Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 113, 540 |
| AcsI | RAATTY | 1 cut(s) | 387 |
| AcyI | GRCGYC | 1 cut(s) | 239 |
| AfaI | GTAC | 4 cut(s) | 10, 30, 182, 372 |
| AflIII | ACRYGT | 2 cut(s) | 31, 407 |
| AgsI | TTSAA | 1 cut(s) | 346 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 489 |
| AluBI | AGCT | 2 cut(s) | 279, 302 |
| AluI | AGCT | 2 cut(s) | 279, 302 |
| AoxI | GGCC | 2 cut(s) | 435, 537 |
| ApeKI | GCWGC | 2 cut(s) | 420, 524 |
| ApoI | RAATTY | 1 cut(s) | 387 |
| AspLEI | GCGC | 1 cut(s) | 339 |
| BanII | GRGCYC | 1 cut(s) | 355 |
| BauI | CACGAG | 1 cut(s) | 361 |
| BbsI | GAAGAC | 2 cut(s) | 150, 319 |
| BbvI | GCAGC | 2 cut(s) | 407, 511 |
| BccI | CCATC | 2 cut(s) | 88, 161 |
| BfaI | CTAG | 2 cut(s) | 249, 574 |
| BfoI | RGCGCY | 1 cut(s) | 340 |
| BisI | GCNGC | 4 cut(s) | 114, 421, 525, 540 |
| BlsI | GCNGC | 4 cut(s) | 115, 422, 526, 541 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 489 |
| BmiI | GGNNCC | 1 cut(s) | 352 |
| BmrI | ACTGGG | 1 cut(s) | 292 |
| BmuI | ACTGGG | 1 cut(s) | 292 |
| BpiI | GAAGAC | 2 cut(s) | 150, 319 |
| BpuEI | CTTGAG | 2 cut(s) | 145, 241 |
| BsaAI | YACGTR | 1 cut(s) | 383 |
| BsaHI | GRCGYC | 1 cut(s) | 239 |
| Bse1I | ACTGG | 1 cut(s) | 287 |
| BseNI | ACTGG | 1 cut(s) | 287 |
| BseXI | GCAGC | 2 cut(s) | 407, 511 |
| BshFI | GGCC | 2 cut(s) | 437, 539 |
| BslFI | GGGAC | 1 cut(s) | 299 |
| BsmFI | GGGAC | 1 cut(s) | 299 |
| BsnI | GGCC | 2 cut(s) | 437, 539 |
| Bsp1286I | GDGCHC | 1 cut(s) | 355 |
| Bsp1407I | TGTACA | 2 cut(s) | 28, 180 |
| BspACI | CCGC | 2 cut(s) | 113, 540 |
| BspANI | GGCC | 2 cut(s) | 437, 539 |
| BspLI | GGNNCC | 1 cut(s) | 352 |
| BsrGI | TGTACA | 2 cut(s) | 28, 180 |
| BsrI | ACTGG | 1 cut(s) | 287 |
| BssNI | GRCGYC | 1 cut(s) | 239 |
| BssSI | CACGAG | 1 cut(s) | 361 |
| Bst2BI | CACGAG | 1 cut(s) | 361 |
| BstACI | GRCGYC | 1 cut(s) | 239 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 548, 562 |
| BstAUI | TGTACA | 2 cut(s) | 28, 180 |
| BstBAI | YACGTR | 1 cut(s) | 383 |
| BstC8I | GCNNGC | 2 cut(s) | 300, 567 |
| BstDEI | CTNAG | 3 cut(s) | 74, 105, 510 |
| BstH2I | RGCGCY | 1 cut(s) | 340 |
| BstHHI | GCGC | 1 cut(s) | 339 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 548, 562 |
| BstNSI | RCATGY | 3 cut(s) | 35, 411, 569 |
| BstV1I | GCAGC | 2 cut(s) | 407, 511 |
