Belongs to the eukaryotic ribosomal protein eL36 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TPR_24 | PF23276 | 136 - 226 | 7.5e-08 | Fungal tetratrico peptide repeats |
| PPR_2 | PF13041 | 165 - 211 | 2.6e-06 | PPR repeat family |
| PPR_2 | PF13041 | 199 - 246 | 3.3e-11 | PPR repeat family |
| PPR_2 | PF13041 | 272 - 318 | 8.1e-07 | PPR repeat family |
| PPR_2 | PF13041 | 407 - 453 | 1.5e-07 | PPR repeat family |
| PPR_2 | PF13041 | 650 - 693 | 2.7e-06 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 297, 567, 1998 |
| AarI | CACCTGC | 1 cut(s) | 464 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1860 |
| Acc36I | ACCTGC | 2 cut(s) | 464, 833 |
| AccB1I | GGYRCC | 1 cut(s) | 2047 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 386, 1413 |
| AccI | GTMKAC | 1 cut(s) | 1864 |
| AciI | CCGC | 2 cut(s) | 282, 1484 |
| AclWI | GGATC | 2 cut(s) | 672, 1918 |
| AcsI | RAATTY | 5 cut(s) | 133, 143, 913, 1902, 1948 |
| AcuI | CTGAAG | 1 cut(s) | 329 |
| AcyI | GRCGYC | 1 cut(s) | 1746 |
| AfaI | GTAC | 4 cut(s) | 456, 1057, 1624, 1839 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 49, 205, 386, 866, 1413, 2167 |
| AflIII | ACRYGT | 1 cut(s) | 1503 |
| AgeI | ACCGGT | 1 cut(s) | 1154 |
| AhlI | ACTAGT | 1 cut(s) | 1855 |
| AjnI | CCWGG | 2 cut(s) | 379, 2160 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 302, 334, 605, 637 |
| Alw21I | GWGCWC | 2 cut(s) | 230, 523 |
| Alw26I | GTCTC | 7 cut(s) | 491, 493, 543, 599, 632, 1562, 1846 |
| AlwI | GGATC | 2 cut(s) | 672, 1918 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1606 |
| AoxI | GGCC | 3 cut(s) | 17, 1453, 1978 |
| ApeKI | GCWGC | 1 cut(s) | 1146 |
| ApoI | RAATTY | 5 cut(s) | 133, 143, 913, 1902, 1948 |
| AsiGI | ACCGGT | 1 cut(s) | 1154 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 242, 1049 |
| AspLEI | GCGC | 1 cut(s) | 89 |
| AspS9I | GGNCC | 2 cut(s) | 196, 1423 |
| AsuC2I | CCSGG | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 2 cut(s) | 98, 589 |
| AsuII | TTCGAA | 1 cut(s) | 789 |
| AvaII | GGWCC | 2 cut(s) | 196, 1423 |
| BanI | GGYRCC | 1 cut(s) | 2047 |
| BanII | GRGCYC | 1 cut(s) | 230 |
| BauI | CACGAG | 1 cut(s) | 1476 |
| BbsI | GAAGAC | 3 cut(s) | 996, 1042, 1524 |
| Bbv12I | GWGCWC | 2 cut(s) | 230, 523 |
| BbvI | GCAGC | 1 cut(s) | 1133 |
| BccI | CCATC | 3 cut(s) | 568, 1236, 1813 |
| BciT130I | CCWGG | 2 cut(s) | 381, 2162 |
| BclI | TGATCA | 1 cut(s) | 1551 |
| BcnI | CCSGG | 1 cut(s) | 200 |
