Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0010880

Physical Location & Seq

Genomic Coordinates Forward (+)

23851633 .. 23860785

Gene Structure 9153 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3879 bp

ATGGCTGTTCCTGTTGAAGAAGCCATTGCCGCTCTATCCACCTTCTCACTCGAGAATGCTCTTATTCAAGAGGGAAAGGAGATGGGATCAGTGCTTTATACGTATCGCAGTTGTGTCAAAGCACTTCCTCAGCTTCCTGATAATATGAAACAAAGTCAAGCTGACTTGTATCTAGAAACATATCAAGTTTTGGACTTGGAAATGAGCCGTTTGCGTGAAATACAACGATGGCAAGCATCAGCTGCCGCAAAGGTATTAGCTTTTTCAAACCTCAATTTACACACTTTGTTTGTTATCCTTGATTTGAAATTTCACAGTGGCATGGATGTTTTTGTACAGCTAGCTGCAGATATGCAACGGTTTTCTAGGCCTGAGCGACGCATTAATGGCCCCACAGTAACTCATCTCTGGTCCATGTTGAAGTTACTTGACACTCTGGTGCAACTTGATCATCTCAAAAATGCCAAAGCAAGCATACCGAATGATTTCTCTTGGTATAAAAGTGTACAGTGGCATGATACTGATACGATGAGAGAGGAGCTAGATGACTTACAGTGTGCTATGAGTTCCTTGACACAATATAGTGTAGAAGACATCCTTCAAGTTCTCATAGTCTTTGCTGTTGAGTCATTAGAGCTGGATTTTGCACTTCTGTTCCCAGAGCGGCATATTCTTCTACGTGTTTTGCCAATTCTTGTTGTTTTAGCAACATCATCGGAAAAGGATAGCGAGTCTTTGTACAAGAGAGTGAAAATCAACAGACTGATCAATATATTTAAGAATGATCCAGTAATTCCTGCATTTCCTGATCTTCATCTTTCTCCTGTTGCAATCATGAAAGAATTGTCAATATACTTCCAGAAGTTTTCCACCCAAACTCGTCTTCTTAGTCTTCCCTCACCTCATGAGCTTCCATCCCGCGAGGCACAAGAATATCCTTTGATTTTTTTTCATTATTTATTAAAAGTAAAATTATGTTTTTATATTGGGAATTTAGCAACAGACAATCCTGATATTGATTGGTGCAAAGAAGTGAAGGGAAACATATATGATATGGTTGTTGAAGGTTTTCAGCTGTTGAGTAGATGGACTGCACGCATTTGGGAACAATGTGCATGGAAGTTTTCTCGTCCCTGCAAGGATATAGTTCCTTCTGAAACACAAGAGGCTTTAGCATCATTTTCTGACTATGAAAAGGTGGTACGATATAACTATAGTGCGGAGGAAAGGAAAGCACTGGTTGAACTTGTTGGTTACATAAAGAGCATTGGATCACTGATGCAGTGCAACGACACTTTGGTAGCTGATGCTTTATGGGAGACAATTCATGCAGAGGTCCAGGATTTTGTTCAGAATACATTGGCCACTATGTTGAGGACTACCTTCCGAAAGAAGAAGGACCTATCTAGGATCCTTTCTGATATGCGGACTCTTTCAGCAGACTGGATGGCAAATACTAGCAAGTCTGAGTCTGGATCCCTACAACAAGGGGGTGATGAAAGCAAAGGAAACTTTTTTTATCCAAGGCCGGTTGCACCAACAGCTGCTCAGGCTCACTGCTTGCAGTTCCTCATATATGAGGCAGTGTCTGGTGGTAATCTTAGGAAGCCTGGAGGACTCTTTGGGAATAGTGGGTCTGAGATTCCTGTTAATGATCTAAAACAGTTGGAAACATTCTTTTACAAGCTCAGATTCTTCCTGCATATATTGGACTACTCAGTGACTGTGGCAACTTTGACGGATCTTGGTTTCTTGTGGTTTAGAGAATTTTATTTGGAATCTTCTCGTGTTATTCAGTTTCCCATTGAGTGTTCTCTACCCTGGATGTTGGTGGATTATGTGCTGGAGTCGCAGAATGCGGGCATCCTAGAAAGTGTGTTGATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCACTGGTTTTGCTCAAGCAACGGTTCCTCTATGATGAAATTGAGGCTGAGGTGGACCATTGTTTCGATATATTTGTTTCAAAGCTTTGTGATAGTATTTTCACTTATTACAAGAGCTGGGCAGCAAGTGAGCTACTTGATACTTCATTCCTCTTCGCATTGGACAATGGAGAAAAATATTCTGTTGAGCCTATGAGGTTCACTGCCCTACTGAAGATGACCAGAGTGAAGTTGCTTGGGAGGATGATTGATTTGAGAAGTTTGATTGCTGACCGGATGAACAAAGTTTTCAGAGATAATATTGAGTTTCTATTTGATCGTTTTGAGTCTCAGGATCTGTGCGCTATTGTGGAATTAGAAAATCTGTTGGATATCTTAAAACATGCCCATGGGTTGCTATCCAGGGATCTCTCAATAGACTCGTTCAGTATCATGTTGAATGAGATGCAAGAAAACATATCACTTGTGTCATACTGTAGTAGACTTGCTTCCCAGATTTGGTCAGAGATGCAAAATGATTTCTTGCCAAACTTCATCCTTTGCAATACTACCCAGCGTTTCACCCGATCATCAAAGGTGCCTCTTGTACCTATTCAAAAGCCATCGGTTCCCTCTGCCAAGCCTAATTTCTATTGTGGTACTAAAGACTTAAATGCAGCTCATCAGAGTTTTGCACGGTTGCACAGTGGATTTTTTGGGATGCCCCACATGTTTTCAATTGTTAGGCTTCTAGGGTCTAGATCATTGCCTTGGCTAATTCGAGCACTTCTAGATCATGTATCAAACAAGATAGCTGCGGTGGAACCAATGATAACAGGGCTACAAGAAGCTTTGCCGAAGTCTATTGGATTGCTTCCGTTTGATGGAGGCGTGACAGGTTGTATGAGGCTTGTTAAAGAACAACTTAGTTGGGGAACCAAATCACAGCTCAAAAGCGAAGTTCTTCGAGGGATAAAGGAGATTGGAAGTGTGTTATATTGGTTGGGGCTTCTTGATATCGTGTTGAGAGAAACAGATACGACGCATTTCATGCAAACAGCCCCTTGGTTGGGCTTGCTTCCTGGTGCAGATGGACAAATACTGCATTCTCAAGATGGCGGAGAAAGCCCTATTGTCAACCTCTTCAAATCAGCTACTTCTGTAATTGTGTCAAATCCTGGGTGCCGAAATCCGACTTCCTTCCATACCTTATCAAAACAGGCAGAAGCTGCAGATCTGTTGTACAAGGCTAACATGAATACTGGAAGTGTGTTGGAATACGCCCTAGCATTTACAAGTGCGGCTCTGGACAAATATTGTAGCAAATGGAGTGCTGTTCCAAAAACAGGGTTCATCGACATCACAACGTCAAAGGATTTCTATCGTATATACAGCGGTCTTCAAATTTGGTACCTAGAGGAGTCTGTTCGAGTAACACCAAGCAGTCATGAAGTGCAGGGTGATTCCATAGCTTGGGGTGGTTGCACCATAATATACTTGCTTGGGCAACAGCTACATTTTGAGCTCTTGGATTTTTCATACCAGGTCCTCAACGTTGCCGAAGTGGAGTCTGCATCGATCAGCCAAGCCCACAAGAGTCCTCATTTTGTCCAGTTACTAATGTCTGTGGTCTACCGTTCCCATATTCCATTTGTTGTTTCTAATGTTTCTGAATTTCGCATAAACTCTCCGTTCTCGAGTCGTCCTCTGATCAATGATGTCTTTTTGCATGCAAACATGGTATTGGTTTTAAGTTTTAACTTGGTTGTTTGGTCATATGTGGTGAAGGGATGGGACGGTCTGTTAGAAGTAATGAAGAAAGCAAGGAGGCTAAACAATCATGTGTTCAGCATGCTAAAGGCGCGCTGCCCGCTCGAAGACAAGACGGCTTGCGCTATCAAGCAAAGCGGTGCCCCTCTGCATCGGGTCAAGTTCGAGAACACCGTCTCTGCGTTTGAAACTCTTCCGCAGAAAGAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010638 GO:0016043 GO:0030029 GO:0030036 GO:0030154 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032502 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0032991 GO:0033043 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0045010 GO:0048468 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0090558 GO:0090626 GO:0097435 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko03013 ko04810 map03013 map04810

