Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 121 |
| AciI | CCGC | 1 cut(s) | 133 |
| AcsI | RAATTY | 3 cut(s) | 103, 123, 250 |
| AcuI | CTGAAG | 1 cut(s) | 56 |
| AcyI | GRCGYC | 1 cut(s) | 118 |
| AluBI | AGCT | 3 cut(s) | 79, 278, 359 |
| AluI | AGCT | 3 cut(s) | 79, 278, 359 |
| Alw26I | GTCTC | 3 cut(s) | 158, 226, 293 |
| AoxI | GGCC | 1 cut(s) | 326 |
| ApeKI | GCWGC | 1 cut(s) | 76 |
| ApoI | RAATTY | 3 cut(s) | 103, 123, 250 |
| AsuHPI | GGTGA | 1 cut(s) | 332 |
| BbvI | GCAGC | 1 cut(s) | 88 |
| BccI | CCATC | 1 cut(s) | 337 |
| BceAI | ACGGC | 1 cut(s) | 324 |
| BcoDI | GTCTC | 3 cut(s) | 158, 226, 293 |
| BfaI | CTAG | 1 cut(s) | 360 |
| BisI | GCNGC | 1 cut(s) | 77 |
| BlsI | GCNGC | 1 cut(s) | 78 |
| BmsI | GCATC | 1 cut(s) | 201 |
| BoxI | GACNNNNGTC | 1 cut(s) | 117 |
| BpmI | CTGGAG | 1 cut(s) | 250 |
| BpuEI | CTTGAG | 1 cut(s) | 249 |
| BsaHI | GRCGYC | 1 cut(s) | 118 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 134, 164 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| BseGI | GGATG | 2 cut(s) | 115, 153 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BseRI | GAGGAG | 1 cut(s) | 6 |
| BseXI | GCAGC | 1 cut(s) | 88 |
| BshFI | GGCC | 1 cut(s) | 328 |
| BsmAI | GTCTC | 3 cut(s) | 158, 226, 293 |
| BsnI | GGCC | 1 cut(s) | 328 |
| Bsp143I | GATC | 2 cut(s) | 67, 362 |
| BspACI | CCGC | 1 cut(s) | 133 |
| BspANI | GGCC | 1 cut(s) | 328 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| BssMI | GATC | 2 cut(s) | 67, 362 |
| BssNI | GRCGYC | 1 cut(s) | 118 |
| Bst4CI | ACNGT | 1 cut(s) | 38 |
| BstACI | GRCGYC | 1 cut(s) | 118 |
| BstC8I | GCNNGC | 2 cut(s) | 195, 216 |
| BstF5I | GGATG | 2 cut(s) | 115, 153 |
| BstKTI | GATC | 2 cut(s) | 70, 365 |
| BstMAI | GTCTC | 3 cut(s) | 158, 226, 293 |
| BstMBI | GATC | 2 cut(s) | 67, 362 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 215 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 117 |
| BstV1I | GCAGC | 1 cut(s) | 88 |
| BsuRI | GGCC | 1 cut(s) | 328 |
| BtgZI | GCGATG | 1 cut(s) | 224 |
| BtsCI | GGATG | 2 cut(s) | 115, 153 |
| BtsIMutI | CAGTG | 1 cut(s) | 127 |
| Cac8I | GCNNGC | 2 cut(s) | 195, 216 |
| CviAII | CATG | 1 cut(s) | 316 |
| CviJI | RGCY | 8 cut(s) | 79, 180, 228, 263, 278, 311, 328, 359 |
| CviKI_1 | RGCY | 8 cut(s) | 79, 180, 228, 263, 278, 311, 328, 359 |
| DpnI | GATC | 2 cut(s) | 69, 364 |
| DpnII | GATC | 2 cut(s) | 67, 362 |
| DraI | TTTAAA | 2 cut(s) | 184, 274 |
| Eco57I | CTGAAG | 1 cut(s) | 56 |
| EcoRI | GAATTC | 1 cut(s) | 123 |
| FaeI | CATG | 1 cut(s) | 319 |
