Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 288 |
| AccB1I | GGYRCC | 1 cut(s) | 288 |
| AclWI | GGATC | 1 cut(s) | 115 |
| AdeI | CACNNNGTG | 1 cut(s) | 48 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AgsI | TTSAA | 2 cut(s) | 236, 260 |
| AjnI | CCWGG | 1 cut(s) | 52 |
| AluBI | AGCT | 2 cut(s) | 243, 248 |
| AluI | AGCT | 2 cut(s) | 243, 248 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| Alw44I | GTGCAC | 1 cut(s) | 57 |
| AlwI | GGATC | 1 cut(s) | 115 |
| AoxI | GGCC | 2 cut(s) | 37, 172 |
| ApaLI | GTGCAC | 1 cut(s) | 57 |
| AseI | ATTAAT | 1 cut(s) | 183 |
| Asp718I | GGTACC | 1 cut(s) | 288 |
| AspS9I | GGNCC | 1 cut(s) | 37 |
| AsuHPI | GGTGA | 2 cut(s) | 34, 101 |
| BaeGI | GKGCMC | 1 cut(s) | 61 |
| BanI | GGYRCC | 1 cut(s) | 288 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BceAI | ACGGC | 1 cut(s) | 208 |
| BciT130I | CCWGG | 1 cut(s) | 54 |
| BciVI | GTATCC | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 164 |
| BfuI | GTATCC | 1 cut(s) | 13 |
| BlpI | GCTNAGC | 1 cut(s) | 244 |
| Bme1390I | CCNGG | 1 cut(s) | 54 |
| BmgT120I | GGNCC | 1 cut(s) | 37 |
| BmiI | GGNNCC | 1 cut(s) | 290 |
| BmrFI | CCNGG | 1 cut(s) | 54 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 244 |
| BsaJI | CCNNGG | 1 cut(s) | 292 |
| Bse3DI | GCAATG | 1 cut(s) | 302 |
| BseBI | CCWGG | 1 cut(s) | 54 |
| BseDI | CCNNGG | 1 cut(s) | 292 |
| BseMI | GCAATG | 1 cut(s) | 302 |
| BseSI | GKGCMC | 1 cut(s) | 61 |
| BshFI | GGCC | 2 cut(s) | 39, 174 |
| BshNI | GGYRCC | 1 cut(s) | 288 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BsnI | GGCC | 2 cut(s) | 39, 174 |
| Bsp1286I | GDGCHC | 1 cut(s) | 61 |
| Bsp143I | GATC | 3 cut(s) | 3, 107, 160 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 244 |
| BspANI | GGCC | 2 cut(s) | 39, 174 |
| BspLI | GGNNCC | 1 cut(s) | 290 |
| BspPI | GGATC | 1 cut(s) | 115 |
| BspT107I | GGYRCC | 1 cut(s) | 288 |
| BsrDI | GCAATG | 1 cut(s) | 302 |
| BssECI | CCNNGG | 1 cut(s) | 292 |
| BssMI | GATC | 3 cut(s) | 3, 107, 160 |
| BssT1I | CCWWGG | 1 cut(s) | 292 |
| Bst2UI | CCWGG | 1 cut(s) | 54 |
| BstC8I | GCNNGC | 1 cut(s) | 176 |
| BstDEI | CTNAG | 1 cut(s) | 244 |
| BstKTI | GATC | 3 cut(s) | 6, 110, 163 |
| BstMBI | GATC | 3 cut(s) | 3, 107, 160 |
| BstNI | CCWGG | 1 cut(s) | 54 |
| BstNSI | RCATGY | 1 cut(s) | 272 |
| BstSCI | CCNGG | 1 cut(s) | 52 |
| BstSLI | GKGCMC | 1 cut(s) | 61 |
| BsuI | GTATCC | 1 cut(s) | 13 |
| BsuRI | GGCC | 2 cut(s) | 39, 174 |
| Cac8I | GCNNGC | 1 cut(s) | 176 |
| Cfr13I | GGNCC | 1 cut(s) | 37 |
| CseI | GACGC | 1 cut(s) | 156 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 32 |
| CviAII | CATG | 4 cut(s) | 46, 269, 281, 327 |
| CviJI | RGCY | 5 cut(s) | 14, 39, 174, 243, 248 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 39, 174, 243, 248 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 1 cut(s) | 244 |
