Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 31 - 71 | 4.9e-11 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 85 - 187 | 4e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 303 - 362 | 7.8e-06 | Leucine rich repeat |
| LRR_14 | PF23598 | 306 - 500 | 3.8e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 426 - 484 | 3e-08 | Leucine rich repeat |
| LRR_8 | PF13855 | 613 - 669 | 2.4e-08 | Leucine rich repeat |
| LRR_8 | PF13855 | 829 - 889 | 1.9e-08 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 474 |
| AarI | CACCTGC | 1 cut(s) | 2315 |
| Acc36I | ACCTGC | 1 cut(s) | 2315 |
| AccB1I | GGYRCC | 1 cut(s) | 2183 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1633, 2327 |
| AccI | GTMKAC | 1 cut(s) | 1171 |
| AccII | CGCG | 1 cut(s) | 439 |
| AciI | CCGC | 3 cut(s) | 66, 1204, 2454 |
| AcoI | YGGCCR | 2 cut(s) | 321, 2318 |
| AcuI | CTGAAG | 2 cut(s) | 1388, 2213 |
| AdeI | CACNNNGTG | 1 cut(s) | 1907 |
| AfaI | GTAC | 5 cut(s) | 178, 800, 1271, 1280, 2248 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 319, 1203, 1397, 1613, 1633, 1663, 2327, 2819, 2971 |
| AflIII | ACRYGT | 1 cut(s) | 2867 |
| AjnI | CCWGG | 4 cut(s) | 825, 1342, 2186, 2242 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 806, 838, 2967, 2999 |
| Alw26I | GTCTC | 5 cut(s) | 785, 1577, 2168, 2656, 3022 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 81 |
| Ama87I | CYCGRG | 1 cut(s) | 1708 |
| AoxI | GGCC | 8 cut(s) | 321, 592, 658, 1065, 1399, 2318, 2599, 2744 |
| ApeKI | GCWGC | 4 cut(s) | 210, 246, 1201, 1785 |
| AseI | ATTAAT | 1 cut(s) | 1098 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1420, 1457 |
| AspLEI | GCGC | 2 cut(s) | 439, 441 |
| AspS9I | GGNCC | 7 cut(s) | 592, 659, 731, 1501, 1765, 2156, 2744 |
| AsuC2I | CCSGG | 2 cut(s) | 415, 931 |
| AsuHPI | GGTGA | 6 cut(s) | 31, 1703, 1760, 2246, 2285, 2413 |
| AvaI | CYCGRG | 1 cut(s) | 1708 |
| AvaII | GGWCC | 4 cut(s) | 731, 1501, 1765, 2156 |
| BalI | TGGCCA | 1 cut(s) | 2320 |
| BamHI | GGATCC | 1 cut(s) | 2676 |
| BanI | GGYRCC | 1 cut(s) | 2183 |
| BanII | GRGCYC | 1 cut(s) | 2343 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1302, 1334, 1593, 1625 |
| BbsI | GAAGAC | 1 cut(s) | 2111 |
| BbvCI | CCTCAGC | 2 cut(s) | 576, 2967 |
| BbvI | GCAGC | 4 cut(s) | 222, 258, 1188, 1797 |
| BccI | CCATC | 6 cut(s) | 1627, 1635, 2269, 2381, 2545, 2907 |
| BciT130I | CCWGG | 4 cut(s) | 827, 1344, 2188, 2244 |
| BciVI | GTATCC | 1 cut(s) | 2755 |
| BclI | TGATCA | 2 cut(s) | 556, 2290 |
| BcnI | CCSGG | 2 cut(s) | 415, 931 |
| BcoDI | GTCTC | 5 cut(s) | 785, 1577, 2168, 2656, 3022 |
| BfaI | CTAG | 9 cut(s) | 839, 920, 987, 1485, 1568, 1598, 1728, 1985, 2030 |