| BcoDI | GTCTC | 7 cut(s) | 491, 493, 543, 599, 632, 1562, 1846 |
| BcuI | ACTAGT | 1 cut(s) | 1855 |
| BfaI | CTAG | 6 cut(s) | 986, 1208, 1428, 1509, 1697, 1856 |
| BfmI | CTRYAG | 1 cut(s) | 1598 |
| BfuAI | ACCTGC | 2 cut(s) | 464, 833 |
| BglII | AGATCT | 2 cut(s) | 1177, 1430 |
| BisI | GCNGC | 2 cut(s) | 1147, 1485 |
| BlsI | GCNGC | 2 cut(s) | 1148, 1486 |
| Bme1390I | CCNGG | 3 cut(s) | 200, 381, 2162 |
| Bme18I | GGWCC | 2 cut(s) | 196, 1423 |
| BmgT120I | GGNCC | 2 cut(s) | 196, 1423 |
| BmiI | GGNNCC | 2 cut(s) | 1425, 2049 |
| BmrFI | CCNGG | 3 cut(s) | 200, 381, 2162 |
| BmrI | ACTGGG | 2 cut(s) | 1014, 1423 |
| BmsI | GCATC | 7 cut(s) | 365, 1066, 1508, 1764, 1996, 2044, 2167 |
| BmuI | ACTGGG | 2 cut(s) | 1014, 1423 |
| BpiI | GAAGAC | 3 cut(s) | 996, 1042, 1524 |
| BpmI | CTGGAG | 1 cut(s) | 1511 |
| Bpu14I | TTCGAA | 1 cut(s) | 789 |
| BpuMI | CCSGG | 1 cut(s) | 200 |
| BsaHI | GRCGYC | 1 cut(s) | 1746 |
| BsaI | GGTCTC | 1 cut(s) | 493 |
| BsaJI | CCNNGG | 1 cut(s) | 379 |
| BsaWI | WCCGGW | 1 cut(s) | 1154 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 617, 647, 1566, 1596 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 49, 205, 386, 866, 1413, 2167 |
| Bse118I | RCCGGY | 1 cut(s) | 1154 |
| Bse1I | ACTGG | 4 cut(s) | 1009, 1418, 1528, 1611 |
| BseBI | CCWGG | 2 cut(s) | 381, 2162 |
| BseDI | CCNNGG | 1 cut(s) | 379 |
| BseGI | GGATG | 7 cut(s) | 594, 763, 1042, 1523, 1755, 1965, 2157 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 49, 205, 386, 866, 1413, 2167 |
| BseMII | CTCAG | 4 cut(s) | 428, 1347, 1431, 1904 |
| BseNI | ACTGG | 4 cut(s) | 1009, 1418, 1528, 1611 |
| BseXI | GCAGC | 1 cut(s) | 1133 |
| BseYI | CCCAGC | 1 cut(s) | 313 |
| BsgI | GTGCAG | 1 cut(s) | 1799 |
| BshFI | GGCC | 3 cut(s) | 19, 1455, 1980 |
| BshNI | GGYRCC | 1 cut(s) | 2047 |
| BshTI | ACCGGT | 1 cut(s) | 1154 |
| BsiHKAI | GWGCWC | 2 cut(s) | 230, 523 |
| BsiSI | CCGG | 3 cut(s) | 16, 199, 1155 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 49, 205, 386, 866, 1413, 2167 |
| BsmAI | GTCTC | 7 cut(s) | 491, 493, 543, 599, 632, 1562, 1846 |
| BsmI | GAATGC | 2 cut(s) | 1261, 1802 |
| BsnI | GGCC | 3 cut(s) | 19, 1455, 1980 |
| Bso31I | GGTCTC | 1 cut(s) | 493 |
| Bsp119I | TTCGAA | 1 cut(s) | 789 |
| Bsp1286I | GDGCHC | 2 cut(s) | 230, 523 |
| Bsp1407I | TGTACA | 1 cut(s) | 1055 |
| Bsp143I | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| BspACI | CCGC | 2 cut(s) | 282, 1484 |
