ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 953 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 142 |
| Acc36I | ACCTGC | 2 cut(s) | 442, 953 |
| AccB1I | GGYRCC | 2 cut(s) | 158, 178 |
| AccBSI | CCGCTC | 1 cut(s) | 18 |
| AccI | GTMKAC | 1 cut(s) | 793 |
| AciI | CCGC | 4 cut(s) | 16, 50, 231, 403 |
| AclI | AACGTT | 1 cut(s) | 1194 |
| AclWI | GGATC | 1 cut(s) | 1207 |
| AcoI | YGGCCR | 1 cut(s) | 147 |
| AcsI | RAATTY | 3 cut(s) | 617, 832, 936 |
| AcuI | CTGAAG | 1 cut(s) | 455 |
| AdeI | CACNNNGTG | 1 cut(s) | 447 |
| AfaI | GTAC | 2 cut(s) | 568, 723 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 285, 363, 399, 1070 |
| AflIII | ACRYGT | 1 cut(s) | 589 |
| AgsI | TTSAA | 3 cut(s) | 1042, 1191, 1217 |
| AjiI | CACGTC | 2 cut(s) | 70, 590 |
| AjnI | CCWGG | 2 cut(s) | 96, 1143 |
| AluBI | AGCT | 3 cut(s) | 269, 338, 506 |
| AluI | AGCT | 3 cut(s) | 269, 338, 506 |
| Alw21I | GWGCWC | 2 cut(s) | 15, 758 |
| Alw44I | GTGCAC | 2 cut(s) | 11, 754 |
| AlwI | GGATC | 1 cut(s) | 1207 |
| Ama87I | CYCGRG | 1 cut(s) | 570 |
| AoxI | GGCC | 3 cut(s) | 147, 197, 215 |
| ApaI | GGGCCC | 1 cut(s) | 201 |
| ApaLI | GTGCAC | 2 cut(s) | 11, 754 |
| ApeKI | GCWGC | 5 cut(s) | 101, 140, 167, 371, 850 |
| ApoI | RAATTY | 3 cut(s) | 617, 832, 936 |
| AseI | ATTAAT | 1 cut(s) | 1136 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 619 |
| AspS9I | GGNCC | 4 cut(s) | 94, 197, 198, 216 |
| AsuHPI | GGTGA | 4 cut(s) | 371, 519, 680, 977 |
| AvaI | CYCGRG | 1 cut(s) | 570 |
| AvaII | GGWCC | 1 cut(s) | 94 |
| AxyI | CCTNAGG | 1 cut(s) | 1068 |
| BaeGI | GKGCMC | 6 cut(s) | 15, 161, 183, 201, 443, 758 |
| BanI | GGYRCC | 2 cut(s) | 158, 178 |
| BanII | GRGCYC | 1 cut(s) | 201 |
| Bbv12I | GWGCWC | 2 cut(s) | 15, 758 |
| BbvI | GCAGC | 5 cut(s) | 88, 152, 179, 358, 862 |
| BccI | CCATC | 4 cut(s) | 148, 455, 659, 1088 |
| BceAI | ACGGC | 2 cut(s) | 134, 153 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 27, 61 |
| BciT130I | CCWGG | 2 cut(s) | 98, 1145 |
| BclI | TGATCA | 1 cut(s) | 736 |
| BfaI | CTAG | 5 cut(s) | 42, 266, 339, 444, 789 |
| BfuAI | ACCTGC | 2 cut(s) | 442, 953 |
| BisI | GCNGC | 5 cut(s) | 102, 141, 168, 372, 851 |
| BlsI | GCNGC | 5 cut(s) | 103, 142, 169, 373, 852 |
| BmcAI | AGTACT | 1 cut(s) | 568 |
| Bme1390I | CCNGG | 2 cut(s) | 98, 1145 |
| Bme18I | GGWCC | 1 cut(s) | 94 |
| BmeT110I | CYCGRG | 1 cut(s) | 570 |
| BmgBI | CACGTC | 2 cut(s) | 70, 590 |
| BmgT120I | GGNCC | 4 cut(s) | 94, 197, 198, 216 |
| BmiI | GGNNCC | 4 cut(s) | 160, 180, 198, 199 |
| BmrFI | CCNGG | 2 cut(s) | 98, 1145 |
