zinc-binding in reverse transcriptase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FAM192A_Fyv6_N | PF10187 | 17 - 101 | 1e-16 | FAM192A/Fyv6, N-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 418 |
| Acc36I | ACCTGC | 2 cut(s) | 256, 418 |
| AccII | CGCG | 1 cut(s) | 25 |
| AciI | CCGC | 5 cut(s) | 23, 25, 161, 191, 311 |
| AcsI | RAATTY | 1 cut(s) | 34 |
| AcuI | CTGAAG | 1 cut(s) | 27 |
| AfaI | GTAC | 1 cut(s) | 336 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 399 |
| AgsI | TTSAA | 5 cut(s) | 136, 169, 181, 246, 485 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 149, 181 |
| AluBI | AGCT | 3 cut(s) | 200, 461, 491 |
| AluI | AGCT | 3 cut(s) | 200, 461, 491 |
| Alw26I | GTCTC | 2 cut(s) | 209, 233 |
| Ama87I | CYCGRG | 1 cut(s) | 75 |
| AoxI | GGCC | 1 cut(s) | 282 |
| ApeKI | GCWGC | 3 cut(s) | 308, 317, 379 |
| ApoI | RAATTY | 1 cut(s) | 34 |
| AspS9I | GGNCC | 1 cut(s) | 283 |
| AsuC2I | CCSGG | 4 cut(s) | 76, 77, 110, 394 |
| AsuHPI | GGTGA | 1 cut(s) | 92 |
| AvaI | CYCGRG | 1 cut(s) | 75 |
| AxyI | CCTNAGG | 1 cut(s) | 555 |
| BbvI | GCAGC | 3 cut(s) | 320, 329, 391 |
| BccI | CCATC | 1 cut(s) | 89 |
| BceAI | ACGGC | 1 cut(s) | 278 |
| BclI | TGATCA | 2 cut(s) | 229, 469 |
| BcnI | CCSGG | 4 cut(s) | 76, 77, 110, 394 |
| BcoDI | GTCTC | 2 cut(s) | 209, 233 |
| BfaI | CTAG | 2 cut(s) | 327, 631 |
| BfuAI | ACCTGC | 2 cut(s) | 256, 418 |
| BisI | GCNGC | 4 cut(s) | 26, 309, 318, 380 |
| BlsI | GCNGC | 4 cut(s) | 27, 310, 319, 381 |
| Bme1390I | CCNGG | 4 cut(s) | 76, 77, 110, 394 |
| BmeT110I | CYCGRG | 1 cut(s) | 75 |
| BmgT120I | GGNCC | 1 cut(s) | 283 |
| BmrFI | CCNGG | 4 cut(s) | 76, 77, 110, 394 |
| BmsI | GCATC | 1 cut(s) | 148 |
| BpuMI | CCSGG | 4 cut(s) | 76, 77, 110, 394 |
| BsaJI | CCNNGG | 3 cut(s) | 23, 75, 76 |
| BsaWI | WCCGGW | 1 cut(s) | 364 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 399 |
| Bse1I | ACTGG | 1 cut(s) | 598 |
| Bse21I | CCTNAGG | 1 cut(s) | 555 |
| BseDI | CCNNGG | 3 cut(s) | 23, 75, 76 |
| BseGI | GGATG | 2 cut(s) | 100, 163 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 399 |
| BseMII | CTCAG | 2 cut(s) | 36, 546 |
| BseNI | ACTGG | 1 cut(s) | 598 |
| BseRI | GAGGAG | 1 cut(s) | 293 |
| BseXI | GCAGC | 3 cut(s) | 320, 329, 391 |
| Bsh1236I | CGCG | 1 cut(s) | 25 |
| BshFI | GGCC | 1 cut(s) | 284 |
| BsiHKCI | CYCGRG | 1 cut(s) | 75 |
| BsiSI | CCGG | 4 cut(s) | 76, 109, 365, 393 |
| BslFI | GGGAC | 1 cut(s) | 125 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 399 |
| BsmAI | GTCTC | 2 cut(s) | 209, 233 |
| BsmBI | CGTCTC | 1 cut(s) | 209 |
| BsmFI | GGGAC | 1 cut(s) | 125 |
| BsnI | GGCC | 1 cut(s) | 284 |
| BsoBI | CYCGRG | 1 cut(s) | 75 |
| Bsp1407I | TGTACA | 1 cut(s) | 334 |
| Bsp143I | GATC | 2 cut(s) | 229, 469 |
| BspACI | CCGC | 5 cut(s) | 23, 25, 161, 191, 311 |
