ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 194 |
| AatII | GACGTC | 1 cut(s) | 1898 |
| Acc36I | ACCTGC | 4 cut(s) | 194, 353, 1795, 2773 |
| Acc65I | GGTACC | 1 cut(s) | 251 |
| AccB1I | GGYRCC | 2 cut(s) | 251, 3092 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2831 |
| AccI | GTMKAC | 5 cut(s) | 749, 1210, 1898, 2519, 3336 |
| AccII | CGCG | 2 cut(s) | 2594, 3128 |
| AccIII | TCCGGA | 1 cut(s) | 3805 |
| AclI | AACGTT | 1 cut(s) | 3312 |
| AcoI | YGGCCR | 2 cut(s) | 1373, 3831 |
| AcsI | RAATTY | 5 cut(s) | 466, 1075, 1276, 2759, 3377 |
| AcuI | CTGAAG | 2 cut(s) | 1641, 3521 |
| AcyI | GRCGYC | 2 cut(s) | 1682, 1895 |
| AfaI | GTAC | 6 cut(s) | 253, 285, 505, 576, 715, 3403 |
| AflII | CTTAAG | 2 cut(s) | 55, 3193 |
| AflIII | ACRYGT | 2 cut(s) | 1552, 2592 |
| AgeI | ACCGGT | 2 cut(s) | 3826, 3854 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1591 |
| AhlI | ACTAGT | 2 cut(s) | 3434, 3880 |
| AjnI | CCWGG | 5 cut(s) | 426, 458, 1195, 2556, 3095 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1640, 1672, 2922, 2954 |
| AleI | CACNNNNGTG | 2 cut(s) | 3014, 3410 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 422, 454, 2750, 2782 |
| Alw21I | GWGCWC | 2 cut(s) | 1138, 1168 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 811, 3499 |
| Aor13HI | TCCGGA | 1 cut(s) | 3805 |
| AoxI | GGCC | 9 cut(s) | 793, 1047, 1199, 1373, 1497, 1632, 3022, 3189, 3831 |
| ApeKI | GCWGC | 6 cut(s) | 1940, 2710, 2720, 3057, 3087, 3254 |
| ApoI | RAATTY | 5 cut(s) | 466, 1075, 1276, 2759, 3377 |
| AseI | ATTAAT | 2 cut(s) | 2193, 3552 |
| AsiGI | ACCGGT | 2 cut(s) | 3826, 3854 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2743 |
| Asp718I | GGTACC | 1 cut(s) | 251 |
| AspA2I | CCTAGG | 1 cut(s) | 433 |
| AspLEI | GCGC | 2 cut(s) | 3128, 3254 |
| AsuC2I | CCSGG | 4 cut(s) | 821, 2906, 3486, 3629 |
| AsuHPI | GGTGA | 7 cut(s) | 302, 694, 889, 1543, 1587, 3011, 3302 |
| AsuII | TTCGAA | 2 cut(s) | 642, 2140 |
| AsuNHI | GCTAGC | 1 cut(s) | 593 |
| AvaII | GGWCC | 8 cut(s) | 365, 430, 544, 1585, 2440, 2942, 3698, 3803 |
| AvrII | CCTAGG | 1 cut(s) | 433 |
| AxyI | CCTNAGG | 1 cut(s) | 1738 |
| BaeGI | GKGCMC | 1 cut(s) | 701 |
| BamHI | GGATCC | 1 cut(s) | 756 |
| BanI | GGYRCC | 2 cut(s) | 251, 3092 |
| BanII | GRGCYC | 1 cut(s) | 1664 |
| BbsI | GAAGAC | 2 cut(s) | 1898, 2357 |
