Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 83 |
| AfaI | GTAC | 4 cut(s) | 174, 207, 307, 347 |
| AgsI | TTSAA | 2 cut(s) | 56, 165 |
| AjnI | CCWGG | 1 cut(s) | 18 |
| AluBI | AGCT | 2 cut(s) | 8, 153 |
| AluI | AGCT | 2 cut(s) | 8, 153 |
| Alw21I | GWGCWC | 1 cut(s) | 155 |
| Alw26I | GTCTC | 2 cut(s) | 17, 260 |
| Ama87I | CYCGRG | 1 cut(s) | 315 |
| AseI | ATTAAT | 1 cut(s) | 366 |
| AsuHPI | GGTGA | 2 cut(s) | 20, 332 |
| AvaI | CYCGRG | 1 cut(s) | 315 |
| BanII | GRGCYC | 1 cut(s) | 155 |
| Bbv12I | GWGCWC | 1 cut(s) | 155 |
| BciT130I | CCWGG | 1 cut(s) | 20 |
| BclI | TGATCA | 1 cut(s) | 39 |
| BcoDI | GTCTC | 2 cut(s) | 17, 260 |
| BfaI | CTAG | 1 cut(s) | 156 |
| BfmI | CTRYAG | 1 cut(s) | 69 |
| Bme1390I | CCNGG | 1 cut(s) | 20 |
| BmeT110I | CYCGRG | 1 cut(s) | 315 |
| BmrFI | CCNGG | 1 cut(s) | 20 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 29 |
| BsaI | GGTCTC | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 1 cut(s) | 31 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 92, 122 |
| BseBI | CCWGG | 1 cut(s) | 20 |
| BseDI | CCNNGG | 1 cut(s) | 31 |
| BseMII | CTCAG | 1 cut(s) | 140 |
| BseRI | GAGGAG | 2 cut(s) | 5, 278 |
| BsiHKAI | GWGCWC | 1 cut(s) | 155 |
| BsiHKCI | CYCGRG | 1 cut(s) | 315 |
| BslFI | GGGAC | 1 cut(s) | 319 |
| BsmAI | GTCTC | 2 cut(s) | 17, 260 |
| BsmFI | GGGAC | 1 cut(s) | 319 |
| Bso31I | GGTCTC | 1 cut(s) | 17 |
| BsoBI | CYCGRG | 1 cut(s) | 315 |
| Bsp1286I | GDGCHC | 1 cut(s) | 155 |
| Bsp1407I | TGTACA | 2 cut(s) | 205, 345 |
| Bsp143I | GATC | 1 cut(s) | 39 |
| BspACI | CCGC | 1 cut(s) | 83 |
| BspCNI | CTCAG | 1 cut(s) | 141 |
| BspHI | TCATGA | 1 cut(s) | 187 |
| BspTNI | GGTCTC | 1 cut(s) | 17 |
| BsrGI | TGTACA | 2 cut(s) | 205, 345 |
| BssECI | CCNNGG | 1 cut(s) | 31 |
| BssMI | GATC | 1 cut(s) | 39 |
| BssT1I | CCWWGG | 1 cut(s) | 31 |
| Bst2UI | CCWGG | 1 cut(s) | 20 |
| Bst4CI | ACNGT | 1 cut(s) | 177 |
| BstAUI | TGTACA | 2 cut(s) | 205, 345 |
| BstDEI | CTNAG | 1 cut(s) | 149 |
| BstKTI | GATC | 1 cut(s) | 42 |
| BstMAI | GTCTC | 2 cut(s) | 17, 260 |
| BstMBI | GATC | 1 cut(s) | 39 |
| BstNI | CCWGG | 1 cut(s) | 20 |
| BstSCI | CCNGG | 1 cut(s) | 18 |
| BstSFI | CTRYAG | 1 cut(s) | 69 |
| CciI | TCATGA | 1 cut(s) | 187 |
| CseI | GACGC | 1 cut(s) | 296 |
| Csp6I | GTAC | 4 cut(s) | 173, 206, 306, 346 |
| CviAII | CATG | 2 cut(s) | 37, 188 |
| CviJI | RGCY | 5 cut(s) | 8, 23, 120, 143, 153 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 23, 120, 143, 153 |
| CviQI | GTAC | 4 cut(s) | 173, 206, 306, 346 |
| DdeI | CTNAG | 1 cut(s) | 149 |
| DpnI | GATC | 1 cut(s) | 41 |
| DpnII | GATC | 1 cut(s) | 39 |
| Ecl136II | GAGCTC | 1 cut(s) | 153 |
| Eco130I | CCWWGG | 1 cut(s) | 31 |
| Eco24I | GRGCYC | 1 cut(s) | 155 |
| Eco31I | GGTCTC | 1 cut(s) | 17 |
| Eco53kI | GAGCTC | 1 cut(s) | 153 |
| Eco88I | CYCGRG | 1 cut(s) | 315 |
| EcoICRI | GAGCTC | 1 cut(s) | 153 |
| EcoRII | CCWGG | 1 cut(s) | 18 |
| EcoT14I | CCWWGG | 1 cut(s) | 31 |
