zinc-binding in reverse transcriptase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Cation_ATPase_N | PF00690 | 111 - 173 | 1e-10 | Cation transporter/ATPase, N-terminus |
| E1-E2_ATPase | PF00122 | 231 - 323 | 5.6e-15 | P-type ATPase actuator domain |
| Cation_ATPase | PF13246 | 505 - 657 | 6e-25 | P-type ATPase, cytoplasmic domain N |
| Cation_ATPase_C | PF00689 | 840 - 1007 | 3.5e-24 | Cation transporting ATPase, C-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 27, 2651 |
| AarI | CACCTGC | 1 cut(s) | 1012 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3108 |
| Acc36I | ACCTGC | 1 cut(s) | 1012 |
| AccB1I | GGYRCC | 1 cut(s) | 3062 |
| AccBSI | CCGCTC | 2 cut(s) | 819, 2524 |
| AccI | GTMKAC | 4 cut(s) | 638, 718, 3324, 3392 |
| AccII | CGCG | 1 cut(s) | 1903 |
| AclWI | GGATC | 6 cut(s) | 433, 509, 1540, 1982, 3160, 3173 |
| AcoI | YGGCCR | 2 cut(s) | 814, 3825 |
| AcsI | RAATTY | 4 cut(s) | 419, 969, 1582, 2825 |
| AcuI | CTGAAG | 5 cut(s) | 77, 1215, 1239, 1731, 2358 |
| AcyI | GRCGYC | 1 cut(s) | 3801 |
| AdeI | CACNNNGTG | 2 cut(s) | 580, 1343 |
| AfeI | AGCGCT | 1 cut(s) | 3021 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 151, 1021, 1148, 3059, 3379, 3902 |
| AflII | CTTAAG | 1 cut(s) | 770 |
| AflIII | ACRYGT | 1 cut(s) | 467 |
| AgeI | ACCGGT | 2 cut(s) | 50, 254 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1597, 1677 |
| AhlI | ACTAGT | 1 cut(s) | 139 |
| AjnI | CCWGG | 2 cut(s) | 1147, 3053 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 332, 364 |
| AleI | CACNNNNGTG | 1 cut(s) | 2771 |
| Alw21I | GWGCWC | 4 cut(s) | 193, 2233, 3036, 3812 |
| AlwI | GGATC | 6 cut(s) | 433, 509, 1540, 1982, 3160, 3173 |
| Aor51HI | AGCGCT | 1 cut(s) | 3021 |
| ApeKI | GCWGC | 8 cut(s) | 212, 599, 602, 1076, 2449, 2452, 3502, 3699 |
| ApoI | RAATTY | 4 cut(s) | 419, 969, 1582, 2825 |
| AsiGI | ACCGGT | 2 cut(s) | 50, 254 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1224, 1872, 2433 |
| AspLEI | GCGC | 4 cut(s) | 78, 1903, 3022, 3215 |
| AspS9I | GGNCC | 7 cut(s) | 252, 787, 2573, 2854, 3218, 3420, 3838 |
| AsuC2I | CCSGG | 2 cut(s) | 1971, 3616 |
| AsuII | TTCGAA | 2 cut(s) | 2836, 3891 |
| AsuNHI | GCTAGC | 1 cut(s) | 980 |
| AvaII | GGWCC | 5 cut(s) | 252, 787, 2573, 2854, 3838 |
| AxyI | CCTNAGG | 1 cut(s) | 1917 |
| BalI | TGGCCA | 1 cut(s) | 3827 |
| BanI | GGYRCC | 1 cut(s) | 3062 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3898, 3930 |
| BbsI | GAAGAC | 1 cut(s) | 2190 |
| Bbv12I | GWGCWC | 4 cut(s) | 193, 2233, 3036, 3812 |
| BbvCI | CCTCAGC | 1 cut(s) | 3687 |
| BbvI | GCAGC | 8 cut(s) | 199, 589, 611, 1063, 2461, 2464, 3489, 3711 |
