ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Lipase_GDSL | PF00657 | 36 - 282 | 2.2e-23 | GDSL-like Lipase/Acylhydrolase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 260 |
| AarI | CACCTGC | 1 cut(s) | 19 |
| Acc36I | ACCTGC | 1 cut(s) | 19 |
| AccI | GTMKAC | 3 cut(s) | 276, 564, 876 |
| AccII | CGCG | 1 cut(s) | 179 |
| AciI | CCGC | 2 cut(s) | 179, 734 |
| AclWI | GGATC | 1 cut(s) | 683 |
| AcsI | RAATTY | 3 cut(s) | 186, 401, 650 |
| AcuI | CTGAAG | 2 cut(s) | 444, 843 |
| AfaI | GTAC | 2 cut(s) | 464, 794 |
| AflIII | ACRYGT | 1 cut(s) | 795 |
| AgsI | TTSAA | 3 cut(s) | 574, 674, 832 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 473, 505, 514, 546 |
| AluBI | AGCT | 7 cut(s) | 89, 297, 625, 669, 698, 913, 941 |
| AluI | AGCT | 7 cut(s) | 89, 297, 625, 669, 698, 913, 941 |
| AlwI | GGATC | 1 cut(s) | 683 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 701 |
| AoxI | GGCC | 1 cut(s) | 55 |
| ApeKI | GCWGC | 6 cut(s) | 86, 345, 513, 581, 695, 698 |
| ApoI | RAATTY | 3 cut(s) | 186, 401, 650 |
| AseI | ATTAAT | 1 cut(s) | 921 |
| AspLEI | GCGC | 2 cut(s) | 179, 586 |
| AspS9I | GGNCC | 1 cut(s) | 55 |
| AsuC2I | CCSGG | 1 cut(s) | 872 |
| AsuHPI | GGTGA | 1 cut(s) | 893 |
| AsuII | TTCGAA | 2 cut(s) | 190, 716 |
| BbvI | GCAGC | 6 cut(s) | 98, 357, 500, 593, 685, 707 |
| BccI | CCATC | 2 cut(s) | 41, 822 |
| BcnI | CCSGG | 1 cut(s) | 872 |
| BfaI | CTAG | 1 cut(s) | 946 |
| BfmI | CTRYAG | 1 cut(s) | 693 |
| BfuAI | ACCTGC | 1 cut(s) | 19 |
| BisI | GCNGC | 7 cut(s) | 87, 180, 346, 514, 582, 696, 699 |
| BlpI | GCTNAGC | 1 cut(s) | 298 |
| BlsI | GCNGC | 7 cut(s) | 88, 181, 347, 515, 583, 697, 700 |
| Bme1390I | CCNGG | 1 cut(s) | 872 |
| BmgT120I | GGNCC | 1 cut(s) | 55 |
| BmrFI | CCNGG | 1 cut(s) | 872 |
| BmsI | GCATC | 1 cut(s) | 634 |
| BpmI | CTGGAG | 2 cut(s) | 705, 921 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 298 |
| Bpu14I | TTCGAA | 2 cut(s) | 190, 716 |
| BpuMI | CCSGG | 1 cut(s) | 872 |
| BsaAI | YACGTR | 1 cut(s) | 796 |
| BsaBI | GATNNNNATC | 1 cut(s) | 260 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 15, 45 |
| Bse118I | RCCGGY | 1 cut(s) | 57 |
| Bse1I | ACTGG | 1 cut(s) | 205 |
| Bse3DI | GCAATG | 2 cut(s) | 355, 576 |
| Bse8I | GATNNNNATC | 1 cut(s) | 260 |
| BseGI | GGATG | 1 cut(s) | 814 |
| BseJI | GATNNNNATC | 1 cut(s) | 260 |
| BseMI | GCAATG | 2 cut(s) | 355, 576 |
| BseMII | CTCAG | 3 cut(s) | 392, 402, 780 |
| BseNI | ACTGG | 1 cut(s) | 205 |
| BseXI | GCAGC | 6 cut(s) | 98, 357, 500, 593, 685, 707 |
| BseYI | CCCAGC | 1 cut(s) | 928 |