| Bbv12I | GWGCWC | 2 cut(s) | 1138, 1168 |
| BbvI | GCAGC | 6 cut(s) | 1927, 2707, 2722, 3069, 3099, 3241 |
| BceAI | ACGGC | 4 cut(s) | 1062, 1388, 3009, 3340 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1279, 1313 |
| BciT130I | CCWGG | 5 cut(s) | 428, 460, 1197, 2558, 3097 |
| BciVI | GTATCC | 1 cut(s) | 1191 |
| BclI | TGATCA | 4 cut(s) | 568, 1017, 1395, 2911 |
| BcnI | CCSGG | 4 cut(s) | 821, 2906, 3486, 3629 |
| BcuI | ACTAGT | 2 cut(s) | 3434, 3880 |
| BfmI | CTRYAG | 3 cut(s) | 28, 159, 242 |
| BfoI | RGCGCY | 1 cut(s) | 3255 |
| BfrI | CTTAAG | 2 cut(s) | 55, 3193 |
| BfuAI | ACCTGC | 4 cut(s) | 194, 353, 1795, 2773 |
| BfuI | GTATCC | 1 cut(s) | 1191 |
| BglII | AGATCT | 1 cut(s) | 3718 |
| BlnI | CCTAGG | 1 cut(s) | 433 |
| BlpI | GCTNAGC | 1 cut(s) | 17 |
| Bme1390I | CCNGG | 9 cut(s) | 428, 460, 821, 1197, 2558, 2906, 3097, 3486, 3629 |
| Bme18I | GGWCC | 8 cut(s) | 365, 430, 544, 1585, 2440, 2942, 3698, 3803 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1591 |
| BmiI | GGNNCC | 9 cut(s) | 253, 656, 758, 1586, 1587, 2442, 2768, 2944, 3094 |
| BmrFI | CCNGG | 9 cut(s) | 428, 460, 821, 1197, 2558, 2906, 3097, 3486, 3629 |
| BmrI | ACTGGG | 1 cut(s) | 296 |
| BmsI | GCATC | 8 cut(s) | 37, 265, 378, 679, 798, 1078, 1255, 2953 |
| BmtI | GCTAGC | 1 cut(s) | 597 |
| BmuI | ACTGGG | 1 cut(s) | 296 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3112 |
| BpiI | GAAGAC | 2 cut(s) | 1898, 2357 |
| BpmI | CTGGAG | 1 cut(s) | 1268 |
| Bpu10I | CCTNAGC | 2 cut(s) | 537, 1301 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 17 |
| Bpu14I | TTCGAA | 2 cut(s) | 642, 2140 |
| BpuEI | CTTGAG | 1 cut(s) | 3506 |
| BpuMI | CCSGG | 4 cut(s) | 821, 2906, 3486, 3629 |
| BsaAI | YACGTR | 1 cut(s) | 152 |
| BsaBI | GATNNNNATC | 4 cut(s) | 9, 567, 2268, 3717 |
| BsaHI | GRCGYC | 2 cut(s) | 1682, 1895 |
| BsaI | GGTCTC | 4 cut(s) | 1349, 3100, 3544, 3773 |
| BsaWI | WCCGGW | 6 cut(s) | 1158, 3794, 3805, 3826, 3854, 3887 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2639, 2669 |
| Bse118I | RCCGGY | 3 cut(s) | 2321, 3826, 3854 |
| Bse1I | ACTGG | 7 cut(s) | 291, 1027, 2035, 2112, 3209, 3253, 3866 |
| Bse21I | CCTNAGG | 1 cut(s) | 1738 |
| Bse3DI | GCAATG | 2 cut(s) | 2973, 3540 |
| Bse8I | GATNNNNATC | 4 cut(s) | 9, 567, 2268, 3717 |
| BseAI | TCCGGA | 1 cut(s) | 3805 |
