Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 29 - 91 | 1.1e-08 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 10 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 323 |
| AgsI | TTSAA | 1 cut(s) | 221 |
| AluBI | AGCT | 1 cut(s) | 308 |
| AluI | AGCT | 1 cut(s) | 308 |
| Alw26I | GTCTC | 1 cut(s) | 116 |
| ApeKI | GCWGC | 2 cut(s) | 46, 248 |
| AsuC2I | CCSGG | 1 cut(s) | 207 |
| AsuHPI | GGTGA | 2 cut(s) | 152, 181 |
| BbvI | GCAGC | 2 cut(s) | 58, 235 |
| BceAI | ACGGC | 1 cut(s) | 261 |
| BcnI | CCSGG | 1 cut(s) | 207 |
| BcoDI | GTCTC | 1 cut(s) | 116 |
| BisI | GCNGC | 2 cut(s) | 47, 249 |
| BlpI | GCTNAGC | 1 cut(s) | 264 |
| BlsI | GCNGC | 2 cut(s) | 48, 250 |
| Bme1390I | CCNGG | 1 cut(s) | 207 |
| BmiI | GGNNCC | 1 cut(s) | 211 |
| BmrFI | CCNGG | 1 cut(s) | 207 |
| BpmI | CTGGAG | 1 cut(s) | 300 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 264 |
| BpuMI | CCSGG | 1 cut(s) | 207 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 323 |
| Bse1I | ACTGG | 1 cut(s) | 302 |
| BseGI | GGATG | 1 cut(s) | 152 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 323 |
| BseMII | CTCAG | 1 cut(s) | 150 |
| BseNI | ACTGG | 1 cut(s) | 302 |
| BseXI | GCAGC | 2 cut(s) | 58, 235 |
| BsgI | GTGCAG | 1 cut(s) | 234 |
| BsiSI | CCGG | 1 cut(s) | 206 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 323 |
| BsmAI | GTCTC | 1 cut(s) | 116 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 264 |
| BspCNI | CTCAG | 1 cut(s) | 149 |
| BspLI | GGNNCC | 1 cut(s) | 211 |
| BsrI | ACTGG | 1 cut(s) | 302 |
| Bst4CI | ACNGT | 2 cut(s) | 110, 233 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 52 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 270 |
| BstDEI | CTNAG | 2 cut(s) | 136, 264 |
| BstF5I | GGATG | 1 cut(s) | 152 |
| BstMAI | GTCTC | 1 cut(s) | 116 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 43, 52, 269 |
| BstNSI | RCATGY | 1 cut(s) | 227 |
| BstSCI | CCNGG | 1 cut(s) | 205 |
| BstV1I | GCAGC | 2 cut(s) | 58, 235 |
| BtsCI | GGATG | 1 cut(s) | 152 |
| BtsIMutI | CAGTG | 1 cut(s) | 295 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 270 |
| Csp6I | GTAC | 1 cut(s) | 9 |
| CviAII | CATG | 3 cut(s) | 56, 224, 274 |
| CviJI | RGCY | 6 cut(s) | 188, 201, 248, 263, 272, 308 |
| CviKI_1 | RGCY | 6 cut(s) | 188, 201, 248, 263, 272, 308 |
| CviQI | GTAC | 1 cut(s) | 9 |
| DdeI | CTNAG | 2 cut(s) | 136, 264 |
| FaeI | CATG | 3 cut(s) | 59, 227, 277 |
| FaiI | YATR | 5 cut(s) | 57, 131, 225, 255, 275 |
| FatI | CATG | 3 cut(s) | 55, 223, 273 |
| Fnu4HI | GCNGC | 2 cut(s) | 47, 249 |
| FokI | GGATG | 1 cut(s) | 139 |
| Fsp4HI | GCNGC | 2 cut(s) | 47, 249 |
| GluI | GCNGC | 2 cut(s) | 47, 249 |
| GsuI | CTGGAG | 1 cut(s) | 300 |
| HapII | CCGG | 1 cut(s) | 206 |
| Hin1II | CATG | 3 cut(s) | 59, 227, 277 |
| HinfI | GANTC | 1 cut(s) | 236 |
| HpaII | CCGG | 1 cut(s) | 206 |
| HphI | GGTGA | 2 cut(s) | 152, 181 |
| Hpy166II | GTNNAC | 1 cut(s) | 9 |
| Hpy188III | TCNNGA | 1 cut(s) | 317 |
| Hpy8I | GTNNAC | 1 cut(s) | 9 |
| HpyAV | CCTTC | 2 cut(s) | 159, 223 |
| HpyCH4III | ACNGT | 2 cut(s) | 110, 233 |
| HpyCH4V | TGCA | 3 cut(s) | 37, 55, 251 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 43, 52, 269 |
| HpyF3I | CTNAG | 2 cut(s) | 136, 264 |
| Hsp92II | CATG | 3 cut(s) | 59, 227, 277 |
| LmnI | GCTCC | 1 cut(s) | 305 |
| LpnPI | CCDG | 9 cut(s) | 23, 102, 123, 170, 219, 267, 283, 287, 330 |
| Lsp1109I | GCAGC | 2 cut(s) | 58, 235 |
| MaeIII | GTNAC | 2 cut(s) | 104, 347 |
| MboII | GAAGA | 1 cut(s) | 158 |
| MluCI | AATT | 1 cut(s) | 124 |
| MnlI | CCTC | 2 cut(s) | 169, 324 |
| MseI | TTAA | 1 cut(s) | 78 |
| MspI | CCGG | 1 cut(s) | 206 |
| MspR9I | CCNGG | 1 cut(s) | 207 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 43, 52, 269 |
| NciI | CCSGG | 1 cut(s) | 207 |
| NlaIII | CATG | 3 cut(s) | 59, 227, 277 |
| NlaIV | GGNNCC | 1 cut(s) | 211 |
| NmuCI | GTSAC | 1 cut(s) | 104 |
| NspI | RCATGY | 1 cut(s) | 227 |
| PfeI | GAWTC | 1 cut(s) | 236 |
| PkrI | GCNGC | 2 cut(s) | 48, 250 |
| PspN4I | GGNNCC | 1 cut(s) | 211 |
| RsaI | GTAC | 1 cut(s) | 10 |
| RsaNI | GTAC | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| SatI | GCNGC | 2 cut(s) | 47, 249 |
| ScrFI | CCNGG | 1 cut(s) | 207 |
| SetI | ASST | 3 cut(s) | 142, 286, 310 |
| Sse9I | AATT | 1 cut(s) | 124 |
| StyD4I | CCNGG | 1 cut(s) | 205 |
| TaaI | ACNGT | 2 cut(s) | 110, 233 |
| TasI | AATT | 1 cut(s) | 124 |
| TatI | WGTACW | 1 cut(s) | 8 |
| TfiI | GAWTC | 1 cut(s) | 236 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TscAI | CASTG | 1 cut(s) | 302 |
| TseFI | GTSAC | 1 cut(s) | 104 |
| TseI | GCWGC | 2 cut(s) | 46, 248 |
| Tsp45I | GTSAC | 1 cut(s) | 104 |
| TspDTI | ATGAA | 2 cut(s) | 17, 159 |
| TspRI | CASTG | 1 cut(s) | 302 |
| XceI | RCATGY | 1 cut(s) | 227 |