Pfam Domains

Protein Families

DUF1394 FragX_IP

Protein Analysis

1293

Amino Acids

146.7

Weight (kDa)

5.89

Isoelectric Point (pI)

42.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FragX_IP	PF05994	332 - 1171	0.0	Cytoplasmic Fragile-X interacting family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0010880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18410 AT5G18410 AT5G18410
fragaria_vesca	FvH4_6g01330 FvH4_6g01330 FvH4_6g01330
malus_domestica	MD12G1252900.v1.1
prunus_persica	Prupe.6G354800_v2.0.a1
pyrus_communis	pycom12g23200
rosa_chinensis	RchiOBHm_Chr3g0448901
rosa_laevigata	RLG00000025868
rosa_multiflora	Rmu_sc0003116.1_g000019
rosa_roxburghii	Rroxscaffold_6G00427090
rosa_rugosa	Rorug02G0617100 Rorug02G0617100
rosa_samantha	Rh3AG015400 Rh3BG015200 Rh3CG014100 Rh3DG015700
rosa_wichuraiana	Rw3G001140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	3306
AccB1I	GGYRCC	4 cut(s)	2494, 3078, 3306, 3806
AccB7I	CCANNNNNTGG	1 cut(s)	3369
AccBSI	CCGCTC	3 cut(s)	32, 664, 3769
AccI	GTMKAC	2 cut(s)	2398, 3528
AccII	CGCG	2 cut(s)	921, 3760
AclI	AACGTT	1 cut(s)	3450
AcoI	YGGCCR	1 cut(s)	1362
AcsI	RAATTY	5 cut(s)	308, 991, 1766, 3300, 3569
AcuI	CTGAAG	1 cut(s)	2150
AfaI	GTAC	8 cut(s)	336, 507, 740, 1203, 2505, 2557, 3140, 3308
AfiI	CCNNNNNNNGG	6 cut(s)	2415, 2780, 2965, 2966, 3242, 3369
AflIII	ACRYGT	2 cut(s)	679, 2625
AjnI	CCWGG	7 cut(s)	1338, 1609, 1820, 2318, 2977, 3073, 3438
AjuI	GAANNNNNNNTTGG	4 cut(s)	867, 899, 2528, 2560
AleI	CACNNNNGTG	1 cut(s)	437
Alw21I	GWGCWC	2 cut(s)	2683, 3423
Alw26I	GTCTC	3 cut(s)	1313, 2250, 3847
AlwNI	CAGNNNCTG	4 cut(s)	1589, 1724, 2254, 3125
Ama87I	CYCGRG	2 cut(s)	50, 3592
AoxI	GGCC	5 cut(s)	368, 388, 1362, 1526, 3873
ApeKI	GCWGC	8 cut(s)	242, 344, 1544, 2039, 2573, 2711, 3125, 3762
ApoI	RAATTY	5 cut(s)	308, 991, 1766, 3300, 3569
ArsI	GACNNNNNNTTYG	2 cut(s)	1964, 1996
AseI	ATTAAT	1 cut(s)	384
Asp700I	GAANNNNTTC	4 cut(s)	485, 1068, 2859, 3858
Asp718I	GGTACC	1 cut(s)	3306
AspLEI	GCGC	4 cut(s)	2261, 3760, 3762, 3791
AspS9I	GGNCC	6 cut(s)	389, 411, 1336, 1399, 1972, 3442
AsuHPI	GGTGA	5 cut(s)	891, 1505, 2470, 3368, 3691
AsuNHI	GCTAGC	1 cut(s)	340
AvaI	CYCGRG	2 cut(s)	50, 3592
AvaII	GGWCC	5 cut(s)	411, 1336, 1399, 1972, 3442