| BseBI | CCWGG | 5 cut(s) | 428, 460, 1197, 2558, 3097 |
| BseJI | GATNNNNATC | 4 cut(s) | 9, 567, 2268, 3717 |
| BseMI | GCAATG | 2 cut(s) | 2973, 3540 |
| BseMII | CTCAG | 7 cut(s) | 31, 107, 473, 1344, 1752, 2234, 3095 |
| BseNI | ACTGG | 7 cut(s) | 291, 1027, 2035, 2112, 3209, 3253, 3866 |
| BseRI | GAGGAG | 3 cut(s) | 1079, 2228, 3181 |
| BseSI | GKGCMC | 1 cut(s) | 701 |
| BseXI | GCAGC | 6 cut(s) | 1927, 2707, 2722, 3069, 3099, 3241 |
| BseYI | CCCAGC | 4 cut(s) | 811, 841, 3019, 3440 |
| Bsh1236I | CGCG | 2 cut(s) | 2594, 3128 |
| Bsh1285I | CGRYCG | 2 cut(s) | 620, 3827 |
| BshFI | GGCC | 9 cut(s) | 795, 1049, 1201, 1375, 1499, 1634, 3024, 3191, 3833 |
| BshNI | GGYRCC | 2 cut(s) | 251, 3092 |
| BshTI | ACCGGT | 2 cut(s) | 3826, 3854 |
| BsiEI | CGRYCG | 2 cut(s) | 620, 3827 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1138, 1168 |
| BslFI | GGGAC | 8 cut(s) | 1177, 1598, 1630, 2426, 2490, 2522, 2928, 3457 |
| BsmBI | CGTCTC | 2 cut(s) | 1689, 3516 |
| BsmFI | GGGAC | 8 cut(s) | 1177, 1598, 1630, 2426, 2490, 2522, 2928, 3457 |
| BsmI | GAATGC | 2 cut(s) | 2287, 2824 |
| BsnI | GGCC | 9 cut(s) | 795, 1049, 1201, 1375, 1499, 1634, 3024, 3191, 3833 |
| Bso31I | GGTCTC | 4 cut(s) | 1349, 3100, 3544, 3773 |
| Bsp119I | TTCGAA | 2 cut(s) | 642, 2140 |
| Bsp1286I | GDGCHC | 4 cut(s) | 701, 1138, 1168, 1664 |
| Bsp13I | TCCGGA | 1 cut(s) | 3805 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 17 |
| Bsp19I | CCATGG | 1 cut(s) | 308 |
| BspANI | GGCC | 9 cut(s) | 795, 1049, 1201, 1375, 1499, 1634, 3024, 3191, 3833 |
| BspCNI | CTCAG | 7 cut(s) | 30, 106, 474, 1345, 1751, 2235, 3096 |
| BspEI | TCCGGA | 1 cut(s) | 3805 |
| BspFNI | CGCG | 2 cut(s) | 2594, 3128 |
| BspHI | TCATGA | 2 cut(s) | 1699, 1849 |
| BspLI | GGNNCC | 9 cut(s) | 253, 656, 758, 1586, 1587, 2442, 2768, 2944, 3094 |
| BspMI | ACCTGC | 4 cut(s) | 194, 353, 1795, 2773 |
| BspOI | GCTAGC | 1 cut(s) | 597 |
| BspT104I | TTCGAA | 2 cut(s) | 642, 2140 |
| BspT107I | GGYRCC | 2 cut(s) | 251, 3092 |
| BspTI | CTTAAG | 2 cut(s) | 55, 3193 |
| BspTNI | GGTCTC | 4 cut(s) | 1349, 3100, 3544, 3773 |
| BsrDI | GCAATG | 2 cut(s) | 2973, 3540 |
| BsrFI | RCCGGY | 3 cut(s) | 2321, 3826, 3854 |
| BsrI | ACTGG | 7 cut(s) | 291, 1027, 2035, 2112, 3209, 3253, 3866 |
| BssAI | RCCGGY | 3 cut(s) | 2321, 3826, 3854 |
