ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 284 |
| AcsI | RAATTY | 3 cut(s) | 74, 309, 328 |
| AcuI | CTGAAG | 1 cut(s) | 251 |
| AgsI | TTSAA | 1 cut(s) | 298 |
| AluBI | AGCT | 5 cut(s) | 18, 60, 128, 213, 234 |
| AluI | AGCT | 5 cut(s) | 18, 60, 128, 213, 234 |
| Alw26I | GTCTC | 2 cut(s) | 170, 221 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 131, 274 |
| ApeKI | GCWGC | 3 cut(s) | 128, 131, 144 |
| ApoI | RAATTY | 3 cut(s) | 74, 309, 328 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 98, 130 |
| AsuII | TTCGAA | 1 cut(s) | 41 |
| BbvI | GCAGC | 3 cut(s) | 115, 118, 131 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 59, 93 |
| BcoDI | GTCTC | 2 cut(s) | 170, 221 |
| BisI | GCNGC | 3 cut(s) | 129, 132, 145 |
| BlsI | GCNGC | 3 cut(s) | 130, 133, 146 |
| BmsI | GCATC | 1 cut(s) | 131 |
| Bpu14I | TTCGAA | 1 cut(s) | 41 |
| BseGI | GGATG | 1 cut(s) | 146 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BseXI | GCAGC | 3 cut(s) | 115, 118, 131 |
| BsiSI | CCGG | 1 cut(s) | 222 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BsmAI | GTCTC | 2 cut(s) | 170, 221 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| Bsp119I | TTCGAA | 1 cut(s) | 41 |
| Bsp143I | GATC | 1 cut(s) | 199 |
| BspACI | CCGC | 1 cut(s) | 284 |
| BspT104I | TTCGAA | 1 cut(s) | 41 |
| BssMI | GATC | 1 cut(s) | 199 |
| Bst6I | CTCTTC | 1 cut(s) | 254 |
| BstBI | TTCGAA | 1 cut(s) | 41 |
| BstC8I | GCNNGC | 1 cut(s) | 35 |
| BstDEI | CTNAG | 1 cut(s) | 203 |
| BstF5I | GGATG | 1 cut(s) | 146 |
| BstKTI | GATC | 1 cut(s) | 202 |
| BstMAI | GTCTC | 2 cut(s) | 170, 221 |
| BstMBI | GATC | 1 cut(s) | 199 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 231 |
| BstNSI | RCATGY | 1 cut(s) | 37 |
| BstV1I | GCAGC | 3 cut(s) | 115, 118, 131 |
| BtsCI | GGATG | 1 cut(s) | 146 |
| Cac8I | GCNNGC | 1 cut(s) | 35 |
| CaiI | CAGNNNCTG | 2 cut(s) | 131, 274 |
| CviAII | CATG | 5 cut(s) | 34, 117, 150, 185, 322 |
| CviJI | RGCY | 8 cut(s) | 7, 18, 60, 128, 213, 225, 234, 274 |
| CviKI_1 | RGCY | 8 cut(s) | 7, 18, 60, 128, 213, 225, 234, 274 |
| DdeI | CTNAG | 1 cut(s) | 203 |
| DpnI | GATC | 1 cut(s) | 201 |
| DpnII | GATC | 1 cut(s) | 199 |
| Eam1104I | CTCTTC | 1 cut(s) | 254 |
| EarI | CTCTTC | 1 cut(s) | 254 |
| Eco57I | CTGAAG | 1 cut(s) | 251 |
| FaeI | CATG | 5 cut(s) | 37, 120, 153, 188, 325 |
| FaiI | YATR | 5 cut(s) | 35, 118, 151, 186, 323 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 44, 76 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FatI | CATG | 5 cut(s) | 33, 116, 149, 184, 321 |
