Nuclear pore complex protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 602, 1055 |
| Acc65I | GGTACC | 1 cut(s) | 1144 |
| AccB1I | GGYRCC | 2 cut(s) | 1144, 1408 |
| AccII | CGCG | 1 cut(s) | 744 |
| AccIII | TCCGGA | 1 cut(s) | 821 |
| AciI | CCGC | 2 cut(s) | 338, 744 |
| AclWI | GGATC | 5 cut(s) | 208, 255, 481, 564, 577 |
| AcoI | YGGCCR | 1 cut(s) | 703 |
| AcsI | RAATTY | 2 cut(s) | 10, 1440 |
| AfaI | GTAC | 2 cut(s) | 136, 1146 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 687, 821, 1396 |
| AflII | CTTAAG | 1 cut(s) | 1115 |
| AflIII | ACRYGT | 2 cut(s) | 167, 1359 |
| AgsI | TTSAA | 5 cut(s) | 144, 842, 893, 944, 1486 |
| Alw26I | GTCTC | 3 cut(s) | 1039, 1312, 1409 |
| AlwI | GGATC | 5 cut(s) | 208, 255, 481, 564, 577 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1070 |
| Ama87I | CYCGRG | 1 cut(s) | 674 |
| Aor13HI | TCCGGA | 1 cut(s) | 821 |
| AoxI | GGCC | 1 cut(s) | 703 |
| ApeKI | GCWGC | 2 cut(s) | 1132, 1259 |
| ApoI | RAATTY | 2 cut(s) | 10, 1440 |
| AseI | ATTAAT | 1 cut(s) | 909 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 716, 1440 |
| Asp718I | GGTACC | 1 cut(s) | 1144 |
| AspA2I | CCTAGG | 1 cut(s) | 1081 |
| AspS9I | GGNCC | 1 cut(s) | 997 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 874, 1231 |
| AsuNHI | GCTAGC | 1 cut(s) | 400 |
| AvaI | CYCGRG | 1 cut(s) | 674 |
| AvaII | GGWCC | 1 cut(s) | 997 |
| AvrII | CCTAGG | 1 cut(s) | 1081 |
| BalI | TGGCCA | 1 cut(s) | 705 |
| BamHI | GGATCC | 1 cut(s) | 569 |
| BanI | GGYRCC | 2 cut(s) | 1144, 1408 |
| BbvI | GCAGC | 2 cut(s) | 1119, 1246 |
| BccI | CCATC | 6 cut(s) | 122, 145, 390, 413, 681, 877 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 722, 756 |
| BcoDI | GTCTC | 3 cut(s) | 1039, 1312, 1409 |
| BfaI | CTAG | 7 cut(s) | 263, 401, 617, 684, 1082, 1094, 1433 |
| BfmI | CTRYAG | 2 cut(s) | 621, 1008 |
| BfrI | CTTAAG | 1 cut(s) | 1115 |
| BglII | AGATCT | 1 cut(s) | 1233 |
| BisI | GCNGC | 2 cut(s) | 1133, 1260 |
| BlnI | CCTAGG | 1 cut(s) | 1081 |
| BlpI | GCTNAGC | 1 cut(s) | 161 |
| BlsI | GCNGC | 2 cut(s) | 1134, 1261 |
| BmcAI | AGTACT | 1 cut(s) | 136 |
| Bme18I | GGWCC | 1 cut(s) | 997 |
| BmeT110I | CYCGRG | 1 cut(s) | 674 |
| BmgT120I | GGNCC | 1 cut(s) | 997 |
| BmiI | GGNNCC | 6 cut(s) | 58, 571, 973, 999, 1146, 1410 |
| BmsI | GCATC | 2 cut(s) | 103, 1461 |
| BmtI | GCTAGC | 1 cut(s) | 404 |
| BpmI | CTGGAG | 1 cut(s) | 1357 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 161 |
| BpuEI | CTTGAG | 3 cut(s) | 89, 943, 1330 |