| BssNAI | GTATAC | 3 cut(s) | 750, 1211, 2520 |
| BssNI | GRCGYC | 2 cut(s) | 1682, 1895 |
| BssT1I | CCWWGG | 4 cut(s) | 308, 433, 1948, 3144 |
| Bst1107I | GTATAC | 3 cut(s) | 750, 1211, 2520 |
| Bst2UI | CCWGG | 5 cut(s) | 428, 460, 1197, 2558, 3097 |
| Bst4CI | ACNGT | 7 cut(s) | 29, 419, 1147, 1208, 2513, 2776, 2988 |
| Bst6I | CTCTTC | 1 cut(s) | 2675 |
| BstACI | GRCGYC | 2 cut(s) | 1682, 1895 |
| BstAFI | CTTAAG | 2 cut(s) | 55, 3193 |
| BstBAI | YACGTR | 1 cut(s) | 152 |
| BstBI | TTCGAA | 2 cut(s) | 642, 2140 |
| BstC8I | GCNNGC | 7 cut(s) | 201, 595, 1938, 1945, 1972, 3085, 3130 |
| BstDSI | CCRYGG | 2 cut(s) | 308, 1546 |
| BstEII | GGTNACC | 1 cut(s) | 1342 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1566 |
| BstFNI | CGCG | 2 cut(s) | 2594, 3128 |
| BstH2I | RGCGCY | 1 cut(s) | 3255 |
| BstHHI | GCGC | 2 cut(s) | 3128, 3254 |
| BstMCI | CGRYCG | 2 cut(s) | 620, 3827 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 2092, 2386, 3132, 3428, 3437 |
| BstNI | CCWGG | 5 cut(s) | 428, 460, 1197, 2558, 3097 |
| BstNSI | RCATGY | 3 cut(s) | 593, 955, 1556 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3112 |
| BstPI | GGTNACC | 1 cut(s) | 1342 |
| BstSCI | CCNGG | 9 cut(s) | 426, 458, 819, 1195, 2556, 2904, 3095, 3484, 3627 |
| BstSFI | CTRYAG | 3 cut(s) | 28, 159, 242 |
| BstSLI | GKGCMC | 1 cut(s) | 701 |
| BstSNI | TACGTA | 1 cut(s) | 152 |
| BstUI | CGCG | 2 cut(s) | 2594, 3128 |
| BstV1I | GCAGC | 6 cut(s) | 1927, 2707, 2722, 3069, 3099, 3241 |
| BstV2I | GAAGAC | 2 cut(s) | 1898, 2357 |
| BstX2I | RGATCY | 8 cut(s) | 10, 70, 756, 1704, 2858, 3184, 3712, 3718 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1426 |
| BstYI | RGATCY | 8 cut(s) | 10, 70, 756, 1704, 2858, 3184, 3712, 3718 |
| BstZ17I | GTATAC | 3 cut(s) | 750, 1211, 2520 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1738 |
| BsuI | GTATCC | 1 cut(s) | 1191 |
| BsuRI | GGCC | 9 cut(s) | 795, 1049, 1201, 1375, 1499, 1634, 3024, 3191, 3833 |
| BtgI | CCRYGG | 2 cut(s) | 308, 1546 |
| BtsI | GCAGTG | 2 cut(s) | 189, 989 |
| BtsIMutI | CAGTG | 9 cut(s) | 189, 699, 989, 1020, 1152, 2180, 3101, 3216, 3859 |
| BveI | ACCTGC | 4 cut(s) | 194, 353, 1795, 2773 |
| Cac8I | GCNNGC | 7 cut(s) | 201, 595, 1938, 1945, 1972, 3085, 3130 |
| CaiI | CAGNNNCTG | 2 cut(s) | 811, 3499 |