| BceAI | ACGGC | 1 cut(s) | 3382 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3665, 3699 |
| BciT130I | CCWGG | 2 cut(s) | 1149, 3055 |
| BclI | TGATCA | 3 cut(s) | 1753, 2605, 3849 |
| BcnI | CCSGG | 2 cut(s) | 1971, 3616 |
| BcuI | ACTAGT | 1 cut(s) | 139 |
| BfmI | CTRYAG | 4 cut(s) | 323, 2234, 2388, 3393 |
| BfoI | RGCGCY | 1 cut(s) | 3023 |
| BfrI | CTTAAG | 1 cut(s) | 770 |
| BfuAI | ACCTGC | 1 cut(s) | 1012 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3824 |
| BmcAI | AGTACT | 1 cut(s) | 1224 |
| Bme1390I | CCNGG | 4 cut(s) | 1149, 1971, 3055, 3616 |
| Bme18I | GGWCC | 5 cut(s) | 252, 787, 2573, 2854, 3838 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1597, 1677 |
| BmgT120I | GGNCC | 7 cut(s) | 252, 787, 2573, 2854, 3218, 3420, 3838 |
| BmiI | GGNNCC | 4 cut(s) | 66, 253, 884, 3064 |
| BmrFI | CCNGG | 4 cut(s) | 1149, 1971, 3055, 3616 |
| BmrI | ACTGGG | 1 cut(s) | 951 |
| BmsI | GCATC | 6 cut(s) | 307, 1324, 2272, 3673, 3700, 3754 |
| BmtI | GCTAGC | 1 cut(s) | 984 |
| BmuI | ACTGGG | 1 cut(s) | 951 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2310 |
| BpiI | GAAGAC | 1 cut(s) | 2190 |
| BpmI | CTGGAG | 3 cut(s) | 870, 1593, 1842 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2064, 3687 |
| Bpu14I | TTCGAA | 2 cut(s) | 2836, 3891 |
| BpuEI | CTTGAG | 2 cut(s) | 627, 3081 |
| BpuMI | CCSGG | 2 cut(s) | 1971, 3616 |
| Bsa29I | ATCGAT | 1 cut(s) | 124 |
| BsaAI | YACGTR | 1 cut(s) | 987 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3429 |
| BsaHI | GRCGYC | 1 cut(s) | 3801 |
| BsaI | GGTCTC | 2 cut(s) | 41, 2751 |
| BsaJI | CCNNGG | 7 cut(s) | 811, 1317, 1970, 2397, 2635, 3053, 3054 |
| BsaWI | WCCGGW | 3 cut(s) | 50, 254, 3835 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2581, 2611 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 151, 1021, 1148, 3059, 3379, 3902 |
| Bse118I | RCCGGY | 2 cut(s) | 50, 254 |
| Bse21I | CCTNAGG | 1 cut(s) | 1917 |
| Bse3DI | GCAATG | 4 cut(s) | 43, 1185, 1336, 1831 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3429 |
| BseBI | CCWGG | 2 cut(s) | 1149, 3055 |
| BseCI | ATCGAT | 1 cut(s) | 124 |
| BseDI | CCNNGG | 7 cut(s) | 811, 1317, 1970, 2397, 2635, 3053, 3054 |
| BseJI | GATNNNNATC | 1 cut(s) | 3429 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 151, 1021, 1148, 3059, 3379, 3902 |
| BseMI | GCAATG | 4 cut(s) | 43, 1185, 1336, 1831 |
| BseRI | GAGGAG | 2 cut(s) | 3014, 3263 |
| BseXI | GCAGC | 8 cut(s) | 199, 589, 611, 1063, 2461, 2464, 3489, 3711 |
| BseYI | CCCAGC | 2 cut(s) | 565, 1573 |
| BsgI | GTGCAG | 1 cut(s) | 2555 |
| Bsh1236I | CGCG | 1 cut(s) | 1903 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1681, 3246 |
| BshNI | GGYRCC | 1 cut(s) | 3062 |