| BspANI | GGCC | 3 cut(s) | 19, 1455, 1980 |
| BspCNI | CTCAG | 4 cut(s) | 429, 1346, 1432, 1903 |
| BspHI | TCATGA | 1 cut(s) | 2183 |
| BspLI | GGNNCC | 2 cut(s) | 1425, 2049 |
| BspMI | ACCTGC | 2 cut(s) | 464, 833 |
| BspPI | GGATC | 2 cut(s) | 672, 1918 |
| BspT104I | TTCGAA | 1 cut(s) | 789 |
| BspT107I | GGYRCC | 1 cut(s) | 2047 |
| BspTNI | GGTCTC | 1 cut(s) | 493 |
| BsrFI | RCCGGY | 1 cut(s) | 1154 |
| BsrGI | TGTACA | 1 cut(s) | 1055 |
| BsrI | ACTGG | 4 cut(s) | 1009, 1418, 1528, 1611 |
| BssAI | RCCGGY | 1 cut(s) | 1154 |
| BssECI | CCNNGG | 1 cut(s) | 379 |
| BssMI | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| BssNI | GRCGYC | 1 cut(s) | 1746 |
| BssSI | CACGAG | 1 cut(s) | 1476 |
| Bst2BI | CACGAG | 1 cut(s) | 1476 |
| Bst2UI | CCWGG | 2 cut(s) | 381, 2162 |
| Bst4CI | ACNGT | 6 cut(s) | 270, 601, 942, 1654, 1869, 2149 |
| Bst6I | CTCTTC | 1 cut(s) | 530 |
| BstACI | GRCGYC | 1 cut(s) | 1746 |
| BstAUI | TGTACA | 1 cut(s) | 1055 |
| BstBI | TTCGAA | 1 cut(s) | 789 |
| BstC8I | GCNNGC | 1 cut(s) | 2011 |
| BstDEI | CTNAG | 5 cut(s) | 437, 1333, 1440, 1890, 2173 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2165 |
| BstF5I | GGATG | 7 cut(s) | 594, 763, 1042, 1523, 1755, 1965, 2157 |
| BstHHI | GCGC | 1 cut(s) | 89 |
| BstKTI | GATC | 8 cut(s) | 646, 667, 751, 1180, 1433, 1554, 1913, 2114 |
| BstMAI | GTCTC | 7 cut(s) | 491, 493, 543, 599, 632, 1562, 1846 |
| BstMBI | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 433, 740, 1362 |
| BstNI | CCWGG | 2 cut(s) | 381, 2162 |
| BstNSI | RCATGY | 1 cut(s) | 1507 |
| BstSCI | CCNGG | 3 cut(s) | 198, 379, 2160 |
| BstSFI | CTRYAG | 1 cut(s) | 1598 |
| BstV1I | GCAGC | 1 cut(s) | 1133 |
| BstV2I | GAAGAC | 3 cut(s) | 996, 1042, 1524 |
| BstX2I | RGATCY | 2 cut(s) | 1177, 1430 |
| BstYI | RGATCY | 2 cut(s) | 1177, 1430 |
| BsuRI | GGCC | 3 cut(s) | 19, 1455, 1980 |
| BtsCI | GGATG | 7 cut(s) | 594, 763, 1042, 1523, 1755, 1965, 2157 |
| BtsI | GCAGTG | 1 cut(s) | 240 |
| BtsIMutI | CAGTG | 4 cut(s) | 213, 240, 947, 1650 |
| BveI | ACCTGC | 2 cut(s) | 464, 833 |
| Cac8I | GCNNGC | 1 cut(s) | 2011 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1606 |
| CciI | TCATGA | 1 cut(s) | 2183 |
| CfoI | GCGC | 1 cut(s) | 89 |
| Cfr10I | RCCGGY | 1 cut(s) | 1154 |
| Cfr13I | GGNCC | 2 cut(s) | 196, 1423 |
| CseI | GACGC | 1 cut(s) | 1754 |
| Csp6I | GTAC | 4 cut(s) | 455, 1056, 1623, 1838 |
| CspAI | ACCGGT | 1 cut(s) | 1154 |