| BfmI | CTRYAG | 1 cut(s) | 305 |
| BfuAI | ACCTGC | 1 cut(s) | 2315 |
| BfuI | GTATCC | 1 cut(s) | 2755 |
| BglII | AGATCT | 1 cut(s) | 994 |
| BisI | GCNGC | 4 cut(s) | 211, 247, 1202, 1786 |
| BlsI | GCNGC | 4 cut(s) | 212, 248, 1203, 1787 |
| Bme1390I | CCNGG | 6 cut(s) | 415, 827, 931, 1344, 2188, 2244 |
| Bme18I | GGWCC | 4 cut(s) | 731, 1501, 1765, 2156 |
| BmeT110I | CYCGRG | 1 cut(s) | 1708 |
| BmgT120I | GGNCC | 7 cut(s) | 592, 659, 731, 1501, 1765, 2156, 2744 |
| BmiI | GGNNCC | 8 cut(s) | 343, 593, 738, 880, 2158, 2185, 2678, 2745 |
| BmrFI | CCNGG | 6 cut(s) | 415, 827, 931, 1344, 2188, 2244 |
| BmrI | ACTGGG | 1 cut(s) | 598 |
| BmsI | GCATC | 1 cut(s) | 2074 |
| BmuI | ACTGGG | 1 cut(s) | 598 |
| BpiI | GAAGAC | 1 cut(s) | 2111 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 242, 274 |
| BpmI | CTGGAG | 1 cut(s) | 2841 |
| Bpu10I | CCTNAGC | 3 cut(s) | 576, 2306, 2967 |
| BpuEI | CTTGAG | 4 cut(s) | 796, 1151, 1399, 2788 |
| BpuMI | CCSGG | 2 cut(s) | 415, 931 |
| BsaI | GGTCTC | 2 cut(s) | 1577, 2168 |
| BsaJI | CCNNGG | 3 cut(s) | 1343, 1761, 2062 |
| BsaWI | WCCGGW | 2 cut(s) | 733, 886 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2349, 2379 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 319, 1203, 1397, 1613, 1633, 1663, 2327, 2819, 2971 |
| Bse1I | ACTGG | 4 cut(s) | 593, 1041, 1089, 2098 |
| Bse3DI | GCAATG | 2 cut(s) | 104, 2277 |
| BseBI | CCWGG | 4 cut(s) | 827, 1344, 2188, 2244 |
| BseDI | CCNNGG | 3 cut(s) | 1343, 1761, 2062 |
| BseGI | GGATG | 3 cut(s) | 60, 1073, 2540 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 319, 1203, 1397, 1613, 1633, 1663, 2327, 2819, 2971 |
| BseMI | GCAATG | 2 cut(s) | 104, 2277 |
| BseMII | CTCAG | 9 cut(s) | 486, 567, 614, 1904, 2163, 2474, 2585, 2705, 2981 |
| BseNI | ACTGG | 4 cut(s) | 593, 1041, 1089, 2098 |
| BsePI | GCGCGC | 1 cut(s) | 437 |
| BseRI | GAGGAG | 3 cut(s) | 334, 1936, 2739 |
| BseXI | GCAGC | 4 cut(s) | 222, 258, 1188, 1797 |
| BseYI | CCCAGC | 1 cut(s) | 93 |
| Bsh1236I | CGCG | 1 cut(s) | 439 |
| BshFI | GGCC | 8 cut(s) | 323, 594, 660, 1067, 1401, 2320, 2601, 2746 |
| BshNI | GGYRCC | 1 cut(s) | 2183 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1708 |
| BsiSI | CCGG | 5 cut(s) | 414, 734, 887, 930, 956 |
| BslFI | GGGAC | 3 cut(s) | 946, 1127, 1680 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 319, 1203, 1397, 1613, 1633, 1663, 2327, 2819, 2971 |
| BsmAI | GTCTC | 5 cut(s) | 785, 1577, 2168, 2656, 3022 |
| BsmBI | CGTCTC | 1 cut(s) | 3022 |
| BsmFI | GGGAC | 3 cut(s) | 946, 1127, 1680 |
| BsmI | GAATGC | 1 cut(s) | 1886 |
| BsnI | GGCC | 8 cut(s) | 323, 594, 660, 1067, 1401, 2320, 2601, 2746 |