| BshTI | ACCGGT | 2 cut(s) | 50, 254 |
| BshVI | ATCGAT | 1 cut(s) | 124 |
| BsiEI | CGRYCG | 2 cut(s) | 1681, 3246 |
| BsiHKAI | GWGCWC | 4 cut(s) | 193, 2233, 3036, 3812 |
| BsiSI | CCGG | 7 cut(s) | 51, 255, 1970, 2600, 3522, 3616, 3836 |
| BslFI | GGGAC | 4 cut(s) | 265, 2347, 2427, 3034 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 151, 1021, 1148, 3059, 3379, 3902 |
| BsmBI | CGTCTC | 3 cut(s) | 1256, 1605, 3261 |
| BsmFI | GGGAC | 4 cut(s) | 265, 2347, 2427, 3034 |
| BsmI | GAATGC | 1 cut(s) | 3883 |
| Bso31I | GGTCTC | 2 cut(s) | 41, 2751 |
| Bsp119I | TTCGAA | 2 cut(s) | 2836, 3891 |
| Bsp1286I | GDGCHC | 4 cut(s) | 193, 2233, 3036, 3812 |
| Bsp1407I | TGTACA | 3 cut(s) | 486, 1690, 1730 |
| Bsp19I | CCATGG | 1 cut(s) | 1317 |
| BspDI | ATCGAT | 1 cut(s) | 124 |
| BspFNI | CGCG | 1 cut(s) | 1903 |
| BspLI | GGNNCC | 4 cut(s) | 66, 253, 884, 3064 |
| BspMAI | CTGCAG | 1 cut(s) | 2238 |
| BspMI | ACCTGC | 1 cut(s) | 1012 |
| BspOI | GCTAGC | 1 cut(s) | 984 |
| BspPI | GGATC | 6 cut(s) | 433, 509, 1540, 1982, 3160, 3173 |
| BspT104I | TTCGAA | 2 cut(s) | 2836, 3891 |
| BspT107I | GGYRCC | 1 cut(s) | 3062 |
| BspTI | CTTAAG | 1 cut(s) | 770 |
| BspTNI | GGTCTC | 2 cut(s) | 41, 2751 |
| BsrBI | CCGCTC | 2 cut(s) | 819, 2524 |
| BsrDI | GCAATG | 4 cut(s) | 43, 1185, 1336, 1831 |
| BsrFI | RCCGGY | 2 cut(s) | 50, 254 |
| BsrGI | TGTACA | 3 cut(s) | 486, 1690, 1730 |
| BssAI | RCCGGY | 2 cut(s) | 50, 254 |
| BssECI | CCNNGG | 7 cut(s) | 811, 1317, 1970, 2397, 2635, 3053, 3054 |
| BssNAI | GTATAC | 1 cut(s) | 639 |
| BssNI | GRCGYC | 1 cut(s) | 3801 |
| BssT1I | CCWWGG | 2 cut(s) | 1317, 2397 |
| Bst1107I | GTATAC | 1 cut(s) | 639 |
| Bst2UI | CCWGG | 2 cut(s) | 1149, 3055 |
| Bst6I | CTCTTC | 3 cut(s) | 546, 2663, 3032 |
| BstACI | GRCGYC | 1 cut(s) | 3801 |
| BstAFI | CTTAAG | 1 cut(s) | 770 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1624 |
| BstAUI | TGTACA | 3 cut(s) | 486, 1690, 1730 |
| BstBAI | YACGTR | 1 cut(s) | 987 |
| BstBI | TTCGAA | 2 cut(s) | 2836, 3891 |
| BstDSI | CCRYGG | 2 cut(s) | 811, 1317 |
| BstFNI | CGCG | 1 cut(s) | 1903 |
| BstH2I | RGCGCY | 1 cut(s) | 3023 |
| BstHHI | GCGC | 4 cut(s) | 78, 1903, 3022, 3215 |
| BstMCI | CGRYCG | 2 cut(s) | 1681, 3246 |
| BstNI | CCWGG | 2 cut(s) | 1149, 3055 |
| BstNSI | RCATGY | 2 cut(s) | 197, 471 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2310 |
| BstSCI | CCNGG | 4 cut(s) | 1147, 1969, 3053, 3614 |
| BstSFI | CTRYAG | 4 cut(s) | 323, 2234, 2388, 3393 |
| BstUI | CGCG | 1 cut(s) | 1903 |
| BstV1I | GCAGC | 8 cut(s) | 199, 589, 611, 1063, 2461, 2464, 3489, 3711 |
| BstV2I | GAAGAC | 1 cut(s) | 2190 |
| BstZ17I | GTATAC | 1 cut(s) | 639 |
