Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24310 |
| fragaria_vesca | FvH4_4g23970 |
| malus_domestica | MD13G1116800.v1.1 MD16G1117500.v1.1 |
| prunus_persica | Prupe.1G228700_v2.0.a1 |
| pyrus_communis | pycom13g10140 pycom16g10070 |
| rosa_chinensis | RchiOBHm_Chr4g0430621 |
| rosa_laevigata | RLG00000006962 |
| rosa_multiflora | Rmu_sc0000131.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00372370 |
| rosa_rugosa | Rorug04G0244800 |
| rosa_samantha | Rh4DG305500 |
| rosa_wichuraiana | Rw4G026100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1139 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 70 |
| AatII | GACGTC | 1 cut(s) | 188 |
| AccB1I | GGYRCC | 2 cut(s) | 89, 798 |
| AccI | GTMKAC | 3 cut(s) | 74, 101, 182 |
| AccII | CGCG | 1 cut(s) | 423 |
| AciI | CCGC | 5 cut(s) | 54, 297, 329, 338, 512 |
| AclWI | GGATC | 4 cut(s) | 503, 767, 928, 1027 |
| AcoI | YGGCCR | 1 cut(s) | 882 |
| AcsI | RAATTY | 1 cut(s) | 982 |
| AcuI | CTGAAG | 1 cut(s) | 674 |
| AcyI | GRCGYC | 4 cut(s) | 65, 185, 350, 799 |
| AfaI | GTAC | 3 cut(s) | 37, 592, 948 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 59, 60, 86, 113, 170, 808, 1129 |
| AgeI | ACCGGT | 1 cut(s) | 200 |
| AgsI | TTSAA | 7 cut(s) | 223, 431, 728, 740, 794, 916, 1111 |
| AjnI | CCWGG | 2 cut(s) | 460, 1015 |
| AluBI | AGCT | 9 cut(s) | 11, 574, 619, 658, 743, 896, 929, 934, 1085 |
| AluI | AGCT | 9 cut(s) | 11, 574, 619, 658, 743, 896, 929, 934, 1085 |
| Alw21I | GWGCWC | 1 cut(s) | 13 |
| Alw26I | GTCTC | 4 cut(s) | 397, 766, 1049, 1087 |
| AlwI | GGATC | 4 cut(s) | 503, 767, 928, 1027 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 686 |
| AoxI | GGCC | 4 cut(s) | 108, 165, 611, 882 |
| ApeKI | GCWGC | 9 cut(s) | 250, 259, 280, 331, 334, 340, 343, 896, 1049 |
| ApoI | RAATTY | 1 cut(s) | 982 |
| AsiGI | ACCGGT | 1 cut(s) | 200 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 672 |
| AspLEI | GCGC | 2 cut(s) | 606, 801 |
| AsuC2I | CCSGG | 2 cut(s) | 107, 1124 |
| AsuHPI | GGTGA | 4 cut(s) | 18, 535, 823, 881 |
| BanI | GGYRCC | 2 cut(s) | 89, 798 |
| BanII | GRGCYC | 2 cut(s) | 13, 317 |
| BbsI | GAAGAC | 1 cut(s) | 782 |
| Bbv12I | GWGCWC | 1 cut(s) | 13 |
| BbvCI | CCTCAGC | 1 cut(s) | 615 |
| BbvI | GCAGC | 9 cut(s) | 262, 271, 292, 343, 346, 352, 355, 883, 1036 |
| BccI | CCATC | 1 cut(s) | 376 |