| BsgI | GTGCAG | 4 cut(s) | 47, 82, 105, 499 |
| Bsh1236I | CGCG | 1 cut(s) | 179 |
| BshFI | GGCC | 1 cut(s) | 57 |
| BsiSI | CCGG | 2 cut(s) | 58, 872 |
| BslFI | GGGAC | 2 cut(s) | 516, 818 |
| BsmFI | GGGAC | 2 cut(s) | 516, 818 |
| BsnI | GGCC | 1 cut(s) | 57 |
| Bsp119I | TTCGAA | 2 cut(s) | 190, 716 |
| Bsp1407I | TGTACA | 1 cut(s) | 462 |
| Bsp143I | GATC | 2 cut(s) | 688, 851 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 298 |
| BspACI | CCGC | 2 cut(s) | 179, 734 |
| BspANI | GGCC | 1 cut(s) | 57 |
| BspCNI | CTCAG | 3 cut(s) | 391, 403, 781 |
| BspFNI | CGCG | 1 cut(s) | 179 |
| BspMAI | CTGCAG | 1 cut(s) | 697 |
| BspMI | ACCTGC | 1 cut(s) | 19 |
| BspPI | GGATC | 1 cut(s) | 683 |
| BspQI | GCTCTTC | 1 cut(s) | 287 |
| BspT104I | TTCGAA | 2 cut(s) | 190, 716 |
| BsrDI | GCAATG | 2 cut(s) | 355, 576 |
| BsrFI | RCCGGY | 1 cut(s) | 57 |
| BsrGI | TGTACA | 1 cut(s) | 462 |
| BsrI | ACTGG | 1 cut(s) | 205 |
| BssAI | RCCGGY | 1 cut(s) | 57 |
| BssMI | GATC | 2 cut(s) | 688, 851 |
| Bst4CI | ACNGT | 4 cut(s) | 240, 459, 591, 712 |
| Bst6I | CTCTTC | 1 cut(s) | 287 |
| BstAUI | TGTACA | 1 cut(s) | 462 |
| BstBAI | YACGTR | 1 cut(s) | 796 |
| BstBI | TTCGAA | 2 cut(s) | 190, 716 |
| BstC8I | GCNNGC | 2 cut(s) | 206, 703 |
| BstDEI | CTNAG | 4 cut(s) | 298, 378, 411, 789 |
| BstF5I | GGATG | 1 cut(s) | 814 |
| BstFNI | CGCG | 1 cut(s) | 179 |
| BstHHI | GCGC | 2 cut(s) | 179, 586 |
| BstKTI | GATC | 2 cut(s) | 691, 854 |
| BstMBI | GATC | 2 cut(s) | 688, 851 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 176, 938 |
| BstNSI | RCATGY | 1 cut(s) | 561 |
| BstSCI | CCNGG | 1 cut(s) | 870 |
| BstSFI | CTRYAG | 1 cut(s) | 693 |
| BstUI | CGCG | 1 cut(s) | 179 |
| BstV1I | GCAGC | 6 cut(s) | 98, 357, 500, 593, 685, 707 |
| BstX2I | RGATCY | 1 cut(s) | 688 |
| BstYI | RGATCY | 1 cut(s) | 688 |
| BsuRI | GGCC | 1 cut(s) | 57 |
| BtsCI | GGATG | 1 cut(s) | 814 |
| BtsI | GCAGTG | 1 cut(s) | 840 |
| BtsIMutI | CAGTG | 2 cut(s) | 408, 840 |
| BveI | ACCTGC | 1 cut(s) | 19 |
| Cac8I | GCNNGC | 2 cut(s) | 206, 703 |
| CaiI | CAGNNNCTG | 1 cut(s) | 701 |
| CfoI | GCGC | 2 cut(s) | 179, 586 |
| Cfr10I | RCCGGY | 1 cut(s) | 57 |
| Cfr13I | GGNCC | 1 cut(s) | 55 |
| Csp6I | GTAC | 2 cut(s) | 463, 793 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 465, 500 |
| CviAII | CATG | 3 cut(s) | 229, 558, 774 |
| CviQI | GTAC | 2 cut(s) | 463, 793 |
| DdeI | CTNAG | 4 cut(s) | 298, 378, 411, 789 |
| DpnI | GATC | 2 cut(s) | 690, 853 |
| DpnII | GATC | 2 cut(s) | 688, 851 |
