zinc-binding in reverse transcriptase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 648 |
| Acc36I | ACCTGC | 1 cut(s) | 367 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 275 |
| AciI | CCGC | 2 cut(s) | 187, 904 |
| AcoI | YGGCCR | 2 cut(s) | 474, 905 |
| AcsI | RAATTY | 3 cut(s) | 287, 779, 874 |
| AcyI | GRCGYC | 1 cut(s) | 1016 |
| AfaI | GTAC | 4 cut(s) | 118, 171, 245, 408 |
| AfeI | AGCGCT | 1 cut(s) | 921 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 135, 275, 773 |
| AgeI | ACCGGT | 1 cut(s) | 999 |
| AgsI | TTSAA | 1 cut(s) | 212 |
| AjnI | CCWGG | 1 cut(s) | 568 |
| AleI | CACNNNNGTG | 1 cut(s) | 1000 |
| AluBI | AGCT | 4 cut(s) | 64, 581, 883, 959 |
| AluI | AGCT | 4 cut(s) | 64, 581, 883, 959 |
| Alw21I | GWGCWC | 1 cut(s) | 283 |
| Alw26I | GTCTC | 3 cut(s) | 54, 780, 967 |
| Ama87I | CYCGRG | 1 cut(s) | 767 |
| Aor51HI | AGCGCT | 1 cut(s) | 921 |
| AoxI | GGCC | 4 cut(s) | 153, 474, 764, 905 |
| ApaI | GGGCCC | 1 cut(s) | 768 |
| ApeKI | GCWGC | 4 cut(s) | 626, 901, 917, 940 |
| ApoI | RAATTY | 3 cut(s) | 287, 779, 874 |
| AsiGI | ACCGGT | 1 cut(s) | 999 |
| AspLEI | GCGC | 1 cut(s) | 922 |
| AspS9I | GGNCC | 3 cut(s) | 764, 765, 1005 |
| AsuC2I | CCSGG | 5 cut(s) | 45, 401, 768, 769, 1020 |
| AsuHPI | GGTGA | 2 cut(s) | 212, 665 |
| AvaI | CYCGRG | 1 cut(s) | 767 |
| AvaII | GGWCC | 1 cut(s) | 1005 |
| BaeGI | GKGCMC | 2 cut(s) | 719, 768 |
| BalI | TGGCCA | 1 cut(s) | 476 |
| BanII | GRGCYC | 2 cut(s) | 520, 768 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 109, 141 |
| Bbv12I | GWGCWC | 1 cut(s) | 283 |
| BbvI | GCAGC | 4 cut(s) | 638, 913, 927, 929 |
| BccI | CCATC | 3 cut(s) | 18, 265, 490 |
| BciT130I | CCWGG | 1 cut(s) | 570 |
| BcnI | CCSGG | 5 cut(s) | 45, 401, 768, 769, 1020 |
| BcoDI | GTCTC | 3 cut(s) | 54, 780, 967 |
| BfaI | CTAG | 4 cut(s) | 71, 249, 606, 960 |
| BfmI | CTRYAG | 2 cut(s) | 360, 941 |
| BfoI | RGCGCY | 1 cut(s) | 923 |
| BfuAI | ACCTGC | 1 cut(s) | 367 |
| BisI | GCNGC | 5 cut(s) | 627, 902, 905, 918, 941 |
| BlpI | GCTNAGC | 2 cut(s) | 60, 726 |
| BlsI | GCNGC | 5 cut(s) | 628, 903, 906, 919, 942 |
| Bme1390I | CCNGG | 6 cut(s) | 45, 401, 570, 768, 769, 1020 |
| Bme18I | GGWCC | 1 cut(s) | 1005 |
| BmeT110I | CYCGRG | 1 cut(s) | 767 |
| BmgT120I | GGNCC | 3 cut(s) | 764, 765, 1005 |
| BmiI | GGNNCC | 2 cut(s) | 519, 766 |
| BmrFI | CCNGG | 6 cut(s) | 45, 401, 570, 768, 769, 1020 |
| BmsI | GCATC | 2 cut(s) | 242, 334 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 60, 726 |