| Bso31I | GGTCTC | 2 cut(s) | 1577, 2168 |
| BsoBI | CYCGRG | 1 cut(s) | 1708 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2343 |
| Bsp1407I | TGTACA | 1 cut(s) | 1278 |
| BspACI | CCGC | 3 cut(s) | 66, 1204, 2454 |
| BspANI | GGCC | 8 cut(s) | 323, 594, 660, 1067, 1401, 2320, 2601, 2746 |
| BspCNI | CTCAG | 9 cut(s) | 487, 568, 615, 1903, 2164, 2475, 2586, 2704, 2980 |
| BspFNI | CGCG | 1 cut(s) | 439 |
| BspHI | TCATGA | 1 cut(s) | 667 |
| BspLI | GGNNCC | 8 cut(s) | 343, 593, 738, 880, 2158, 2185, 2678, 2745 |
| BspMAI | CTGCAG | 1 cut(s) | 309 |
| BspMI | ACCTGC | 1 cut(s) | 2315 |
| BspT107I | GGYRCC | 1 cut(s) | 2183 |
| BspTNI | GGTCTC | 2 cut(s) | 1577, 2168 |
| BsrDI | GCAATG | 2 cut(s) | 104, 2277 |
| BsrGI | TGTACA | 1 cut(s) | 1278 |
| BsrI | ACTGG | 4 cut(s) | 593, 1041, 1089, 2098 |
| BssECI | CCNNGG | 3 cut(s) | 1343, 1761, 2062 |
| BssHII | GCGCGC | 1 cut(s) | 437 |
| BssNAI | GTATAC | 1 cut(s) | 1172 |
| BssT1I | CCWWGG | 1 cut(s) | 2062 |
| Bst1107I | GTATAC | 1 cut(s) | 1172 |
| Bst2UI | CCWGG | 4 cut(s) | 827, 1344, 2188, 2244 |
| Bst4CI | ACNGT | 7 cut(s) | 49, 83, 185, 1218, 2225, 2365, 2616 |
| Bst6I | CTCTTC | 2 cut(s) | 1270, 2443 |
| BstAUI | TGTACA | 1 cut(s) | 1278 |
| BstC8I | GCNNGC | 4 cut(s) | 372, 439, 2268, 2322 |
| BstDSI | CCRYGG | 1 cut(s) | 1761 |
| BstF5I | GGATG | 3 cut(s) | 60, 1073, 2540 |
| BstFNI | CGCG | 1 cut(s) | 439 |
| BstHHI | GCGC | 2 cut(s) | 439, 441 |
| BstMAI | GTCTC | 5 cut(s) | 785, 1577, 2168, 2656, 3022 |
| BstNI | CCWGG | 4 cut(s) | 827, 1344, 2188, 2244 |
| BstNSI | RCATGY | 2 cut(s) | 2871, 3005 |
| BstSCI | CCNGG | 6 cut(s) | 413, 825, 929, 1342, 2186, 2242 |
| BstSFI | CTRYAG | 1 cut(s) | 305 |
| BstUI | CGCG | 1 cut(s) | 439 |
| BstV1I | GCAGC | 4 cut(s) | 222, 258, 1188, 1797 |
| BstV2I | GAAGAC | 1 cut(s) | 2111 |
| BstX2I | RGATCY | 5 cut(s) | 581, 905, 994, 2395, 2676 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2473 |
| BstYI | RGATCY | 5 cut(s) | 581, 905, 994, 2395, 2676 |
| BstZ17I | GTATAC | 1 cut(s) | 1172 |
| BsuI | GTATCC | 1 cut(s) | 2755 |
| BsuRI | GGCC | 8 cut(s) | 323, 594, 660, 1067, 1401, 2320, 2601, 2746 |
| BtgI | CCRYGG | 1 cut(s) | 1761 |
| BtsCI | GGATG | 3 cut(s) | 60, 1073, 2540 |
| BtsIMutI | CAGTG | 5 cut(s) | 45, 586, 1034, 1693, 2854 |
| BveI | ACCTGC | 1 cut(s) | 2315 |
| Cac8I | GCNNGC | 4 cut(s) | 372, 439, 2268, 2322 |
| CaiI | CAGNNNCTG | 1 cut(s) | 81 |
| CciI | TCATGA | 1 cut(s) | 667 |
| CfoI | GCGC | 2 cut(s) | 439, 441 |
| Cfr13I | GGNCC | 7 cut(s) | 592, 659, 731, 1501, 1765, 2156, 2744 |
| CsiI | ACCWGGT | 1 cut(s) | 2242 |