| BstV2I | GAAGAC | 2 cut(s) | 150, 319 |
| BsuRI | GGCC | 2 cut(s) | 437, 539 |
| Cac8I | GCNNGC | 2 cut(s) | 300, 567 |
| CfoI | GCGC | 1 cut(s) | 339 |
| CseI | GACGC | 1 cut(s) | 228 |
| Csp6I | GTAC | 4 cut(s) | 9, 29, 181, 371 |
| CviAII | CATG | 9 cut(s) | 32, 203, 234, 333, 398, 408, 463, 518, 566 |
| CviJI | RGCY | 7 cut(s) | 116, 279, 302, 353, 437, 508, 539 |
| CviKI_1 | RGCY | 7 cut(s) | 116, 279, 302, 353, 437, 508, 539 |
| CviQI | GTAC | 4 cut(s) | 9, 29, 181, 371 |
| DdeI | CTNAG | 3 cut(s) | 74, 105, 510 |
| DraI | TTTAAA | 1 cut(s) | 454 |
| DriI | GACNNNNNGTC | 1 cut(s) | 489 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 489 |
| Eco24I | GRGCYC | 1 cut(s) | 355 |
| EcoT38I | GRGCYC | 1 cut(s) | 355 |
| FaeI | CATG | 9 cut(s) | 35, 206, 237, 336, 401, 411, 466, 521, 569 |
| FaqI | GGGAC | 1 cut(s) | 299 |
| FatI | CATG | 9 cut(s) | 31, 202, 233, 332, 397, 407, 462, 517, 565 |
| Fnu4HI | GCNGC | 4 cut(s) | 114, 421, 525, 540 |
| FriOI | GRGCYC | 1 cut(s) | 355 |
| Fsp4HI | GCNGC | 4 cut(s) | 114, 421, 525, 540 |
| FspBI | CTAG | 2 cut(s) | 249, 574 |
| GlaI | GCGC | 1 cut(s) | 338 |
| GluI | GCNGC | 4 cut(s) | 114, 421, 525, 540 |
| HaeII | RGCGCY | 1 cut(s) | 340 |
| HaeIII | GGCC | 2 cut(s) | 437, 539 |
| HgaI | GACGC | 1 cut(s) | 228 |
| HhaI | GCGC | 1 cut(s) | 339 |
| Hin1I | GRCGYC | 1 cut(s) | 239 |
| Hin1II | CATG | 9 cut(s) | 35, 206, 237, 336, 401, 411, 466, 521, 569 |
| Hin6I | GCGC | 1 cut(s) | 337 |
| HinP1I | GCGC | 1 cut(s) | 337 |
| HincII | GTYRAC | 1 cut(s) | 243 |
| HindII | GTYRAC | 1 cut(s) | 243 |
| HindIII | AAGCTT | 1 cut(s) | 300 |
| HinfI | GANTC | 1 cut(s) | 514 |
| Hpy166II | GTNNAC | 2 cut(s) | 181, 243 |
| Hpy8I | GTNNAC | 2 cut(s) | 181, 243 |
| Hpy99I | CGWCG | 1 cut(s) | 50 |
| HpyAV | CCTTC | 2 cut(s) | 46, 529 |
| HpyCH4IV | ACGT | 1 cut(s) | 382 |
| HpyCH4V | TGCA | 7 cut(s) | 233, 397, 423, 462, 551, 565, 569 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 548, 562 |
| HpyF3I | CTNAG | 3 cut(s) | 74, 105, 510 |
| HpySE526I | ACGT | 1 cut(s) | 382 |
| Hsp92I | GRCGYC | 1 cut(s) | 239 |
| Hsp92II | CATG | 9 cut(s) | 35, 206, 237, 336, 401, 411, 466, 521, 569 |
| HspAI | GCGC | 1 cut(s) | 337 |
| LmnI | GCTCC | 2 cut(s) | 276, 350 |
| LpnPI | CCDG | 1 cut(s) | 268 |
| Lsp1109I | GCAGC | 2 cut(s) | 407, 511 |
