ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 279 |
| AccB1I | GGYRCC | 1 cut(s) | 279 |
| AciI | CCGC | 2 cut(s) | 12, 269 |
| AclWI | GGATC | 3 cut(s) | 350, 466, 479 |
| AcoI | YGGCCR | 1 cut(s) | 266 |
| AcsI | RAATTY | 1 cut(s) | 159 |
| AfaI | GTAC | 2 cut(s) | 281, 436 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 100, 375, 392 |
| AgsI | TTSAA | 1 cut(s) | 80 |
| AleI | CACNNNNGTG | 1 cut(s) | 96 |
| AluBI | AGCT | 3 cut(s) | 72, 200, 314 |
| AluI | AGCT | 3 cut(s) | 72, 200, 314 |
| AlwI | GGATC | 3 cut(s) | 350, 466, 479 |
| AoxI | GGCC | 2 cut(s) | 266, 479 |
| ApoI | RAATTY | 1 cut(s) | 159 |
| Asp718I | GGTACC | 1 cut(s) | 279 |
| AspS9I | GGNCC | 2 cut(s) | 43, 480 |
| AsuHPI | GGTGA | 1 cut(s) | 452 |
| AvaII | GGWCC | 1 cut(s) | 43 |
| BamHI | GGATCC | 1 cut(s) | 471 |
| BanI | GGYRCC | 1 cut(s) | 279 |
| BccI | CCATC | 2 cut(s) | 197, 505 |
| BglII | AGATCT | 1 cut(s) | 541 |
| BisI | GCNGC | 2 cut(s) | 12, 269 |
| BlsI | GCNGC | 2 cut(s) | 13, 270 |
| Bme18I | GGWCC | 1 cut(s) | 43 |
| BmgT120I | GGNCC | 2 cut(s) | 43, 480 |
| BmiI | GGNNCC | 3 cut(s) | 281, 473, 482 |
| BmsI | GCATC | 1 cut(s) | 96 |
| BsaBI | GATNNNNATC | 1 cut(s) | 237 |
| BsaJI | CCNNGG | 3 cut(s) | 359, 467, 476 |
| BsaWI | WCCGGW | 1 cut(s) | 276 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 116, 146 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 100, 375, 392 |
| Bse1I | ACTGG | 1 cut(s) | 46 |
| Bse8I | GATNNNNATC | 1 cut(s) | 237 |
| BseDI | CCNNGG | 3 cut(s) | 359, 467, 476 |
| BseJI | GATNNNNATC | 1 cut(s) | 237 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 100, 375, 392 |
| BseNI | ACTGG | 1 cut(s) | 46 |
| BseRI | GAGGAG | 1 cut(s) | 116 |
| BshFI | GGCC | 2 cut(s) | 268, 481 |
| BshNI | GGYRCC | 1 cut(s) | 279 |
| BsiSI | CCGG | 1 cut(s) | 277 |
| BslFI | GGGAC | 1 cut(s) | 377 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 100, 375, 392 |
| BsmFI | GGGAC | 1 cut(s) | 377 |
| BsmI | GAATGC | 1 cut(s) | 189 |
| BsnI | GGCC | 2 cut(s) | 268, 481 |
| Bsp143I | GATC | 3 cut(s) | 355, 471, 541 |
| BspACI | CCGC | 2 cut(s) | 12, 269 |
| BspANI | GGCC | 2 cut(s) | 268, 481 |
| BspHI | TCATGA | 1 cut(s) | 66 |
| BspLI | GGNNCC | 3 cut(s) | 281, 473, 482 |
| BspPI | GGATC | 3 cut(s) | 350, 466, 479 |
| BspT107I | GGYRCC | 1 cut(s) | 279 |
| BsrI | ACTGG | 1 cut(s) | 46 |
| BssECI | CCNNGG | 3 cut(s) | 359, 467, 476 |