BaeGI	GKGCMC	1 cut(s)	3811
BalI	TGGCCA	1 cut(s)	1364
BamHI	GGATCC	2 cut(s)	1410, 1475
BanI	GGYRCC	4 cut(s)	2494, 3078, 3306, 3806
BanII	GRGCYC	1 cut(s)	3423
BarI	GAAGNNNNNNTAC	2 cut(s)	2389, 2421
BauI	CACGAG	1 cut(s)	1785
BbsI	GAAGAC	5 cut(s)	597, 875, 884, 3287, 3780
Bbv12I	GWGCWC	2 cut(s)	2683, 3423
BbvCI	CCTCAGC	2 cut(s)	129, 1965
BbvI	GCAGC	8 cut(s)	229, 331, 1531, 2051, 2585, 2698, 3112, 3749
BceAI	ACGGC	2 cut(s)	192, 3798
BcgI	CGANNNNNNTGC	2 cut(s)	696, 730
BciT130I	CCWGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
BclI	TGATCA	3 cut(s)	448, 765, 3606
BcoDI	GTCTC	3 cut(s)	1313, 2250, 3847
BfmI	CTRYAG	4 cut(s)	345, 1213, 2392, 3126
BglII	AGATCT	1 cut(s)	3130
BlpI	GCTNAGC	1 cut(s)	1911
Bme1390I	CCNGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
Bme18I	GGWCC	5 cut(s)	411, 1336, 1399, 1972, 3442
BmeT110I	CYCGRG	2 cut(s)	50, 3592
BmgT120I	GGNCC	6 cut(s)	389, 411, 1336, 1399, 1972, 3442
BmrFI	CCNGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
BmtI	GCTAGC	1 cut(s)	344
BpiI	GAAGAC	5 cut(s)	597, 875, 884, 3287, 3780
BplI	GAGNNNNNCTC	2 cut(s)	3586, 3618
BpmI	CTGGAG	2 cut(s)	1632, 1865
Bpu10I	CCTNAGC	4 cut(s)	129, 372, 1548, 1965
Bpu1102I	GCTNAGC	1 cut(s)	1911
BpuEI	CTTGAG	2 cut(s)	1916, 2991
Bsa29I	ATCGAT	1 cut(s)	3473
BsaAI	YACGTR	2 cut(s)	102, 680
BsaBI	GATNNNNATC	2 cut(s)	813, 3276
BsaJI	CCNNGG	7 cut(s)	1523, 1820, 2305, 2319, 2666, 2960, 3074
BsaWI	WCCGGW	1 cut(s)	2190
Bsc4I	CCNNNNNNNGG	6 cut(s)	2415, 2780, 2965, 2966, 3242, 3369
Bse118I	RCCGGY	1 cut(s)	1528
Bse1I	ACTGG	6 cut(s)	788, 1242, 1448, 1926, 3163, 3508
Bse3DI	GCAATG	2 cut(s)	24, 2660
Bse8I	GATNNNNATC	2 cut(s)	813, 3276
BseBI	CCWGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
BseCI	ATCGAT	1 cut(s)	3473
BseDI	CCNNGG	7 cut(s)	1523, 1820, 2305, 2319, 2666, 2960, 3074
BseJI	GATNNNNATC	2 cut(s)	813, 3276
BseLI	CCNNNNNNNGG	6 cut(s)	2415, 2780, 2965, 2966, 3242, 3369
BseMI	GCAATG	2 cut(s)	24, 2660
BseNI	ACTGG	6 cut(s)	788, 1242, 1448, 1926, 3163, 3508
BsePI	GCGCGC	1 cut(s)	3758
BseRI	GAGGAG	2 cut(s)	551, 3329
BseSI	GKGCMC	1 cut(s)	3811
BseXI	GCAGC	8 cut(s)	229, 331, 1531, 2051, 2585, 2698, 3112, 3749
BseYI	CCCAGC	2 cut(s)	2034, 2469
BsgI	GTGCAG	3 cut(s)	1077, 3003, 3371
Bsh1236I	CGCG	2 cut(s)	921, 3760