| BpuMI | CCSGG | 5 cut(s) | 45, 401, 768, 769, 1020 |
| BsaBI | GATNNNNATC | 2 cut(s) | 212, 256 |
| BsaHI | GRCGYC | 1 cut(s) | 1016 |
| BsaI | GGTCTC | 1 cut(s) | 54 |
| BsaJI | CCNNGG | 7 cut(s) | 44, 477, 568, 767, 768, 819, 1019 |
| BsaWI | WCCGGW | 1 cut(s) | 999 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 549, 579 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 135, 275, 773 |
| Bse118I | RCCGGY | 1 cut(s) | 999 |
| Bse3DI | GCAATG | 1 cut(s) | 991 |
| Bse8I | GATNNNNATC | 2 cut(s) | 212, 256 |
| BseBI | CCWGG | 1 cut(s) | 570 |
| BseDI | CCNNGG | 7 cut(s) | 44, 477, 568, 767, 768, 819, 1019 |
| BseGI | GGATG | 3 cut(s) | 29, 257, 501 |
| BseJI | GATNNNNATC | 2 cut(s) | 212, 256 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 135, 275, 773 |
| BseMI | GCAATG | 1 cut(s) | 991 |
| BseMII | CTCAG | 7 cut(s) | 74, 288, 383, 725, 740, 893, 917 |
| BseRI | GAGGAG | 1 cut(s) | 255 |
| BseSI | GKGCMC | 2 cut(s) | 719, 768 |
| BseXI | GCAGC | 4 cut(s) | 638, 913, 927, 929 |
| BseYI | CCCAGC | 1 cut(s) | 324 |
| BshFI | GGCC | 4 cut(s) | 155, 476, 766, 907 |
| BshTI | ACCGGT | 1 cut(s) | 999 |
| BsiHKAI | GWGCWC | 1 cut(s) | 283 |
| BsiHKCI | CYCGRG | 1 cut(s) | 767 |
| BsiSI | CCGG | 5 cut(s) | 44, 400, 768, 1000, 1019 |
| BslFI | GGGAC | 1 cut(s) | 551 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 135, 275, 773 |
| BsmAI | GTCTC | 3 cut(s) | 54, 780, 967 |
| BsmFI | GGGAC | 1 cut(s) | 551 |
| BsnI | GGCC | 4 cut(s) | 155, 476, 766, 907 |
| Bso31I | GGTCTC | 1 cut(s) | 54 |
| BsoBI | CYCGRG | 1 cut(s) | 767 |
| Bsp120I | GGGCCC | 1 cut(s) | 764 |
| Bsp1286I | GDGCHC | 4 cut(s) | 283, 520, 719, 768 |
| Bsp143I | GATC | 1 cut(s) | 523 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 60, 726 |
| BspACI | CCGC | 2 cut(s) | 187, 904 |
| BspANI | GGCC | 4 cut(s) | 155, 476, 766, 907 |
| BspCNI | CTCAG | 7 cut(s) | 73, 289, 384, 724, 739, 892, 918 |
| BspLI | GGNNCC | 2 cut(s) | 519, 766 |
| BspMAI | CTGCAG | 2 cut(s) | 364, 945 |
| BspMI | ACCTGC | 1 cut(s) | 367 |
| BspTNI | GGTCTC | 1 cut(s) | 54 |
| BsrDI | GCAATG | 1 cut(s) | 991 |
| BsrFI | RCCGGY | 1 cut(s) | 999 |
| BssAI | RCCGGY | 1 cut(s) | 999 |
| BssECI | CCNNGG | 7 cut(s) | 44, 477, 568, 767, 768, 819, 1019 |
| BssMI | GATC | 1 cut(s) | 523 |
| BssNI | GRCGYC | 1 cut(s) | 1016 |
| BssT1I | CCWWGG | 2 cut(s) | 477, 819 |
| Bst2UI | CCWGG | 1 cut(s) | 570 |
| Bst4CI | ACNGT | 3 cut(s) | 92, 697, 828 |
| BstACI | GRCGYC | 1 cut(s) | 1016 |
| BstC8I | GCNNGC | 3 cut(s) | 105, 179, 938 |
