Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 242 |
| AciI | CCGC | 1 cut(s) | 320 |
| AclWI | GGATC | 1 cut(s) | 521 |
| AcsI | RAATTY | 1 cut(s) | 612 |
| AcuI | CTGAAG | 1 cut(s) | 149 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 47, 280 |
| AgsI | TTSAA | 3 cut(s) | 291, 315, 409 |
| AluBI | AGCT | 5 cut(s) | 72, 169, 370, 450, 589 |
| AluI | AGCT | 5 cut(s) | 72, 169, 370, 450, 589 |
| Alw26I | GTCTC | 2 cut(s) | 514, 553 |
| AlwI | GGATC | 1 cut(s) | 521 |
| ApeKI | GCWGC | 4 cut(s) | 334, 444, 447, 586 |
| ApoI | RAATTY | 1 cut(s) | 612 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 616 |
| BbsI | GAAGAC | 1 cut(s) | 85 |
| BbvI | GCAGC | 4 cut(s) | 321, 456, 459, 598 |
| BccI | CCATC | 2 cut(s) | 298, 426 |
| BclI | TGATCA | 2 cut(s) | 27, 606 |
| BcoDI | GTCTC | 2 cut(s) | 514, 553 |
| BfaI | CTAG | 1 cut(s) | 536 |
| BfmI | CTRYAG | 1 cut(s) | 413 |
| BisI | GCNGC | 4 cut(s) | 335, 445, 448, 587 |
| BlsI | GCNGC | 4 cut(s) | 336, 446, 449, 588 |
| BmiI | GGNNCC | 1 cut(s) | 272 |
| BmsI | GCATC | 3 cut(s) | 27, 604, 667 |
| BpiI | GAAGAC | 1 cut(s) | 85 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 120, 152 |
| BpmI | CTGGAG | 1 cut(s) | 538 |
| BpuEI | CTTGAG | 1 cut(s) | 562 |
| BsaI | GGTCTC | 1 cut(s) | 553 |
| BsaJI | CCNNGG | 1 cut(s) | 224 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 47, 280 |
| BseDI | CCNNGG | 1 cut(s) | 224 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 47, 280 |
| BseMII | CTCAG | 2 cut(s) | 34, 653 |
| BseRI | GAGGAG | 1 cut(s) | 263 |
| BseXI | GCAGC | 4 cut(s) | 321, 456, 459, 598 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 47, 280 |
| BsmAI | GTCTC | 2 cut(s) | 514, 553 |
| BsmI | GAATGC | 1 cut(s) | 394 |
| Bso31I | GGTCTC | 1 cut(s) | 553 |
| Bsp143I | GATC | 3 cut(s) | 27, 513, 606 |
| BspACI | CCGC | 1 cut(s) | 320 |
| BspCNI | CTCAG | 2 cut(s) | 35, 654 |
| BspLI | GGNNCC | 1 cut(s) | 272 |
| BspMAI | CTGCAG | 1 cut(s) | 417 |
| BspPI | GGATC | 1 cut(s) | 521 |
| BspTNI | GGTCTC | 1 cut(s) | 553 |
| BssECI | CCNNGG | 1 cut(s) | 224 |
| BssMI | GATC | 3 cut(s) | 27, 513, 606 |
| BssT1I | CCWWGG | 1 cut(s) | 224 |
| Bst4CI | ACNGT | 2 cut(s) | 10, 95 |
| Bst6I | CTCTTC | 2 cut(s) | 168, 246 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 421, 592 |
| BstC8I | GCNNGC | 1 cut(s) | 422 |
| BstDEI | CTNAG | 3 cut(s) | 43, 199, 662 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 278 |