BshFI	GGCC	5 cut(s)	370, 390, 1364, 1528, 3875
BshNI	GGYRCC	4 cut(s)	2494, 3078, 3306, 3806
BshVI	ATCGAT	1 cut(s)	3473
BsiHKAI	GWGCWC	2 cut(s)	2683, 3423
BsiHKCI	CYCGRG	2 cut(s)	50, 3592
BsiSI	CCGG	2 cut(s)	1529, 2191
BslFI	GGGAC	2 cut(s)	1116, 3704
BslI	CCNNNNNNNGG	6 cut(s)	2415, 2780, 2965, 2966, 3242, 3369
BsmAI	GTCTC	3 cut(s)	1313, 2250, 3847
BsmBI	CGTCTC	1 cut(s)	3847
BsmFI	GGGAC	2 cut(s)	1116, 3704
BsmI	GAATGC	3 cut(s)	61, 1861, 3001
BsnI	GGCC	5 cut(s)	370, 390, 1364, 1528, 3875
BsoBI	CYCGRG	2 cut(s)	50, 3592
Bsp1286I	GDGCHC	3 cut(s)	2683, 3423, 3811
Bsp1407I	TGTACA	4 cut(s)	334, 505, 738, 3138
Bsp1720I	GCTNAGC	1 cut(s)	1911
Bsp19I	CCATGG	1 cut(s)	2305
BspANI	GGCC	5 cut(s)	370, 390, 1364, 1528, 3875
BspDI	ATCGAT	1 cut(s)	3473
BspFNI	CGCG	2 cut(s)	921, 3760
BspHI	TCATGA	3 cut(s)	834, 904, 3343
BspMAI	CTGCAG	2 cut(s)	349, 3130
BspOI	GCTAGC	1 cut(s)	344
BspT107I	GGYRCC	4 cut(s)	2494, 3078, 3306, 3806
BsrBI	CCGCTC	3 cut(s)	32, 664, 3769
BsrDI	GCAATG	2 cut(s)	24, 2660
BsrFI	RCCGGY	1 cut(s)	1528
BsrGI	TGTACA	4 cut(s)	334, 505, 738, 3138
BsrI	ACTGG	6 cut(s)	788, 1242, 1448, 1926, 3163, 3508
BssAI	RCCGGY	1 cut(s)	1528
BssECI	CCNNGG	7 cut(s)	1523, 1820, 2305, 2319, 2666, 2960, 3074
BssHII	GCGCGC	1 cut(s)	3758
BssSI	CACGAG	1 cut(s)	1785
BssT1I	CCWWGG	4 cut(s)	1523, 2305, 2666, 2960
Bst2BI	CACGAG	1 cut(s)	1785
Bst2UI	CCWGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
Bst6I	CTCTTC	3 cut(s)	2075, 3044, 3864
BstAPI	GCANNNNNTGC	3 cut(s)	242, 2947, 3125
BstAUI	TGTACA	4 cut(s)	334, 505, 738, 3138
BstBAI	YACGTR	2 cut(s)	102, 680
BstDSI	CCRYGG	1 cut(s)	2305
BstFNI	CGCG	2 cut(s)	921, 3760
BstHHI	GCGC	4 cut(s)	2261, 3760, 3762, 3791
BstMAI	GTCTC	3 cut(s)	1313, 2250, 3847
BstNI	CCWGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
BstNSI	RCATGY	4 cut(s)	2303, 2629, 3629, 3751
BstSCI	CCNGG	7 cut(s)	1338, 1609, 1820, 2318, 2977, 3073, 3438
BstSFI	CTRYAG	4 cut(s)	345, 1213, 2392, 3126
BstSLI	GKGCMC	1 cut(s)	3811
BstSNI	TACGTA	1 cut(s)	102
BstUI	CGCG	2 cut(s)	921, 3760
BstV1I	GCAGC	8 cut(s)	229, 331, 1531, 2051, 2585, 2698, 3112, 3749
BstV2I	GAAGAC	5 cut(s)	597, 875, 884, 3287, 3780
BstX2I	RGATCY	6 cut(s)	1410, 1475, 1741, 2251, 2323, 3130
BstYI	RGATCY	6 cut(s)	1410, 1475, 1741, 2251, 2323, 3130