| BstDEI | CTNAG | 8 cut(s) | 60, 297, 392, 711, 726, 834, 879, 926 |
| BstF5I | GGATG | 3 cut(s) | 29, 257, 501 |
| BstH2I | RGCGCY | 1 cut(s) | 923 |
| BstHHI | GCGC | 1 cut(s) | 922 |
| BstKTI | GATC | 1 cut(s) | 526 |
| BstMAI | GTCTC | 3 cut(s) | 54, 780, 967 |
| BstMBI | GATC | 1 cut(s) | 523 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 587, 672 |
| BstNI | CCWGG | 1 cut(s) | 570 |
| BstNSI | RCATGY | 1 cut(s) | 107 |
| BstSCI | CCNGG | 6 cut(s) | 43, 399, 568, 766, 767, 1018 |
| BstSFI | CTRYAG | 2 cut(s) | 360, 941 |
| BstSLI | GKGCMC | 2 cut(s) | 719, 768 |
| BstV1I | GCAGC | 4 cut(s) | 638, 913, 927, 929 |
| BsuRI | GGCC | 4 cut(s) | 155, 476, 766, 907 |
| BtsCI | GGATG | 3 cut(s) | 29, 257, 501 |
| BtsIMutI | CAGTG | 3 cut(s) | 97, 389, 719 |
| BveI | ACCTGC | 1 cut(s) | 367 |
| Cac8I | GCNNGC | 3 cut(s) | 105, 179, 938 |
| CfoI | GCGC | 1 cut(s) | 922 |
| Cfr10I | RCCGGY | 1 cut(s) | 999 |
| Cfr13I | GGNCC | 3 cut(s) | 764, 765, 1005 |
| Cfr9I | CCCGGG | 1 cut(s) | 767 |
| CseI | GACGC | 1 cut(s) | 1024 |
| Csp6I | GTAC | 4 cut(s) | 117, 170, 244, 407 |
| CspAI | ACCGGT | 1 cut(s) | 999 |
| CviAII | CATG | 4 cut(s) | 104, 440, 587, 686 |
| CviQI | GTAC | 4 cut(s) | 117, 170, 244, 407 |
| DdeI | CTNAG | 8 cut(s) | 60, 297, 392, 711, 726, 834, 879, 926 |
| DpnI | GATC | 1 cut(s) | 525 |
| DpnII | GATC | 1 cut(s) | 523 |
| EaeI | YGGCCR | 2 cut(s) | 474, 905 |
| Eco130I | CCWWGG | 2 cut(s) | 477, 819 |
| Eco24I | GRGCYC | 2 cut(s) | 520, 768 |
| Eco31I | GGTCTC | 1 cut(s) | 54 |
| Eco47I | GGWCC | 1 cut(s) | 1005 |
| Eco47III | AGCGCT | 1 cut(s) | 921 |
| Eco88I | CYCGRG | 1 cut(s) | 767 |
| EcoO109I | RGGNCCY | 1 cut(s) | 764 |
| EcoRI | GAATTC | 1 cut(s) | 874 |
| EcoRII | CCWGG | 1 cut(s) | 568 |
| EcoT14I | CCWWGG | 2 cut(s) | 477, 819 |
| EcoT38I | GRGCYC | 2 cut(s) | 520, 768 |
| ErhI | CCWWGG | 2 cut(s) | 477, 819 |
| FaeI | CATG | 4 cut(s) | 107, 443, 590, 689 |
| FaqI | GGGAC | 1 cut(s) | 551 |
| FatI | CATG | 4 cut(s) | 103, 439, 586, 685 |
| FauI | CCCGC | 1 cut(s) | 180 |
| FauNDI | CATATG | 1 cut(s) | 721 |
| Fnu4HI | GCNGC | 5 cut(s) | 627, 902, 905, 918, 941 |
| FokI | GGATG | 3 cut(s) | 36, 244, 508 |
| FriOI | GRGCYC | 2 cut(s) | 520, 768 |
| Fsp4HI | GCNGC | 5 cut(s) | 627, 902, 905, 918, 941 |
| FspBI | CTAG | 4 cut(s) | 71, 249, 606, 960 |
| GlaI | GCGC | 1 cut(s) | 921 |
| GluI | GCNGC | 5 cut(s) | 627, 902, 905, 918, 941 |
| GsaI | CCCAGC | 1 cut(s) | 328 |
| HaeII | RGCGCY | 1 cut(s) | 923 |
| HaeIII | GGCC | 4 cut(s) | 155, 476, 766, 907 |