| CviQI | GTAC | 4 cut(s) | 455, 1056, 1623, 1838 |
| DdeI | CTNAG | 5 cut(s) | 437, 1333, 1440, 1890, 2173 |
| DpnI | GATC | 8 cut(s) | 645, 666, 750, 1179, 1432, 1553, 1912, 2113 |
| DpnII | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1860 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1860 |
| Eam1104I | CTCTTC | 1 cut(s) | 530 |
| EarI | CTCTTC | 1 cut(s) | 530 |
| Ecl136II | GAGCTC | 1 cut(s) | 228 |
| Eco147I | AGGCCT | 1 cut(s) | 1455 |
| Eco24I | GRGCYC | 1 cut(s) | 230 |
| Eco31I | GGTCTC | 1 cut(s) | 493 |
| Eco47I | GGWCC | 2 cut(s) | 196, 1423 |
| Eco53kI | GAGCTC | 1 cut(s) | 228 |
| Eco57I | CTGAAG | 1 cut(s) | 329 |
| EcoICRI | GAGCTC | 1 cut(s) | 228 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2165 |
| EcoRI | GAATTC | 2 cut(s) | 143, 913 |
| EcoRII | CCWGG | 2 cut(s) | 379, 2160 |
| EcoT22I | ATGCAT | 2 cut(s) | 1772, 2182 |
| EcoT38I | GRGCYC | 1 cut(s) | 230 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1167, 1199, 1627, 1659 |
| FauNDI | CATATG | 1 cut(s) | 360 |
| FbaI | TGATCA | 1 cut(s) | 1551 |
| FblI | GTMKAC | 1 cut(s) | 1864 |
| Fnu4HI | GCNGC | 2 cut(s) | 1147, 1485 |
| FokI | GGATG | 7 cut(s) | 601, 770, 1049, 1530, 1742, 1952, 2144 |
| FriOI | GRGCYC | 1 cut(s) | 230 |
| Fsp4HI | GCNGC | 2 cut(s) | 1147, 1485 |
| FspBI | CTAG | 6 cut(s) | 986, 1208, 1428, 1509, 1697, 1856 |
| GlaI | GCGC | 1 cut(s) | 88 |
| GluI | GCNGC | 2 cut(s) | 1147, 1485 |
| GsaI | CCCAGC | 1 cut(s) | 317 |
| GsuI | CTGGAG | 1 cut(s) | 1511 |
| HaeIII | GGCC | 3 cut(s) | 19, 1455, 1980 |
| HapII | CCGG | 3 cut(s) | 16, 199, 1155 |
| HgaI | GACGC | 1 cut(s) | 1754 |
| HhaI | GCGC | 1 cut(s) | 89 |
| Hin1I | GRCGYC | 1 cut(s) | 1746 |
| Hin6I | GCGC | 1 cut(s) | 87 |
| HinP1I | GCGC | 1 cut(s) | 87 |
| HincII | GTYRAC | 1 cut(s) | 1011 |
| HindII | GTYRAC | 1 cut(s) | 1011 |
| HindIII | AAGCTT | 1 cut(s) | 176 |
| HinfI | GANTC | 9 cut(s) | 39, 304, 653, 870, 971, 1474, 1783, 1844, 2062 |
| HpaII | CCGG | 3 cut(s) | 16, 199, 1155 |
| HphI | GGTGA | 2 cut(s) | 98, 589 |
| Hpy166II | GTNNAC | 3 cut(s) | 1011, 1160, 1865 |
| Hpy188I | TCNGA | 7 cut(s) | 142, 309, 648, 921, 1241, 1441, 1849 |
| Hpy8I | GTNNAC | 3 cut(s) | 1011, 1160, 1865 |
| HpyAV | CCTTC | 4 cut(s) | 338, 574, 1133, 1549 |
| HpyCH4III | ACNGT | 6 cut(s) | 270, 601, 942, 1654, 1869, 2149 |
| HpyCH4IV | ACGT | 1 cut(s) | 2002 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 433, 740, 1362 |