| BceAI | ACGGC | 3 cut(s) | 25, 52, 253 |
| BciT130I | CCWGG | 2 cut(s) | 462, 1017 |
| BciVI | GTATCC | 1 cut(s) | 1144 |
| BcnI | CCSGG | 2 cut(s) | 107, 1124 |
| BcoDI | GTCTC | 4 cut(s) | 397, 766, 1049, 1087 |
| BfaI | CTAG | 4 cut(s) | 833, 906, 939, 1097 |
| BfmI | CTRYAG | 1 cut(s) | 897 |
| BfoI | RGCGCY | 2 cut(s) | 607, 802 |
| BfuI | GTATCC | 1 cut(s) | 1144 |
| BglII | AGATCT | 1 cut(s) | 637 |
| BlpI | GCTNAGC | 1 cut(s) | 930 |
| BmcAI | AGTACT | 1 cut(s) | 592 |
| Bme1390I | CCNGG | 4 cut(s) | 107, 462, 1017, 1124 |
| BmiI | GGNNCC | 6 cut(s) | 91, 156, 162, 214, 387, 800 |
| BmrFI | CCNGG | 4 cut(s) | 107, 462, 1017, 1124 |
| BmsI | GCATC | 3 cut(s) | 108, 673, 711 |
| BpiI | GAAGAC | 1 cut(s) | 782 |
| Bpu10I | CCTNAGC | 1 cut(s) | 615 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 930 |
| BpuMI | CCSGG | 2 cut(s) | 107, 1124 |
| BsaHI | GRCGYC | 4 cut(s) | 65, 185, 350, 799 |
| BsaJI | CCNNGG | 2 cut(s) | 105, 755 |
| BsaWI | WCCGGW | 1 cut(s) | 200 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 593, 623 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 59, 60, 86, 113, 170, 808, 1129 |
| Bse118I | RCCGGY | 1 cut(s) | 200 |
| Bse3DI | GCAATG | 2 cut(s) | 718, 1108 |
| BseBI | CCWGG | 2 cut(s) | 462, 1017 |
| BseDI | CCNNGG | 2 cut(s) | 105, 755 |
| BseGI | GGATG | 1 cut(s) | 123 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 59, 60, 86, 113, 170, 808, 1129 |
| BseMI | GCAATG | 2 cut(s) | 718, 1108 |
| BseMII | CTCAG | 6 cut(s) | 260, 299, 392, 629, 678, 921 |
| BseRI | GAGGAG | 1 cut(s) | 387 |
| BseXI | GCAGC | 9 cut(s) | 262, 271, 292, 343, 346, 352, 355, 883, 1036 |
| BseYI | CCCAGC | 1 cut(s) | 79 |
| Bsh1236I | CGCG | 1 cut(s) | 423 |
| Bsh1285I | CGRYCG | 1 cut(s) | 421 |
| BshFI | GGCC | 4 cut(s) | 110, 167, 613, 884 |
| BshNI | GGYRCC | 2 cut(s) | 89, 798 |
| BshTI | ACCGGT | 1 cut(s) | 200 |
| BsiEI | CGRYCG | 1 cut(s) | 421 |
| BsiHKAI | GWGCWC | 1 cut(s) | 13 |
| BsiSI | CCGG | 5 cut(s) | 107, 158, 164, 201, 1123 |
| BslFI | GGGAC | 1 cut(s) | 76 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 59, 60, 86, 113, 170, 808, 1129 |
| BsmAI | GTCTC | 4 cut(s) | 397, 766, 1049, 1087 |
| BsmBI | CGTCTC | 1 cut(s) | 397 |
| BsmFI | GGGAC | 1 cut(s) | 76 |
| BsnI | GGCC | 4 cut(s) | 110, 167, 613, 884 |
| Bsp1286I | GDGCHC | 2 cut(s) | 13, 317 |