| BspANI | GGCC | 1 cut(s) | 284 |
| BspCNI | CTCAG | 2 cut(s) | 37, 547 |
| BspFNI | CGCG | 1 cut(s) | 25 |
| BspHI | TCATGA | 1 cut(s) | 30 |
| BspMI | ACCTGC | 2 cut(s) | 256, 418 |
| BsrGI | TGTACA | 1 cut(s) | 334 |
| BsrI | ACTGG | 1 cut(s) | 598 |
| BssECI | CCNNGG | 3 cut(s) | 23, 75, 76 |
| BssMI | GATC | 2 cut(s) | 229, 469 |
| Bst4CI | ACNGT | 2 cut(s) | 54, 611 |
| Bst6I | CTCTTC | 1 cut(s) | 392 |
| BstAUI | TGTACA | 1 cut(s) | 334 |
| BstC8I | GCNNGC | 1 cut(s) | 23 |
| BstDEI | CTNAG | 3 cut(s) | 45, 555, 588 |
| BstDSI | CCRYGG | 1 cut(s) | 23 |
| BstF5I | GGATG | 2 cut(s) | 100, 163 |
| BstFNI | CGCG | 1 cut(s) | 25 |
| BstKTI | GATC | 2 cut(s) | 232, 472 |
| BstMAI | GTCTC | 2 cut(s) | 209, 233 |
| BstMBI | GATC | 2 cut(s) | 229, 469 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 181, 190, 314, 317 |
| BstSCI | CCNGG | 4 cut(s) | 74, 75, 108, 392 |
| BstUI | CGCG | 1 cut(s) | 25 |
| BstV1I | GCAGC | 3 cut(s) | 320, 329, 391 |
| Bsu36I | CCTNAGG | 1 cut(s) | 555 |
| BsuRI | GGCC | 1 cut(s) | 284 |
| BtgI | CCRYGG | 1 cut(s) | 23 |
| BtsCI | GGATG | 2 cut(s) | 100, 163 |
| BtsI | GCAGTG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 2 cut(s) | 99, 616 |
| BveI | ACCTGC | 2 cut(s) | 256, 418 |
| Cac8I | GCNNGC | 1 cut(s) | 23 |
| CciI | TCATGA | 1 cut(s) | 30 |
| Cfr13I | GGNCC | 1 cut(s) | 283 |
| Cfr42I | CCGCGG | 1 cut(s) | 26 |
| Cfr9I | CCCGGG | 1 cut(s) | 75 |
| Csp6I | GTAC | 1 cut(s) | 335 |
| CviAII | CATG | 1 cut(s) | 31 |
| CviQI | GTAC | 1 cut(s) | 335 |
| DdeI | CTNAG | 3 cut(s) | 45, 555, 588 |
| DpnI | GATC | 2 cut(s) | 231, 471 |
| DpnII | GATC | 2 cut(s) | 229, 469 |
| Eam1104I | CTCTTC | 1 cut(s) | 392 |
| EarI | CTCTTC | 1 cut(s) | 392 |
| Eco57I | CTGAAG | 1 cut(s) | 27 |
| Eco81I | CCTNAGG | 1 cut(s) | 555 |
| Eco88I | CYCGRG | 1 cut(s) | 75 |
| Esp3I | CGTCTC | 1 cut(s) | 209 |
| FaeI | CATG | 1 cut(s) | 34 |
| FaiI | YATR | 5 cut(s) | 32, 258, 428, 516, 607 |
| FaqI | GGGAC | 1 cut(s) | 125 |
| FatI | CATG | 1 cut(s) | 30 |
| FauI | CCCGC | 1 cut(s) | 30 |
| FbaI | TGATCA | 2 cut(s) | 229, 469 |
| Fnu4HI | GCNGC | 4 cut(s) | 26, 309, 318, 380 |
| FokI | GGATG | 2 cut(s) | 107, 170 |
| Fsp4HI | GCNGC | 4 cut(s) | 26, 309, 318, 380 |
| FspBI | CTAG | 2 cut(s) | 327, 631 |
| GluI | GCNGC | 4 cut(s) | 26, 309, 318, 380 |
| HaeIII | GGCC | 1 cut(s) | 284 |
| HapII | CCGG | 4 cut(s) | 76, 109, 365, 393 |
| Hin1II | CATG | 1 cut(s) | 34 |
| HincII | GTYRAC | 1 cut(s) | 345 |
| HindII | GTYRAC | 1 cut(s) | 345 |
| HindIII | AAGCTT | 1 cut(s) | 198 |
| HinfI | GANTC | 2 cut(s) | 87, 403 |
| HpaII | CCGG | 4 cut(s) | 76, 109, 365, 393 |
| HphI | GGTGA | 1 cut(s) | 92 |
| Hpy166II | GTNNAC | 3 cut(s) | 83, 345, 544 |
| Hpy188I | TCNGA | 1 cut(s) | 46 |
| Hpy188III | TCNNGA | 3 cut(s) | 31, 127, 227 |
| Hpy8I | GTNNAC | 3 cut(s) | 83, 345, 544 |
