Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 5, 20, 46 |
| AcvI | CACGTG | 1 cut(s) | 53 |
| AfaI | GTAC | 3 cut(s) | 162, 295, 335 |
| AgsI | TTSAA | 1 cut(s) | 153 |
| AluBI | AGCT | 1 cut(s) | 141 |
| AluI | AGCT | 1 cut(s) | 141 |
| Alw21I | GWGCWC | 1 cut(s) | 143 |
| ApoI | RAATTY | 3 cut(s) | 5, 20, 46 |
| AseI | ATTAAT | 1 cut(s) | 354 |
| BanII | GRGCYC | 1 cut(s) | 143 |
| BbrPI | CACGTG | 1 cut(s) | 53 |
| Bbv12I | GWGCWC | 1 cut(s) | 143 |
| BfaI | CTAG | 2 cut(s) | 156, 216 |
| BfmI | CTRYAG | 1 cut(s) | 69 |
| BmsI | GCATC | 1 cut(s) | 262 |
| BsaAI | YACGTR | 1 cut(s) | 53 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 80, 110 |
| BseGI | GGATG | 1 cut(s) | 277 |
| BseMII | CTCAG | 1 cut(s) | 128 |
| BseRI | GAGGAG | 1 cut(s) | 263 |
| BsiHKAI | GWGCWC | 1 cut(s) | 143 |
| BslFI | GGGAC | 1 cut(s) | 307 |
| BsmFI | GGGAC | 1 cut(s) | 307 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp1407I | TGTACA | 1 cut(s) | 333 |
| BspCNI | CTCAG | 1 cut(s) | 129 |
| BspMAI | CTGCAG | 1 cut(s) | 73 |
| BsrGI | TGTACA | 1 cut(s) | 333 |
| Bst4CI | ACNGT | 1 cut(s) | 165 |
| BstAUI | TGTACA | 1 cut(s) | 333 |
| BstBAI | YACGTR | 1 cut(s) | 53 |
| BstDEI | CTNAG | 1 cut(s) | 137 |
| BstF5I | GGATG | 1 cut(s) | 277 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 212 |
| BstSFI | CTRYAG | 1 cut(s) | 69 |
| BtsCI | GGATG | 1 cut(s) | 277 |
| Csp6I | GTAC | 3 cut(s) | 161, 294, 334 |
| CviAII | CATG | 1 cut(s) | 257 |
| CviJI | RGCY | 6 cut(s) | 14, 108, 131, 141, 254, 375 |
| CviKI_1 | RGCY | 6 cut(s) | 14, 108, 131, 141, 254, 375 |
| CviQI | GTAC | 3 cut(s) | 161, 294, 334 |
| DdeI | CTNAG | 1 cut(s) | 137 |
| Ecl136II | GAGCTC | 1 cut(s) | 141 |
| Eco24I | GRGCYC | 1 cut(s) | 143 |
| Eco53kI | GAGCTC | 1 cut(s) | 141 |
| Eco72I | CACGTG | 1 cut(s) | 53 |
| EcoICRI | GAGCTC | 1 cut(s) | 141 |
| EcoT38I | GRGCYC | 1 cut(s) | 143 |
| FaeI | CATG | 1 cut(s) | 260 |
| FaqI | GGGAC | 1 cut(s) | 307 |
| FatI | CATG | 1 cut(s) | 256 |
| FokI | GGATG | 1 cut(s) | 284 |
| FriOI | GRGCYC | 1 cut(s) | 143 |
| FspBI | CTAG | 2 cut(s) | 156, 216 |
| Hin1II | CATG | 1 cut(s) | 260 |
| HinfI | GANTC | 1 cut(s) | 287 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 138 |
| Hpy188III | TCNNGA | 2 cut(s) | 176, 269 |
| HpyAV | CCTTC | 1 cut(s) | 305 |
| HpyCH4III | ACNGT | 1 cut(s) | 165 |
| HpyCH4IV | ACGT | 1 cut(s) | 52 |
| HpyCH4V | TGCA | 4 cut(s) | 71, 126, 194, 275 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 212 |
| HpyF3I | CTNAG | 1 cut(s) | 137 |
| HpySE526I | ACGT | 1 cut(s) | 52 |
| Hsp92II | CATG | 1 cut(s) | 260 |
| LpnPI | CCDG | 1 cut(s) | 254 |
| LweI | GCATC | 1 cut(s) | 262 |
| MaeI | CTAG | 2 cut(s) | 156, 216 |
| MaeII | ACGT | 1 cut(s) | 52 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MluCI | AATT | 3 cut(s) | 5, 20, 46 |
| MnlI | CCTC | 7 cut(s) | 82, 112, 221, 241, 244, 277, 337 |
| MseI | TTAA | 2 cut(s) | 75, 354 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 212 |
| NlaIII | CATG | 1 cut(s) | 260 |
| PfeI | GAWTC | 1 cut(s) | 287 |
| PmaCI | CACGTG | 1 cut(s) | 53 |
| PmlI | CACGTG | 1 cut(s) | 53 |
| Ppu21I | YACGTR | 1 cut(s) | 53 |
| PshBI | ATTAAT | 1 cut(s) | 354 |
| Psp124BI | GAGCTC | 1 cut(s) | 143 |
| PspCI | CACGTG | 1 cut(s) | 53 |
| PstI | CTGCAG | 1 cut(s) | 73 |
| RsaI | GTAC | 3 cut(s) | 162, 295, 335 |
| RsaNI | GTAC | 3 cut(s) | 161, 294, 334 |
| SacI | GAGCTC | 1 cut(s) | 143 |
| SaqAI | TTAA | 2 cut(s) | 75, 354 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SetI | ASST | 4 cut(s) | 55, 143, 213, 316 |
| SfaNI | GCATC | 1 cut(s) | 262 |
| SfcI | CTRYAG | 1 cut(s) | 69 |
| Sse9I | AATT | 3 cut(s) | 5, 20, 46 |
| SspI | AATATT | 1 cut(s) | 361 |
| SspMI | CTAG | 2 cut(s) | 156, 216 |
| SstI | GAGCTC | 1 cut(s) | 143 |
| TaaI | ACNGT | 1 cut(s) | 165 |
| TaiI | ACGT | 1 cut(s) | 55 |
| TaqI | TCGA | 1 cut(s) | 304 |
| TasI | AATT | 3 cut(s) | 5, 20, 46 |
| TatI | WGTACW | 3 cut(s) | 160, 293, 333 |
| TfiI | GAWTC | 1 cut(s) | 287 |
| Tru1I | TTAA | 2 cut(s) | 75, 354 |
| Tru9I | TTAA | 2 cut(s) | 75, 354 |
| VspI | ATTAAT | 1 cut(s) | 354 |
| XapI | RAATTY | 3 cut(s) | 5, 20, 46 |
| XspI | CTAG | 2 cut(s) | 156, 216 |