Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 281 |
| AcsI | RAATTY | 1 cut(s) | 272 |
| AfaI | GTAC | 2 cut(s) | 307, 484 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 399 |
| AgsI | TTSAA | 1 cut(s) | 350 |
| AjnI | CCWGG | 1 cut(s) | 220 |
| AluBI | AGCT | 3 cut(s) | 438, 500, 512 |
| AluI | AGCT | 3 cut(s) | 438, 500, 512 |
| Alw26I | GTCTC | 1 cut(s) | 138 |
| AoxI | GGCC | 2 cut(s) | 62, 285 |
| ApeKI | GCWGC | 1 cut(s) | 293 |
| ApoI | RAATTY | 1 cut(s) | 272 |
| AspS9I | GGNCC | 3 cut(s) | 225, 402, 413 |
| AsuC2I | CCSGG | 1 cut(s) | 457 |
| AsuHPI | GGTGA | 1 cut(s) | 445 |
| AsuII | TTCGAA | 1 cut(s) | 382 |
| AvaII | GGWCC | 3 cut(s) | 225, 402, 413 |
| BbvI | GCAGC | 1 cut(s) | 280 |
| BccI | CCATC | 2 cut(s) | 200, 313 |
| BciT130I | CCWGG | 1 cut(s) | 222 |
| BciVI | GTATCC | 1 cut(s) | 421 |
| BcnI | CCSGG | 1 cut(s) | 457 |
| BcoDI | GTCTC | 1 cut(s) | 138 |
| BfmI | CTRYAG | 1 cut(s) | 98 |
| BfuI | GTATCC | 1 cut(s) | 421 |
| BisI | GCNGC | 1 cut(s) | 294 |
| BlsI | GCNGC | 1 cut(s) | 295 |
| Bme1390I | CCNGG | 2 cut(s) | 222, 457 |
| Bme18I | GGWCC | 3 cut(s) | 225, 402, 413 |
| BmgT120I | GGNCC | 3 cut(s) | 225, 402, 413 |
| BmiI | GGNNCC | 1 cut(s) | 226 |
| BmrFI | CCNGG | 2 cut(s) | 222, 457 |
| BmsI | GCATC | 2 cut(s) | 95, 346 |
| BpmI | CTGGAG | 1 cut(s) | 347 |
| Bpu14I | TTCGAA | 1 cut(s) | 382 |
| BpuMI | CCSGG | 1 cut(s) | 457 |
| BsaI | GGTCTC | 1 cut(s) | 138 |
| BsaJI | CCNNGG | 5 cut(s) | 221, 228, 264, 288, 456 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 399 |
| Bse1I | ACTGG | 1 cut(s) | 551 |
| BseBI | CCWGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 5 cut(s) | 221, 228, 264, 288, 456 |
| BseGI | GGATG | 1 cut(s) | 211 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 399 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseNI | ACTGG | 1 cut(s) | 551 |
| BseXI | GCAGC | 1 cut(s) | 280 |
| BshFI | GGCC | 2 cut(s) | 64, 287 |
| BsiSI | CCGG | 1 cut(s) | 456 |
| BslFI | GGGAC | 1 cut(s) | 238 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 399 |
| BsmAI | GTCTC | 1 cut(s) | 138 |
| BsmFI | GGGAC | 1 cut(s) | 238 |
| BsnI | GGCC | 2 cut(s) | 64, 287 |
| Bso31I | GGTCTC | 1 cut(s) | 138 |
| Bsp119I | TTCGAA | 1 cut(s) | 382 |
| Bsp143I | GATC | 2 cut(s) | 366, 450 |
| BspACI | CCGC | 1 cut(s) | 281 |
| BspANI | GGCC | 2 cut(s) | 64, 287 |
| BspCNI | CTCAG | 1 cut(s) | 84 |
| BspLI | GGNNCC | 1 cut(s) | 226 |
| BspT104I | TTCGAA | 1 cut(s) | 382 |
| BspTNI | GGTCTC | 1 cut(s) | 138 |
| BsrI | ACTGG | 1 cut(s) | 551 |
| BssECI | CCNNGG | 5 cut(s) | 221, 228, 264, 288, 456 |
| BssMI | GATC | 2 cut(s) | 366, 450 |