| Csp6I | GTAC | 5 cut(s) | 177, 799, 1270, 1279, 2247 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1363, 1398, 1918, 1953 |
| CviAII | CATG | 8 cut(s) | 165, 261, 668, 1961, 2262, 2554, 2868, 3002 |
| CviQI | GTAC | 5 cut(s) | 177, 799, 1270, 1279, 2247 |
| DraI | TTTAAA | 1 cut(s) | 2944 |
| DraIII | CACNNNGTG | 1 cut(s) | 1907 |
| EaeI | YGGCCR | 2 cut(s) | 321, 2318 |
| Eam1104I | CTCTTC | 2 cut(s) | 1270, 2443 |
| EarI | CTCTTC | 2 cut(s) | 1270, 2443 |
| Eco130I | CCWWGG | 1 cut(s) | 2062 |
| Eco24I | GRGCYC | 1 cut(s) | 2343 |
| Eco31I | GGTCTC | 2 cut(s) | 1577, 2168 |
| Eco47I | GGWCC | 4 cut(s) | 731, 1501, 1765, 2156 |
| Eco57I | CTGAAG | 2 cut(s) | 1388, 2213 |
| Eco88I | CYCGRG | 1 cut(s) | 1708 |
| EcoO109I | RGGNCCY | 2 cut(s) | 659, 2744 |
| EcoRI | GAATTC | 2 cut(s) | 169, 2815 |
| EcoRII | CCWGG | 4 cut(s) | 825, 1342, 2186, 2242 |
| EcoT14I | CCWWGG | 1 cut(s) | 2062 |
| EcoT38I | GRGCYC | 1 cut(s) | 2343 |
| ErhI | CCWWGG | 1 cut(s) | 2062 |
| Esp3I | CGTCTC | 1 cut(s) | 3022 |
| FaeI | CATG | 8 cut(s) | 168, 264, 671, 1964, 2265, 2557, 2871, 3005 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2503, 2535 |
| FaqI | GGGAC | 3 cut(s) | 946, 1127, 1680 |
| FatI | CATG | 8 cut(s) | 164, 260, 667, 1960, 2261, 2553, 2867, 3001 |
| FauI | CCCGC | 1 cut(s) | 73 |
| FbaI | TGATCA | 2 cut(s) | 556, 2290 |
| FblI | GTMKAC | 1 cut(s) | 1171 |
| Fnu4HI | GCNGC | 4 cut(s) | 211, 247, 1202, 1786 |
| FokI | GGATG | 3 cut(s) | 47, 1060, 2527 |
| FriOI | GRGCYC | 1 cut(s) | 2343 |
| Fsp4HI | GCNGC | 4 cut(s) | 211, 247, 1202, 1786 |
| FspBI | CTAG | 9 cut(s) | 839, 920, 987, 1485, 1568, 1598, 1728, 1985, 2030 |
| GlaI | GCGC | 2 cut(s) | 438, 440 |
| GluI | GCNGC | 4 cut(s) | 211, 247, 1202, 1786 |
| GsaI | CCCAGC | 1 cut(s) | 97 |
| GsuI | CTGGAG | 1 cut(s) | 2841 |
| HaeIII | GGCC | 8 cut(s) | 323, 594, 660, 1067, 1401, 2320, 2601, 2746 |
| HapII | CCGG | 5 cut(s) | 414, 734, 887, 930, 956 |
| HhaI | GCGC | 2 cut(s) | 439, 441 |
| Hin1II | CATG | 8 cut(s) | 168, 264, 671, 1964, 2265, 2557, 2871, 3005 |
| Hin6I | GCGC | 2 cut(s) | 437, 439 |
| HinP1I | GCGC | 2 cut(s) | 437, 439 |
| HincII | GTYRAC | 2 cut(s) | 633, 850 |
| HindII | GTYRAC | 2 cut(s) | 633, 850 |
| HindIII | AAGCTT | 7 cut(s) | 155, 368, 683, 763, 1127, 2044, 2195 |
| HpaII | CCGG | 5 cut(s) | 414, 734, 887, 930, 956 |
| HphI | GGTGA | 6 cut(s) | 31, 1703, 1760, 2246, 2285, 2413 |
| Hpy166II | GTNNAC | 6 cut(s) | 73, 633, 850, 1172, 1768, 3007 |
| Hpy8I | GTNNAC | 6 cut(s) | 73, 633, 850, 1172, 1768, 3007 |
| Hpy99I | CGWCG | 1 cut(s) | 2891 |
| HpyAV | CCTTC | 5 cut(s) | 1304, 1412, 1504, 2667, 2728 |
| HpyCH4III | ACNGT | 7 cut(s) | 49, 83, 185, 1218, 2225, 2365, 2616 |