| EcoT38I | GRGCYC | 1 cut(s) | 155 |
| ErhI | CCWWGG | 1 cut(s) | 31 |
| FaeI | CATG | 2 cut(s) | 40, 191 |
| FaiI | YATR | 9 cut(s) | 38, 71, 98, 182, 184, 189, 210, 330, 332 |
| FaqI | GGGAC | 1 cut(s) | 319 |
| FatI | CATG | 2 cut(s) | 36, 187 |
| FbaI | TGATCA | 1 cut(s) | 39 |
| FriOI | GRGCYC | 1 cut(s) | 155 |
| FspBI | CTAG | 1 cut(s) | 156 |
| HgaI | GACGC | 1 cut(s) | 296 |
| Hin1II | CATG | 2 cut(s) | 40, 191 |
| HinfI | GANTC | 1 cut(s) | 268 |
| HphI | GGTGA | 2 cut(s) | 20, 332 |
| Hpy188I | TCNGA | 2 cut(s) | 112, 150 |
| Hpy188III | TCNNGA | 2 cut(s) | 188, 284 |
| HpyAV | CCTTC | 1 cut(s) | 317 |
| HpyCH4III | ACNGT | 1 cut(s) | 177 |
| HpyCH4IV | ACGT | 1 cut(s) | 232 |
| HpyCH4V | TGCA | 1 cut(s) | 138 |
| HpyF3I | CTNAG | 1 cut(s) | 149 |
| HpySE526I | ACGT | 1 cut(s) | 232 |
| Hsp92II | CATG | 2 cut(s) | 40, 191 |
| Ksp22I | TGATCA | 1 cut(s) | 39 |
| Kzo9I | GATC | 1 cut(s) | 39 |
| LpnPI | CCDG | 4 cut(s) | 5, 32, 269, 285 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MaeII | ACGT | 1 cut(s) | 232 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MalI | GATC | 1 cut(s) | 41 |
| MboI | GATC | 1 cut(s) | 39 |
| MhlI | GDGCHC | 1 cut(s) | 155 |
| MluCI | AATT | 1 cut(s) | 114 |
| MlyI | GAGTC | 1 cut(s) | 262 |
| MnlI | CCTC | 6 cut(s) | 26, 94, 124, 233, 256, 311 |
| MseI | TTAA | 2 cut(s) | 87, 366 |
| MspR9I | CCNGG | 1 cut(s) | 20 |
| MvaI | CCWGG | 1 cut(s) | 20 |
| NdeII | GATC | 1 cut(s) | 39 |
| NlaIII | CATG | 2 cut(s) | 40, 191 |
| PaeR7I | CTCGAG | 1 cut(s) | 315 |
| PagI | TCATGA | 1 cut(s) | 187 |
| PleI | GAGTC | 1 cut(s) | 262 |
| PpsI | GAGTC | 1 cut(s) | 262 |
| PshBI | ATTAAT | 1 cut(s) | 366 |
| Psp124BI | GAGCTC | 1 cut(s) | 155 |
| Psp6I | CCWGG | 1 cut(s) | 18 |
| PspGI | CCWGG | 1 cut(s) | 18 |
| PspXI | VCTCGAGB | 1 cut(s) | 315 |
| RsaI | GTAC | 4 cut(s) | 174, 207, 307, 347 |
| RsaNI | GTAC | 4 cut(s) | 173, 206, 306, 346 |
| SacI | GAGCTC | 1 cut(s) | 155 |
| SaqAI | TTAA | 2 cut(s) | 87, 366 |
| Sau3AI | GATC | 1 cut(s) | 39 |
| SchI | GAGTC | 1 cut(s) | 262 |
| ScrFI | CCNGG | 1 cut(s) | 20 |
| SduI | GDGCHC | 1 cut(s) | 155 |
| SetI | ASST | 6 cut(s) | 10, 155, 225, 235, 322, 328 |
| SfcI | CTRYAG | 1 cut(s) | 69 |
| Sfr274I | CTCGAG | 1 cut(s) | 315 |
| SlaI | CTCGAG | 1 cut(s) | 315 |
| SmlI | CTYRAG | 1 cut(s) | 315 |
| SmoI | CTYRAG | 1 cut(s) | 315 |
| Sse9I | AATT | 1 cut(s) | 114 |
| SsiI | CCGC | 1 cut(s) | 83 |
| SspI | AATATT | 2 cut(s) | 46, 373 |
| SspMI | CTAG | 1 cut(s) | 156 |
| SstI | GAGCTC | 1 cut(s) | 155 |
| StyD4I | CCNGG | 1 cut(s) | 18 |
| StyI | CCWWGG | 1 cut(s) | 31 |
| TaaI | ACNGT | 1 cut(s) | 177 |
| TaiI | ACGT | 1 cut(s) | 235 |
| TaqI | TCGA | 1 cut(s) | 316 |
| TasI | AATT | 1 cut(s) | 114 |
| TatI | WGTACW | 3 cut(s) | 205, 305, 345 |
| Tru1I | TTAA | 2 cut(s) | 87, 366 |
| Tru9I | TTAA | 2 cut(s) | 87, 366 |
| TspDTI | ATGAA | 1 cut(s) | 204 |
| VspI | ATTAAT | 1 cut(s) | 366 |
| XhoI | CTCGAG | 1 cut(s) | 315 |
| XspI | CTAG | 1 cut(s) | 156 |