| BssMI | GATC | 3 cut(s) | 355, 471, 541 |
| BssT1I | CCWWGG | 3 cut(s) | 359, 467, 476 |
| Bst4CI | ACNGT | 1 cut(s) | 352 |
| BstDEI | CTNAG | 1 cut(s) | 520 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 98 |
| BstKTI | GATC | 3 cut(s) | 358, 474, 544 |
| BstMBI | GATC | 3 cut(s) | 355, 471, 541 |
| BstNSI | RCATGY | 1 cut(s) | 347 |
| BstX2I | RGATCY | 2 cut(s) | 471, 541 |
| BstYI | RGATCY | 2 cut(s) | 471, 541 |
| BsuRI | GGCC | 2 cut(s) | 268, 481 |
| BtsIMutI | CAGTG | 1 cut(s) | 45 |
| CciI | TCATGA | 1 cut(s) | 66 |
| Cfr13I | GGNCC | 2 cut(s) | 43, 480 |
| Csp6I | GTAC | 2 cut(s) | 280, 435 |
| CviAII | CATG | 4 cut(s) | 67, 226, 242, 344 |
| CviJI | RGCY | 8 cut(s) | 72, 173, 200, 268, 314, 460, 481, 519 |
| CviKI_1 | RGCY | 8 cut(s) | 72, 173, 200, 268, 314, 460, 481, 519 |
| CviQI | GTAC | 2 cut(s) | 280, 435 |
| DdeI | CTNAG | 1 cut(s) | 520 |
| DpnI | GATC | 3 cut(s) | 357, 473, 543 |
| DpnII | GATC | 3 cut(s) | 355, 471, 541 |
| DraI | TTTAAA | 1 cut(s) | 493 |
| EaeI | YGGCCR | 1 cut(s) | 266 |
| Eco130I | CCWWGG | 3 cut(s) | 359, 467, 476 |
| Eco47I | GGWCC | 1 cut(s) | 43 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 98 |
| EcoO109I | RGGNCCY | 1 cut(s) | 480 |
| EcoT14I | CCWWGG | 3 cut(s) | 359, 467, 476 |
| EcoT22I | ATGCAT | 2 cut(s) | 111, 191 |
| ErhI | CCWWGG | 3 cut(s) | 359, 467, 476 |
| FaeI | CATG | 4 cut(s) | 70, 229, 245, 347 |
| FaqI | GGGAC | 1 cut(s) | 377 |
| FatI | CATG | 4 cut(s) | 66, 225, 241, 343 |
| Fnu4HI | GCNGC | 2 cut(s) | 12, 269 |
| Fsp4HI | GCNGC | 2 cut(s) | 12, 269 |
| GluI | GCNGC | 2 cut(s) | 12, 269 |
| HaeIII | GGCC | 2 cut(s) | 268, 481 |
| HapII | CCGG | 1 cut(s) | 277 |
| Hin1II | CATG | 4 cut(s) | 70, 229, 245, 347 |
| HinfI | GANTC | 2 cut(s) | 287, 365 |
| HpaII | CCGG | 1 cut(s) | 277 |
| HphI | GGTGA | 1 cut(s) | 452 |
| Hpy188I | TCNGA | 2 cut(s) | 222, 334 |
| Hpy188III | TCNNGA | 1 cut(s) | 67 |
| HpyAV | CCTTC | 1 cut(s) | 509 |
| HpyCH4III | ACNGT | 1 cut(s) | 352 |
| HpyCH4V | TGCA | 3 cut(s) | 109, 189, 347 |
| HpyF3I | CTNAG | 1 cut(s) | 520 |
| Hsp92II | CATG | 4 cut(s) | 70, 229, 245, 347 |
| KpnI | GGTACC | 1 cut(s) | 283 |
| Kzo9I | GATC | 3 cut(s) | 355, 471, 541 |
| LpnPI | CCDG | 7 cut(s) | 59, 290, 297, 413, 423, 482, 519 |
| LweI | GCATC | 1 cut(s) | 96 |
| MaeIII | GTNAC | 3 cut(s) | 440, 499, 535 |