| HpyF3I | CTNAG | 5 cut(s) | 437, 1333, 1440, 1890, 2173 |
| HpySE526I | ACGT | 1 cut(s) | 2002 |
| Hsp92I | GRCGYC | 1 cut(s) | 1746 |
| HspAI | GCGC | 1 cut(s) | 87 |
| Ksp22I | TGATCA | 1 cut(s) | 1551 |
| Kzo9I | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| LmnI | GCTCC | 1 cut(s) | 18 |
| Lsp1109I | GCAGC | 1 cut(s) | 1133 |
| LweI | GCATC | 7 cut(s) | 365, 1066, 1508, 1764, 1996, 2044, 2167 |
| MaeI | CTAG | 6 cut(s) | 986, 1208, 1428, 1509, 1697, 1856 |
| MaeII | ACGT | 1 cut(s) | 2002 |
| MaeIII | GTNAC | 1 cut(s) | 591 |
| MalI | GATC | 8 cut(s) | 645, 666, 750, 1179, 1432, 1553, 1912, 2113 |
| MboI | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| MboII | GAAGA | 7 cut(s) | 66, 547, 1001, 1042, 1106, 1299, 1524 |
| MfeI | CAATTG | 1 cut(s) | 492 |
| MflI | RGATCY | 2 cut(s) | 1177, 1430 |
| MhlI | GDGCHC | 2 cut(s) | 230, 523 |
| MlyI | GAGTC | 3 cut(s) | 662, 1468, 2056 |
| MmeI | TCCRAC | 3 cut(s) | 603, 615, 2013 |
| Mph1103I | ATGCAT | 2 cut(s) | 1772, 2182 |
| MroXI | GAANNNNTTC | 2 cut(s) | 242, 1049 |
| MseI | TTAA | 3 cut(s) | 333, 504, 776 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1775 |
| MspI | CCGG | 3 cut(s) | 16, 199, 1155 |
| MspR9I | CCNGG | 3 cut(s) | 200, 381, 2162 |
| MunI | CAATTG | 1 cut(s) | 492 |
| Mva1269I | GAATGC | 2 cut(s) | 1261, 1802 |
| MvaI | CCWGG | 2 cut(s) | 381, 2162 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 433, 740, 1362 |
| NciI | CCSGG | 1 cut(s) | 200 |
| NdeI | CATATG | 1 cut(s) | 360 |
| NdeII | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| NlaIV | GGNNCC | 2 cut(s) | 1425, 2049 |
| NmeAIII | GCCGAG | 1 cut(s) | 209 |
| NsiI | ATGCAT | 2 cut(s) | 1772, 2182 |
| NspI | RCATGY | 1 cut(s) | 1507 |
| NspV | TTCGAA | 1 cut(s) | 789 |
| PagI | TCATGA | 1 cut(s) | 2183 |
| PaqCI | CACCTGC | 1 cut(s) | 464 |
| PceI | AGGCCT | 1 cut(s) | 1455 |
| PciI | ACATGT | 1 cut(s) | 1503 |
| PctI | GAATGC | 2 cut(s) | 1261, 1802 |
| PdmI | GAANNNNTTC | 2 cut(s) | 242, 1049 |
| PfeI | GAWTC | 6 cut(s) | 39, 304, 870, 971, 1783, 1844 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 386, 1413 |
| PinAI | ACCGGT | 1 cut(s) | 1154 |
| PkrI | GCNGC | 2 cut(s) | 1148, 1486 |
| PleI | GAGTC | 3 cut(s) | 661, 1468, 2056 |
| PpsI | GAGTC | 3 cut(s) | 661, 1468, 2056 |
| PscI | ACATGT | 1 cut(s) | 1503 |
| PsiI | TTATAA | 3 cut(s) | 297, 567, 1998 |
| Psp124BI | GAGCTC | 1 cut(s) | 230 |
| Psp6I | CCWGG | 2 cut(s) | 379, 2160 |
| PspFI | CCCAGC | 1 cut(s) | 313 |
