Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 289 |
| AciI | CCGC | 2 cut(s) | 638, 670 |
| AclWI | GGATC | 1 cut(s) | 270 |
| AcsI | RAATTY | 2 cut(s) | 88, 450 |
| AfaI | GTAC | 3 cut(s) | 62, 599, 611 |
| AgsI | TTSAA | 6 cut(s) | 55, 242, 275, 371, 401, 569 |
| AjnI | CCWGG | 1 cut(s) | 464 |
| AluBI | AGCT | 2 cut(s) | 152, 545 |
| AluI | AGCT | 2 cut(s) | 152, 545 |
| Alw26I | GTCTC | 1 cut(s) | 186 |
| AlwI | GGATC | 1 cut(s) | 270 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 259 |
| AoxI | GGCC | 2 cut(s) | 482, 603 |
| ApeKI | GCWGC | 2 cut(s) | 79, 253 |
| ApoI | RAATTY | 2 cut(s) | 88, 450 |
| AspS9I | GGNCC | 1 cut(s) | 127 |
| AvaII | GGWCC | 1 cut(s) | 127 |
| BaeGI | GKGCMC | 1 cut(s) | 712 |
| BbvI | GCAGC | 2 cut(s) | 91, 265 |
| BciT130I | CCWGG | 1 cut(s) | 466 |
| BcoDI | GTCTC | 1 cut(s) | 186 |
| BfaI | CTAG | 3 cut(s) | 231, 687, 698 |
| BglII | AGATCT | 1 cut(s) | 514 |
| BisI | GCNGC | 2 cut(s) | 80, 254 |
| BlsI | GCNGC | 2 cut(s) | 81, 255 |
| BmcAI | AGTACT | 1 cut(s) | 611 |
| Bme1390I | CCNGG | 1 cut(s) | 466 |
| Bme18I | GGWCC | 1 cut(s) | 127 |
| BmgT120I | GGNCC | 1 cut(s) | 127 |
| BmrFI | CCNGG | 1 cut(s) | 466 |
| BmsI | GCATC | 2 cut(s) | 80, 625 |
| BpmI | CTGGAG | 1 cut(s) | 577 |
| BsaJI | CCNNGG | 1 cut(s) | 485 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 156, 186 |
| Bse3DI | GCAATG | 1 cut(s) | 454 |
| BseBI | CCWGG | 1 cut(s) | 466 |
| BseDI | CCNNGG | 1 cut(s) | 485 |
| BseGI | GGATG | 2 cut(s) | 640, 646 |
| BseMI | GCAATG | 1 cut(s) | 454 |
| BseMII | CTCAG | 1 cut(s) | 672 |
| BseSI | GKGCMC | 1 cut(s) | 712 |
| BseXI | GCAGC | 2 cut(s) | 91, 265 |
| BshFI | GGCC | 2 cut(s) | 484, 605 |
| BsmAI | GTCTC | 1 cut(s) | 186 |
| BsmI | GAATGC | 1 cut(s) | 19 |
| BsnI | GGCC | 2 cut(s) | 484, 605 |
| Bsp1286I | GDGCHC | 1 cut(s) | 712 |
| Bsp1407I | TGTACA | 1 cut(s) | 597 |
| Bsp143I | GATC | 3 cut(s) | 262, 394, 514 |
| BspACI | CCGC | 2 cut(s) | 638, 670 |
| BspANI | GGCC | 2 cut(s) | 484, 605 |
| BspCNI | CTCAG | 1 cut(s) | 673 |
| BspHI | TCATGA | 1 cut(s) | 184 |
| BspPI | GGATC | 1 cut(s) | 270 |
| BsrDI | GCAATG | 1 cut(s) | 454 |
| BsrGI | TGTACA | 1 cut(s) | 597 |
| BssECI | CCNNGG | 1 cut(s) | 485 |
| BssMI | GATC | 3 cut(s) | 262, 394, 514 |
| BssT1I | CCWWGG | 1 cut(s) | 485 |
| Bst2UI | CCWGG | 1 cut(s) | 466 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 172 |
| BstAUI | TGTACA | 1 cut(s) | 597 |
| BstC8I | GCNNGC | 2 cut(s) | 203, 482 |
| BstDEI | CTNAG | 2 cut(s) | 296, 681 |
| BstF5I | GGATG | 2 cut(s) | 640, 646 |