Bsu15I	ATCGAT	1 cut(s)	3473
BsuRI	GGCC	5 cut(s)	370, 390, 1364, 1528, 3875
BsuTUI	ATCGAT	1 cut(s)	3473
BtgI	CCRYGG	1 cut(s)	2305
BtsI	GCAGTG	4 cut(s)	1289, 1555, 1590, 2118
CaiI	CAGNNNCTG	4 cut(s)	1589, 1724, 2254, 3125
CciI	TCATGA	3 cut(s)	834, 904, 3343
CfoI	GCGC	4 cut(s)	2261, 3760, 3762, 3791
Cfr10I	RCCGGY	1 cut(s)	1528
Cfr13I	GGNCC	6 cut(s)	389, 411, 1336, 1399, 1972, 3442
ClaI	ATCGAT	1 cut(s)	3473
CseI	GACGC	2 cut(s)	387, 2947
CsiI	ACCWGGT	1 cut(s)	3438
Csp6I	GTAC	8 cut(s)	335, 506, 739, 1202, 2504, 2556, 3139, 3307
CviQI	GTAC	8 cut(s)	335, 506, 739, 1202, 2504, 2556, 3139, 3307
EaeI	YGGCCR	1 cut(s)	1362
Eam1104I	CTCTTC	3 cut(s)	2075, 3044, 3864
EarI	CTCTTC	3 cut(s)	2075, 3044, 3864
EciI	GGCGGA	1 cut(s)	3030
Ecl136II	GAGCTC	1 cut(s)	3421
Eco105I	TACGTA	1 cut(s)	102
Eco130I	CCWWGG	4 cut(s)	1523, 2305, 2666, 2960
Eco147I	AGGCCT	2 cut(s)	370, 3875
Eco24I	GRGCYC	1 cut(s)	3423
Eco32I	GATATC	2 cut(s)	2290, 2914
Eco47I	GGWCC	5 cut(s)	411, 1336, 1399, 1972, 3442
Eco53kI	GAGCTC	1 cut(s)	3421
Eco57I	CTGAAG	1 cut(s)	2150
Eco88I	CYCGRG	2 cut(s)	50, 3592
EcoICRI	GAGCTC	1 cut(s)	3421
EcoO109I	RGGNCCY	2 cut(s)	1399, 3442
EcoRII	CCWGG	7 cut(s)	1338, 1609, 1820, 2318, 2977, 3073, 3438
EcoRV	GATATC	2 cut(s)	2290, 2914
EcoT14I	CCWWGG	4 cut(s)	1523, 2305, 2666, 2960
EcoT38I	GRGCYC	1 cut(s)	3423
ErhI	CCWWGG	4 cut(s)	1523, 2305, 2666, 2960
Esp3I	CGTCTC	1 cut(s)	3847
FalI	AAGNNNNNCTT	4 cut(s)	582, 614, 2805, 2837
FaqI	GGGAC	2 cut(s)	1116, 3704
FauI	CCCGC	3 cut(s)	926, 1852, 3774
FauNDI	CATATG	1 cut(s)	3673
FbaI	TGATCA	3 cut(s)	448, 765, 3606
FblI	GTMKAC	2 cut(s)	2398, 3528
FriOI	GRGCYC	1 cut(s)	3423
GlaI	GCGC	4 cut(s)	2260, 3759, 3761, 3790
GsaI	CCCAGC	2 cut(s)	2038, 2473
GsuI	CTGGAG	2 cut(s)	1632, 1865
HaeIII	GGCC	5 cut(s)	370, 390, 1364, 1528, 3875
HapII	CCGG	2 cut(s)	1529, 2191
HgaI	GACGC	2 cut(s)	387, 2947
HhaI	GCGC	4 cut(s)	2261, 3760, 3762, 3791
Hin6I	GCGC	4 cut(s)	2259, 3758, 3760, 3789
HinP1I	GCGC	4 cut(s)	2259, 3758, 3760, 3789
HincII	GTYRAC	1 cut(s)	3034
HindII	GTYRAC	1 cut(s)	3034
HindIII	AAGCTT	2 cut(s)	2000, 2745
HpaII	CCGG	2 cut(s)	1529, 2191
HphI	GGTGA	5 cut(s)	891, 1505, 2470, 3368, 3691
Hpy166II	GTNNAC	6 cut(s)	506, 1972, 2118, 2399, 3034, 3529
Hpy8I	GTNNAC	6 cut(s)	506, 1972, 2118, 2399, 3034, 3529