| FaiI | YATR | 8 cut(s) | 32, 42, 61, 176, 281, 294, 317, 353 |
| FatI | CATG | 1 cut(s) | 315 |
| Fnu4HI | GCNGC | 1 cut(s) | 77 |
| FokI | GGATG | 2 cut(s) | 122, 160 |
| Fsp4HI | GCNGC | 1 cut(s) | 77 |
| FspBI | CTAG | 1 cut(s) | 360 |
| GluI | GCNGC | 1 cut(s) | 77 |
| GsuI | CTGGAG | 1 cut(s) | 250 |
| HaeIII | GGCC | 1 cut(s) | 328 |
| Hin1I | GRCGYC | 1 cut(s) | 118 |
| Hin1II | CATG | 1 cut(s) | 319 |
| HinfI | GANTC | 1 cut(s) | 234 |
| HphI | GGTGA | 1 cut(s) | 332 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy99I | CGWCG | 1 cut(s) | 123 |
| HpyCH4III | ACNGT | 1 cut(s) | 38 |
| HpyCH4IV | ACGT | 2 cut(s) | 27, 118 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 215 |
| HpySE526I | ACGT | 2 cut(s) | 27, 118 |
| Hsp92I | GRCGYC | 1 cut(s) | 118 |
| Hsp92II | CATG | 1 cut(s) | 319 |
| Kzo9I | GATC | 2 cut(s) | 67, 362 |
| LpnPI | CCDG | 2 cut(s) | 115, 214 |
| Lsp1109I | GCAGC | 1 cut(s) | 88 |
| LweI | GCATC | 1 cut(s) | 201 |
| MaeI | CTAG | 1 cut(s) | 360 |
| MaeII | ACGT | 2 cut(s) | 27, 118 |
| MalI | GATC | 2 cut(s) | 69, 364 |
| MboI | GATC | 2 cut(s) | 67, 362 |
| MboII | GAAGA | 1 cut(s) | 62 |
| MluCI | AATT | 4 cut(s) | 22, 103, 123, 250 |
| MlyI | GAGTC | 1 cut(s) | 228 |
| MnlI | CCTC | 4 cut(s) | 27, 138, 164, 318 |
| MseI | TTAA | 2 cut(s) | 183, 273 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 215 |
| NdeII | GATC | 2 cut(s) | 67, 362 |
| NlaIII | CATG | 1 cut(s) | 319 |
| PkrI | GCNGC | 1 cut(s) | 78 |
| PleI | GAGTC | 1 cut(s) | 228 |
| PpsI | GAGTC | 1 cut(s) | 228 |
| PshAI | GACNNNNGTC | 1 cut(s) | 117 |
| SaqAI | TTAA | 2 cut(s) | 183, 273 |
| SatI | GCNGC | 1 cut(s) | 77 |
| Sau3AI | GATC | 2 cut(s) | 67, 362 |
| SchI | GAGTC | 1 cut(s) | 228 |
| SetI | ASST | 6 cut(s) | 30, 81, 121, 175, 280, 361 |
| SfaNI | GCATC | 1 cut(s) | 201 |
| SmlI | CTYRAG | 1 cut(s) | 264 |
| SmoI | CTYRAG | 1 cut(s) | 264 |
| Sse9I | AATT | 4 cut(s) | 22, 103, 123, 250 |
| SsiI | CCGC | 1 cut(s) | 133 |
| SspI | AATATT | 1 cut(s) | 188 |
| SspMI | CTAG | 1 cut(s) | 360 |
| TaaI | ACNGT | 1 cut(s) | 38 |
| TaiI | ACGT | 2 cut(s) | 30, 121 |
| TaqI | TCGA | 1 cut(s) | 121 |
| TasI | AATT | 4 cut(s) | 22, 103, 123, 250 |
| Tru1I | TTAA | 2 cut(s) | 183, 273 |
| Tru9I | TTAA | 2 cut(s) | 183, 273 |
| TscAI | CASTG | 1 cut(s) | 134 |
| TseI | GCWGC | 1 cut(s) | 76 |
| TspDTI | ATGAA | 1 cut(s) | 47 |
| TspRI | CASTG | 1 cut(s) | 134 |
| XapI | RAATTY | 3 cut(s) | 103, 123, 250 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 336 |
| XspI | CTAG | 1 cut(s) | 360 |
| ZraI | GACGTC | 1 cut(s) | 119 |