| PspGI | CCWGG | 2 cut(s) | 379, 2160 |
| PspN4I | GGNNCC | 2 cut(s) | 1425, 2049 |
| PspPI | GGNCC | 2 cut(s) | 196, 1423 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1606 |
| PsuI | RGATCY | 2 cut(s) | 1177, 1430 |
| RsaI | GTAC | 4 cut(s) | 456, 1057, 1624, 1839 |
| RsaNI | GTAC | 4 cut(s) | 455, 1056, 1623, 1838 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1775 |
| SacI | GAGCTC | 1 cut(s) | 230 |
| SaqAI | TTAA | 3 cut(s) | 333, 504, 776 |
| SatI | GCNGC | 2 cut(s) | 1147, 1485 |
| Sau3AI | GATC | 8 cut(s) | 643, 664, 748, 1177, 1430, 1551, 1910, 2111 |
| Sau96I | GGNCC | 2 cut(s) | 196, 1423 |
| SchI | GAGTC | 3 cut(s) | 662, 1468, 2056 |
| ScrFI | CCNGG | 3 cut(s) | 200, 381, 2162 |
| SduI | GDGCHC | 2 cut(s) | 230, 523 |
| SfaNI | GCATC | 7 cut(s) | 365, 1066, 1508, 1764, 1996, 2044, 2167 |
| SfcI | CTRYAG | 1 cut(s) | 1598 |
| SfuI | TTCGAA | 1 cut(s) | 789 |
| SinI | GGWCC | 2 cut(s) | 196, 1423 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1775 |
| SpeI | ACTAGT | 1 cut(s) | 1855 |
| SseBI | AGGCCT | 1 cut(s) | 1455 |
| SsiI | CCGC | 2 cut(s) | 282, 1484 |
| SspI | AATATT | 2 cut(s) | 157, 1231 |
| SspMI | CTAG | 6 cut(s) | 986, 1208, 1428, 1509, 1697, 1856 |
| SstI | GAGCTC | 1 cut(s) | 230 |
| StuI | AGGCCT | 1 cut(s) | 1455 |
| StyD4I | CCNGG | 3 cut(s) | 198, 379, 2160 |
| TaaI | ACNGT | 6 cut(s) | 270, 601, 942, 1654, 1869, 2149 |
| TaiI | ACGT | 1 cut(s) | 2005 |
| TaqI | TCGA | 6 cut(s) | 147, 547, 751, 789, 974, 1786 |
| TatI | WGTACW | 1 cut(s) | 1055 |
| TauI | GCSGC | 1 cut(s) | 1487 |
| TfiI | GAWTC | 6 cut(s) | 39, 304, 870, 971, 1783, 1844 |
| Tru1I | TTAA | 3 cut(s) | 333, 504, 776 |
| Tru9I | TTAA | 3 cut(s) | 333, 504, 776 |
| TscAI | CASTG | 4 cut(s) | 220, 240, 947, 1657 |
| TseI | GCWGC | 1 cut(s) | 1146 |
| TspDTI | ATGAA | 8 cut(s) | 72, 482, 695, 774, 1058, 1382, 1964, 2112 |
| TspRI | CASTG | 4 cut(s) | 220, 240, 947, 1657 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 386, 1413 |
| VpaK11BI | GGWCC | 2 cut(s) | 196, 1423 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2165 |
| XapI | RAATTY | 5 cut(s) | 133, 143, 913, 1902, 1948 |
| XbaI | TCTAGA | 1 cut(s) | 985 |
| XceI | RCATGY | 1 cut(s) | 1507 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2017 |
| XmiI | GTMKAC | 1 cut(s) | 1864 |
| XmnI | GAANNNNTTC | 2 cut(s) | 242, 1049 |
| XspI | CTAG | 6 cut(s) | 986, 1208, 1428, 1509, 1697, 1856 |
| Zsp2I | ATGCAT | 2 cut(s) | 1772, 2182 |