| Bsa29I | ATCGAT | 1 cut(s) | 1029 |
| BsaBI | GATNNNNATC | 1 cut(s) | 252 |
| BsaI | GGTCTC | 2 cut(s) | 1039, 1409 |
| BsaJI | CCNNGG | 3 cut(s) | 526, 1081, 1214 |
| BsaWI | WCCGGW | 1 cut(s) | 821 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 687, 821, 1396 |
| Bse1I | ACTGG | 5 cut(s) | 142, 460, 571, 1075, 1292 |
| Bse3DI | GCAATG | 4 cut(s) | 312, 369, 1026, 1179 |
| Bse8I | GATNNNNATC | 1 cut(s) | 252 |
| BseAI | TCCGGA | 1 cut(s) | 821 |
| BseCI | ATCGAT | 1 cut(s) | 1029 |
| BseDI | CCNNGG | 3 cut(s) | 526, 1081, 1214 |
| BseGI | GGATG | 2 cut(s) | 156, 401 |
| BseJI | GATNNNNATC | 1 cut(s) | 252 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 687, 821, 1396 |
| BseMI | GCAATG | 4 cut(s) | 312, 369, 1026, 1179 |
| BseMII | CTCAG | 3 cut(s) | 281, 408, 1221 |
| BseNI | ACTGG | 5 cut(s) | 142, 460, 571, 1075, 1292 |
| BseXI | GCAGC | 2 cut(s) | 1119, 1246 |
| BseYI | CCCAGC | 1 cut(s) | 310 |
| BsgI | GTGCAG | 1 cut(s) | 55 |
| Bsh1236I | CGCG | 1 cut(s) | 744 |
| BshFI | GGCC | 1 cut(s) | 705 |
| BshNI | GGYRCC | 2 cut(s) | 1144, 1408 |
| BshVI | ATCGAT | 1 cut(s) | 1029 |
| BsiHKCI | CYCGRG | 1 cut(s) | 674 |
| BsiSI | CCGG | 1 cut(s) | 822 |
| BslFI | GGGAC | 2 cut(s) | 664, 983 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 687, 821, 1396 |
| BsmAI | GTCTC | 3 cut(s) | 1039, 1312, 1409 |
| BsmFI | GGGAC | 2 cut(s) | 664, 983 |
| BsnI | GGCC | 1 cut(s) | 705 |
| Bso31I | GGTCTC | 2 cut(s) | 1039, 1409 |
| BsoBI | CYCGRG | 1 cut(s) | 674 |
| Bsp13I | TCCGGA | 1 cut(s) | 821 |
| Bsp143I | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 161 |
| BspACI | CCGC | 2 cut(s) | 338, 744 |
| BspANI | GGCC | 1 cut(s) | 705 |
| BspCNI | CTCAG | 3 cut(s) | 280, 409, 1222 |
| BspDI | ATCGAT | 1 cut(s) | 1029 |
| BspEI | TCCGGA | 1 cut(s) | 821 |
| BspFNI | CGCG | 1 cut(s) | 744 |
| BspHI | TCATGA | 1 cut(s) | 555 |
| BspLI | GGNNCC | 6 cut(s) | 58, 571, 973, 999, 1146, 1410 |
| BspOI | GCTAGC | 1 cut(s) | 404 |
| BspPI | GGATC | 5 cut(s) | 208, 255, 481, 564, 577 |
| BspT107I | GGYRCC | 2 cut(s) | 1144, 1408 |
| BspTI | CTTAAG | 1 cut(s) | 1115 |
| BspTNI | GGTCTC | 2 cut(s) | 1039, 1409 |
| BsrDI | GCAATG | 4 cut(s) | 312, 369, 1026, 1179 |
| BsrI | ACTGG | 5 cut(s) | 142, 460, 571, 1075, 1292 |
| BssECI | CCNNGG | 3 cut(s) | 526, 1081, 1214 |
| BssMI | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| BssT1I | CCWWGG | 2 cut(s) | 1081, 1214 |
| Bst4CI | ACNGT | 2 cut(s) | 897, 1009 |
| Bst6I | CTCTTC | 1 cut(s) | 1462 |
| BstAFI | CTTAAG | 1 cut(s) | 1115 |
