Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 112, 215 |
| AciI | CCGC | 1 cut(s) | 335 |
| AdeI | CACNNNGTG | 1 cut(s) | 215 |
| AfaI | GTAC | 2 cut(s) | 187, 329 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 112, 215 |
| AluBI | AGCT | 1 cut(s) | 166 |
| AluI | AGCT | 1 cut(s) | 166 |
| Alw26I | GTCTC | 1 cut(s) | 46 |
| AoxI | GGCC | 1 cut(s) | 51 |
| ApeKI | GCWGC | 1 cut(s) | 116 |
| AspS9I | GGNCC | 1 cut(s) | 51 |
| AsuHPI | GGTGA | 3 cut(s) | 104, 190, 298 |
| BanII | GRGCYC | 1 cut(s) | 127 |
| BbvI | GCAGC | 1 cut(s) | 103 |
| BccI | CCATC | 3 cut(s) | 62, 233, 293 |
| BcoDI | GTCTC | 1 cut(s) | 46 |
| BfaI | CTAG | 1 cut(s) | 258 |
| BisI | GCNGC | 1 cut(s) | 117 |
| BlpI | GCTNAGC | 1 cut(s) | 162 |
| BlsI | GCNGC | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 1 cut(s) | 51 |
| Bpu10I | CCTNAGC | 1 cut(s) | 319 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 162 |
| BsaI | GGTCTC | 1 cut(s) | 46 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 162, 192, 270, 300 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 112, 215 |
| BseGI | GGATG | 3 cut(s) | 10, 244, 330 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 112, 215 |
| BseRI | GAGGAG | 1 cut(s) | 125 |
| BseXI | GCAGC | 1 cut(s) | 103 |
| BshFI | GGCC | 1 cut(s) | 53 |
| BsiWI | CGTACG | 1 cut(s) | 185 |
| BslFI | GGGAC | 1 cut(s) | 305 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 112, 215 |
| BsmAI | GTCTC | 1 cut(s) | 46 |
| BsmFI | GGGAC | 1 cut(s) | 305 |
| BsnI | GGCC | 1 cut(s) | 53 |
| Bso31I | GGTCTC | 1 cut(s) | 46 |
| Bsp1286I | GDGCHC | 1 cut(s) | 127 |
| Bsp143I | GATC | 1 cut(s) | 28 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 162 |
| BspACI | CCGC | 1 cut(s) | 335 |
| BspANI | GGCC | 1 cut(s) | 53 |
| BspTNI | GGTCTC | 1 cut(s) | 46 |
| BssMI | GATC | 1 cut(s) | 28 |
| Bst4CI | ACNGT | 1 cut(s) | 266 |
| BstC8I | GCNNGC | 1 cut(s) | 159 |
| BstDEI | CTNAG | 2 cut(s) | 162, 319 |
| BstF5I | GGATG | 3 cut(s) | 10, 244, 330 |
| BstKTI | GATC | 1 cut(s) | 31 |
| BstMAI | GTCTC | 1 cut(s) | 46 |
| BstMBI | GATC | 1 cut(s) | 28 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 122, 163 |
| BstNSI | RCATGY | 2 cut(s) | 161, 341 |
| BstV1I | GCAGC | 1 cut(s) | 103 |
| BsuRI | GGCC | 1 cut(s) | 53 |
| BtsCI | GGATG | 3 cut(s) | 10, 244, 330 |
| BtsI | GCAGTG | 1 cut(s) | 311 |
| BtsIMutI | CAGTG | 2 cut(s) | 271, 311 |
| Cac8I | GCNNGC | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 1 cut(s) | 51 |
| CseI | GACGC | 1 cut(s) | 302 |
| Csp6I | GTAC | 2 cut(s) | 186, 328 |
| CviAII | CATG | 3 cut(s) | 120, 158, 338 |
| CviJI | RGCY | 6 cut(s) | 53, 116, 125, 166, 223, 323 |
| CviKI_1 | RGCY | 6 cut(s) | 53, 116, 125, 166, 223, 323 |
| CviQI | GTAC | 2 cut(s) | 186, 328 |
| DdeI | CTNAG | 2 cut(s) | 162, 319 |
| DpnI | GATC | 1 cut(s) | 30 |
| DpnII | GATC | 1 cut(s) | 28 |
| DraIII | CACNNNGTG | 1 cut(s) | 215 |
| Eco24I | GRGCYC | 1 cut(s) | 127 |
| Eco31I | GGTCTC | 1 cut(s) | 46 |