| HpyCH4IV | ACGT | 2 cut(s) | 701, 3031 |
| HpySE526I | ACGT | 2 cut(s) | 701, 3031 |
| Hsp92II | CATG | 8 cut(s) | 168, 264, 671, 1964, 2265, 2557, 2871, 3005 |
| HspAI | GCGC | 2 cut(s) | 437, 439 |
| Ksp22I | TGATCA | 2 cut(s) | 556, 2290 |
| LmnI | GCTCC | 6 cut(s) | 114, 347, 803, 1019, 1206, 1609 |
| Lsp1109I | GCAGC | 4 cut(s) | 222, 258, 1188, 1797 |
| LweI | GCATC | 1 cut(s) | 2074 |
| MabI | ACCWGGT | 1 cut(s) | 2242 |
| MaeI | CTAG | 9 cut(s) | 839, 920, 987, 1485, 1568, 1598, 1728, 1985, 2030 |
| MaeII | ACGT | 2 cut(s) | 701, 3031 |
| MaeIII | GTNAC | 9 cut(s) | 49, 202, 791, 1032, 1580, 2365, 2549, 2726, 2892 |
| MfeI | CAATTG | 4 cut(s) | 360, 1052, 1537, 2035 |
| MflI | RGATCY | 5 cut(s) | 581, 905, 994, 2395, 2676 |
| MhlI | GDGCHC | 1 cut(s) | 2343 |
| MlsI | TGGCCA | 1 cut(s) | 2320 |
| MluNI | TGGCCA | 1 cut(s) | 2320 |
| MlyI | GAGTC | 7 cut(s) | 260, 787, 851, 953, 1418, 1882, 2576 |
| MmeI | TCCRAC | 9 cut(s) | 316, 377, 1101, 1173, 1813, 2166, 2373, 2466, 2810 |
| Mox20I | TGGCCA | 1 cut(s) | 2320 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1420, 1457 |
| MscI | TGGCCA | 1 cut(s) | 2320 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1760, 2646 |
| Msp20I | TGGCCA | 1 cut(s) | 2320 |
| MspA1I | CMGCKG | 2 cut(s) | 575, 2971 |
| MspI | CCGG | 5 cut(s) | 414, 734, 887, 930, 956 |
| MspR9I | CCNGG | 6 cut(s) | 415, 827, 931, 1344, 2188, 2244 |
| MunI | CAATTG | 4 cut(s) | 360, 1052, 1537, 2035 |
| Mva1269I | GAATGC | 1 cut(s) | 1886 |
| MvaI | CCWGG | 4 cut(s) | 827, 1344, 2188, 2244 |
| MvnI | CGCG | 1 cut(s) | 439 |
| NciI | CCSGG | 2 cut(s) | 415, 931 |
| NlaIII | CATG | 8 cut(s) | 168, 264, 671, 1964, 2265, 2557, 2871, 3005 |
| NlaIV | GGNNCC | 8 cut(s) | 343, 593, 738, 880, 2158, 2185, 2678, 2745 |
| NmuCI | GTSAC | 2 cut(s) | 1032, 2892 |
| NspI | RCATGY | 2 cut(s) | 2871, 3005 |
| PaeR7I | CTCGAG | 1 cut(s) | 1708 |
| PagI | TCATGA | 1 cut(s) | 667 |
| PaqCI | CACCTGC | 1 cut(s) | 2315 |
| PauI | GCGCGC | 1 cut(s) | 437 |
| PciI | ACATGT | 1 cut(s) | 2867 |
| PctI | GAATGC | 1 cut(s) | 1886 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1420, 1457 |
| PflFI | GACNNNGTC | 1 cut(s) | 637 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1633, 2327 |
| PfoI | TCCNGGA | 2 cut(s) | 413, 929 |
| PkrI | GCNGC | 4 cut(s) | 212, 248, 1203, 1787 |
| PleI | GAGTC | 7 cut(s) | 259, 786, 850, 953, 1417, 1882, 2575 |
| PpsI | GAGTC | 7 cut(s) | 259, 786, 850, 953, 1417, 1882, 2575 |
| PscI | ACATGT | 1 cut(s) | 2867 |
| PshBI | ATTAAT | 1 cut(s) | 1098 |
| PsiI | TTATAA | 1 cut(s) | 474 |
| Psp6I | CCWGG | 4 cut(s) | 825, 1342, 2186, 2242 |
| PspFI | CCCAGC | 1 cut(s) | 93 |