| HapII | CCGG | 5 cut(s) | 44, 400, 768, 1000, 1019 |
| HgaI | GACGC | 1 cut(s) | 1024 |
| HhaI | GCGC | 1 cut(s) | 922 |
| Hin1I | GRCGYC | 1 cut(s) | 1016 |
| Hin1II | CATG | 4 cut(s) | 107, 443, 590, 689 |
| Hin6I | GCGC | 1 cut(s) | 920 |
| HinP1I | GCGC | 1 cut(s) | 920 |
| HinfI | GANTC | 4 cut(s) | 40, 232, 394, 868 |
| HpaII | CCGG | 5 cut(s) | 44, 400, 768, 1000, 1019 |
| HphI | GGTGA | 2 cut(s) | 212, 665 |
| Hpy166II | GTNNAC | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 2 cut(s) | 873, 954 |
| Hpy188III | TCNNGA | 5 cut(s) | 217, 236, 521, 785, 862 |
| Hpy8I | GTNNAC | 1 cut(s) | 203 |
| Hpy99I | CGWCG | 1 cut(s) | 1018 |
| HpyAV | CCTTC | 3 cut(s) | 135, 139, 634 |
| HpyCH4III | ACNGT | 3 cut(s) | 92, 697, 828 |
| HpyCH4V | TGCA | 4 cut(s) | 103, 362, 743, 943 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 587, 672 |
| HpyF3I | CTNAG | 8 cut(s) | 60, 297, 392, 711, 726, 834, 879, 926 |
| Hsp92I | GRCGYC | 1 cut(s) | 1016 |
| Hsp92II | CATG | 4 cut(s) | 107, 443, 590, 689 |
| HspAI | GCGC | 1 cut(s) | 920 |
| Kzo9I | GATC | 1 cut(s) | 523 |
| LmnI | GCTCC | 3 cut(s) | 286, 511, 523 |
| Lsp1109I | GCAGC | 4 cut(s) | 638, 913, 927, 929 |
| LweI | GCATC | 2 cut(s) | 242, 334 |
| MaeI | CTAG | 4 cut(s) | 71, 249, 606, 960 |
| MaeIII | GTNAC | 2 cut(s) | 612, 993 |
| MalI | GATC | 1 cut(s) | 525 |
| MboI | GATC | 1 cut(s) | 523 |
| MboII | GAAGA | 2 cut(s) | 701, 877 |
| MfeI | CAATTG | 1 cut(s) | 110 |
| MhlI | GDGCHC | 4 cut(s) | 283, 520, 719, 768 |
| MlsI | TGGCCA | 1 cut(s) | 476 |
| MluCI | AATT | 7 cut(s) | 54, 110, 287, 303, 375, 779, 874 |
| MluNI | TGGCCA | 1 cut(s) | 476 |
| MlyI | GAGTC | 1 cut(s) | 403 |
| MmeI | TCCRAC | 1 cut(s) | 754 |
| MnlI | CCTC | 6 cut(s) | 145, 271, 276, 546, 755, 907 |
| Mox20I | TGGCCA | 1 cut(s) | 476 |
| MscI | TGGCCA | 1 cut(s) | 476 |
| MseI | TTAA | 3 cut(s) | 302, 374, 561 |
| MslI | CAYNNNNRTG | 2 cut(s) | 438, 1000 |
| Msp20I | TGGCCA | 1 cut(s) | 476 |
| MspA1I | CMGCKG | 1 cut(s) | 904 |
| MspI | CCGG | 5 cut(s) | 44, 400, 768, 1000, 1019 |
| MspR9I | CCNGG | 6 cut(s) | 45, 401, 570, 768, 769, 1020 |
| MunI | CAATTG | 1 cut(s) | 110 |
| MvaI | CCWGG | 1 cut(s) | 570 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 587, 672 |
| NciI | CCSGG | 5 cut(s) | 45, 401, 768, 769, 1020 |
| NdeI | CATATG | 1 cut(s) | 721 |
| NdeII | GATC | 1 cut(s) | 523 |
| NlaIII | CATG | 4 cut(s) | 107, 443, 590, 689 |
| NlaIV | GGNNCC | 2 cut(s) | 519, 766 |
| NmuCI | GTSAC | 1 cut(s) | 993 |
| NspI | RCATGY | 1 cut(s) | 107 |
