424
SmoI	CTYRAG	7 cut(s)	164, 363, 816, 866, 1142, 1376, 1424
SsiI	CCGC	7 cut(s)	11, 82, 309, 636, 841, 1418, 1801
SspMI	CTAG	2 cut(s)	138, 1860
StyD4I	CCNGG	3 cut(s)	126, 525, 910
StyI	CCWWGG	1 cut(s)	192
TaaI	ACNGT	5 cut(s)	148, 624, 765, 1068, 1727
TaiI	ACGT	2 cut(s)	742, 1362
TaqI	TCGA	4 cut(s)	364, 736, 1659, 1722
TaqII	GACCGA	1 cut(s)	131
TatI	WGTACW	2 cut(s)	661, 1108
TauI	GCSGC	3 cut(s)	85, 312, 1420
TfiI	GAWTC	5 cut(s)	512, 566, 1117, 1181, 1403
TscAI	CASTG	5 cut(s)	331, 627, 768, 1338, 1742
TseFI	GTSAC	2 cut(s)	1027, 1360
TseI	GCWGC	6 cut(s)	134, 244, 247, 250, 1216, 1831
Tsp45I	GTSAC	2 cut(s)	1027, 1360
TspDTI	ATGAA	8 cut(s)	237, 303, 341, 525, 645, 1092, 1245, 1746
TspGWI	ACGGA	3 cut(s)	201, 1358, 1445
TspRI	CASTG	5 cut(s)	331, 627, 768, 1338, 1742
Van91I	CCANNNNNTGG	1 cut(s)	1354
Vha464I	CTTAAG	2 cut(s)	1142, 1424
VpaK11BI	GGWCC	1 cut(s)	1307
XagI	CCTNNNNNAGG	1 cut(s)	600
XapI	RAATTY	4 cut(s)	1035, 1128, 1473, 1822
XbaI	TCTAGA	1 cut(s)	1859
XceI	RCATGY	3 cut(s)	1028, 1519, 1694
XhoI	CTCGAG	1 cut(s)	363
XmnI	GAANNNNTTC	3 cut(s)	1083, 1441, 1473
XspI	CTAG	2 cut(s)	138, 1860
ZraI	GACGTC	1 cut(s)	1360
ZrmI	AGTACT	1 cut(s)	1110
Zsp2I	ATGCAT	1 cut(s)	588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.