| BmsI | GCATC | 4 cut(s) | 47, 523, 1039, 1138 |
| BsaJI | CCNNGG | 2 cut(s) | 33, 162 |
| BsaWI | WCCGGW | 1 cut(s) | 529 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 450, 480, 1037, 1067 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 285, 363, 399, 1070 |
| Bse1I | ACTGG | 2 cut(s) | 493, 1116 |
| Bse21I | CCTNAGG | 1 cut(s) | 1068 |
| Bse3DI | GCAATG | 1 cut(s) | 318 |
| BseBI | CCWGG | 2 cut(s) | 98, 1145 |
| BseDI | CCNNGG | 2 cut(s) | 33, 162 |
| BseGI | GGATG | 6 cut(s) | 541, 670, 949, 1030, 1099, 1153 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 285, 363, 399, 1070 |
| BseMI | GCAATG | 1 cut(s) | 318 |
| BseMII | CTCAG | 3 cut(s) | 81, 717, 1059 |
| BseNI | ACTGG | 2 cut(s) | 493, 1116 |
| BseRI | GAGGAG | 2 cut(s) | 366, 1053 |
| BseSI | GKGCMC | 6 cut(s) | 15, 161, 183, 201, 443, 758 |
| BseX3I | CGGCCG | 1 cut(s) | 147 |
| BseXI | GCAGC | 5 cut(s) | 88, 152, 179, 358, 862 |
| BseYI | CCCAGC | 1 cut(s) | 506 |
| BsgI | GTGCAG | 1 cut(s) | 981 |
| Bsh1285I | CGRYCG | 1 cut(s) | 150 |
| BshFI | GGCC | 3 cut(s) | 149, 199, 217 |
| BshNI | GGYRCC | 2 cut(s) | 158, 178 |
| BsiEI | CGRYCG | 1 cut(s) | 150 |
| BsiHKAI | GWGCWC | 2 cut(s) | 15, 758 |
| BsiHKCI | CYCGRG | 1 cut(s) | 570 |
| BsiSI | CCGG | 1 cut(s) | 530 |
| BslFI | GGGAC | 1 cut(s) | 924 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 285, 363, 399, 1070 |
| BsmFI | GGGAC | 1 cut(s) | 924 |
| BsmI | GAATGC | 1 cut(s) | 253 |
| BsnI | GGCC | 3 cut(s) | 149, 199, 217 |
| BsoBI | CYCGRG | 1 cut(s) | 570 |
| Bsp120I | GGGCCC | 1 cut(s) | 197 |
| Bsp1286I | GDGCHC | 6 cut(s) | 15, 161, 183, 201, 443, 758 |
| Bsp143I | GATC | 3 cut(s) | 185, 736, 1199 |
| Bsp19I | CCATGG | 1 cut(s) | 33 |
| BspACI | CCGC | 4 cut(s) | 16, 50, 231, 403 |
| BspANI | GGCC | 3 cut(s) | 149, 199, 217 |
| BspCNI | CTCAG | 3 cut(s) | 82, 718, 1060 |
| BspLI | GGNNCC | 4 cut(s) | 160, 180, 198, 199 |
| BspMI | ACCTGC | 2 cut(s) | 442, 953 |
| BspPI | GGATC | 1 cut(s) | 1207 |
| BspT107I | GGYRCC | 2 cut(s) | 158, 178 |
| BsrBI | CCGCTC | 1 cut(s) | 18 |
| BsrDI | GCAATG | 1 cut(s) | 318 |
| BsrI | ACTGG | 2 cut(s) | 493, 1116 |
| BssECI | CCNNGG | 2 cut(s) | 33, 162 |
| BssMI | GATC | 3 cut(s) | 185, 736, 1199 |
| BssT1I | CCWWGG | 1 cut(s) | 33 |
| Bst2UI | CCWGG | 2 cut(s) | 98, 1145 |
| Bst4CI | ACNGT | 1 cut(s) | 721 |
| Bst6I | CTCTTC | 1 cut(s) | 695 |
| BstC8I | GCNNGC | 2 cut(s) | 106, 960 |
| BstDEI | CTNAG | 3 cut(s) | 90, 726, 1068 |
| BstDSI | CCRYGG | 1 cut(s) | 33 |
| BstF5I | GGATG | 6 cut(s) | 541, 670, 949, 1030, 1099, 1153 |
| BstKTI | GATC | 3 cut(s) | 188, 739, 1202 |
