Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 88 - 210 | 4.1e-25 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 158 |
| AccB1I | GGYRCC | 1 cut(s) | 272 |
| AcsI | RAATTY | 1 cut(s) | 53 |
| AcuI | CTGAAG | 1 cut(s) | 275 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 245 |
| AgsI | TTSAA | 6 cut(s) | 127, 336, 458, 472, 482, 533 |
| AjnI | CCWGG | 1 cut(s) | 150 |
| AluBI | AGCT | 1 cut(s) | 616 |
| AluI | AGCT | 1 cut(s) | 616 |
| AoxI | GGCC | 2 cut(s) | 258, 676 |
| ApeKI | GCWGC | 2 cut(s) | 425, 605 |
| ApoI | RAATTY | 1 cut(s) | 53 |
| AspA2I | CCTAGG | 1 cut(s) | 673 |
| AspLEI | GCGC | 1 cut(s) | 159 |
| AspS9I | GGNCC | 1 cut(s) | 81 |
| AvaII | GGWCC | 1 cut(s) | 81 |
| AvrII | CCTAGG | 1 cut(s) | 673 |
| BanI | GGYRCC | 1 cut(s) | 272 |
| BbsI | GAAGAC | 1 cut(s) | 546 |
| BbvI | GCAGC | 2 cut(s) | 412, 617 |
| BccI | CCATC | 2 cut(s) | 263, 500 |
| BciT130I | CCWGG | 1 cut(s) | 152 |
| BfaI | CTAG | 4 cut(s) | 117, 243, 651, 674 |
| BfmI | CTRYAG | 1 cut(s) | 426 |
| BisI | GCNGC | 2 cut(s) | 426, 606 |
| BlnI | CCTAGG | 1 cut(s) | 673 |
| BlsI | GCNGC | 2 cut(s) | 427, 607 |
| Bme1390I | CCNGG | 1 cut(s) | 152 |
| Bme18I | GGWCC | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 1 cut(s) | 81 |
| BmiI | GGNNCC | 4 cut(s) | 20, 274, 444, 545 |
| BmrFI | CCNGG | 1 cut(s) | 152 |
| BmsI | GCATC | 2 cut(s) | 145, 494 |
| BoxI | GACNNNNGTC | 1 cut(s) | 112 |
| BpiI | GAAGAC | 1 cut(s) | 546 |
| BsaJI | CCNNGG | 2 cut(s) | 218, 673 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 494, 524 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 245 |
| BseBI | CCWGG | 1 cut(s) | 152 |
| BseDI | CCNNGG | 2 cut(s) | 218, 673 |
| BseGI | GGATG | 1 cut(s) | 511 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 245 |
| BseMII | CTCAG | 1 cut(s) | 59 |
| BseRI | GAGGAG | 2 cut(s) | 228, 515 |
| BseXI | GCAGC | 2 cut(s) | 412, 617 |
| BshFI | GGCC | 2 cut(s) | 260, 678 |
| BshNI | GGYRCC | 1 cut(s) | 272 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 245 |
| BsnI | GGCC | 2 cut(s) | 260, 678 |
| BspANI | GGCC | 2 cut(s) | 260, 678 |
| BspCNI | CTCAG | 1 cut(s) | 58 |
| BspLI | GGNNCC | 4 cut(s) | 20, 274, 444, 545 |
| BspMAI | CTGCAG | 1 cut(s) | 430 |
| BspQI | GCTCTTC | 1 cut(s) | 66 |
| BspT107I | GGYRCC | 1 cut(s) | 272 |
| BssECI | CCNNGG | 2 cut(s) | 218, 673 |
| BssT1I | CCWWGG | 2 cut(s) | 218, 673 |
| Bst2UI | CCWGG | 1 cut(s) | 152 |