| Bsp143I | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 930 |
| Bsp68I | TCGCGA | 1 cut(s) | 423 |
| BspACI | CCGC | 5 cut(s) | 54, 297, 329, 338, 512 |
| BspANI | GGCC | 4 cut(s) | 110, 167, 613, 884 |
| BspCNI | CTCAG | 6 cut(s) | 259, 298, 391, 628, 679, 922 |
| BspFNI | CGCG | 1 cut(s) | 423 |
| BspLI | GGNNCC | 6 cut(s) | 91, 156, 162, 214, 387, 800 |
| BspMAI | CTGCAG | 1 cut(s) | 901 |
| BspPI | GGATC | 4 cut(s) | 503, 767, 928, 1027 |
| BspT107I | GGYRCC | 2 cut(s) | 89, 798 |
| BsrDI | GCAATG | 2 cut(s) | 718, 1108 |
| BsrFI | RCCGGY | 1 cut(s) | 200 |
| BssAI | RCCGGY | 1 cut(s) | 200 |
| BssECI | CCNNGG | 2 cut(s) | 105, 755 |
| BssMI | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| BssNI | GRCGYC | 4 cut(s) | 65, 185, 350, 799 |
| BssT1I | CCWWGG | 1 cut(s) | 755 |
| Bst2UI | CCWGG | 2 cut(s) | 462, 1017 |
| Bst4CI | ACNGT | 1 cut(s) | 912 |
| Bst6I | CTCTTC | 2 cut(s) | 130, 241 |
| BstACI | GRCGYC | 4 cut(s) | 65, 185, 350, 799 |
| BstC8I | GCNNGC | 2 cut(s) | 295, 531 |
| BstDEI | CTNAG | 6 cut(s) | 246, 285, 378, 615, 687, 930 |
| BstF5I | GGATG | 1 cut(s) | 123 |
| BstFNI | CGCG | 1 cut(s) | 423 |
| BstH2I | RGCGCY | 2 cut(s) | 607, 802 |
| BstHHI | GCGC | 2 cut(s) | 606, 801 |
| BstKTI | GATC | 6 cut(s) | 421, 511, 640, 762, 923, 1022 |
| BstMAI | GTCTC | 4 cut(s) | 397, 766, 1049, 1087 |
| BstMBI | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| BstMCI | CGRYCG | 1 cut(s) | 421 |
| BstNI | CCWGG | 2 cut(s) | 462, 1017 |
| BstSCI | CCNGG | 4 cut(s) | 105, 460, 1015, 1122 |
| BstSFI | CTRYAG | 1 cut(s) | 897 |
| BstUI | CGCG | 1 cut(s) | 423 |
| BstV1I | GCAGC | 9 cut(s) | 262, 271, 292, 343, 346, 352, 355, 883, 1036 |
| BstV2I | GAAGAC | 1 cut(s) | 782 |
| BstX2I | RGATCY | 1 cut(s) | 637 |
| BstYI | RGATCY | 1 cut(s) | 637 |
| BsuI | GTATCC | 1 cut(s) | 1144 |
| BsuRI | GGCC | 4 cut(s) | 110, 167, 613, 884 |
| BtsCI | GGATG | 1 cut(s) | 123 |
| BtuMI | TCGCGA | 1 cut(s) | 423 |
| Cac8I | GCNNGC | 2 cut(s) | 295, 531 |
| CaiI | CAGNNNCTG | 1 cut(s) | 686 |
| CfoI | GCGC | 2 cut(s) | 606, 801 |
| Cfr10I | RCCGGY | 1 cut(s) | 200 |
| CseI | GACGC | 3 cut(s) | 73, 358, 452 |
| Csp6I | GTAC | 3 cut(s) | 36, 591, 947 |
| CspAI | ACCGGT | 1 cut(s) | 200 |
| CviAII | CATG | 1 cut(s) | 1034 |
| CviQI | GTAC | 3 cut(s) | 36, 591, 947 |
| DdeI | CTNAG | 6 cut(s) | 246, 285, 378, 615, 687, 930 |