| CciI | TCATGA | 2 cut(s) | 1699, 1849 |
| CfoI | GCGC | 2 cut(s) | 3128, 3254 |
| Cfr10I | RCCGGY | 3 cut(s) | 2321, 3826, 3854 |
| CpoI | CGGWCCG | 1 cut(s) | 3803 |
| CseI | GACGC | 3 cut(s) | 1671, 2600, 3267 |
| CsiI | ACCWGGT | 1 cut(s) | 458 |
| Csp6I | GTAC | 6 cut(s) | 252, 284, 504, 575, 714, 3402 |
| CspAI | ACCGGT | 2 cut(s) | 3826, 3854 |
| CspI | CGGWCCG | 1 cut(s) | 3803 |
| CviQI | GTAC | 6 cut(s) | 252, 284, 504, 575, 714, 3402 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1591 |
| EaeI | YGGCCR | 2 cut(s) | 1373, 3831 |
| Eam1104I | CTCTTC | 1 cut(s) | 2675 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1591 |
| EarI | CTCTTC | 1 cut(s) | 2675 |
| Eco105I | TACGTA | 1 cut(s) | 152 |
| Eco130I | CCWWGG | 4 cut(s) | 308, 433, 1948, 3144 |
| Eco147I | AGGCCT | 1 cut(s) | 1499 |
| Eco24I | GRGCYC | 1 cut(s) | 1664 |
| Eco31I | GGTCTC | 4 cut(s) | 1349, 3100, 3544, 3773 |
| Eco32I | GATATC | 1 cut(s) | 523 |
| Eco47I | GGWCC | 8 cut(s) | 365, 430, 544, 1585, 2440, 2942, 3698, 3803 |
| Eco57I | CTGAAG | 2 cut(s) | 1641, 3521 |
| Eco81I | CCTNAGG | 1 cut(s) | 1738 |
| Eco91I | GGTNACC | 1 cut(s) | 1342 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1566 |
| EcoO109I | RGGNCCY | 2 cut(s) | 365, 1585 |
| EcoO65I | GGTNACC | 1 cut(s) | 1342 |
| EcoRI | GAATTC | 1 cut(s) | 466 |
| EcoRII | CCWGG | 5 cut(s) | 426, 458, 1195, 2556, 3095 |
| EcoRV | GATATC | 1 cut(s) | 523 |
| EcoT14I | CCWWGG | 4 cut(s) | 308, 433, 1948, 3144 |
| EcoT22I | ATGCAT | 1 cut(s) | 174 |
| EcoT38I | GRGCYC | 1 cut(s) | 1664 |
| ErhI | CCWWGG | 4 cut(s) | 308, 433, 1948, 3144 |
| Esp3I | CGTCTC | 2 cut(s) | 1689, 3516 |
| FaqI | GGGAC | 8 cut(s) | 1177, 1598, 1630, 2426, 2490, 2522, 2928, 3457 |
| FauI | CCCGC | 1 cut(s) | 3121 |
| FauNDI | CATATG | 2 cut(s) | 1116, 2457 |
| FbaI | TGATCA | 4 cut(s) | 568, 1017, 1395, 2911 |
| FblI | GTMKAC | 5 cut(s) | 749, 1210, 1898, 2519, 3336 |
| FriOI | GRGCYC | 1 cut(s) | 1664 |
| GlaI | GCGC | 2 cut(s) | 3127, 3253 |
| GsaI | CCCAGC | 4 cut(s) | 815, 845, 3023, 3444 |
| GsuI | CTGGAG | 1 cut(s) | 1268 |
| HaeII | RGCGCY | 1 cut(s) | 3255 |
| HaeIII | GGCC | 9 cut(s) | 795, 1049, 1201, 1375, 1499, 1634, 3024, 3191, 3833 |
| HgaI | GACGC | 3 cut(s) | 1671, 2600, 3267 |
| HhaI | GCGC | 2 cut(s) | 3128, 3254 |
| Hin1I | GRCGYC | 2 cut(s) | 1682, 1895 |