| BstC8I | GCNNGC | 3 cut(s) | 402, 693, 1450 |
| BstDEI | CTNAG | 5 cut(s) | 161, 267, 417, 1230, 1270 |
| BstDSI | CCRYGG | 1 cut(s) | 526 |
| BstF5I | GGATG | 2 cut(s) | 156, 401 |
| BstFNI | CGCG | 1 cut(s) | 744 |
| BstKTI | GATC | 5 cut(s) | 203, 250, 489, 572, 1236 |
| BstMAI | GTCTC | 3 cut(s) | 1039, 1312, 1409 |
| BstMBI | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 509 |
| BstNSI | RCATGY | 5 cut(s) | 171, 373, 990, 1363, 1452 |
| BstSFI | CTRYAG | 2 cut(s) | 621, 1008 |
| BstUI | CGCG | 1 cut(s) | 744 |
| BstV1I | GCAGC | 2 cut(s) | 1119, 1246 |
| BstX2I | RGATCY | 3 cut(s) | 247, 569, 1233 |
| BstYI | RGATCY | 3 cut(s) | 247, 569, 1233 |
| Bsu15I | ATCGAT | 1 cut(s) | 1029 |
| BsuRI | GGCC | 1 cut(s) | 705 |
| BsuTUI | ATCGAT | 1 cut(s) | 1029 |
| BtgI | CCRYGG | 1 cut(s) | 526 |
| BtsCI | GGATG | 2 cut(s) | 156, 401 |
| BtsI | GCAGTG | 2 cut(s) | 38, 728 |
| BtsIMutI | CAGTG | 2 cut(s) | 38, 728 |
| Cac8I | GCNNGC | 3 cut(s) | 402, 693, 1450 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1070 |
| CciI | TCATGA | 1 cut(s) | 555 |
| Cfr13I | GGNCC | 1 cut(s) | 997 |
| ClaI | ATCGAT | 1 cut(s) | 1029 |
| Csp6I | GTAC | 2 cut(s) | 135, 1145 |
| CviQI | GTAC | 2 cut(s) | 135, 1145 |
| DdeI | CTNAG | 5 cut(s) | 161, 267, 417, 1230, 1270 |
| DpnI | GATC | 5 cut(s) | 202, 249, 488, 571, 1235 |
| DpnII | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| EaeI | YGGCCR | 1 cut(s) | 703 |
| Eam1104I | CTCTTC | 1 cut(s) | 1462 |
| EarI | CTCTTC | 1 cut(s) | 1462 |
| Eco130I | CCWWGG | 2 cut(s) | 1081, 1214 |
| Eco31I | GGTCTC | 2 cut(s) | 1039, 1409 |
| Eco32I | GATATC | 1 cut(s) | 1480 |
| Eco47I | GGWCC | 1 cut(s) | 997 |
| Eco88I | CYCGRG | 1 cut(s) | 674 |
| EcoO109I | RGGNCCY | 1 cut(s) | 997 |
| EcoRV | GATATC | 1 cut(s) | 1480 |
| EcoT14I | CCWWGG | 2 cut(s) | 1081, 1214 |
| EcoT22I | ATGCAT | 2 cut(s) | 988, 1454 |
| ErhI | CCWWGG | 2 cut(s) | 1081, 1214 |
| FaqI | GGGAC | 2 cut(s) | 664, 983 |
| Fnu4HI | GCNGC | 2 cut(s) | 1133, 1260 |
| FokI | GGATG | 2 cut(s) | 163, 408 |
| Fsp4HI | GCNGC | 2 cut(s) | 1133, 1260 |
| FspBI | CTAG | 7 cut(s) | 263, 401, 617, 684, 1082, 1094, 1433 |
| GluI | GCNGC | 2 cut(s) | 1133, 1260 |
| GsaI | CCCAGC | 1 cut(s) | 314 |
| GsuI | CTGGAG | 1 cut(s) | 1357 |
| HaeIII | GGCC | 1 cut(s) | 705 |
| HapII | CCGG | 1 cut(s) | 822 |
| HincII | GTYRAC | 1 cut(s) | 1383 |
| HindII | GTYRAC | 1 cut(s) | 1383 |
| HinfI | GANTC | 4 cut(s) | 630, 677, 921, 1371 |
| HpaII | CCGG | 1 cut(s) | 822 |