| BstKTI | GATC | 3 cut(s) | 265, 397, 517 |
| BstMAI | GTCTC | 1 cut(s) | 186 |
| BstMBI | GATC | 3 cut(s) | 262, 394, 514 |
| BstNI | CCWGG | 1 cut(s) | 466 |
| BstNSI | RCATGY | 1 cut(s) | 524 |
| BstSCI | CCNGG | 1 cut(s) | 464 |
| BstSLI | GKGCMC | 1 cut(s) | 712 |
| BstV1I | GCAGC | 2 cut(s) | 91, 265 |
| BstX2I | RGATCY | 1 cut(s) | 514 |
| BstYI | RGATCY | 1 cut(s) | 514 |
| BsuRI | GGCC | 2 cut(s) | 484, 605 |
| BtsCI | GGATG | 2 cut(s) | 640, 646 |
| Cac8I | GCNNGC | 2 cut(s) | 203, 482 |
| CaiI | CAGNNNCTG | 1 cut(s) | 259 |
| CciI | TCATGA | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 1 cut(s) | 127 |
| CseI | GACGC | 1 cut(s) | 245 |
| Csp6I | GTAC | 3 cut(s) | 61, 598, 610 |
| CviAII | CATG | 2 cut(s) | 185, 521 |
| CviJI | RGCY | 9 cut(s) | 29, 152, 201, 335, 484, 545, 555, 605, 686 |
| CviKI_1 | RGCY | 9 cut(s) | 29, 152, 201, 335, 484, 545, 555, 605, 686 |
| CviQI | GTAC | 3 cut(s) | 61, 598, 610 |
| DdeI | CTNAG | 2 cut(s) | 296, 681 |
| DpnI | GATC | 3 cut(s) | 264, 396, 516 |
| DpnII | GATC | 3 cut(s) | 262, 394, 514 |
| EciI | GGCGGA | 1 cut(s) | 685 |
| Eco130I | CCWWGG | 1 cut(s) | 485 |
| Eco47I | GGWCC | 1 cut(s) | 127 |
| EcoRII | CCWGG | 1 cut(s) | 464 |
| EcoT14I | CCWWGG | 1 cut(s) | 485 |
| ErhI | CCWWGG | 1 cut(s) | 485 |
| FaeI | CATG | 2 cut(s) | 188, 524 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 276, 308 |
| FatI | CATG | 2 cut(s) | 184, 520 |
| FauNDI | CATATG | 1 cut(s) | 352 |
| FblI | GTMKAC | 1 cut(s) | 289 |
| Fnu4HI | GCNGC | 2 cut(s) | 80, 254 |
| FokI | GGATG | 2 cut(s) | 633, 647 |
| Fsp4HI | GCNGC | 2 cut(s) | 80, 254 |
| FspBI | CTAG | 3 cut(s) | 231, 687, 698 |
| GluI | GCNGC | 2 cut(s) | 80, 254 |
| GsuI | CTGGAG | 1 cut(s) | 577 |
| HaeIII | GGCC | 2 cut(s) | 484, 605 |
| HgaI | GACGC | 1 cut(s) | 245 |
| Hin1II | CATG | 2 cut(s) | 188, 524 |
| HincII | GTYRAC | 1 cut(s) | 290 |
| HindII | GTYRAC | 1 cut(s) | 290 |
| HinfI | GANTC | 5 cut(s) | 179, 507, 586, 620, 641 |
| Hpy166II | GTNNAC | 3 cut(s) | 61, 127, 290 |
| Hpy188I | TCNGA | 3 cut(s) | 267, 512, 682 |
| Hpy188III | TCNNGA | 4 cut(s) | 35, 185, 260, 617 |
| Hpy8I | GTNNAC | 3 cut(s) | 61, 127, 290 |
| HpyAV | CCTTC | 4 cut(s) | 49, 213, 488, 666 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 172 |
| HpyCH4IV | ACGT | 2 cut(s) | 110, 712 |
| HpyCH4V | TGCA | 3 cut(s) | 413, 459, 480 |
| HpyF3I | CTNAG | 2 cut(s) | 296, 681 |
| HpySE526I | ACGT | 2 cut(s) | 110, 712 |
| Hsp92II | CATG | 2 cut(s) | 188, 524 |
| Kzo9I | GATC | 3 cut(s) | 262, 394, 514 |
| Lsp1109I | GCAGC | 2 cut(s) | 91, 265 |
| LweI | GCATC | 2 cut(s) | 80, 625 |