| DinI | GGCGCC | 1 cut(s) | 800 |
| DpnI | GATC | 6 cut(s) | 420, 510, 639, 761, 922, 1021 |
| DpnII | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| DraI | TTTAAA | 1 cut(s) | 634 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 70 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 70 |
| EaeI | YGGCCR | 1 cut(s) | 882 |
| Eam1104I | CTCTTC | 2 cut(s) | 130, 241 |
| EarI | CTCTTC | 2 cut(s) | 130, 241 |
| Ecl136II | GAGCTC | 1 cut(s) | 11 |
| Eco130I | CCWWGG | 1 cut(s) | 755 |
| Eco24I | GRGCYC | 2 cut(s) | 13, 317 |
| Eco32I | GATATC | 1 cut(s) | 1120 |
| Eco53kI | GAGCTC | 1 cut(s) | 11 |
| Eco57I | CTGAAG | 1 cut(s) | 674 |
| EcoICRI | GAGCTC | 1 cut(s) | 11 |
| EcoRI | GAATTC | 1 cut(s) | 982 |
| EcoRII | CCWGG | 2 cut(s) | 460, 1015 |
| EcoRV | GATATC | 1 cut(s) | 1120 |
| EcoT14I | CCWWGG | 1 cut(s) | 755 |
| EcoT38I | GRGCYC | 2 cut(s) | 13, 317 |
| EgeI | GGCGCC | 1 cut(s) | 800 |
| EheI | GGCGCC | 1 cut(s) | 800 |
| ErhI | CCWWGG | 1 cut(s) | 755 |
| Esp3I | CGTCTC | 1 cut(s) | 397 |
| FaeI | CATG | 1 cut(s) | 1037 |
| FaiI | YATR | 8 cut(s) | 477, 551, 566, 965, 1035, 1055, 1130, 1139 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 660, 692 |
| FaqI | GGGAC | 1 cut(s) | 76 |
| FatI | CATG | 1 cut(s) | 1033 |
| FauI | CCCGC | 1 cut(s) | 61 |
| FblI | GTMKAC | 3 cut(s) | 74, 101, 182 |
| FokI | GGATG | 1 cut(s) | 130 |
| FriOI | GRGCYC | 2 cut(s) | 13, 317 |
| FspBI | CTAG | 4 cut(s) | 833, 906, 939, 1097 |
| GlaI | GCGC | 2 cut(s) | 605, 800 |
| GsaI | CCCAGC | 1 cut(s) | 83 |
| HaeII | RGCGCY | 2 cut(s) | 607, 802 |
| HaeIII | GGCC | 4 cut(s) | 110, 167, 613, 884 |
| HapII | CCGG | 5 cut(s) | 107, 158, 164, 201, 1123 |
| HgaI | GACGC | 3 cut(s) | 73, 358, 452 |
| HhaI | GCGC | 2 cut(s) | 606, 801 |
| Hin1I | GRCGYC | 4 cut(s) | 65, 185, 350, 799 |
| Hin1II | CATG | 1 cut(s) | 1037 |
| Hin6I | GCGC | 2 cut(s) | 604, 799 |
| HinP1I | GCGC | 2 cut(s) | 604, 799 |
| HincII | GTYRAC | 5 cut(s) | 48, 75, 102, 183, 442 |
| HindII | GTYRAC | 5 cut(s) | 48, 75, 102, 183, 442 |
| HinfI | GANTC | 2 cut(s) | 376, 1042 |
| HpaII | CCGG | 5 cut(s) | 107, 158, 164, 201, 1123 |
| HphI | GGTGA | 4 cut(s) | 18, 535, 823, 881 |
| Hpy166II | GTNNAC | 6 cut(s) | 48, 75, 102, 183, 321, 442 |
| Hpy188I | TCNGA | 6 cut(s) | 8, 312, 381, 544, 682, 851 |