| Bsu15I | ATCGAT | 1 cut(s) | 124 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1917 |
| BsuTUI | ATCGAT | 1 cut(s) | 124 |
| BtgI | CCRYGG | 2 cut(s) | 811, 1317 |
| BtgZI | GCGATG | 1 cut(s) | 3222 |
| BtsI | GCAGTG | 3 cut(s) | 928, 2231, 3655 |
| BveI | ACCTGC | 1 cut(s) | 1012 |
| CfoI | GCGC | 4 cut(s) | 78, 1903, 3022, 3215 |
| Cfr10I | RCCGGY | 2 cut(s) | 50, 254 |
| Cfr13I | GGNCC | 7 cut(s) | 252, 787, 2573, 2854, 3218, 3420, 3838 |
| ClaI | ATCGAT | 1 cut(s) | 124 |
| CseI | GACGC | 4 cut(s) | 2108, 3278, 3458, 3809 |
| CspAI | ACCGGT | 2 cut(s) | 50, 254 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2565, 2600 |
| DraI | TTTAAA | 1 cut(s) | 1032 |
| DraIII | CACNNNGTG | 2 cut(s) | 580, 1343 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3108 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1597, 1677 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3108 |
| EaeI | YGGCCR | 2 cut(s) | 814, 3825 |
| Eam1104I | CTCTTC | 3 cut(s) | 546, 2663, 3032 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1597, 1677 |
| EarI | CTCTTC | 3 cut(s) | 546, 2663, 3032 |
| EciI | GGCGGA | 2 cut(s) | 119, 3805 |
| Eco130I | CCWWGG | 2 cut(s) | 1317, 2397 |
| Eco147I | AGGCCT | 2 cut(s) | 1388, 2954 |
| Eco31I | GGTCTC | 2 cut(s) | 41, 2751 |
| Eco32I | GATATC | 1 cut(s) | 2362 |
| Eco47I | GGWCC | 5 cut(s) | 252, 787, 2573, 2854, 3838 |
| Eco47III | AGCGCT | 1 cut(s) | 3021 |
| Eco57I | CTGAAG | 5 cut(s) | 77, 1215, 1239, 1731, 2358 |
| Eco81I | CCTNAGG | 1 cut(s) | 1917 |
| EcoO109I | RGGNCCY | 1 cut(s) | 787 |
| EcoRI | GAATTC | 2 cut(s) | 969, 2825 |
| EcoRII | CCWGG | 2 cut(s) | 1147, 3053 |
| EcoRV | GATATC | 1 cut(s) | 2362 |
| EcoT14I | CCWWGG | 2 cut(s) | 1317, 2397 |
| ErhI | CCWWGG | 2 cut(s) | 1317, 2397 |
| Esp3I | CGTCTC | 3 cut(s) | 1256, 1605, 3261 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 332, 364, 3779, 3811 |
| FaqI | GGGAC | 4 cut(s) | 265, 2347, 2427, 3034 |
| FauI | CCCGC | 4 cut(s) | 2529, 3273, 3356, 3895 |
| FauNDI | CATATG | 2 cut(s) | 663, 1090 |
| FbaI | TGATCA | 3 cut(s) | 1753, 2605, 3849 |
| FblI | GTMKAC | 4 cut(s) | 638, 718, 3324, 3392 |
| GlaI | GCGC | 4 cut(s) | 77, 1902, 3021, 3214 |
| GsaI | CCCAGC | 2 cut(s) | 569, 1577 |
| GsuI | CTGGAG | 3 cut(s) | 870, 1593, 1842 |
| HaeII | RGCGCY | 1 cut(s) | 3023 |
| HapII | CCGG | 7 cut(s) | 51, 255, 1970, 2600, 3522, 3616, 3836 |
| HgaI | GACGC | 4 cut(s) | 2108, 3278, 3458, 3809 |
| HhaI | GCGC | 4 cut(s) | 78, 1903, 3022, 3215 |
| Hin1I | GRCGYC | 1 cut(s) | 3801 |
| Hin6I | GCGC | 4 cut(s) | 76, 1901, 3020, 3213 |
| HinP1I | GCGC | 4 cut(s) | 76, 1901, 3020, 3213 |
| HincII | GTYRAC | 4 cut(s) | 719, 1785, 1967, 3202 |