| OliI | CACNNNNGTG | 1 cut(s) | 1000 |
| PaeI | GCATGC | 1 cut(s) | 107 |
| PfeI | GAWTC | 3 cut(s) | 40, 232, 868 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 275 |
| PinAI | ACCGGT | 1 cut(s) | 999 |
| PkrI | GCNGC | 5 cut(s) | 628, 903, 906, 919, 942 |
| PleI | GAGTC | 1 cut(s) | 402 |
| PpsI | GAGTC | 1 cut(s) | 402 |
| PsiI | TTATAA | 1 cut(s) | 648 |
| Psp6I | CCWGG | 1 cut(s) | 568 |
| PspFI | CCCAGC | 1 cut(s) | 324 |
| PspGI | CCWGG | 1 cut(s) | 568 |
| PspN4I | GGNNCC | 2 cut(s) | 519, 766 |
| PspOMI | GGGCCC | 1 cut(s) | 764 |
| PspPI | GGNCC | 3 cut(s) | 764, 765, 1005 |
| PstI | CTGCAG | 2 cut(s) | 364, 945 |
| RsaI | GTAC | 4 cut(s) | 118, 171, 245, 408 |
| RsaNI | GTAC | 4 cut(s) | 117, 170, 244, 407 |
| RseI | CAYNNNNRTG | 2 cut(s) | 438, 1000 |
| SaqAI | TTAA | 3 cut(s) | 302, 374, 561 |
| SatI | GCNGC | 5 cut(s) | 627, 902, 905, 918, 941 |
| Sau3AI | GATC | 1 cut(s) | 523 |
| Sau96I | GGNCC | 3 cut(s) | 764, 765, 1005 |
| SchI | GAGTC | 1 cut(s) | 403 |
| ScrFI | CCNGG | 6 cut(s) | 45, 401, 570, 768, 769, 1020 |
| SduI | GDGCHC | 4 cut(s) | 283, 520, 719, 768 |
| SfaNI | GCATC | 2 cut(s) | 242, 334 |
| SfcI | CTRYAG | 2 cut(s) | 360, 941 |
| SgrAI | CRCCGGYG | 1 cut(s) | 999 |
| SinI | GGWCC | 1 cut(s) | 1005 |
| SmaI | CCCGGG | 1 cut(s) | 769 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 438, 1000 |
| SphI | GCATGC | 1 cut(s) | 107 |
| Sse9I | AATT | 7 cut(s) | 54, 110, 287, 303, 375, 779, 874 |
| SsiI | CCGC | 2 cut(s) | 187, 904 |
| SspMI | CTAG | 4 cut(s) | 71, 249, 606, 960 |
| StyD4I | CCNGG | 6 cut(s) | 43, 399, 568, 766, 767, 1018 |
| StyI | CCWWGG | 2 cut(s) | 477, 819 |
| TaaI | ACNGT | 3 cut(s) | 92, 697, 828 |
| TaqI | TCGA | 2 cut(s) | 784, 1013 |
| TasI | AATT | 7 cut(s) | 54, 110, 287, 303, 375, 779, 874 |
| TatI | WGTACW | 2 cut(s) | 169, 406 |
| TauI | GCSGC | 1 cut(s) | 907 |
| TfiI | GAWTC | 3 cut(s) | 40, 232, 868 |
| Tru1I | TTAA | 3 cut(s) | 302, 374, 561 |
| Tru9I | TTAA | 3 cut(s) | 302, 374, 561 |
| TscAI | CASTG | 3 cut(s) | 97, 396, 719 |
| TseFI | GTSAC | 1 cut(s) | 993 |
| TseI | GCWGC | 4 cut(s) | 626, 901, 917, 940 |
| Tsp45I | GTSAC | 1 cut(s) | 993 |
| TspDTI | ATGAA | 2 cut(s) | 422, 702 |
| TspMI | CCCGGG | 1 cut(s) | 767 |
| TspRI | CASTG | 3 cut(s) | 97, 396, 719 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 275 |
| VpaK11BI | GGWCC | 1 cut(s) | 1005 |
| XapI | RAATTY | 3 cut(s) | 287, 779, 874 |
| XceI | RCATGY | 1 cut(s) | 107 |
| XmaI | CCCGGG | 1 cut(s) | 767 |
| XspI | CTAG | 4 cut(s) | 71, 249, 606, 960 |