| Hpy188III | TCNNGA | 5 cut(s) | 61, 422, 584, 718, 924 |
| Hpy8I | GTNNAC | 6 cut(s) | 48, 75, 102, 183, 321, 442 |
| HpyAV | CCTTC | 7 cut(s) | 67, 94, 159, 364, 572, 683, 859 |
| HpyCH4III | ACNGT | 1 cut(s) | 912 |
| HpyCH4IV | ACGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 5 cut(s) | 191, 697, 899, 1057, 1069 |
| HpyF3I | CTNAG | 6 cut(s) | 246, 285, 378, 615, 687, 930 |
| HpySE526I | ACGT | 1 cut(s) | 185 |
| Hsp92I | GRCGYC | 4 cut(s) | 65, 185, 350, 799 |
| Hsp92II | CATG | 1 cut(s) | 1037 |
| HspAI | GCGC | 2 cut(s) | 604, 799 |
| KasI | GGCGCC | 1 cut(s) | 798 |
| Kzo9I | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| LmnI | GCTCC | 7 cut(s) | 8, 160, 166, 218, 391, 601, 663 |
| Lsp1109I | GCAGC | 9 cut(s) | 262, 271, 292, 343, 346, 352, 355, 883, 1036 |
| LweI | GCATC | 3 cut(s) | 108, 673, 711 |
| MaeI | CTAG | 4 cut(s) | 833, 906, 939, 1097 |
| MaeII | ACGT | 1 cut(s) | 185 |
| MaeIII | GTNAC | 3 cut(s) | 24, 502, 901 |
| MalI | GATC | 6 cut(s) | 420, 510, 639, 761, 922, 1021 |
| MboI | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| MboII | GAAGA | 5 cut(s) | 9, 117, 228, 782, 1004 |
| MfeI | CAATTG | 2 cut(s) | 368, 435 |
| MflI | RGATCY | 1 cut(s) | 637 |
| MhlI | GDGCHC | 2 cut(s) | 13, 317 |
| MluCI | AATT | 4 cut(s) | 368, 435, 878, 982 |
| Mly113I | GGCGCC | 1 cut(s) | 799 |
| MlyI | GAGTC | 2 cut(s) | 370, 1051 |
| MmeI | TCCRAC | 1 cut(s) | 874 |
| MroXI | GAANNNNTTC | 1 cut(s) | 672 |
| MseI | TTAA | 3 cut(s) | 483, 633, 860 |
| MspI | CCGG | 5 cut(s) | 107, 158, 164, 201, 1123 |
| MspR9I | CCNGG | 4 cut(s) | 107, 462, 1017, 1124 |
| MunI | CAATTG | 2 cut(s) | 368, 435 |
| MvaI | CCWGG | 2 cut(s) | 462, 1017 |
| MvnI | CGCG | 1 cut(s) | 423 |
| NarI | GGCGCC | 1 cut(s) | 799 |
| NciI | CCSGG | 2 cut(s) | 107, 1124 |
| NdeII | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| NlaIII | CATG | 1 cut(s) | 1037 |
| NlaIV | GGNNCC | 6 cut(s) | 91, 156, 162, 214, 387, 800 |
| NmeAIII | GCCGAG | 1 cut(s) | 910 |
| NmuCI | GTSAC | 1 cut(s) | 24 |
| NruI | TCGCGA | 1 cut(s) | 423 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 71, 134, 420 |
| PdmI | GAANNNNTTC | 1 cut(s) | 672 |
| PflFI | GACNNNGTC | 2 cut(s) | 67, 133 |
| PfoI | TCCNGGA | 2 cut(s) | 1015, 1122 |
| PinAI | ACCGGT | 1 cut(s) | 200 |
| Ple19I | CGATCG | 1 cut(s) | 421 |
| PleI | GAGTC | 2 cut(s) | 370, 1050 |
