Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 23 |
| Acc65I | GGTACC | 1 cut(s) | 527 |
| AccB1I | GGYRCC | 1 cut(s) | 527 |
| AccI | GTMKAC | 1 cut(s) | 608 |
| AciI | CCGC | 1 cut(s) | 151 |
| AclI | AACGTT | 1 cut(s) | 129 |
| AfaI | GTAC | 2 cut(s) | 278, 529 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 76, 653, 698 |
| AgsI | TTSAA | 4 cut(s) | 337, 388, 547, 568 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 665 |
| AjnI | CCWGG | 1 cut(s) | 598 |
| AluBI | AGCT | 1 cut(s) | 684 |
| AluI | AGCT | 1 cut(s) | 684 |
| Ama87I | CYCGRG | 1 cut(s) | 692 |
| AoxI | GGCC | 2 cut(s) | 254, 489 |
| ApaI | GGGCCC | 1 cut(s) | 493 |
| ApeKI | GCWGC | 1 cut(s) | 296 |
| Asp718I | GGTACC | 1 cut(s) | 527 |
| AspS9I | GGNCC | 5 cut(s) | 254, 489, 490, 592, 624 |
| AsuHPI | GGTGA | 2 cut(s) | 81, 112 |
| AvaI | CYCGRG | 1 cut(s) | 692 |
| AvaII | GGWCC | 2 cut(s) | 592, 624 |
| BaeGI | GKGCMC | 1 cut(s) | 493 |
| BanI | GGYRCC | 1 cut(s) | 527 |
| BanII | GRGCYC | 1 cut(s) | 493 |
| BbsI | GAAGAC | 1 cut(s) | 21 |
| BbvI | GCAGC | 1 cut(s) | 283 |
| BccI | CCATC | 3 cut(s) | 433, 603, 671 |
| BciT130I | CCWGG | 1 cut(s) | 600 |
| BfaI | CTAG | 3 cut(s) | 210, 243, 416 |
| BfmI | CTRYAG | 1 cut(s) | 575 |
| BisI | GCNGC | 1 cut(s) | 297 |
| BlsI | GCNGC | 1 cut(s) | 298 |
| Bme1390I | CCNGG | 1 cut(s) | 600 |
| Bme18I | GGWCC | 2 cut(s) | 592, 624 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 665 |
| BmeT110I | CYCGRG | 1 cut(s) | 692 |
| BmgT120I | GGNCC | 5 cut(s) | 254, 489, 490, 592, 624 |
| BmiI | GGNNCC | 4 cut(s) | 255, 491, 529, 626 |
| BmrFI | CCNGG | 1 cut(s) | 600 |
| BmrI | ACTGGG | 1 cut(s) | 526 |
| BmsI | GCATC | 3 cut(s) | 248, 310, 529 |
| BmuI | ACTGGG | 1 cut(s) | 526 |
| BpiI | GAAGAC | 1 cut(s) | 21 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 76, 653, 698 |
| Bse118I | RCCGGY | 1 cut(s) | 256 |
| Bse1I | ACTGG | 2 cut(s) | 284, 532 |
| Bse3DI | GCAATG | 1 cut(s) | 323 |
| BseBI | CCWGG | 1 cut(s) | 600 |
| BseGI | GGATG | 3 cut(s) | 448, 595, 682 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 76, 653, 698 |
| BseMI | GCAATG | 1 cut(s) | 323 |
| BseNI | ACTGG | 2 cut(s) | 284, 532 |
| BseSI | GKGCMC | 1 cut(s) | 493 |
| BseXI | GCAGC | 1 cut(s) | 283 |
| BsgI | GTGCAG | 1 cut(s) | 422 |
| BshFI | GGCC | 2 cut(s) | 256, 491 |
| BshNI | GGYRCC | 1 cut(s) | 527 |
| BsiHKCI | CYCGRG | 1 cut(s) | 692 |
| BsiSI | CCGG | 1 cut(s) | 257 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 76, 653, 698 |
| BsmI | GAATGC | 1 cut(s) | 565 |
| BsnI | GGCC | 2 cut(s) | 256, 491 |
| BsoBI | CYCGRG | 1 cut(s) | 692 |
| Bsp120I | GGGCCC | 1 cut(s) | 489 |
| Bsp1286I | GDGCHC | 1 cut(s) | 493 |
| BspACI | CCGC | 1 cut(s) | 151 |
| BspANI | GGCC | 2 cut(s) | 256, 491 |
| BspLI | GGNNCC | 4 cut(s) | 255, 491, 529, 626 |
| BspT107I | GGYRCC | 1 cut(s) | 527 |