| HindII | GTYRAC | 4 cut(s) | 719, 1785, 1967, 3202 |
| HindIII | AAGCTT | 1 cut(s) | 2213 |
| HpaI | GTTAAC | 1 cut(s) | 1785 |
| HpaII | CCGG | 7 cut(s) | 51, 255, 1970, 2600, 3522, 3616, 3836 |
| Hpy99I | CGWCG | 3 cut(s) | 3452, 3463, 3680 |
| HpyCH4IV | ACGT | 4 cut(s) | 986, 1598, 2619, 3917 |
| HpySE526I | ACGT | 4 cut(s) | 986, 1598, 2619, 3917 |
| Hsp92I | GRCGYC | 1 cut(s) | 3801 |
| HspAI | GCGC | 4 cut(s) | 76, 1901, 3020, 3213 |
| Ksp22I | TGATCA | 3 cut(s) | 1753, 2605, 3849 |
| KspAI | GTTAAC | 1 cut(s) | 1785 |
| LmnI | GCTCC | 3 cut(s) | 3027, 3499, 3735 |
| Lsp1109I | GCAGC | 8 cut(s) | 199, 589, 611, 1063, 2461, 2464, 3489, 3711 |
| LweI | GCATC | 6 cut(s) | 307, 1324, 2272, 3673, 3700, 3754 |
| MaeII | ACGT | 4 cut(s) | 986, 1598, 2619, 3917 |
| MbiI | CCGCTC | 2 cut(s) | 819, 2524 |
| MfeI | CAATTG | 4 cut(s) | 270, 828, 1282, 1539 |
| MhlI | GDGCHC | 4 cut(s) | 193, 2233, 3036, 3812 |
| MlsI | TGGCCA | 1 cut(s) | 3827 |
| MluNI | TGGCCA | 1 cut(s) | 3827 |
| MlyI | GAGTC | 7 cut(s) | 13, 852, 1575, 1725, 1976, 2995, 3099 |
| MmeI | TCCRAC | 1 cut(s) | 1042 |
| Mox20I | TGGCCA | 1 cut(s) | 3827 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1224, 1872, 2433 |
| MscI | TGGCCA | 1 cut(s) | 3827 |
| MslI | CAYNNNNRTG | 4 cut(s) | 617, 921, 2771, 3311 |
| Msp20I | TGGCCA | 1 cut(s) | 3827 |
| MspA1I | CMGCKG | 4 cut(s) | 602, 1304, 3223, 3702 |
| MspCI | CTTAAG | 1 cut(s) | 770 |
| MspI | CCGG | 7 cut(s) | 51, 255, 1970, 2600, 3522, 3616, 3836 |
| MspR9I | CCNGG | 4 cut(s) | 1149, 1971, 3055, 3616 |
| MunI | CAATTG | 4 cut(s) | 270, 828, 1282, 1539 |
| Mva1269I | GAATGC | 1 cut(s) | 3883 |
| MvaI | CCWGG | 2 cut(s) | 1149, 3055 |
| MvnI | CGCG | 1 cut(s) | 1903 |
| NciI | CCSGG | 2 cut(s) | 1971, 3616 |
| NcoI | CCATGG | 1 cut(s) | 1317 |
| NdeI | CATATG | 2 cut(s) | 663, 1090 |
| NheI | GCTAGC | 1 cut(s) | 980 |
| NlaIV | GGNNCC | 4 cut(s) | 66, 253, 884, 3064 |
| NmeAIII | GCCGAG | 1 cut(s) | 3907 |
| NmuCI | GTSAC | 6 cut(s) | 5, 844, 1343, 2260, 2513, 3908 |
| NspI | RCATGY | 2 cut(s) | 197, 471 |
| NspV | TTCGAA | 2 cut(s) | 2836, 3891 |
| OliI | CACNNNNGTG | 1 cut(s) | 2771 |
| PaqCI | CACCTGC | 1 cut(s) | 1012 |
| PasI | CCCWGGG | 1 cut(s) | 3054 |
| PceI | AGGCCT | 2 cut(s) | 1388, 2954 |
| PciI | ACATGT | 1 cut(s) | 467 |
| PctI | GAATGC | 1 cut(s) | 3883 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1224, 1872, 2433 |
| PfeI | GAWTC | 9 cut(s) | 126, 875, 962, 1065, 2551, 2594, 2920, 3092, 3134 |
| PflFI | GACNNNGTC | 1 cut(s) | 3108 |
| PinAI | ACCGGT | 2 cut(s) | 50, 254 |
| Ple19I | CGATCG | 1 cut(s) | 3246 |
| PleI | GAGTC | 7 cut(s) | 12, 851, 1574, 1724, 1976, 2995, 3099 |