| PspGI | CCWGG | 4 cut(s) | 825, 1342, 2186, 2242 |
| PspN4I | GGNNCC | 8 cut(s) | 343, 593, 738, 880, 2158, 2185, 2678, 2745 |
| PspPI | GGNCC | 7 cut(s) | 592, 659, 731, 1501, 1765, 2156, 2744 |
| PstI | CTGCAG | 1 cut(s) | 309 |
| PstNI | CAGNNNCTG | 1 cut(s) | 81 |
| PsuI | RGATCY | 5 cut(s) | 581, 905, 994, 2395, 2676 |
| PsyI | GACNNNGTC | 1 cut(s) | 637 |
| PteI | GCGCGC | 1 cut(s) | 437 |
| PvuII | CAGCTG | 2 cut(s) | 575, 2971 |
| RsaI | GTAC | 5 cut(s) | 178, 800, 1271, 1280, 2248 |
| RsaNI | GTAC | 5 cut(s) | 177, 799, 1270, 1279, 2247 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1760, 2646 |
| SatI | GCNGC | 4 cut(s) | 211, 247, 1202, 1786 |
| Sau96I | GGNCC | 7 cut(s) | 592, 659, 731, 1501, 1765, 2156, 2744 |
| SchI | GAGTC | 7 cut(s) | 260, 787, 851, 953, 1418, 1882, 2576 |
| ScrFI | CCNGG | 6 cut(s) | 415, 827, 931, 1344, 2188, 2244 |
| SduI | GDGCHC | 1 cut(s) | 2343 |
| SexAI | ACCWGGT | 1 cut(s) | 2242 |
| SfaNI | GCATC | 1 cut(s) | 2074 |
| SfcI | CTRYAG | 1 cut(s) | 305 |
| Sfr274I | CTCGAG | 1 cut(s) | 1708 |
| SinI | GGWCC | 4 cut(s) | 731, 1501, 1765, 2156 |
| SlaI | CTCGAG | 1 cut(s) | 1708 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1760, 2646 |
| SmlI | CTYRAG | 5 cut(s) | 775, 1130, 1378, 1708, 2803 |
| SmoI | CTYRAG | 5 cut(s) | 775, 1130, 1378, 1708, 2803 |
| SsiI | CCGC | 3 cut(s) | 66, 1204, 2454 |
| SspI | AATATT | 1 cut(s) | 708 |
| SspMI | CTAG | 9 cut(s) | 839, 920, 987, 1485, 1568, 1598, 1728, 1985, 2030 |
| StyD4I | CCNGG | 6 cut(s) | 413, 825, 929, 1342, 2186, 2242 |
| StyI | CCWWGG | 1 cut(s) | 2062 |
| TaaI | ACNGT | 7 cut(s) | 49, 83, 185, 1218, 2225, 2365, 2616 |
| TaiI | ACGT | 2 cut(s) | 704, 3034 |
| TaqI | TCGA | 7 cut(s) | 173, 912, 1094, 1140, 1412, 1709, 2721 |
| TatI | WGTACW | 1 cut(s) | 1278 |
| TscAI | CASTG | 5 cut(s) | 52, 593, 1041, 1693, 2854 |
| TseFI | GTSAC | 2 cut(s) | 1032, 2892 |
| TseI | GCWGC | 4 cut(s) | 210, 246, 1201, 1785 |
| Tsp45I | GTSAC | 2 cut(s) | 1032, 2892 |
| TspDTI | ATGAA | 8 cut(s) | 656, 684, 1413, 1744, 1977, 2298, 2484, 2811 |
| TspGWI | ACGGA | 5 cut(s) | 557, 816, 1318, 1750, 2370 |
| TspRI | CASTG | 5 cut(s) | 52, 593, 1041, 1693, 2854 |
| Tth111I | GACNNNGTC | 1 cut(s) | 637 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1633, 2327 |
| VpaK11BI | GGWCC | 4 cut(s) | 731, 1501, 1765, 2156 |
| VspI | ATTAAT | 1 cut(s) | 1098 |
| XbaI | TCTAGA | 2 cut(s) | 986, 1597 |
| XceI | RCATGY | 2 cut(s) | 2871, 3005 |
| XhoI | CTCGAG | 1 cut(s) | 1708 |
| XmiI | GTMKAC | 1 cut(s) | 1171 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1420, 1457 |
| XspI | CTAG | 9 cut(s) | 839, 920, 987, 1485, 1568, 1598, 1728, 1985, 2030 |