| DpnI | GATC | 3 cut(s) | 5, 109, 162 |
| DpnII | GATC | 3 cut(s) | 3, 107, 160 |
| DraIII | CACNNNGTG | 1 cut(s) | 48 |
| Eco130I | CCWWGG | 1 cut(s) | 292 |
| EcoO109I | RGGNCCY | 1 cut(s) | 37 |
| EcoRII | CCWGG | 1 cut(s) | 52 |
| EcoT14I | CCWWGG | 1 cut(s) | 292 |
| ErhI | CCWWGG | 1 cut(s) | 292 |
| FaeI | CATG | 4 cut(s) | 49, 272, 284, 330 |
| FaiI | YATR | 9 cut(s) | 25, 47, 79, 159, 270, 282, 321, 323, 328 |
| FatI | CATG | 4 cut(s) | 45, 268, 280, 326 |
| FspBI | CTAG | 1 cut(s) | 164 |
| HaeIII | GGCC | 2 cut(s) | 39, 174 |
| HgaI | GACGC | 1 cut(s) | 156 |
| Hin1II | CATG | 4 cut(s) | 49, 272, 284, 330 |
| HinfI | GANTC | 1 cut(s) | 297 |
| HphI | GGTGA | 2 cut(s) | 34, 101 |
| Hpy166II | GTNNAC | 2 cut(s) | 59, 210 |
| Hpy188III | TCNNGA | 2 cut(s) | 140, 190 |
| Hpy8I | GTNNAC | 2 cut(s) | 59, 210 |
| HpyCH4V | TGCA | 1 cut(s) | 59 |
| HpyF3I | CTNAG | 1 cut(s) | 244 |
| Hsp92II | CATG | 4 cut(s) | 49, 272, 284, 330 |
| KpnI | GGTACC | 1 cut(s) | 292 |
| Kzo9I | GATC | 3 cut(s) | 3, 107, 160 |
| LpnPI | CCDG | 7 cut(s) | 39, 66, 72, 156, 188, 203, 271 |
| MaeI | CTAG | 1 cut(s) | 164 |
| MalI | GATC | 3 cut(s) | 5, 109, 162 |
| MboI | GATC | 3 cut(s) | 3, 107, 160 |
| MboII | GAAGA | 3 cut(s) | 131, 248, 287 |
| MhlI | GDGCHC | 1 cut(s) | 61 |
| MluCI | AATT | 2 cut(s) | 94, 184 |
| MlyI | GAGTC | 1 cut(s) | 291 |
| MmeI | TCCRAC | 1 cut(s) | 207 |
| MnlI | CCTC | 2 cut(s) | 50, 223 |
| MseI | TTAA | 5 cut(s) | 33, 132, 149, 183, 264 |
| MspR9I | CCNGG | 1 cut(s) | 54 |
| MvaI | CCWGG | 1 cut(s) | 54 |
| NdeII | GATC | 3 cut(s) | 3, 107, 160 |
| NlaIII | CATG | 4 cut(s) | 49, 272, 284, 330 |
| NlaIV | GGNNCC | 1 cut(s) | 290 |
| NspI | RCATGY | 1 cut(s) | 272 |
| PleI | GAGTC | 1 cut(s) | 291 |
| PpsI | GAGTC | 1 cut(s) | 291 |
| PshBI | ATTAAT | 1 cut(s) | 183 |
| Psp6I | CCWGG | 1 cut(s) | 52 |
| PspGI | CCWGG | 1 cut(s) | 52 |
| PspN4I | GGNNCC | 1 cut(s) | 290 |
| PspPI | GGNCC | 1 cut(s) | 37 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 5 cut(s) | 33, 132, 149, 183, 264 |
| Sau3AI | GATC | 3 cut(s) | 3, 107, 160 |
| Sau96I | GGNCC | 1 cut(s) | 37 |
| SchI | GAGTC | 1 cut(s) | 291 |
| ScrFI | CCNGG | 1 cut(s) | 54 |
| SduI | GDGCHC | 1 cut(s) | 61 |
| SetI | ASST | 6 cut(s) | 58, 234, 245, 250, 290, 294 |
| Sse9I | AATT | 2 cut(s) | 94, 184 |
| SspMI | CTAG | 1 cut(s) | 164 |
| StyD4I | CCNGG | 1 cut(s) | 52 |
| StyI | CCWWGG | 1 cut(s) | 292 |
| TasI | AATT | 2 cut(s) | 94, 184 |
| Tru1I | TTAA | 5 cut(s) | 33, 132, 149, 183, 264 |
| Tru9I | TTAA | 5 cut(s) | 33, 132, 149, 183, 264 |
| VneI | GTGCAC | 1 cut(s) | 57 |
| VspI | ATTAAT | 1 cut(s) | 183 |
| XceI | RCATGY | 1 cut(s) | 272 |
| XspI | CTAG | 1 cut(s) | 164 |