Hpy99I	CGWCG	2 cut(s)	381, 2941
HpyAV	CCTTC	9 cut(s)	52, 608, 1030, 1058, 1161, 1390, 1393, 3106, 3676
HpyCH4IV	ACGT	4 cut(s)	101, 679, 3263, 3450
HpySE526I	ACGT	4 cut(s)	101, 679, 3263, 3450
HspAI	GCGC	4 cut(s)	2259, 3758, 3760, 3789
KpnI	GGTACC	1 cut(s)	3310
Ksp22I	TGATCA	3 cut(s)	448, 765, 3606
LmnI	GCTCC	1 cut(s)	538
Lsp1109I	GCAGC	8 cut(s)	229, 331, 1531, 2051, 2585, 2698, 3112, 3749
MabI	ACCWGGT	1 cut(s)	3438
MaeII	ACGT	4 cut(s)	101, 679, 3263, 3450
MaeIII	GTNAC	7 cut(s)	397, 423, 1253, 1720, 2788, 3328, 3510
MbiI	CCGCTC	3 cut(s)	32, 664, 3769
MfeI	CAATTG	1 cut(s)	2634
MflI	RGATCY	6 cut(s)	1410, 1475, 1741, 2251, 2323, 3130
MhlI	GDGCHC	3 cut(s)	2683, 3423, 3811
MlsI	TGGCCA	1 cut(s)	1364
MluNI	TGGCCA	1 cut(s)	1364
MmeI	TCCRAC	4 cut(s)	1647, 2265, 3113, 3150
Mox20I	TGGCCA	1 cut(s)	1364
MroXI	GAANNNNTTC	4 cut(s)	485, 1068, 2859, 3858
MscI	TGGCCA	1 cut(s)	1364
MseI	TTAA	9 cut(s)	384, 777, 962, 1650, 2294, 2567, 2811, 3647, 3654
MslI	CAYNNNNRTG	2 cut(s)	437, 2304
Msp20I	TGGCCA	1 cut(s)	1364
MspA1I	CMGCKG	4 cut(s)	242, 1075, 1544, 3291
MspI	CCGG	2 cut(s)	1529, 2191
MspR9I	CCNGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
MunI	CAATTG	1 cut(s)	2634
Mva1269I	GAATGC	3 cut(s)	61, 1861, 3001
MvaI	CCWGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
MvnI	CGCG	2 cut(s)	921, 3760
NcoI	CCATGG	1 cut(s)	2305
NdeI	CATATG	1 cut(s)	3673
NheI	GCTAGC	1 cut(s)	340
NmuCI	GTSAC	2 cut(s)	1720, 2788
NspI	RCATGY	4 cut(s)	2303, 2629, 3629, 3751
OliI	CACNNNNGTG	1 cut(s)	437
PaeI	GCATGC	2 cut(s)	3629, 3751
PaeR7I	CTCGAG	2 cut(s)	50, 3592
PagI	TCATGA	3 cut(s)	834, 904, 3343
PauI	GCGCGC	1 cut(s)	3758
PceI	AGGCCT	2 cut(s)	370, 3875
PciI	ACATGT	1 cut(s)	2625
PcsI	WCGNNNNNNNCGW	1 cut(s)	3837
PctI	GAATGC	3 cut(s)	61, 1861, 3001
PdmI	GAANNNNTTC	4 cut(s)	485, 1068, 2859, 3858
PfeI	GAWTC	5 cut(s)	1642, 1692, 1778, 1904, 3359
PflMI	CCANNNNNTGG	1 cut(s)	3369
PfoI	TCCNGGA	1 cut(s)	1338
Ppu21I	YACGTR	2 cut(s)	102, 680
PpuMI	RGGWCCY	2 cut(s)	1399, 3442
PscI	ACATGT	1 cut(s)	2625
PshBI	ATTAAT	1 cut(s)	384
Psp124BI	GAGCTC	1 cut(s)	3423
Psp1406I	AACGTT	1 cut(s)	3450
Psp5II	RGGWCCY	2 cut(s)	1399, 3442
Psp6I	CCWGG	7 cut(s)	1338, 1609, 1820, 2318, 2977, 3073, 3438
PspFI	CCCAGC	2 cut(s)	2034, 2469