| BstMBI | GATC | 3 cut(s) | 185, 736, 1199 |
| BstMCI | CGRYCG | 1 cut(s) | 150 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 35, 146, 275, 986 |
| BstNI | CCWGG | 2 cut(s) | 98, 1145 |
| BstSCI | CCNGG | 2 cut(s) | 96, 1143 |
| BstSLI | GKGCMC | 6 cut(s) | 15, 161, 183, 201, 443, 758 |
| BstV1I | GCAGC | 5 cut(s) | 88, 152, 179, 358, 862 |
| BstZI | CGGCCG | 1 cut(s) | 147 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1068 |
| BsuRI | GGCC | 3 cut(s) | 149, 199, 217 |
| BtgI | CCRYGG | 1 cut(s) | 33 |
| BtrI | CACGTC | 2 cut(s) | 70, 590 |
| BtsCI | GGATG | 6 cut(s) | 541, 670, 949, 1030, 1099, 1153 |
| BtsI | GCAGTG | 1 cut(s) | 177 |
| BtsIMutI | CAGTG | 4 cut(s) | 177, 717, 758, 1166 |
| BveI | ACCTGC | 2 cut(s) | 442, 953 |
| Cac8I | GCNNGC | 2 cut(s) | 106, 960 |
| Cfr13I | GGNCC | 4 cut(s) | 94, 197, 198, 216 |
| CseI | GACGC | 1 cut(s) | 132 |
| Csp6I | GTAC | 2 cut(s) | 567, 722 |
| CviAII | CATG | 4 cut(s) | 34, 581, 815, 1228 |
| CviQI | GTAC | 2 cut(s) | 567, 722 |
| DdeI | CTNAG | 3 cut(s) | 90, 726, 1068 |
| DpnI | GATC | 3 cut(s) | 187, 738, 1201 |
| DpnII | GATC | 3 cut(s) | 185, 736, 1199 |
| DraI | TTTAAA | 2 cut(s) | 831, 837 |
| DraIII | CACNNNGTG | 1 cut(s) | 447 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 142 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 142 |
| EaeI | YGGCCR | 1 cut(s) | 147 |
| EagI | CGGCCG | 1 cut(s) | 147 |
| Eam1104I | CTCTTC | 1 cut(s) | 695 |
| EarI | CTCTTC | 1 cut(s) | 695 |
| EciI | GGCGGA | 1 cut(s) | 418 |
| EclXI | CGGCCG | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 1 cut(s) | 33 |
| Eco24I | GRGCYC | 1 cut(s) | 201 |
| Eco47I | GGWCC | 1 cut(s) | 94 |
| Eco52I | CGGCCG | 1 cut(s) | 147 |
| Eco57I | CTGAAG | 1 cut(s) | 455 |
| Eco81I | CCTNAGG | 1 cut(s) | 1068 |
| Eco88I | CYCGRG | 1 cut(s) | 570 |
| EcoO109I | RGGNCCY | 2 cut(s) | 94, 197 |
| EcoRII | CCWGG | 2 cut(s) | 96, 1143 |
| EcoT14I | CCWWGG | 1 cut(s) | 33 |
| EcoT22I | ATGCAT | 1 cut(s) | 1229 |
| EcoT38I | GRGCYC | 1 cut(s) | 201 |
| ErhI | CCWWGG | 1 cut(s) | 33 |
| FaeI | CATG | 4 cut(s) | 37, 584, 818, 1231 |
| FaqI | GGGAC | 1 cut(s) | 924 |
| FatI | CATG | 4 cut(s) | 33, 580, 814, 1227 |
| FauI | CCCGC | 1 cut(s) | 224 |
| FbaI | TGATCA | 1 cut(s) | 736 |
| FblI | GTMKAC | 1 cut(s) | 793 |
| Fnu4HI | GCNGC | 5 cut(s) | 102, 141, 168, 372, 851 |
| FokI | GGATG | 6 cut(s) | 548, 677, 956, 1017, 1106, 1160 |
| FriOI | GRGCYC | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 5 cut(s) | 102, 141, 168, 372, 851 |
| FspBI | CTAG | 5 cut(s) | 42, 266, 339, 444, 789 |
| GluI | GCNGC | 5 cut(s) | 102, 141, 168, 372, 851 |