| PpsI | GAGTC | 7 cut(s) | 12, 851, 1574, 1724, 1976, 2995, 3099 |
| Ppu21I | YACGTR | 1 cut(s) | 987 |
| PpuMI | RGGWCCY | 1 cut(s) | 787 |
| PscI | ACATGT | 1 cut(s) | 467 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2310 |
| PsiI | TTATAA | 2 cut(s) | 27, 2651 |
| Psp5II | RGGWCCY | 1 cut(s) | 787 |
| Psp6I | CCWGG | 2 cut(s) | 1147, 3053 |
| PspFI | CCCAGC | 2 cut(s) | 565, 1573 |
| PspGI | CCWGG | 2 cut(s) | 1147, 3053 |
| PspN4I | GGNNCC | 4 cut(s) | 66, 253, 884, 3064 |
| PspPI | GGNCC | 7 cut(s) | 252, 787, 2573, 2854, 3218, 3420, 3838 |
| PspPPI | RGGWCCY | 1 cut(s) | 787 |
| PstI | CTGCAG | 1 cut(s) | 2238 |
| PsyI | GACNNNGTC | 1 cut(s) | 3108 |
| PvuI | CGATCG | 1 cut(s) | 3246 |
| PvuII | CAGCTG | 2 cut(s) | 602, 1304 |
| RseI | CAYNNNNRTG | 4 cut(s) | 617, 921, 2771, 3311 |
| SalI | GTCGAC | 1 cut(s) | 717 |
| Sau96I | GGNCC | 7 cut(s) | 252, 787, 2573, 2854, 3218, 3420, 3838 |
| ScaI | AGTACT | 1 cut(s) | 1224 |
| SchI | GAGTC | 7 cut(s) | 13, 852, 1575, 1725, 1976, 2995, 3099 |
| ScrFI | CCNGG | 4 cut(s) | 1149, 1971, 3055, 3616 |
| SduI | GDGCHC | 4 cut(s) | 193, 2233, 3036, 3812 |
| SfaNI | GCATC | 6 cut(s) | 307, 1324, 2272, 3673, 3700, 3754 |
| SfcI | CTRYAG | 4 cut(s) | 323, 2234, 2388, 3393 |
| SfuI | TTCGAA | 2 cut(s) | 2836, 3891 |
| SinI | GGWCC | 5 cut(s) | 252, 787, 2573, 2854, 3838 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 617, 921, 2771, 3311 |
| SmlI | CTYRAG | 4 cut(s) | 10, 642, 770, 3096 |
| SmoI | CTYRAG | 4 cut(s) | 10, 642, 770, 3096 |
| SpeI | ACTAGT | 1 cut(s) | 139 |
| SseBI | AGGCCT | 2 cut(s) | 1388, 2954 |
| SspI | AATATT | 2 cut(s) | 1995, 2470 |
| StuI | AGGCCT | 2 cut(s) | 1388, 2954 |
| StyD4I | CCNGG | 4 cut(s) | 1147, 1969, 3053, 3614 |
| StyI | CCWWGG | 2 cut(s) | 1317, 2397 |
| TaiI | ACGT | 4 cut(s) | 989, 1601, 2622, 3920 |
| TaqII | GACCGA | 1 cut(s) | 2649 |
| TatI | WGTACW | 6 cut(s) | 486, 956, 1154, 1222, 1690, 1730 |
| TfiI | GAWTC | 9 cut(s) | 126, 875, 962, 1065, 2551, 2594, 2920, 3092, 3134 |
| TseFI | GTSAC | 6 cut(s) | 5, 844, 1343, 2260, 2513, 3908 |
| TseI | GCWGC | 8 cut(s) | 212, 599, 602, 1076, 2449, 2452, 3502, 3699 |
| Tsp45I | GTSAC | 6 cut(s) | 5, 844, 1343, 2260, 2513, 3908 |
| TspGWI | ACGGA | 5 cut(s) | 193, 800, 3074, 3098, 3279 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3108 |
| Vha464I | CTTAAG | 1 cut(s) | 770 |
| VpaK11BI | GGWCC | 5 cut(s) | 252, 787, 2573, 2854, 3838 |
| XapI | RAATTY | 4 cut(s) | 419, 969, 1582, 2825 |
| XceI | RCATGY | 2 cut(s) | 197, 471 |
| XmiI | GTMKAC | 4 cut(s) | 638, 718, 3324, 3392 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1224, 1872, 2433 |
| ZrmI | AGTACT | 1 cut(s) | 1224 |