PspGI	CCWGG	7 cut(s)	1338, 1609, 1820, 2318, 2977, 3073, 3438
PspPI	GGNCC	6 cut(s)	389, 411, 1336, 1399, 1972, 3442
PspPPI	RGGWCCY	2 cut(s)	1399, 3442
PstI	CTGCAG	2 cut(s)	349, 3130
PstNI	CAGNNNCTG	4 cut(s)	1589, 1724, 2254, 3125
PsuI	RGATCY	6 cut(s)	1410, 1475, 1741, 2251, 2323, 3130
PteI	GCGCGC	1 cut(s)	3758
PvuII	CAGCTG	3 cut(s)	242, 1075, 1544
RsaI	GTAC	8 cut(s)	336, 507, 740, 1203, 2505, 2557, 3140, 3308
RsaNI	GTAC	8 cut(s)	335, 506, 739, 1202, 2504, 2556, 3139, 3307
RseI	CAYNNNNRTG	2 cut(s)	437, 2304
SacI	GAGCTC	1 cut(s)	3423
SaqAI	TTAA	9 cut(s)	384, 777, 962, 1650, 2294, 2567, 2811, 3647, 3654
Sau96I	GGNCC	6 cut(s)	389, 411, 1336, 1399, 1972, 3442
ScrFI	CCNGG	7 cut(s)	1340, 1611, 1822, 2320, 2979, 3075, 3440
SduI	GDGCHC	3 cut(s)	2683, 3423, 3811
SexAI	ACCWGGT	1 cut(s)	3438
SfcI	CTRYAG	4 cut(s)	345, 1213, 2392, 3126
Sfr274I	CTCGAG	2 cut(s)	50, 3592
SinI	GGWCC	5 cut(s)	411, 1336, 1399, 1972, 3442
SlaI	CTCGAG	2 cut(s)	50, 3592
SmiMI	CAYNNNNRTG	2 cut(s)	437, 2304
SmlI	CTYRAG	4 cut(s)	50, 1931, 3006, 3592
SmoI	CTYRAG	4 cut(s)	50, 1931, 3006, 3592
SnaBI	TACGTA	1 cut(s)	102
SphI	GCATGC	2 cut(s)	3629, 3751
SseBI	AGGCCT	2 cut(s)	370, 3875
SspI	AATATT	3 cut(s)	2096, 2218, 3212
SstI	GAGCTC	1 cut(s)	3423
StuI	AGGCCT	2 cut(s)	370, 3875
StyD4I	CCNGG	7 cut(s)	1338, 1609, 1820, 2318, 2977, 3073, 3438
StyI	CCWWGG	4 cut(s)	1523, 2305, 2666, 2960
TaiI	ACGT	4 cut(s)	104, 682, 3266, 3453
TatI	WGTACW	4 cut(s)	334, 505, 738, 3138
TauI	GCSGC	4 cut(s)	32, 248, 667, 3200
TfiI	GAWTC	5 cut(s)	1642, 1692, 1778, 1904, 3359
Tru1I	TTAA	9 cut(s)	384, 777, 962, 1650, 2294, 2567, 2811, 3647, 3654
Tru9I	TTAA	9 cut(s)	384, 777, 962, 1650, 2294, 2567, 2811, 3647, 3654
TseFI	GTSAC	2 cut(s)	1720, 2788
TseI	GCWGC	8 cut(s)	242, 344, 1544, 2039, 2573, 2711, 3125, 3762
Tsp45I	GTSAC	2 cut(s)	1720, 2788
TspGWI	ACGGA	3 cut(s)	1754, 2763, 3576
Van91I	CCANNNNNTGG	1 cut(s)	3369
VpaK11BI	GGWCC	5 cut(s)	411, 1336, 1399, 1972, 3442
VspI	ATTAAT	1 cut(s)	384
XapI	RAATTY	5 cut(s)	308, 991, 1766, 3300, 3569
XbaI	TCTAGA	3 cut(s)	172, 2654, 2686
XceI	RCATGY	4 cut(s)	2303, 2629, 3629, 3751
XhoI	CTCGAG	2 cut(s)	50, 3592
XmiI	GTMKAC	2 cut(s)	2398, 3528
XmnI	GAANNNNTTC	4 cut(s)	485, 1068, 2859, 3858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.