| GsaI | CCCAGC | 1 cut(s) | 510 |
| HaeIII | GGCC | 3 cut(s) | 149, 199, 217 |
| HapII | CCGG | 1 cut(s) | 530 |
| HgaI | GACGC | 1 cut(s) | 132 |
| Hin1II | CATG | 4 cut(s) | 37, 584, 818, 1231 |
| HincII | GTYRAC | 1 cut(s) | 870 |
| HindII | GTYRAC | 1 cut(s) | 870 |
| HinfI | GANTC | 2 cut(s) | 728, 993 |
| HpaII | CCGG | 1 cut(s) | 530 |
| HphI | GGTGA | 4 cut(s) | 371, 519, 680, 977 |
| Hpy166II | GTNNAC | 5 cut(s) | 13, 125, 756, 794, 870 |
| Hpy188I | TCNGA | 3 cut(s) | 91, 351, 435 |
| Hpy188III | TCNNGA | 2 cut(s) | 1067, 1091 |
| Hpy8I | GTNNAC | 5 cut(s) | 13, 125, 756, 794, 870 |
| Hpy99I | CGWCG | 3 cut(s) | 74, 139, 148 |
| HpyAV | CCTTC | 6 cut(s) | 68, 221, 399, 430, 486, 1036 |
| HpyCH4III | ACNGT | 1 cut(s) | 721 |
| HpyCH4IV | ACGT | 4 cut(s) | 69, 589, 1107, 1194 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 35, 146, 275, 986 |
| HpyF3I | CTNAG | 3 cut(s) | 90, 726, 1068 |
| HpySE526I | ACGT | 4 cut(s) | 69, 589, 1107, 1194 |
| Hsp92II | CATG | 4 cut(s) | 37, 584, 818, 1231 |
| Ksp22I | TGATCA | 1 cut(s) | 736 |
| Kzo9I | GATC | 3 cut(s) | 185, 736, 1199 |
| LmnI | GCTCC | 1 cut(s) | 379 |
| Lsp1109I | GCAGC | 5 cut(s) | 88, 152, 179, 358, 862 |
| LweI | GCATC | 4 cut(s) | 47, 523, 1039, 1138 |
| MaeI | CTAG | 5 cut(s) | 42, 266, 339, 444, 789 |
| MaeII | ACGT | 4 cut(s) | 69, 589, 1107, 1194 |
| MaeIII | GTNAC | 2 cut(s) | 65, 303 |
| MalI | GATC | 3 cut(s) | 187, 738, 1201 |
| MbiI | CCGCTC | 1 cut(s) | 18 |
| MboI | GATC | 3 cut(s) | 185, 736, 1199 |
| MboII | GAAGA | 1 cut(s) | 712 |
| MfeI | CAATTG | 2 cut(s) | 202, 518 |
| MhlI | GDGCHC | 6 cut(s) | 15, 161, 183, 201, 443, 758 |
| MlyI | GAGTC | 2 cut(s) | 737, 987 |
| MmeI | TCCRAC | 2 cut(s) | 436, 1177 |
| Mph1103I | ATGCAT | 1 cut(s) | 1229 |
| MroXI | GAANNNNTTC | 1 cut(s) | 619 |
| MseI | TTAA | 7 cut(s) | 261, 627, 830, 836, 984, 1080, 1136 |
| MspI | CCGG | 1 cut(s) | 530 |
| MspR9I | CCNGG | 2 cut(s) | 98, 1145 |
| MunI | CAATTG | 2 cut(s) | 202, 518 |
| Mva1269I | GAATGC | 1 cut(s) | 253 |
| MvaI | CCWGG | 2 cut(s) | 98, 1145 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 35, 146, 275, 986 |
| NcoI | CCATGG | 1 cut(s) | 33 |
| NdeII | GATC | 3 cut(s) | 185, 736, 1199 |
| NlaIII | CATG | 4 cut(s) | 37, 584, 818, 1231 |
| NlaIV | GGNNCC | 4 cut(s) | 160, 180, 198, 199 |
| NmuCI | GTSAC | 1 cut(s) | 65 |
| NsiI | ATGCAT | 1 cut(s) | 1229 |
| PaeR7I | CTCGAG | 1 cut(s) | 570 |
| PaqCI | CACCTGC | 1 cut(s) | 953 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 140 |
| PctI | GAATGC | 1 cut(s) | 253 |