| HpyAV | CCTTC | 3 cut(s) | 148, 244, 366 |
| HpyCH4III | ACNGT | 2 cut(s) | 54, 611 |
| HpyCH4V | TGCA | 1 cut(s) | 272 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 181, 190, 314, 317 |
| HpyF3I | CTNAG | 3 cut(s) | 45, 555, 588 |
| Hsp92II | CATG | 1 cut(s) | 34 |
| Ksp22I | TGATCA | 2 cut(s) | 229, 469 |
| KspI | CCGCGG | 1 cut(s) | 26 |
| Kzo9I | GATC | 2 cut(s) | 229, 469 |
| LmnI | GCTCC | 1 cut(s) | 376 |
| Lsp1109I | GCAGC | 3 cut(s) | 320, 329, 391 |
| LweI | GCATC | 1 cut(s) | 148 |
| MaeI | CTAG | 2 cut(s) | 327, 631 |
| MalI | GATC | 2 cut(s) | 231, 471 |
| MboI | GATC | 2 cut(s) | 229, 469 |
| MboII | GAAGA | 4 cut(s) | 20, 409, 466, 497 |
| MluCI | AATT | 2 cut(s) | 34, 465 |
| MlyI | GAGTC | 1 cut(s) | 96 |
| MnlI | CCTC | 7 cut(s) | 40, 85, 271, 274, 393, 532, 550 |
| MseI | TTAA | 1 cut(s) | 435 |
| MspA1I | CMGCKG | 2 cut(s) | 25, 311 |
| MspI | CCGG | 4 cut(s) | 76, 109, 365, 393 |
| MspR9I | CCNGG | 4 cut(s) | 76, 77, 110, 394 |
| MvnI | CGCG | 1 cut(s) | 25 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 181, 190, 314, 317 |
| NciI | CCSGG | 4 cut(s) | 76, 77, 110, 394 |
| NdeII | GATC | 2 cut(s) | 229, 469 |
| NlaIII | CATG | 1 cut(s) | 34 |
| PagI | TCATGA | 1 cut(s) | 30 |
| PaqCI | CACCTGC | 1 cut(s) | 418 |
| PfeI | GAWTC | 1 cut(s) | 403 |
| PkrI | GCNGC | 4 cut(s) | 27, 310, 319, 381 |
| PleI | GAGTC | 1 cut(s) | 95 |
| PpsI | GAGTC | 1 cut(s) | 95 |
| PspPI | GGNCC | 1 cut(s) | 283 |
| RsaI | GTAC | 1 cut(s) | 336 |
| RsaNI | GTAC | 1 cut(s) | 335 |
| SacII | CCGCGG | 1 cut(s) | 26 |
| SaqAI | TTAA | 1 cut(s) | 435 |
| SatI | GCNGC | 4 cut(s) | 26, 309, 318, 380 |
| Sau3AI | GATC | 2 cut(s) | 229, 469 |
| Sau96I | GGNCC | 1 cut(s) | 283 |
| SchI | GAGTC | 1 cut(s) | 96 |
| ScrFI | CCNGG | 4 cut(s) | 76, 77, 110, 394 |
| SetI | ASST | 9 cut(s) | 202, 270, 358, 412, 427, 463, 493, 543, 556 |
| SfaNI | GCATC | 1 cut(s) | 148 |
| Sfr303I | CCGCGG | 1 cut(s) | 26 |
| SgrBI | CCGCGG | 1 cut(s) | 26 |
| SmaI | CCCGGG | 1 cut(s) | 77 |
| Sse9I | AATT | 2 cut(s) | 34, 465 |
| SsiI | CCGC | 5 cut(s) | 23, 25, 161, 191, 311 |
| SspMI | CTAG | 2 cut(s) | 327, 631 |
| StyD4I | CCNGG | 4 cut(s) | 74, 75, 108, 392 |
| TaaI | ACNGT | 2 cut(s) | 54, 611 |
| TaqI | TCGA | 2 cut(s) | 90, 126 |
| TasI | AATT | 2 cut(s) | 34, 465 |
| TatI | WGTACW | 1 cut(s) | 334 |
| TauI | GCSGC | 1 cut(s) | 28 |
| TfiI | GAWTC | 1 cut(s) | 403 |
| Tru1I | TTAA | 1 cut(s) | 435 |
| Tru9I | TTAA | 1 cut(s) | 435 |
| TscAI | CASTG | 2 cut(s) | 106, 616 |
| TseI | GCWGC | 3 cut(s) | 308, 317, 379 |
| TspDTI | ATGAA | 4 cut(s) | 47, 75, 273, 594 |
| TspGWI | ACGGA | 2 cut(s) | 233, 362 |
| TspMI | CCCGGG | 1 cut(s) | 75 |
| TspRI | CASTG | 2 cut(s) | 106, 616 |
| XapI | RAATTY | 1 cut(s) | 34 |
| XmaI | CCCGGG | 1 cut(s) | 75 |
| XspI | CTAG | 2 cut(s) | 327, 631 |