| BssT1I | CCWWGG | 1 cut(s) | 288 |
| Bst2UI | CCWGG | 1 cut(s) | 222 |
| Bst4CI | ACNGT | 1 cut(s) | 188 |
| BstBI | TTCGAA | 1 cut(s) | 382 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 440 |
| BstDEI | CTNAG | 1 cut(s) | 92 |
| BstDSI | CCRYGG | 2 cut(s) | 228, 264 |
| BstF5I | GGATG | 1 cut(s) | 211 |
| BstKTI | GATC | 2 cut(s) | 369, 453 |
| BstMAI | GTCTC | 1 cut(s) | 138 |
| BstMBI | GATC | 2 cut(s) | 366, 450 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 293, 518 |
| BstNI | CCWGG | 1 cut(s) | 222 |
| BstNSI | RCATGY | 1 cut(s) | 86 |
| BstSCI | CCNGG | 2 cut(s) | 220, 455 |
| BstSFI | CTRYAG | 1 cut(s) | 98 |
| BstV1I | GCAGC | 1 cut(s) | 280 |
| BsuI | GTATCC | 1 cut(s) | 421 |
| BsuRI | GGCC | 2 cut(s) | 64, 287 |
| BtgI | CCRYGG | 2 cut(s) | 228, 264 |
| BtgZI | GCGATG | 1 cut(s) | 332 |
| BtsCI | GGATG | 1 cut(s) | 211 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 440 |
| Cfr13I | GGNCC | 3 cut(s) | 225, 402, 413 |
| Csp6I | GTAC | 2 cut(s) | 306, 483 |
| CviAII | CATG | 2 cut(s) | 83, 179 |
| CviJI | RGCY | 8 cut(s) | 64, 97, 220, 287, 293, 438, 500, 512 |
| CviKI_1 | RGCY | 8 cut(s) | 64, 97, 220, 287, 293, 438, 500, 512 |
| CviQI | GTAC | 2 cut(s) | 306, 483 |
| DdeI | CTNAG | 1 cut(s) | 92 |
| DpnI | GATC | 2 cut(s) | 368, 452 |
| DpnII | GATC | 2 cut(s) | 366, 450 |
| EciI | GGCGGA | 1 cut(s) | 296 |
| Eco130I | CCWWGG | 1 cut(s) | 288 |
| Eco147I | AGGCCT | 2 cut(s) | 64, 287 |
| Eco31I | GGTCTC | 1 cut(s) | 138 |
| Eco47I | GGWCC | 3 cut(s) | 225, 402, 413 |
| EcoO109I | RGGNCCY | 1 cut(s) | 413 |
| EcoRII | CCWGG | 1 cut(s) | 220 |
| EcoT14I | CCWWGG | 1 cut(s) | 288 |
| EcoT22I | ATGCAT | 1 cut(s) | 88 |
| ErhI | CCWWGG | 1 cut(s) | 288 |
| FaeI | CATG | 2 cut(s) | 86, 182 |
| FaiI | YATR | 8 cut(s) | 43, 84, 180, 395, 410, 474, 528, 544 |
| FaqI | GGGAC | 1 cut(s) | 238 |
| FatI | CATG | 2 cut(s) | 82, 178 |
| Fnu4HI | GCNGC | 1 cut(s) | 294 |
| FokI | GGATG | 1 cut(s) | 218 |
| Fsp4HI | GCNGC | 1 cut(s) | 294 |
| GluI | GCNGC | 1 cut(s) | 294 |
| GsuI | CTGGAG | 1 cut(s) | 347 |
| HaeIII | GGCC | 2 cut(s) | 64, 287 |
| HapII | CCGG | 1 cut(s) | 456 |
| Hin1II | CATG | 2 cut(s) | 86, 182 |
| HinfI | GANTC | 1 cut(s) | 260 |
| HpaII | CCGG | 1 cut(s) | 456 |
| HphI | GGTGA | 1 cut(s) | 445 |
| Hpy188I | TCNGA | 1 cut(s) | 93 |
| Hpy188III | TCNNGA | 1 cut(s) | 364 |
| Hpy99I | CGWCG | 1 cut(s) | 483 |
| HpyAV | CCTTC | 1 cut(s) | 455 |
| HpyCH4III | ACNGT | 1 cut(s) | 188 |
| HpyCH4V | TGCA | 4 cut(s) | 82, 86, 296, 526 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 293, 518 |
| HpyF3I | CTNAG | 1 cut(s) | 92 |
| Hsp92II | CATG | 2 cut(s) | 86, 182 |