| Hin6I | GCGC | 2 cut(s) | 3126, 3252 |
| HinP1I | GCGC | 2 cut(s) | 3126, 3252 |
| HincII | GTYRAC | 2 cut(s) | 1792, 3337 |
| HindII | GTYRAC | 2 cut(s) | 1792, 3337 |
| HindIII | AAGCTT | 3 cut(s) | 405, 1692, 1934 |
| HphI | GGTGA | 7 cut(s) | 302, 694, 889, 1543, 1587, 3011, 3302 |
| Hpy99I | CGWCG | 1 cut(s) | 3341 |
| HpyCH4III | ACNGT | 7 cut(s) | 29, 419, 1147, 1208, 2513, 2776, 2988 |
| HpyCH4IV | ACGT | 6 cut(s) | 151, 785, 1895, 3113, 3312, 3339 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 2092, 2386, 3132, 3428, 3437 |
| HpySE526I | ACGT | 6 cut(s) | 151, 785, 1895, 3113, 3312, 3339 |
| Hsp92I | GRCGYC | 2 cut(s) | 1682, 1895 |
| HspAI | GCGC | 2 cut(s) | 3126, 3252 |
| KflI | GGGWCCC | 1 cut(s) | 1585 |
| Kpn2I | TCCGGA | 1 cut(s) | 3805 |
| KpnI | GGTACC | 1 cut(s) | 255 |
| Ksp22I | TGATCA | 4 cut(s) | 568, 1017, 1395, 2911 |
| LmnI | GCTCC | 5 cut(s) | 660, 1141, 2056, 2647, 2827 |
| Lsp1109I | GCAGC | 6 cut(s) | 1927, 2707, 2722, 3069, 3099, 3241 |
| LweI | GCATC | 8 cut(s) | 37, 265, 378, 679, 798, 1078, 1255, 2953 |
| MabI | ACCWGGT | 1 cut(s) | 458 |
| MaeII | ACGT | 6 cut(s) | 151, 785, 1895, 3113, 3312, 3339 |
| MaeIII | GTNAC | 9 cut(s) | 877, 1105, 1342, 1593, 2751, 3199, 3290, 3857, 3883 |
| MfeI | CAATTG | 2 cut(s) | 1377, 3408 |
| MflI | RGATCY | 8 cut(s) | 10, 70, 756, 1704, 2858, 3184, 3712, 3718 |
| MhlI | GDGCHC | 4 cut(s) | 701, 1138, 1168, 1664 |
| MluI | ACGCGT | 1 cut(s) | 2592 |
| MlyI | GAGTC | 5 cut(s) | 293, 1853, 2254, 3668, 3785 |
| MmeI | TCCRAC | 6 cut(s) | 682, 688, 1208, 2565, 3322, 3893 |
| Mph1103I | ATGCAT | 1 cut(s) | 174 |
| MroI | TCCGGA | 1 cut(s) | 3805 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2743 |
| MseI | TTAA | 9 cut(s) | 56, 636, 1761, 2193, 2577, 2642, 2865, 3194, 3552 |
| MslI | CAYNNNNRTG | 7 cut(s) | 273, 307, 993, 1119, 2460, 3014, 3410 |
| MspA1I | CMGCKG | 4 cut(s) | 21, 763, 3090, 3288 |
| MspCI | CTTAAG | 2 cut(s) | 55, 3193 |
| MspR9I | CCNGG | 9 cut(s) | 428, 460, 821, 1197, 2558, 2906, 3097, 3486, 3629 |
| MunI | CAATTG | 2 cut(s) | 1377, 3408 |
| Mva1269I | GAATGC | 2 cut(s) | 2287, 2824 |
| MvaI | CCWGG | 5 cut(s) | 428, 460, 1197, 2558, 3097 |
| MvnI | CGCG | 2 cut(s) | 2594, 3128 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 2092, 2386, 3132, 3428, 3437 |
| NciI | CCSGG | 4 cut(s) | 821, 2906, 3486, 3629 |