| BstKTI | GATC | 3 cut(s) | 30, 516, 609 |
| BstMAI | GTCTC | 2 cut(s) | 514, 553 |
| BstMBI | GATC | 3 cut(s) | 27, 513, 606 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 175, 326, 421, 592 |
| BstNSI | RCATGY | 1 cut(s) | 424 |
| BstSFI | CTRYAG | 1 cut(s) | 413 |
| BstV1I | GCAGC | 4 cut(s) | 321, 456, 459, 598 |
| BstV2I | GAAGAC | 1 cut(s) | 85 |
| BstX2I | RGATCY | 1 cut(s) | 513 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 284 |
| BstYI | RGATCY | 1 cut(s) | 513 |
| BtsIMutI | CAGTG | 1 cut(s) | 6 |
| Cac8I | GCNNGC | 1 cut(s) | 422 |
| CviAII | CATG | 3 cut(s) | 139, 421, 592 |
| DdeI | CTNAG | 3 cut(s) | 43, 199, 662 |
| DpnI | GATC | 3 cut(s) | 29, 515, 608 |
| DpnII | GATC | 3 cut(s) | 27, 513, 606 |
| Eam1104I | CTCTTC | 2 cut(s) | 168, 246 |
| EarI | CTCTTC | 2 cut(s) | 168, 246 |
| EciI | GGCGGA | 1 cut(s) | 335 |
| Eco130I | CCWWGG | 1 cut(s) | 224 |
| Eco31I | GGTCTC | 1 cut(s) | 553 |
| Eco57I | CTGAAG | 1 cut(s) | 149 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 278 |
| EcoT14I | CCWWGG | 1 cut(s) | 224 |
| EcoT22I | ATGCAT | 1 cut(s) | 597 |
| ErhI | CCWWGG | 1 cut(s) | 224 |
| FaeI | CATG | 3 cut(s) | 142, 424, 595 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 283, 315 |
| FatI | CATG | 3 cut(s) | 138, 420, 591 |
| FbaI | TGATCA | 2 cut(s) | 27, 606 |
| Fnu4HI | GCNGC | 4 cut(s) | 335, 445, 448, 587 |
| Fsp4HI | GCNGC | 4 cut(s) | 335, 445, 448, 587 |
| FspBI | CTAG | 1 cut(s) | 536 |
| GluI | GCNGC | 4 cut(s) | 335, 445, 448, 587 |
| GsuI | CTGGAG | 1 cut(s) | 538 |
| Hin1II | CATG | 3 cut(s) | 142, 424, 595 |
| HincII | GTYRAC | 1 cut(s) | 191 |
| HindII | GTYRAC | 1 cut(s) | 191 |
| HinfI | GANTC | 1 cut(s) | 22 |
| Hpy166II | GTNNAC | 2 cut(s) | 191, 258 |
| Hpy188I | TCNGA | 4 cut(s) | 27, 66, 611, 663 |
| Hpy188III | TCNNGA | 4 cut(s) | 34, 75, 517, 621 |
| Hpy8I | GTNNAC | 2 cut(s) | 191, 258 |
| HpyAV | CCTTC | 1 cut(s) | 261 |
| HpyCH4III | ACNGT | 2 cut(s) | 10, 95 |
| HpyCH4V | TGCA | 7 cut(s) | 91, 415, 424, 550, 574, 595, 658 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 175, 326, 421, 592 |
| HpyF3I | CTNAG | 3 cut(s) | 43, 199, 662 |
| Hsp92II | CATG | 3 cut(s) | 142, 424, 595 |
| Ksp22I | TGATCA | 2 cut(s) | 27, 606 |
| Kzo9I | GATC | 3 cut(s) | 27, 513, 606 |
| LmnI | GCTCC | 3 cut(s) | 276, 367, 554 |
| LpnPI | CCDG | 4 cut(s) | 55, 502, 568, 606 |
| Lsp1109I | GCAGC | 4 cut(s) | 321, 456, 459, 598 |
| LweI | GCATC | 3 cut(s) | 27, 604, 667 |