| Kzo9I | GATC | 2 cut(s) | 366, 450 |
| LpnPI | CCDG | 9 cut(s) | 78, 86, 207, 234, 288, 377, 429, 469, 532 |
| Lsp1109I | GCAGC | 1 cut(s) | 280 |
| LweI | GCATC | 2 cut(s) | 95, 346 |
| MaeIII | GTNAC | 1 cut(s) | 370 |
| MalI | GATC | 2 cut(s) | 368, 452 |
| MboI | GATC | 2 cut(s) | 366, 450 |
| MluCI | AATT | 3 cut(s) | 15, 121, 272 |
| MlyI | GAGTC | 1 cut(s) | 254 |
| MnlI | CCTC | 4 cut(s) | 87, 226, 277, 418 |
| Mph1103I | ATGCAT | 1 cut(s) | 88 |
| MseI | TTAA | 2 cut(s) | 117, 192 |
| MspI | CCGG | 1 cut(s) | 456 |
| MspR9I | CCNGG | 2 cut(s) | 222, 457 |
| MvaI | CCWGG | 1 cut(s) | 222 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 293, 518 |
| NciI | CCSGG | 1 cut(s) | 457 |
| NdeII | GATC | 2 cut(s) | 366, 450 |
| NlaIII | CATG | 2 cut(s) | 86, 182 |
| NlaIV | GGNNCC | 1 cut(s) | 226 |
| NsiI | ATGCAT | 1 cut(s) | 88 |
| NspI | RCATGY | 1 cut(s) | 86 |
| NspV | TTCGAA | 1 cut(s) | 382 |
| PaeI | GCATGC | 1 cut(s) | 86 |
| PceI | AGGCCT | 2 cut(s) | 64, 287 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 511 |
| PkrI | GCNGC | 1 cut(s) | 295 |
| PleI | GAGTC | 1 cut(s) | 254 |
| PpsI | GAGTC | 1 cut(s) | 254 |
| PpuMI | RGGWCCY | 1 cut(s) | 413 |
| Psp5II | RGGWCCY | 1 cut(s) | 413 |
| Psp6I | CCWGG | 1 cut(s) | 220 |
| PspGI | CCWGG | 1 cut(s) | 220 |
| PspN4I | GGNNCC | 1 cut(s) | 226 |
| PspPI | GGNCC | 3 cut(s) | 225, 402, 413 |
| PspPPI | RGGWCCY | 1 cut(s) | 413 |
| RsaI | GTAC | 2 cut(s) | 307, 484 |
| RsaNI | GTAC | 2 cut(s) | 306, 483 |
| SaqAI | TTAA | 2 cut(s) | 117, 192 |
| SatI | GCNGC | 1 cut(s) | 294 |
| Sau3AI | GATC | 2 cut(s) | 366, 450 |
| Sau96I | GGNCC | 3 cut(s) | 225, 402, 413 |
| SchI | GAGTC | 1 cut(s) | 254 |
| ScrFI | CCNGG | 2 cut(s) | 222, 457 |
| SetI | ASST | 8 cut(s) | 151, 307, 404, 418, 440, 466, 502, 514 |
| SfaNI | GCATC | 2 cut(s) | 95, 346 |
| SfcI | CTRYAG | 1 cut(s) | 98 |
| SfuI | TTCGAA | 1 cut(s) | 382 |
| SinI | GGWCC | 3 cut(s) | 225, 402, 413 |
| SphI | GCATGC | 1 cut(s) | 86 |
| Sse9I | AATT | 3 cut(s) | 15, 121, 272 |
| SseBI | AGGCCT | 2 cut(s) | 64, 287 |
| SsiI | CCGC | 1 cut(s) | 281 |
| SspI | AATATT | 1 cut(s) | 312 |
| StuI | AGGCCT | 2 cut(s) | 64, 287 |
| StyD4I | CCNGG | 2 cut(s) | 220, 455 |
| StyI | CCWWGG | 1 cut(s) | 288 |
| TaaI | ACNGT | 1 cut(s) | 188 |
| TaqI | TCGA | 2 cut(s) | 382, 552 |
| TasI | AATT | 3 cut(s) | 15, 121, 272 |
| Tru1I | TTAA | 2 cut(s) | 117, 192 |
| Tru9I | TTAA | 2 cut(s) | 117, 192 |
| TseI | GCWGC | 1 cut(s) | 293 |
| TspGWI | ACGGA | 3 cut(s) | 43, 245, 394 |
| VpaK11BI | GGWCC | 3 cut(s) | 225, 402, 413 |
| XapI | RAATTY | 1 cut(s) | 272 |
| XceI | RCATGY | 1 cut(s) | 86 |
| Zsp2I | ATGCAT | 1 cut(s) | 88 |