| Bst6I | CTCTTC | 1 cut(s) | 66 |
| BstC8I | GCNNGC | 1 cut(s) | 618 |
| BstDEI | CTNAG | 4 cut(s) | 45, 489, 621, 687 |
| BstF5I | GGATG | 1 cut(s) | 511 |
| BstHHI | GCGC | 1 cut(s) | 159 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 626 |
| BstNI | CCWGG | 1 cut(s) | 152 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 112 |
| BstSCI | CCNGG | 1 cut(s) | 150 |
| BstSFI | CTRYAG | 1 cut(s) | 426 |
| BstV1I | GCAGC | 2 cut(s) | 412, 617 |
| BstV2I | GAAGAC | 1 cut(s) | 546 |
| BsuRI | GGCC | 2 cut(s) | 260, 678 |
| BtsCI | GGATG | 1 cut(s) | 511 |
| Cac8I | GCNNGC | 1 cut(s) | 618 |
| CfoI | GCGC | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 1 cut(s) | 81 |
| CviAII | CATG | 1 cut(s) | 581 |
| DdeI | CTNAG | 4 cut(s) | 45, 489, 621, 687 |
| Eam1104I | CTCTTC | 1 cut(s) | 66 |
| EarI | CTCTTC | 1 cut(s) | 66 |
| Eco130I | CCWWGG | 2 cut(s) | 218, 673 |
| Eco147I | AGGCCT | 1 cut(s) | 678 |
| Eco32I | GATATC | 1 cut(s) | 538 |
| Eco47I | GGWCC | 1 cut(s) | 81 |
| Eco57I | CTGAAG | 1 cut(s) | 275 |
| EcoRII | CCWGG | 1 cut(s) | 150 |
| EcoRV | GATATC | 1 cut(s) | 538 |
| EcoT14I | CCWWGG | 2 cut(s) | 218, 673 |
| ErhI | CCWWGG | 2 cut(s) | 218, 673 |
| FaeI | CATG | 1 cut(s) | 584 |
| FaiI | YATR | 5 cut(s) | 86, 88, 112, 398, 582 |
| FatI | CATG | 1 cut(s) | 580 |
| FauNDI | CATATG | 1 cut(s) | 86 |
| Fnu4HI | GCNGC | 2 cut(s) | 426, 606 |
| FokI | GGATG | 1 cut(s) | 518 |
| Fsp4HI | GCNGC | 2 cut(s) | 426, 606 |
| FspBI | CTAG | 4 cut(s) | 117, 243, 651, 674 |
| FspI | TGCGCA | 1 cut(s) | 158 |
| GlaI | GCGC | 1 cut(s) | 158 |
| GluI | GCNGC | 2 cut(s) | 426, 606 |
| HaeIII | GGCC | 2 cut(s) | 260, 678 |
| HhaI | GCGC | 1 cut(s) | 159 |
| Hin1II | CATG | 1 cut(s) | 584 |
| Hin6I | GCGC | 1 cut(s) | 157 |
| HinP1I | GCGC | 1 cut(s) | 157 |
| HindIII | AAGCTT | 1 cut(s) | 614 |
| HinfI | GANTC | 6 cut(s) | 37, 100, 287, 323, 458, 593 |
| Hpy166II | GTNNAC | 1 cut(s) | 145 |
| Hpy188I | TCNGA | 3 cut(s) | 320, 463, 640 |
| Hpy188III | TCNNGA | 3 cut(s) | 47, 192, 284 |
| Hpy8I | GTNNAC | 1 cut(s) | 145 |
| HpyAV | CCTTC | 3 cut(s) | 85, 250, 573 |
| HpyCH4IV | ACGT | 1 cut(s) | 196 |
| HpyCH4V | TGCA | 2 cut(s) | 136, 428 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 626 |
| HpyF3I | CTNAG | 4 cut(s) | 45, 489, 621, 687 |
| HpySE526I | ACGT | 1 cut(s) | 196 |
| Hsp92II | CATG | 1 cut(s) | 584 |
| HspAI | GCGC | 1 cut(s) | 157 |