| PluTI | GGCGCC | 1 cut(s) | 802 |
| PpsI | GAGTC | 2 cut(s) | 370, 1050 |
| PsiI | TTATAA | 1 cut(s) | 1139 |
| Psp124BI | GAGCTC | 1 cut(s) | 13 |
| Psp6I | CCWGG | 2 cut(s) | 460, 1015 |
| PspFI | CCCAGC | 1 cut(s) | 79 |
| PspGI | CCWGG | 2 cut(s) | 460, 1015 |
| PspN4I | GGNNCC | 6 cut(s) | 91, 156, 162, 214, 387, 800 |
| PstI | CTGCAG | 1 cut(s) | 901 |
| PstNI | CAGNNNCTG | 1 cut(s) | 686 |
| PsuI | RGATCY | 1 cut(s) | 637 |
| PsyI | GACNNNGTC | 2 cut(s) | 67, 133 |
| PvuI | CGATCG | 1 cut(s) | 421 |
| RruI | TCGCGA | 1 cut(s) | 423 |
| RsaI | GTAC | 3 cut(s) | 37, 592, 948 |
| RsaNI | GTAC | 3 cut(s) | 36, 591, 947 |
| SacI | GAGCTC | 1 cut(s) | 13 |
| SalI | GTCGAC | 3 cut(s) | 73, 100, 181 |
| SaqAI | TTAA | 3 cut(s) | 483, 633, 860 |
| Sau3AI | GATC | 6 cut(s) | 418, 508, 637, 759, 920, 1019 |
| ScaI | AGTACT | 1 cut(s) | 592 |
| SchI | GAGTC | 2 cut(s) | 370, 1051 |
| ScrFI | CCNGG | 4 cut(s) | 107, 462, 1017, 1124 |
| SduI | GDGCHC | 2 cut(s) | 13, 317 |
| SfaNI | GCATC | 3 cut(s) | 108, 673, 711 |
| SfcI | CTRYAG | 1 cut(s) | 897 |
| SfoI | GGCGCC | 1 cut(s) | 800 |
| SgrAI | CRCCGGYG | 1 cut(s) | 200 |
| SgrDI | CGTCGACG | 1 cut(s) | 181 |
| Sse9I | AATT | 4 cut(s) | 368, 435, 878, 982 |
| SsiI | CCGC | 5 cut(s) | 54, 297, 329, 338, 512 |
| SspDI | GGCGCC | 1 cut(s) | 798 |
| SspMI | CTAG | 4 cut(s) | 833, 906, 939, 1097 |
| SstI | GAGCTC | 1 cut(s) | 13 |
| StyD4I | CCNGG | 4 cut(s) | 105, 460, 1015, 1122 |
| StyI | CCWWGG | 1 cut(s) | 755 |
| TaaI | ACNGT | 1 cut(s) | 912 |
| TaiI | ACGT | 1 cut(s) | 188 |
| TaqI | TCGA | 7 cut(s) | 74, 101, 128, 182, 576, 762, 923 |
| TasI | AATT | 4 cut(s) | 368, 435, 878, 982 |
| TatI | WGTACW | 1 cut(s) | 590 |
| TauI | GCSGC | 3 cut(s) | 300, 331, 340 |
| Tru1I | TTAA | 3 cut(s) | 483, 633, 860 |
| Tru9I | TTAA | 3 cut(s) | 483, 633, 860 |
| TseFI | GTSAC | 1 cut(s) | 24 |
| TseI | GCWGC | 9 cut(s) | 250, 259, 280, 331, 334, 340, 343, 896, 1049 |
| Tsp45I | GTSAC | 1 cut(s) | 24 |
| TspDTI | ATGAA | 3 cut(s) | 681, 878, 1050 |
| TspGWI | ACGGA | 2 cut(s) | 168, 1094 |
| Tth111I | GACNNNGTC | 2 cut(s) | 67, 133 |
| XapI | RAATTY | 1 cut(s) | 982 |
| XmiI | GTMKAC | 3 cut(s) | 74, 101, 182 |
| XmnI | GAANNNNTTC | 1 cut(s) | 672 |
| XspI | CTAG | 4 cut(s) | 833, 906, 939, 1097 |
| ZraI | GACGTC | 1 cut(s) | 186 |
| ZrmI | AGTACT | 1 cut(s) | 592 |