| BsrDI | GCAATG | 1 cut(s) | 323 |
| BsrFI | RCCGGY | 1 cut(s) | 256 |
| BsrI | ACTGG | 2 cut(s) | 284, 532 |
| BssAI | RCCGGY | 1 cut(s) | 256 |
| Bst2UI | CCWGG | 1 cut(s) | 600 |
| Bst4CI | ACNGT | 1 cut(s) | 556 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 74 |
| BstF5I | GGATG | 3 cut(s) | 448, 595, 682 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 157, 215 |
| BstNI | CCWGG | 1 cut(s) | 600 |
| BstNSI | RCATGY | 1 cut(s) | 332 |
| BstSCI | CCNGG | 1 cut(s) | 598 |
| BstSFI | CTRYAG | 1 cut(s) | 575 |
| BstSLI | GKGCMC | 1 cut(s) | 493 |
| BstV1I | GCAGC | 1 cut(s) | 283 |
| BstV2I | GAAGAC | 1 cut(s) | 21 |
| BsuRI | GGCC | 2 cut(s) | 256, 491 |
| BtsCI | GGATG | 3 cut(s) | 448, 595, 682 |
| BtsI | GCAGTG | 1 cut(s) | 225 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| Cfr10I | RCCGGY | 1 cut(s) | 256 |
| Cfr13I | GGNCC | 5 cut(s) | 254, 489, 490, 592, 624 |
| Csp6I | GTAC | 2 cut(s) | 277, 528 |
| CviAII | CATG | 4 cut(s) | 203, 329, 342, 458 |
| CviJI | RGCY | 4 cut(s) | 256, 296, 491, 684 |
| CviKI_1 | RGCY | 4 cut(s) | 256, 296, 491, 684 |
| CviQI | GTAC | 2 cut(s) | 277, 528 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 23 |
| DriI | GACNNNNNGTC | 1 cut(s) | 665 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 23 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 665 |
| Eco24I | GRGCYC | 1 cut(s) | 493 |
| Eco47I | GGWCC | 2 cut(s) | 592, 624 |
| Eco88I | CYCGRG | 1 cut(s) | 692 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 74 |
| EcoO109I | RGGNCCY | 2 cut(s) | 490, 624 |
| EcoRII | CCWGG | 1 cut(s) | 598 |
| EcoT22I | ATGCAT | 1 cut(s) | 325 |
| EcoT38I | GRGCYC | 1 cut(s) | 493 |
| FaeI | CATG | 4 cut(s) | 206, 332, 345, 461 |
| FaiI | YATR | 7 cut(s) | 95, 204, 330, 343, 459, 479, 515 |
| FatI | CATG | 4 cut(s) | 202, 328, 341, 457 |
| FauI | CCCGC | 1 cut(s) | 144 |
| FblI | GTMKAC | 1 cut(s) | 608 |
| Fnu4HI | GCNGC | 1 cut(s) | 297 |
| FokI | GGATG | 3 cut(s) | 455, 582, 689 |
| FriOI | GRGCYC | 1 cut(s) | 493 |
| Fsp4HI | GCNGC | 1 cut(s) | 297 |
| FspBI | CTAG | 3 cut(s) | 210, 243, 416 |
| GluI | GCNGC | 1 cut(s) | 297 |
| HaeIII | GGCC | 2 cut(s) | 256, 491 |
| HapII | CCGG | 1 cut(s) | 257 |
| Hin1II | CATG | 4 cut(s) | 206, 332, 345, 461 |
| HinfI | GANTC | 1 cut(s) | 24 |
| HpaII | CCGG | 1 cut(s) | 257 |
| HphI | GGTGA | 2 cut(s) | 81, 112 |
| Hpy166II | GTNNAC | 2 cut(s) | 503, 609 |
| Hpy188I | TCNGA | 2 cut(s) | 312, 651 |
| Hpy188III | TCNNGA | 1 cut(s) | 416 |
| Hpy8I | GTNNAC | 2 cut(s) | 503, 609 |
| HpyAV | CCTTC | 4 cut(s) | 44, 208, 307, 562 |
| HpyCH4III | ACNGT | 1 cut(s) | 556 |
| HpyCH4IV | ACGT | 2 cut(s) | 129, 348 |
| HpyCH4V | TGCA | 6 cut(s) | 239, 323, 328, 345, 403, 457 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 157, 215 |
| HpySE526I | ACGT | 2 cut(s) | 129, 348 |
| Hsp92II | CATG | 4 cut(s) | 206, 332, 345, 461 |