| PdmI | GAANNNNTTC | 1 cut(s) | 619 |
| PfoI | TCCNGGA | 1 cut(s) | 1143 |
| PkrI | GCNGC | 5 cut(s) | 103, 142, 169, 373, 852 |
| PleI | GAGTC | 2 cut(s) | 736, 987 |
| PpsI | GAGTC | 2 cut(s) | 736, 987 |
| PpuMI | RGGWCCY | 1 cut(s) | 94 |
| PshBI | ATTAAT | 1 cut(s) | 1136 |
| Psp1406I | AACGTT | 1 cut(s) | 1194 |
| Psp5II | RGGWCCY | 1 cut(s) | 94 |
| Psp6I | CCWGG | 2 cut(s) | 96, 1143 |
| PspFI | CCCAGC | 1 cut(s) | 506 |
| PspGI | CCWGG | 2 cut(s) | 96, 1143 |
| PspN4I | GGNNCC | 4 cut(s) | 160, 180, 198, 199 |
| PspOMI | GGGCCC | 1 cut(s) | 197 |
| PspPI | GGNCC | 4 cut(s) | 94, 197, 198, 216 |
| PspPPI | RGGWCCY | 1 cut(s) | 94 |
| PspXI | VCTCGAGB | 1 cut(s) | 570 |
| RsaI | GTAC | 2 cut(s) | 568, 723 |
| RsaNI | GTAC | 2 cut(s) | 567, 722 |
| SaqAI | TTAA | 7 cut(s) | 261, 627, 830, 836, 984, 1080, 1136 |
| SatI | GCNGC | 5 cut(s) | 102, 141, 168, 372, 851 |
| Sau3AI | GATC | 3 cut(s) | 185, 736, 1199 |
| Sau96I | GGNCC | 4 cut(s) | 94, 197, 198, 216 |
| ScaI | AGTACT | 1 cut(s) | 568 |
| SchI | GAGTC | 2 cut(s) | 737, 987 |
| ScrFI | CCNGG | 2 cut(s) | 98, 1145 |
| SduI | GDGCHC | 6 cut(s) | 15, 161, 183, 201, 443, 758 |
| SfaNI | GCATC | 4 cut(s) | 47, 523, 1039, 1138 |
| Sfr274I | CTCGAG | 1 cut(s) | 570 |
| SinI | GGWCC | 1 cut(s) | 94 |
| SlaI | CTCGAG | 1 cut(s) | 570 |
| SmlI | CTYRAG | 1 cut(s) | 570 |
| SmoI | CTYRAG | 1 cut(s) | 570 |
| SsiI | CCGC | 4 cut(s) | 16, 50, 231, 403 |
| SspMI | CTAG | 5 cut(s) | 42, 266, 339, 444, 789 |
| StyD4I | CCNGG | 2 cut(s) | 96, 1143 |
| StyI | CCWWGG | 1 cut(s) | 33 |
| TaaI | ACNGT | 1 cut(s) | 721 |
| TaiI | ACGT | 4 cut(s) | 72, 592, 1110, 1197 |
| TaqI | TCGA | 3 cut(s) | 72, 571, 653 |
| TatI | WGTACW | 1 cut(s) | 566 |
| Tru1I | TTAA | 7 cut(s) | 261, 627, 830, 836, 984, 1080, 1136 |
| Tru9I | TTAA | 7 cut(s) | 261, 627, 830, 836, 984, 1080, 1136 |
| TscAI | CASTG | 4 cut(s) | 177, 724, 758, 1166 |
| TseFI | GTSAC | 1 cut(s) | 65 |
| TseI | GCWGC | 5 cut(s) | 101, 140, 167, 371, 850 |
| Tsp45I | GTSAC | 1 cut(s) | 65 |
| TspDTI | ATGAA | 5 cut(s) | 473, 516, 531, 681, 831 |
| TspGWI | ACGGA | 1 cut(s) | 1220 |
| TspRI | CASTG | 4 cut(s) | 177, 724, 758, 1166 |
| VneI | GTGCAC | 2 cut(s) | 11, 754 |
| VpaK11BI | GGWCC | 1 cut(s) | 94 |
| VspI | ATTAAT | 1 cut(s) | 1136 |
| XapI | RAATTY | 3 cut(s) | 617, 832, 936 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1151 |
| XhoI | CTCGAG | 1 cut(s) | 570 |
| XmiI | GTMKAC | 1 cut(s) | 793 |
| XmnI | GAANNNNTTC | 1 cut(s) | 619 |
| XspI | CTAG | 5 cut(s) | 42, 266, 339, 444, 789 |
| ZrmI | AGTACT | 1 cut(s) | 568 |
| Zsp2I | ATGCAT | 1 cut(s) | 1229 |