| MaeI | CTAG | 1 cut(s) | 536 |
| MaeIII | GTNAC | 2 cut(s) | 4, 355 |
| MalI | GATC | 3 cut(s) | 29, 515, 608 |
| MboI | GATC | 3 cut(s) | 27, 513, 606 |
| MboII | GAAGA | 6 cut(s) | 90, 155, 263, 303, 397, 571 |
| MflI | RGATCY | 1 cut(s) | 513 |
| MluCI | AATT | 5 cut(s) | 204, 361, 531, 612, 653 |
| MnlI | CCTC | 5 cut(s) | 171, 227, 284, 383, 504 |
| Mph1103I | ATGCAT | 1 cut(s) | 597 |
| MroXI | GAANNNNTTC | 1 cut(s) | 616 |
| MseI | TTAA | 1 cut(s) | 349 |
| MslI | CAYNNNNRTG | 1 cut(s) | 35 |
| Mva1269I | GAATGC | 1 cut(s) | 394 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 175, 326, 421, 592 |
| NdeII | GATC | 3 cut(s) | 27, 513, 606 |
| NlaIII | CATG | 3 cut(s) | 142, 424, 595 |
| NlaIV | GGNNCC | 1 cut(s) | 272 |
| NmuCI | GTSAC | 1 cut(s) | 4 |
| NsiI | ATGCAT | 1 cut(s) | 597 |
| NspI | RCATGY | 1 cut(s) | 424 |
| PaeI | GCATGC | 1 cut(s) | 424 |
| PctI | GAATGC | 1 cut(s) | 394 |
| PdmI | GAANNNNTTC | 1 cut(s) | 616 |
| PfeI | GAWTC | 1 cut(s) | 22 |
| PkrI | GCNGC | 4 cut(s) | 336, 446, 449, 588 |
| PsiI | TTATAA | 1 cut(s) | 242 |
| PspN4I | GGNNCC | 1 cut(s) | 272 |
| PstI | CTGCAG | 1 cut(s) | 417 |
| PsuI | RGATCY | 1 cut(s) | 513 |
| RseI | CAYNNNNRTG | 1 cut(s) | 35 |
| SaqAI | TTAA | 1 cut(s) | 349 |
| SatI | GCNGC | 4 cut(s) | 335, 445, 448, 587 |
| Sau3AI | GATC | 3 cut(s) | 27, 513, 606 |
| SetI | ASST | 9 cut(s) | 58, 74, 163, 171, 230, 285, 372, 452, 591 |
| SfaNI | GCATC | 3 cut(s) | 27, 604, 667 |
| SfcI | CTRYAG | 1 cut(s) | 413 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 35 |
| SmlI | CTYRAG | 1 cut(s) | 541 |
| SmoI | CTYRAG | 1 cut(s) | 541 |
| SphI | GCATGC | 1 cut(s) | 424 |
| Sse9I | AATT | 5 cut(s) | 204, 361, 531, 612, 653 |
| SsiI | CCGC | 1 cut(s) | 320 |
| SspMI | CTAG | 1 cut(s) | 536 |
| StyI | CCWWGG | 1 cut(s) | 224 |
| TaaI | ACNGT | 2 cut(s) | 10, 95 |
| TaqI | TCGA | 1 cut(s) | 76 |
| TasI | AATT | 5 cut(s) | 204, 361, 531, 612, 653 |
| TfiI | GAWTC | 1 cut(s) | 22 |
| Tru1I | TTAA | 1 cut(s) | 349 |
| Tru9I | TTAA | 1 cut(s) | 349 |
| TscAI | CASTG | 1 cut(s) | 13 |
| TseFI | GTSAC | 1 cut(s) | 4 |
| TseI | GCWGC | 4 cut(s) | 334, 444, 447, 586 |
| Tsp45I | GTSAC | 1 cut(s) | 4 |
| TspRI | CASTG | 1 cut(s) | 13 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 278 |
| XapI | RAATTY | 1 cut(s) | 612 |
| XceI | RCATGY | 1 cut(s) | 424 |
| XmnI | GAANNNNTTC | 1 cut(s) | 616 |
| XspI | CTAG | 1 cut(s) | 536 |
| Zsp2I | ATGCAT | 1 cut(s) | 597 |