| KpnI | GGTACC | 1 cut(s) | 531 |
| Lsp1109I | GCAGC | 1 cut(s) | 283 |
| LweI | GCATC | 3 cut(s) | 248, 310, 529 |
| MaeI | CTAG | 3 cut(s) | 210, 243, 416 |
| MaeII | ACGT | 2 cut(s) | 129, 348 |
| MaeIII | GTNAC | 1 cut(s) | 349 |
| MboII | GAAGA | 5 cut(s) | 26, 59, 115, 329, 431 |
| MfeI | CAATTG | 1 cut(s) | 587 |
| MhlI | GDGCHC | 1 cut(s) | 493 |
| MluCI | AATT | 3 cut(s) | 72, 393, 587 |
| MlyI | GAGTC | 1 cut(s) | 33 |
| MnlI | CCTC | 5 cut(s) | 22, 70, 91, 318, 657 |
| Mph1103I | ATGCAT | 1 cut(s) | 325 |
| MseI | TTAA | 1 cut(s) | 396 |
| MslI | CAYNNNNRTG | 1 cut(s) | 462 |
| MspI | CCGG | 1 cut(s) | 257 |
| MspR9I | CCNGG | 1 cut(s) | 600 |
| MunI | CAATTG | 1 cut(s) | 587 |
| Mva1269I | GAATGC | 1 cut(s) | 565 |
| MvaI | CCWGG | 1 cut(s) | 600 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 157, 215 |
| NlaIII | CATG | 4 cut(s) | 206, 332, 345, 461 |
| NlaIV | GGNNCC | 4 cut(s) | 255, 491, 529, 626 |
| NsiI | ATGCAT | 1 cut(s) | 325 |
| NspI | RCATGY | 1 cut(s) | 332 |
| PctI | GAATGC | 1 cut(s) | 565 |
| PkrI | GCNGC | 1 cut(s) | 298 |
| PleI | GAGTC | 1 cut(s) | 32 |
| PpsI | GAGTC | 1 cut(s) | 32 |
| PpuMI | RGGWCCY | 1 cut(s) | 624 |
| Psp1406I | AACGTT | 1 cut(s) | 129 |
| Psp5II | RGGWCCY | 1 cut(s) | 624 |
| Psp6I | CCWGG | 1 cut(s) | 598 |
| PspGI | CCWGG | 1 cut(s) | 598 |
| PspN4I | GGNNCC | 4 cut(s) | 255, 491, 529, 626 |
| PspOMI | GGGCCC | 1 cut(s) | 489 |
| PspPI | GGNCC | 5 cut(s) | 254, 489, 490, 592, 624 |
| PspPPI | RGGWCCY | 1 cut(s) | 624 |
| RsaI | GTAC | 2 cut(s) | 278, 529 |
| RsaNI | GTAC | 2 cut(s) | 277, 528 |
| RseI | CAYNNNNRTG | 1 cut(s) | 462 |
| SaqAI | TTAA | 1 cut(s) | 396 |
| SatI | GCNGC | 1 cut(s) | 297 |
| Sau96I | GGNCC | 5 cut(s) | 254, 489, 490, 592, 624 |
| SchI | GAGTC | 1 cut(s) | 33 |
| ScrFI | CCNGG | 1 cut(s) | 600 |
| SduI | GDGCHC | 1 cut(s) | 493 |
| SfaNI | GCATC | 3 cut(s) | 248, 310, 529 |
| SfcI | CTRYAG | 1 cut(s) | 575 |
| SinI | GGWCC | 2 cut(s) | 592, 624 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 462 |
| Sse9I | AATT | 3 cut(s) | 72, 393, 587 |
| SsiI | CCGC | 1 cut(s) | 151 |
| SspI | AATATT | 1 cut(s) | 304 |
| SspMI | CTAG | 3 cut(s) | 210, 243, 416 |
| StyD4I | CCNGG | 1 cut(s) | 598 |
| TaaI | ACNGT | 1 cut(s) | 556 |
| TaiI | ACGT | 2 cut(s) | 132, 351 |
| TaqI | TCGA | 2 cut(s) | 27, 688 |
| TasI | AATT | 3 cut(s) | 72, 393, 587 |
| Tru1I | TTAA | 1 cut(s) | 396 |
| Tru9I | TTAA | 1 cut(s) | 396 |
| TscAI | CASTG | 1 cut(s) | 225 |
| TseI | GCWGC | 1 cut(s) | 296 |
| TspGWI | ACGGA | 1 cut(s) | 245 |
| TspRI | CASTG | 1 cut(s) | 225 |
| VpaK11BI | GGWCC | 2 cut(s) | 592, 624 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 74 |
| XbaI | TCTAGA | 1 cut(s) | 415 |
| XceI | RCATGY | 1 cut(s) | 332 |
| XmiI | GTMKAC | 1 cut(s) | 608 |
| XspI | CTAG | 3 cut(s) | 210, 243, 416 |
| Zsp2I | ATGCAT | 1 cut(s) | 325 |