| EcoT38I | GRGCYC | 1 cut(s) | 127 |
| FaeI | CATG | 3 cut(s) | 123, 161, 341 |
| FaiI | YATR | 7 cut(s) | 75, 77, 102, 113, 121, 159, 339 |
| FaqI | GGGAC | 1 cut(s) | 305 |
| FatI | CATG | 3 cut(s) | 119, 157, 337 |
| FauI | CCCGC | 1 cut(s) | 342 |
| Fnu4HI | GCNGC | 1 cut(s) | 117 |
| FokI | GGATG | 3 cut(s) | 17, 251, 317 |
| FriOI | GRGCYC | 1 cut(s) | 127 |
| Fsp4HI | GCNGC | 1 cut(s) | 117 |
| FspBI | CTAG | 1 cut(s) | 258 |
| GluI | GCNGC | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 53 |
| HgaI | GACGC | 1 cut(s) | 302 |
| Hin1II | CATG | 3 cut(s) | 123, 161, 341 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HinfI | GANTC | 2 cut(s) | 14, 70 |
| HphI | GGTGA | 3 cut(s) | 104, 190, 298 |
| Hpy188I | TCNGA | 1 cut(s) | 142 |
| Hpy188III | TCNNGA | 1 cut(s) | 11 |
| HpyCH4III | ACNGT | 1 cut(s) | 266 |
| HpyCH4IV | ACGT | 1 cut(s) | 184 |
| HpyCH4V | TGCA | 2 cut(s) | 119, 157 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 122, 163 |
| HpyF3I | CTNAG | 2 cut(s) | 162, 319 |
| HpySE526I | ACGT | 1 cut(s) | 184 |
| Hsp92II | CATG | 3 cut(s) | 123, 161, 341 |
| Kzo9I | GATC | 1 cut(s) | 28 |
| LpnPI | CCDG | 2 cut(s) | 43, 161 |
| Lsp1109I | GCAGC | 1 cut(s) | 103 |
| MaeI | CTAG | 1 cut(s) | 258 |
| MaeII | ACGT | 1 cut(s) | 184 |
| MaeIII | GTNAC | 1 cut(s) | 260 |
| MalI | GATC | 1 cut(s) | 30 |
| MboI | GATC | 1 cut(s) | 28 |
| MhlI | GDGCHC | 1 cut(s) | 127 |
| MlyI | GAGTC | 1 cut(s) | 8 |
| MnlI | CCTC | 7 cut(s) | 146, 164, 169, 183, 213, 263, 282 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 122, 163 |
| NdeII | GATC | 1 cut(s) | 28 |
| NlaIII | CATG | 3 cut(s) | 123, 161, 341 |
| NmuCI | GTSAC | 1 cut(s) | 260 |
| NspI | RCATGY | 2 cut(s) | 161, 341 |
| PaeI | GCATGC | 1 cut(s) | 161 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| Pfl23II | CGTACG | 1 cut(s) | 185 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 112, 215 |
| PkrI | GCNGC | 1 cut(s) | 118 |
| PleI | GAGTC | 1 cut(s) | 8 |
| PpsI | GAGTC | 1 cut(s) | 8 |
| PspLI | CGTACG | 1 cut(s) | 185 |
| PspPI | GGNCC | 1 cut(s) | 51 |
| RsaI | GTAC | 2 cut(s) | 187, 329 |
| RsaNI | GTAC | 2 cut(s) | 186, 328 |
| SatI | GCNGC | 1 cut(s) | 117 |
| Sau3AI | GATC | 1 cut(s) | 28 |
| Sau96I | GGNCC | 1 cut(s) | 51 |
| SchI | GAGTC | 1 cut(s) | 8 |
| SduI | GDGCHC | 1 cut(s) | 127 |
| SetI | ASST | 4 cut(s) | 168, 180, 187, 274 |
| SphI | GCATGC | 1 cut(s) | 161 |
| SsiI | CCGC | 1 cut(s) | 335 |
| SspMI | CTAG | 1 cut(s) | 258 |
| TaaI | ACNGT | 1 cut(s) | 266 |
| TaiI | ACGT | 1 cut(s) | 187 |
| TatI | WGTACW | 1 cut(s) | 327 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| TscAI | CASTG | 2 cut(s) | 271, 311 |
| TseFI | GTSAC | 1 cut(s) | 260 |
| TseI | GCWGC | 1 cut(s) | 116 |
| Tsp45I | GTSAC | 1 cut(s) | 260 |
| TspRI | CASTG | 2 cut(s) | 271, 311 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 112, 215 |
| XceI | RCATGY | 2 cut(s) | 161, 341 |
| XspI | CTAG | 1 cut(s) | 258 |