| HphI | GGTGA | 3 cut(s) | 16, 874, 1231 |
| Hpy166II | GTNNAC | 2 cut(s) | 1285, 1383 |
| Hpy188I | TCNGA | 6 cut(s) | 200, 418, 766, 1199, 1231, 1462 |
| Hpy188III | TCNNGA | 9 cut(s) | 68, 556, 674, 822, 1038, 1171, 1347, 1368, 1483 |
| Hpy8I | GTNNAC | 2 cut(s) | 1285, 1383 |
| HpyAV | CCTTC | 4 cut(s) | 438, 644, 821, 1035 |
| HpyCH4III | ACNGT | 2 cut(s) | 897, 1009 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 509 |
| HpyF3I | CTNAG | 5 cut(s) | 161, 267, 417, 1230, 1270 |
| Kpn2I | TCCGGA | 1 cut(s) | 821 |
| KpnI | GGTACC | 1 cut(s) | 1148 |
| Kzo9I | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| LmnI | GCTCC | 4 cut(s) | 422, 1016, 1205, 1256 |
| Lsp1109I | GCAGC | 2 cut(s) | 1119, 1246 |
| LweI | GCATC | 2 cut(s) | 103, 1461 |
| MaeI | CTAG | 7 cut(s) | 263, 401, 617, 684, 1082, 1094, 1433 |
| MaeIII | GTNAC | 3 cut(s) | 429, 562, 796 |
| MalI | GATC | 5 cut(s) | 202, 249, 488, 571, 1235 |
| MboI | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| MboII | GAAGA | 6 cut(s) | 115, 118, 137, 956, 1448, 1479 |
| MfeI | CAATTG | 2 cut(s) | 24, 144 |
| MflI | RGATCY | 3 cut(s) | 247, 569, 1233 |
| MlsI | TGGCCA | 1 cut(s) | 705 |
| MluCI | AATT | 8 cut(s) | 10, 24, 144, 465, 597, 966, 1002, 1440 |
| MluNI | TGGCCA | 1 cut(s) | 705 |
| MlyI | GAGTC | 1 cut(s) | 686 |
| MmeI | TCCRAC | 3 cut(s) | 587, 810, 856 |
| MnlI | CCTC | 9 cut(s) | 64, 238, 412, 524, 583, 603, 896, 1059, 1354 |
| Mox20I | TGGCCA | 1 cut(s) | 705 |
| Mph1103I | ATGCAT | 2 cut(s) | 988, 1454 |
| MroI | TCCGGA | 1 cut(s) | 821 |
| MroXI | GAANNNNTTC | 2 cut(s) | 716, 1440 |
| MscI | TGGCCA | 1 cut(s) | 705 |
| MseI | TTAA | 5 cut(s) | 452, 545, 909, 1116, 1137 |
| Msp20I | TGGCCA | 1 cut(s) | 705 |
| MspA1I | CMGCKG | 1 cut(s) | 776 |
| MspCI | CTTAAG | 1 cut(s) | 1115 |
| MspI | CCGG | 1 cut(s) | 822 |
| MunI | CAATTG | 2 cut(s) | 24, 144 |
| MvnI | CGCG | 1 cut(s) | 744 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 509 |
| NdeII | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| NheI | GCTAGC | 1 cut(s) | 400 |
| NlaIV | GGNNCC | 6 cut(s) | 58, 571, 973, 999, 1146, 1410 |
| NmuCI | GTSAC | 2 cut(s) | 429, 796 |
| NsiI | ATGCAT | 2 cut(s) | 988, 1454 |
| NspI | RCATGY | 5 cut(s) | 171, 373, 990, 1363, 1452 |
| PaeI | GCATGC | 1 cut(s) | 1452 |
| PagI | TCATGA | 1 cut(s) | 555 |
| PciI | ACATGT | 2 cut(s) | 167, 1359 |
| PdmI | GAANNNNTTC | 2 cut(s) | 716, 1440 |
| PfeI | GAWTC | 3 cut(s) | 630, 921, 1371 |
| PkrI | GCNGC | 2 cut(s) | 1134, 1261 |
| PleI | GAGTC | 1 cut(s) | 685 |