| Eam1104I | CTCTTC | 1 cut(s) | 287 |
| EarI | CTCTTC | 1 cut(s) | 287 |
| Eco57I | CTGAAG | 2 cut(s) | 444, 843 |
| EcoRI | GAATTC | 1 cut(s) | 186 |
| FaeI | CATG | 3 cut(s) | 232, 561, 777 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 281, 313 |
| FaqI | GGGAC | 2 cut(s) | 516, 818 |
| FatI | CATG | 3 cut(s) | 228, 557, 773 |
| FblI | GTMKAC | 3 cut(s) | 276, 564, 876 |
| Fnu4HI | GCNGC | 7 cut(s) | 87, 180, 346, 514, 582, 696, 699 |
| FokI | GGATG | 1 cut(s) | 801 |
| Fsp4HI | GCNGC | 7 cut(s) | 87, 180, 346, 514, 582, 696, 699 |
| FspBI | CTAG | 1 cut(s) | 946 |
| GlaI | GCGC | 2 cut(s) | 178, 585 |
| GluI | GCNGC | 7 cut(s) | 87, 180, 346, 514, 582, 696, 699 |
| GsaI | CCCAGC | 1 cut(s) | 932 |
| GsuI | CTGGAG | 2 cut(s) | 705, 921 |
| HaeIII | GGCC | 1 cut(s) | 57 |
| HapII | CCGG | 2 cut(s) | 58, 872 |
| HhaI | GCGC | 2 cut(s) | 179, 586 |
| Hin1II | CATG | 3 cut(s) | 232, 561, 777 |
| Hin6I | GCGC | 2 cut(s) | 177, 584 |
| HinP1I | GCGC | 2 cut(s) | 177, 584 |
| HincII | GTYRAC | 2 cut(s) | 277, 763 |
| HindII | GTYRAC | 2 cut(s) | 277, 763 |
| HinfI | GANTC | 3 cut(s) | 222, 810, 837 |
| HpaII | CCGG | 2 cut(s) | 58, 872 |
| HphI | GGTGA | 1 cut(s) | 893 |
| Hpy166II | GTNNAC | 6 cut(s) | 163, 277, 565, 619, 763, 877 |
| Hpy188I | TCNGA | 3 cut(s) | 23, 145, 851 |
| Hpy188III | TCNNGA | 1 cut(s) | 684 |
| Hpy8I | GTNNAC | 6 cut(s) | 163, 277, 565, 619, 763, 877 |
| HpyAV | CCTTC | 1 cut(s) | 475 |
| HpyCH4III | ACNGT | 4 cut(s) | 240, 459, 591, 712 |
| HpyCH4IV | ACGT | 1 cut(s) | 795 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 176, 938 |
| HpyF3I | CTNAG | 4 cut(s) | 298, 378, 411, 789 |
| HpySE526I | ACGT | 1 cut(s) | 795 |
| Hsp92II | CATG | 3 cut(s) | 232, 561, 777 |
| HspAI | GCGC | 2 cut(s) | 177, 584 |
| Kzo9I | GATC | 2 cut(s) | 688, 851 |
| LguI | GCTCTTC | 1 cut(s) | 287 |
| LmnI | GCTCC | 1 cut(s) | 473 |
| Lsp1109I | GCAGC | 6 cut(s) | 98, 357, 500, 593, 685, 707 |
| LweI | GCATC | 1 cut(s) | 634 |
| MaeI | CTAG | 1 cut(s) | 946 |
| MaeII | ACGT | 1 cut(s) | 795 |
| MaeIII | GTNAC | 1 cut(s) | 899 |
| MalI | GATC | 2 cut(s) | 690, 853 |
| MboI | GATC | 2 cut(s) | 688, 851 |
| MboII | GAAGA | 4 cut(s) | 16, 301, 304, 525 |
| MfeI | CAATTG | 1 cut(s) | 209 |
| MflI | RGATCY | 1 cut(s) | 688 |
| MluCI | AATT | 9 cut(s) | 35, 186, 209, 364, 401, 528, 634, 650, 918 |
| MmeI | TCCRAC | 2 cut(s) | 316, 475 |
| MnlI | CCTC | 2 cut(s) | 46, 387 |
| MseI | TTAA | 8 cut(s) | 135, 153, 242, 314, 594, 663, 867, 921 |
| MspA1I | CMGCKG | 2 cut(s) | 89, 698 |
| MspI | CCGG | 2 cut(s) | 58, 872 |