| Fnu4HI | GCNGC | 3 cut(s) | 129, 132, 145 |
| FokI | GGATG | 1 cut(s) | 153 |
| Fsp4HI | GCNGC | 3 cut(s) | 129, 132, 145 |
| GluI | GCNGC | 3 cut(s) | 129, 132, 145 |
| HapII | CCGG | 1 cut(s) | 222 |
| Hin1II | CATG | 5 cut(s) | 37, 120, 153, 188, 325 |
| HindIII | AAGCTT | 1 cut(s) | 58 |
| HpaII | CCGG | 1 cut(s) | 222 |
| Hpy166II | GTNNAC | 1 cut(s) | 194 |
| Hpy188I | TCNGA | 1 cut(s) | 270 |
| Hpy8I | GTNNAC | 1 cut(s) | 194 |
| HpyAV | CCTTC | 1 cut(s) | 48 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 231 |
| HpyF3I | CTNAG | 1 cut(s) | 203 |
| Hsp92II | CATG | 5 cut(s) | 37, 120, 153, 188, 325 |
| Kzo9I | GATC | 1 cut(s) | 199 |
| LmnI | GCTCC | 1 cut(s) | 239 |
| LpnPI | CCDG | 2 cut(s) | 165, 235 |
| Lsp1109I | GCAGC | 3 cut(s) | 115, 118, 131 |
| LweI | GCATC | 1 cut(s) | 131 |
| MalI | GATC | 1 cut(s) | 201 |
| MboI | GATC | 1 cut(s) | 199 |
| MboII | GAAGA | 2 cut(s) | 241, 257 |
| MluCI | AATT | 4 cut(s) | 47, 74, 309, 328 |
| MmeI | TCCRAC | 1 cut(s) | 261 |
| MnlI | CCTC | 5 cut(s) | 85, 166, 257, 264, 318 |
| MseI | TTAA | 1 cut(s) | 51 |
| MslI | CAYNNNNRTG | 1 cut(s) | 189 |
| MspA1I | CMGCKG | 1 cut(s) | 128 |
| MspI | CCGG | 1 cut(s) | 222 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 231 |
| NdeII | GATC | 1 cut(s) | 199 |
| NlaIII | CATG | 5 cut(s) | 37, 120, 153, 188, 325 |
| NspI | RCATGY | 1 cut(s) | 37 |
| NspV | TTCGAA | 1 cut(s) | 41 |
| PaeI | GCATGC | 1 cut(s) | 37 |
| PflFI | GACNNNGTC | 1 cut(s) | 158 |
| PkrI | GCNGC | 3 cut(s) | 130, 133, 146 |
| PstNI | CAGNNNCTG | 2 cut(s) | 131, 274 |
| PsyI | GACNNNGTC | 1 cut(s) | 158 |
| PvuII | CAGCTG | 1 cut(s) | 128 |
| RseI | CAYNNNNRTG | 1 cut(s) | 189 |
| SaqAI | TTAA | 1 cut(s) | 51 |
| SatI | GCNGC | 3 cut(s) | 129, 132, 145 |
| Sau3AI | GATC | 1 cut(s) | 199 |
| SetI | ASST | 8 cut(s) | 20, 62, 111, 130, 184, 215, 236, 282 |
| SfaNI | GCATC | 1 cut(s) | 131 |
| SfuI | TTCGAA | 1 cut(s) | 41 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 189 |
| SphI | GCATGC | 1 cut(s) | 37 |
| Sse9I | AATT | 4 cut(s) | 47, 74, 309, 328 |
| SsiI | CCGC | 1 cut(s) | 284 |
| TaqI | TCGA | 3 cut(s) | 41, 69, 162 |
| TasI | AATT | 4 cut(s) | 47, 74, 309, 328 |
| Tru1I | TTAA | 1 cut(s) | 51 |
| Tru9I | TTAA | 1 cut(s) | 51 |
| TseI | GCWGC | 3 cut(s) | 128, 131, 144 |
| TspDTI | ATGAA | 1 cut(s) | 251 |
| TspGWI | ACGGA | 1 cut(s) | 242 |
| Tth111I | GACNNNGTC | 1 cut(s) | 158 |
| XapI | RAATTY | 3 cut(s) | 74, 309, 328 |
| XceI | RCATGY | 1 cut(s) | 37 |