| PpsI | GAGTC | 1 cut(s) | 685 |
| PpuMI | RGGWCCY | 1 cut(s) | 997 |
| PscI | ACATGT | 2 cut(s) | 167, 1359 |
| PshBI | ATTAAT | 1 cut(s) | 909 |
| PsiI | TTATAA | 2 cut(s) | 602, 1055 |
| Psp5II | RGGWCCY | 1 cut(s) | 997 |
| PspFI | CCCAGC | 1 cut(s) | 310 |
| PspN4I | GGNNCC | 6 cut(s) | 58, 571, 973, 999, 1146, 1410 |
| PspPI | GGNCC | 1 cut(s) | 997 |
| PspPPI | RGGWCCY | 1 cut(s) | 997 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 124, 156 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1070 |
| PsuI | RGATCY | 3 cut(s) | 247, 569, 1233 |
| PvuII | CAGCTG | 1 cut(s) | 776 |
| RsaI | GTAC | 2 cut(s) | 136, 1146 |
| RsaNI | GTAC | 2 cut(s) | 135, 1145 |
| SaqAI | TTAA | 5 cut(s) | 452, 545, 909, 1116, 1137 |
| SatI | GCNGC | 2 cut(s) | 1133, 1260 |
| Sau3AI | GATC | 5 cut(s) | 200, 247, 486, 569, 1233 |
| Sau96I | GGNCC | 1 cut(s) | 997 |
| ScaI | AGTACT | 1 cut(s) | 136 |
| SchI | GAGTC | 1 cut(s) | 686 |
| SfaNI | GCATC | 2 cut(s) | 103, 1461 |
| SfcI | CTRYAG | 2 cut(s) | 621, 1008 |
| SinI | GGWCC | 1 cut(s) | 997 |
| SmlI | CTYRAG | 4 cut(s) | 68, 958, 1115, 1345 |
| SmoI | CTYRAG | 4 cut(s) | 68, 958, 1115, 1345 |
| SphI | GCATGC | 1 cut(s) | 1452 |
| Sse9I | AATT | 8 cut(s) | 10, 24, 144, 465, 597, 966, 1002, 1440 |
| SsiI | CCGC | 2 cut(s) | 338, 744 |
| SspI | AATATT | 1 cut(s) | 495 |
| SspMI | CTAG | 7 cut(s) | 263, 401, 617, 684, 1082, 1094, 1433 |
| StyI | CCWWGG | 2 cut(s) | 1081, 1214 |
| TaaI | ACNGT | 2 cut(s) | 897, 1009 |
| TaqI | TCGA | 3 cut(s) | 192, 352, 1029 |
| TasI | AATT | 8 cut(s) | 10, 24, 144, 465, 597, 966, 1002, 1440 |
| TatI | WGTACW | 1 cut(s) | 134 |
| TfiI | GAWTC | 3 cut(s) | 630, 921, 1371 |
| Tru1I | TTAA | 5 cut(s) | 452, 545, 909, 1116, 1137 |
| Tru9I | TTAA | 5 cut(s) | 452, 545, 909, 1116, 1137 |
| TscAI | CASTG | 2 cut(s) | 38, 735 |
| TseFI | GTSAC | 2 cut(s) | 429, 796 |
| TseI | GCWGC | 2 cut(s) | 1132, 1259 |
| Tsp45I | GTSAC | 2 cut(s) | 429, 796 |
| TspDTI | ATGAA | 3 cut(s) | 138, 570, 783 |
| TspGWI | ACGGA | 1 cut(s) | 515 |
| TspRI | CASTG | 2 cut(s) | 38, 735 |
| Vha464I | CTTAAG | 1 cut(s) | 1115 |
| VpaK11BI | GGWCC | 1 cut(s) | 997 |
| VspI | ATTAAT | 1 cut(s) | 909 |
| XapI | RAATTY | 2 cut(s) | 10, 1440 |
| XceI | RCATGY | 5 cut(s) | 171, 373, 990, 1363, 1452 |
| XmaJI | CCTAGG | 1 cut(s) | 1081 |
| XmnI | GAANNNNTTC | 2 cut(s) | 716, 1440 |
| XspI | CTAG | 7 cut(s) | 263, 401, 617, 684, 1082, 1094, 1433 |
| ZrmI | AGTACT | 1 cut(s) | 136 |
| Zsp2I | ATGCAT | 2 cut(s) | 988, 1454 |