| LguI | GCTCTTC | 1 cut(s) | 66 |
| LmnI | GCTCC | 2 cut(s) | 24, 448 |
| Lsp1109I | GCAGC | 2 cut(s) | 412, 617 |
| LweI | GCATC | 2 cut(s) | 145, 494 |
| MaeI | CTAG | 4 cut(s) | 117, 243, 651, 674 |
| MaeII | ACGT | 1 cut(s) | 196 |
| MboII | GAAGA | 4 cut(s) | 53, 65, 545, 546 |
| MfeI | CAATTG | 1 cut(s) | 336 |
| MluCI | AATT | 4 cut(s) | 23, 53, 336, 473 |
| MlyI | GAGTC | 1 cut(s) | 602 |
| MmeI | TCCRAC | 1 cut(s) | 621 |
| MseI | TTAA | 1 cut(s) | 279 |
| MslI | CAYNNNNRTG | 1 cut(s) | 490 |
| MspR9I | CCNGG | 1 cut(s) | 152 |
| MunI | CAATTG | 1 cut(s) | 336 |
| MvaI | CCWGG | 1 cut(s) | 152 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 626 |
| NdeI | CATATG | 1 cut(s) | 86 |
| NlaIII | CATG | 1 cut(s) | 584 |
| NlaIV | GGNNCC | 4 cut(s) | 20, 274, 444, 545 |
| NsbI | TGCGCA | 1 cut(s) | 158 |
| PceI | AGGCCT | 1 cut(s) | 678 |
| PciSI | GCTCTTC | 1 cut(s) | 66 |
| PfeI | GAWTC | 5 cut(s) | 37, 100, 287, 323, 458 |
| PkrI | GCNGC | 2 cut(s) | 427, 607 |
| PleI | GAGTC | 1 cut(s) | 601 |
| PpsI | GAGTC | 1 cut(s) | 601 |
| PshAI | GACNNNNGTC | 1 cut(s) | 112 |
| Psp6I | CCWGG | 1 cut(s) | 150 |
| PspGI | CCWGG | 1 cut(s) | 150 |
| PspN4I | GGNNCC | 4 cut(s) | 20, 274, 444, 545 |
| PspPI | GGNCC | 1 cut(s) | 81 |
| PstI | CTGCAG | 1 cut(s) | 430 |
| RseI | CAYNNNNRTG | 1 cut(s) | 490 |
| SapI | GCTCTTC | 1 cut(s) | 66 |
| SaqAI | TTAA | 1 cut(s) | 279 |
| SatI | GCNGC | 2 cut(s) | 426, 606 |
| Sau96I | GGNCC | 1 cut(s) | 81 |
| SchI | GAGTC | 1 cut(s) | 602 |
| ScrFI | CCNGG | 1 cut(s) | 152 |
| SfaNI | GCATC | 2 cut(s) | 145, 494 |
| SfcI | CTRYAG | 1 cut(s) | 426 |
| SinI | GGWCC | 1 cut(s) | 81 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 490 |
| Sse9I | AATT | 4 cut(s) | 23, 53, 336, 473 |
| SseBI | AGGCCT | 1 cut(s) | 678 |
| SspMI | CTAG | 4 cut(s) | 117, 243, 651, 674 |
| StuI | AGGCCT | 1 cut(s) | 678 |
| StyD4I | CCNGG | 1 cut(s) | 150 |
| StyI | CCWWGG | 2 cut(s) | 218, 673 |
| TaiI | ACGT | 1 cut(s) | 199 |
| TaqI | TCGA | 1 cut(s) | 214 |
| TasI | AATT | 4 cut(s) | 23, 53, 336, 473 |
| TfiI | GAWTC | 5 cut(s) | 37, 100, 287, 323, 458 |
| Tru1I | TTAA | 1 cut(s) | 279 |
| Tru9I | TTAA | 1 cut(s) | 279 |
| TseI | GCWGC | 2 cut(s) | 425, 605 |
| VpaK11BI | GGWCC | 1 cut(s) | 81 |
| XapI | RAATTY | 1 cut(s) | 53 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 225 |
| XmaJI | CCTAGG | 1 cut(s) | 673 |
| XspI | CTAG | 4 cut(s) | 117, 243, 651, 674 |