| MspR9I | CCNGG | 1 cut(s) | 872 |
| MunI | CAATTG | 1 cut(s) | 209 |
| MvnI | CGCG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 176, 938 |
| NciI | CCSGG | 1 cut(s) | 872 |
| NdeII | GATC | 2 cut(s) | 688, 851 |
| NlaIII | CATG | 3 cut(s) | 232, 561, 777 |
| NmuCI | GTSAC | 1 cut(s) | 899 |
| NspI | RCATGY | 1 cut(s) | 561 |
| NspV | TTCGAA | 2 cut(s) | 190, 716 |
| PaqCI | CACCTGC | 1 cut(s) | 19 |
| PciSI | GCTCTTC | 1 cut(s) | 287 |
| PfeI | GAWTC | 3 cut(s) | 222, 810, 837 |
| PkrI | GCNGC | 7 cut(s) | 88, 181, 347, 515, 583, 697, 700 |
| Ppu21I | YACGTR | 1 cut(s) | 796 |
| PshBI | ATTAAT | 1 cut(s) | 921 |
| PsiI | TTATAA | 1 cut(s) | 260 |
| PspFI | CCCAGC | 1 cut(s) | 928 |
| PspPI | GGNCC | 1 cut(s) | 55 |
| PstI | CTGCAG | 1 cut(s) | 697 |
| PstNI | CAGNNNCTG | 1 cut(s) | 701 |
| PsuI | RGATCY | 1 cut(s) | 688 |
| PvuII | CAGCTG | 2 cut(s) | 89, 698 |
| RsaI | GTAC | 2 cut(s) | 464, 794 |
| RsaNI | GTAC | 2 cut(s) | 463, 793 |
| SalI | GTCGAC | 1 cut(s) | 275 |
| SapI | GCTCTTC | 1 cut(s) | 287 |
| SaqAI | TTAA | 8 cut(s) | 135, 153, 242, 314, 594, 663, 867, 921 |
| SatI | GCNGC | 7 cut(s) | 87, 180, 346, 514, 582, 696, 699 |
| Sau3AI | GATC | 2 cut(s) | 688, 851 |
| Sau96I | GGNCC | 1 cut(s) | 55 |
| ScrFI | CCNGG | 1 cut(s) | 872 |
| SfaNI | GCATC | 1 cut(s) | 634 |
| SfcI | CTRYAG | 1 cut(s) | 693 |
| SfuI | TTCGAA | 2 cut(s) | 190, 716 |
| Sse9I | AATT | 9 cut(s) | 35, 186, 209, 364, 401, 528, 634, 650, 918 |
| SsiI | CCGC | 2 cut(s) | 179, 734 |
| SspI | AATATT | 1 cut(s) | 443 |
| SspMI | CTAG | 1 cut(s) | 946 |
| StyD4I | CCNGG | 1 cut(s) | 870 |
| TaaI | ACNGT | 4 cut(s) | 240, 459, 591, 712 |
| TaiI | ACGT | 1 cut(s) | 798 |
| TaqI | TCGA | 4 cut(s) | 45, 190, 276, 716 |
| TasI | AATT | 9 cut(s) | 35, 186, 209, 364, 401, 528, 634, 650, 918 |
| TatI | WGTACW | 1 cut(s) | 462 |
| TauI | GCSGC | 1 cut(s) | 182 |
| TfiI | GAWTC | 3 cut(s) | 222, 810, 837 |
| Tru1I | TTAA | 8 cut(s) | 135, 153, 242, 314, 594, 663, 867, 921 |
| Tru9I | TTAA | 8 cut(s) | 135, 153, 242, 314, 594, 663, 867, 921 |
| TscAI | CASTG | 2 cut(s) | 415, 847 |
| TseFI | GTSAC | 1 cut(s) | 899 |
| TseI | GCWGC | 6 cut(s) | 86, 345, 513, 581, 695, 698 |
| Tsp45I | GTSAC | 1 cut(s) | 899 |
| TspDTI | ATGAA | 3 cut(s) | 17, 643, 756 |
| TspGWI | ACGGA | 1 cut(s) | 822 |
| TspRI | CASTG | 2 cut(s) | 415, 847 |
| VspI | ATTAAT | 1 cut(s) | 921 |
| XapI | RAATTY | 3 cut(s) | 186, 401, 650 |
| XceI | RCATGY | 1 cut(s) | 561 |
| XmiI | GTMKAC | 3 cut(s) | 276, 564, 876 |
| XspI | CTAG | 1 cut(s) | 946 |