| MaeI | CTAG | 3 cut(s) | 231, 687, 698 |
| MaeII | ACGT | 2 cut(s) | 110, 712 |
| MaeIII | GTNAC | 2 cut(s) | 106, 166 |
| MalI | GATC | 3 cut(s) | 264, 396, 516 |
| MboI | GATC | 3 cut(s) | 262, 394, 514 |
| MboII | GAAGA | 2 cut(s) | 389, 615 |
| MflI | RGATCY | 1 cut(s) | 514 |
| MhlI | GDGCHC | 1 cut(s) | 712 |
| MluCI | AATT | 7 cut(s) | 19, 39, 88, 371, 450, 561, 569 |
| MlyI | GAGTC | 1 cut(s) | 188 |
| MmeI | TCCRAC | 2 cut(s) | 196, 674 |
| MnlI | CCTC | 2 cut(s) | 491, 676 |
| MseI | TTAA | 3 cut(s) | 86, 374, 528 |
| MspR9I | CCNGG | 1 cut(s) | 466 |
| Mva1269I | GAATGC | 1 cut(s) | 19 |
| MvaI | CCWGG | 1 cut(s) | 466 |
| NdeI | CATATG | 1 cut(s) | 352 |
| NdeII | GATC | 3 cut(s) | 262, 394, 514 |
| NlaIII | CATG | 2 cut(s) | 188, 524 |
| NspI | RCATGY | 1 cut(s) | 524 |
| PagI | TCATGA | 1 cut(s) | 184 |
| PctI | GAATGC | 1 cut(s) | 19 |
| PfeI | GAWTC | 4 cut(s) | 507, 586, 620, 641 |
| PkrI | GCNGC | 2 cut(s) | 81, 255 |
| PleI | GAGTC | 1 cut(s) | 187 |
| PpsI | GAGTC | 1 cut(s) | 187 |
| Psp6I | CCWGG | 1 cut(s) | 464 |
| PspGI | CCWGG | 1 cut(s) | 464 |
| PspPI | GGNCC | 1 cut(s) | 127 |
| PstNI | CAGNNNCTG | 1 cut(s) | 259 |
| PsuI | RGATCY | 1 cut(s) | 514 |
| RsaI | GTAC | 3 cut(s) | 62, 599, 611 |
| RsaNI | GTAC | 3 cut(s) | 61, 598, 610 |
| SalI | GTCGAC | 1 cut(s) | 288 |
| SaqAI | TTAA | 3 cut(s) | 86, 374, 528 |
| SatI | GCNGC | 2 cut(s) | 80, 254 |
| Sau3AI | GATC | 3 cut(s) | 262, 394, 514 |
| Sau96I | GGNCC | 1 cut(s) | 127 |
| ScaI | AGTACT | 1 cut(s) | 611 |
| SchI | GAGTC | 1 cut(s) | 188 |
| ScrFI | CCNGG | 1 cut(s) | 466 |
| SduI | GDGCHC | 1 cut(s) | 712 |
| SfaNI | GCATC | 2 cut(s) | 80, 625 |
| SinI | GGWCC | 1 cut(s) | 127 |
| Sse9I | AATT | 7 cut(s) | 19, 39, 88, 371, 450, 561, 569 |
| SsiI | CCGC | 2 cut(s) | 638, 670 |
| SspMI | CTAG | 3 cut(s) | 231, 687, 698 |
| StyD4I | CCNGG | 1 cut(s) | 464 |
| StyI | CCWWGG | 1 cut(s) | 485 |
| TaaI | ACNGT | 2 cut(s) | 131, 172 |
| TaiI | ACGT | 2 cut(s) | 113, 715 |
| TaqI | TCGA | 1 cut(s) | 289 |
| TasI | AATT | 7 cut(s) | 19, 39, 88, 371, 450, 561, 569 |
| TatI | WGTACW | 2 cut(s) | 597, 609 |
| TfiI | GAWTC | 4 cut(s) | 507, 586, 620, 641 |
| Tru1I | TTAA | 3 cut(s) | 86, 374, 528 |
| Tru9I | TTAA | 3 cut(s) | 86, 374, 528 |
| TseI | GCWGC | 2 cut(s) | 79, 253 |
| TspDTI | ATGAA | 3 cut(s) | 83, 443, 453 |
| VpaK11BI | GGWCC | 1 cut(s) | 127 |
| XapI | RAATTY | 2 cut(s) | 88, 450 |
| XceI | RCATGY | 1 cut(s) | 524 |
| XmiI | GTMKAC | 1 cut(s) | 289 |
| XspI | CTAG | 3 cut(s) | 231, 687, 698 |
| ZrmI | AGTACT | 1 cut(s) | 611 |