| MalI | GATC | 3 cut(s) | 357, 473, 543 |
| MboI | GATC | 3 cut(s) | 355, 471, 541 |
| MflI | RGATCY | 2 cut(s) | 471, 541 |
| MluCI | AATT | 3 cut(s) | 80, 159, 387 |
| MlyI | GAGTC | 1 cut(s) | 359 |
| MmeI | TCCRAC | 1 cut(s) | 357 |
| MnlI | CCTC | 3 cut(s) | 16, 94, 200 |
| Mph1103I | ATGCAT | 2 cut(s) | 111, 191 |
| MseI | TTAA | 4 cut(s) | 237, 390, 492, 531 |
| MslI | CAYNNNNRTG | 2 cut(s) | 96, 452 |
| MspA1I | CMGCKG | 1 cut(s) | 14 |
| MspI | CCGG | 1 cut(s) | 277 |
| Mva1269I | GAATGC | 1 cut(s) | 189 |
| NdeII | GATC | 3 cut(s) | 355, 471, 541 |
| NlaIII | CATG | 4 cut(s) | 70, 229, 245, 347 |
| NlaIV | GGNNCC | 3 cut(s) | 281, 473, 482 |
| NmuCI | GTSAC | 1 cut(s) | 440 |
| NsiI | ATGCAT | 2 cut(s) | 111, 191 |
| NspI | RCATGY | 1 cut(s) | 347 |
| OliI | CACNNNNGTG | 1 cut(s) | 96 |
| PagI | TCATGA | 1 cut(s) | 66 |
| PctI | GAATGC | 1 cut(s) | 189 |
| PfeI | GAWTC | 1 cut(s) | 287 |
| PkrI | GCNGC | 2 cut(s) | 13, 270 |
| PleI | GAGTC | 1 cut(s) | 359 |
| PpsI | GAGTC | 1 cut(s) | 359 |
| PspN4I | GGNNCC | 3 cut(s) | 281, 473, 482 |
| PspPI | GGNCC | 2 cut(s) | 43, 480 |
| PsuI | RGATCY | 2 cut(s) | 471, 541 |
| RsaI | GTAC | 2 cut(s) | 281, 436 |
| RsaNI | GTAC | 2 cut(s) | 280, 435 |
| RseI | CAYNNNNRTG | 2 cut(s) | 96, 452 |
| SaqAI | TTAA | 4 cut(s) | 237, 390, 492, 531 |
| SatI | GCNGC | 2 cut(s) | 12, 269 |
| Sau3AI | GATC | 3 cut(s) | 355, 471, 541 |
| Sau96I | GGNCC | 2 cut(s) | 43, 480 |
| SchI | GAGTC | 1 cut(s) | 359 |
| SfaNI | GCATC | 1 cut(s) | 96 |
| SinI | GGWCC | 1 cut(s) | 43 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 96, 452 |
| Sse9I | AATT | 3 cut(s) | 80, 159, 387 |
| SsiI | CCGC | 2 cut(s) | 12, 269 |
| SspI | AATATT | 1 cut(s) | 320 |
| StyI | CCWWGG | 3 cut(s) | 359, 467, 476 |
| TaaI | ACNGT | 1 cut(s) | 352 |
| TasI | AATT | 3 cut(s) | 80, 159, 387 |
| TauI | GCSGC | 2 cut(s) | 14, 271 |
| TfiI | GAWTC | 1 cut(s) | 287 |
| Tru1I | TTAA | 4 cut(s) | 237, 390, 492, 531 |
| Tru9I | TTAA | 4 cut(s) | 237, 390, 492, 531 |
| TscAI | CASTG | 1 cut(s) | 45 |
| TseFI | GTSAC | 1 cut(s) | 440 |
| Tsp45I | GTSAC | 1 cut(s) | 440 |
| TspDTI | ATGAA | 2 cut(s) | 152, 540 |
| TspRI | CASTG | 1 cut(s) | 45 |
| VpaK11BI | GGWCC | 1 cut(s) | 43 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 98 |
| XapI | RAATTY | 1 cut(s) | 159 |
| XceI | RCATGY | 1 cut(s) | 347 |
| Zsp2I | ATGCAT | 2 cut(s) | 111, 191 |