| MaeI | CTAG | 2 cut(s) | 249, 574 |
| MaeII | ACGT | 1 cut(s) | 382 |
| MaeIII | GTNAC | 3 cut(s) | 77, 100, 307 |
| MboII | GAAGA | 2 cut(s) | 155, 319 |
| MfeI | CAATTG | 1 cut(s) | 546 |
| MhlI | GDGCHC | 1 cut(s) | 355 |
| MluCI | AATT | 8 cut(s) | 16, 214, 255, 269, 290, 387, 424, 546 |
| MnlI | CCTC | 2 cut(s) | 91, 427 |
| MseI | TTAA | 6 cut(s) | 213, 254, 272, 453, 497, 503 |
| MslI | CAYNNNNRTG | 2 cut(s) | 165, 396 |
| MunI | CAATTG | 1 cut(s) | 546 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 548, 562 |
| NlaIII | CATG | 9 cut(s) | 35, 206, 237, 336, 401, 411, 466, 521, 569 |
| NlaIV | GGNNCC | 1 cut(s) | 352 |
| NmuCI | GTSAC | 3 cut(s) | 77, 100, 307 |
| NspI | RCATGY | 3 cut(s) | 35, 411, 569 |
| PaeI | GCATGC | 1 cut(s) | 569 |
| PciI | ACATGT | 2 cut(s) | 31, 407 |
| PfeI | GAWTC | 1 cut(s) | 514 |
| PkrI | GCNGC | 4 cut(s) | 115, 422, 526, 541 |
| Ppu21I | YACGTR | 1 cut(s) | 383 |
| PscI | ACATGT | 2 cut(s) | 31, 407 |
| PspN4I | GGNNCC | 1 cut(s) | 352 |
| RsaI | GTAC | 4 cut(s) | 10, 30, 182, 372 |
| RsaNI | GTAC | 4 cut(s) | 9, 29, 181, 371 |
| RseI | CAYNNNNRTG | 2 cut(s) | 165, 396 |
| SaqAI | TTAA | 6 cut(s) | 213, 254, 272, 453, 497, 503 |
| SatI | GCNGC | 4 cut(s) | 114, 421, 525, 540 |
| SduI | GDGCHC | 1 cut(s) | 355 |
| SetI | ASST | 5 cut(s) | 102, 281, 304, 385, 503 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 165, 396 |
| SmlI | CTYRAG | 2 cut(s) | 124, 220 |
| SmoI | CTYRAG | 2 cut(s) | 124, 220 |
| SphI | GCATGC | 1 cut(s) | 569 |
| Sse9I | AATT | 8 cut(s) | 16, 214, 255, 269, 290, 387, 424, 546 |
| SsiI | CCGC | 2 cut(s) | 113, 540 |
| SspMI | CTAG | 2 cut(s) | 249, 574 |
| TaiI | ACGT | 1 cut(s) | 385 |
| TasI | AATT | 8 cut(s) | 16, 214, 255, 269, 290, 387, 424, 546 |
| TatI | WGTACW | 3 cut(s) | 28, 180, 370 |
| TauI | GCSGC | 2 cut(s) | 116, 542 |
| TfiI | GAWTC | 1 cut(s) | 514 |
| Tru1I | TTAA | 6 cut(s) | 213, 254, 272, 453, 497, 503 |
| Tru9I | TTAA | 6 cut(s) | 213, 254, 272, 453, 497, 503 |
| TseFI | GTSAC | 3 cut(s) | 77, 100, 307 |
| TseI | GCWGC | 2 cut(s) | 420, 524 |
| Tsp45I | GTSAC | 3 cut(s) | 77, 100, 307 |
| TspDTI | ATGAA | 1 cut(s) | 380 |
| TspGWI | ACGGA | 1 cut(s) | 104 |
| XapI | RAATTY | 1 cut(s) | 387 |
| XceI | RCATGY | 3 cut(s) | 35, 411, 569 |
| XspI | CTAG | 2 cut(s) | 249, 574 |