| NcoI | CCATGG | 1 cut(s) | 308 |
| NdeI | CATATG | 2 cut(s) | 1116, 2457 |
| NheI | GCTAGC | 1 cut(s) | 593 |
| NlaIV | GGNNCC | 9 cut(s) | 253, 656, 758, 1586, 1587, 2442, 2768, 2944, 3094 |
| NmeAIII | GCCGAG | 3 cut(s) | 1592, 1610, 2108 |
| NmuCI | GTSAC | 5 cut(s) | 877, 1593, 3290, 3857, 3883 |
| NsiI | ATGCAT | 1 cut(s) | 174 |
| NspI | RCATGY | 3 cut(s) | 593, 955, 1556 |
| NspV | TTCGAA | 2 cut(s) | 642, 2140 |
| OliI | CACNNNNGTG | 2 cut(s) | 3014, 3410 |
| PagI | TCATGA | 2 cut(s) | 1699, 1849 |
| PaqCI | CACCTGC | 1 cut(s) | 194 |
| PasI | CCCWGGG | 1 cut(s) | 1196 |
| PceI | AGGCCT | 1 cut(s) | 1499 |
| PciI | ACATGT | 1 cut(s) | 1552 |
| PctI | GAATGC | 2 cut(s) | 2287, 2824 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2743 |
| PflFI | GACNNNGTC | 2 cut(s) | 1189, 1360 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2831 |
| PfoI | TCCNGGA | 2 cut(s) | 426, 2904 |
| PinAI | ACCGGT | 2 cut(s) | 3826, 3854 |
| PleI | GAGTC | 5 cut(s) | 293, 1852, 2253, 3668, 3785 |
| PpsI | GAGTC | 5 cut(s) | 293, 1852, 2253, 3668, 3785 |
| Ppu21I | YACGTR | 1 cut(s) | 152 |
| PpuMI | RGGWCCY | 2 cut(s) | 365, 1585 |
| PscI | ACATGT | 1 cut(s) | 1552 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3112 |
| PshBI | ATTAAT | 2 cut(s) | 2193, 3552 |
| Psp1406I | AACGTT | 1 cut(s) | 3312 |
| Psp5II | RGGWCCY | 2 cut(s) | 365, 1585 |
| Psp6I | CCWGG | 5 cut(s) | 426, 458, 1195, 2556, 3095 |
| PspEI | GGTNACC | 1 cut(s) | 1342 |
| PspFI | CCCAGC | 4 cut(s) | 811, 841, 3019, 3440 |
| PspGI | CCWGG | 5 cut(s) | 426, 458, 1195, 2556, 3095 |
| PspN4I | GGNNCC | 9 cut(s) | 253, 656, 758, 1586, 1587, 2442, 2768, 2944, 3094 |
| PspPPI | RGGWCCY | 2 cut(s) | 365, 1585 |
| PstNI | CAGNNNCTG | 2 cut(s) | 811, 3499 |
| PsuI | RGATCY | 8 cut(s) | 10, 70, 756, 1704, 2858, 3184, 3712, 3718 |
| PsyI | GACNNNGTC | 2 cut(s) | 1189, 1360 |
| PvuII | CAGCTG | 2 cut(s) | 21, 763 |
| RsaI | GTAC | 6 cut(s) | 253, 285, 505, 576, 715, 3403 |
| RsaNI | GTAC | 6 cut(s) | 252, 284, 504, 575, 714, 3402 |
| RseI | CAYNNNNRTG | 7 cut(s) | 273, 307, 993, 1119, 2460, 3014, 3410 |
| Rsr2I | CGGWCCG | 1 cut(s) | 3803 |
| RsrII | CGGWCCG | 1 cut(s) | 3803 |
| SalI | GTCGAC | 1 cut(s) | 3335 |
| SaqAI | TTAA | 9 cut(s) | 56, 636, 1761, 2193, 2577, 2642, 2865, 3194, 3552 |
| SchI | GAGTC | 5 cut(s) | 293, 1853, 2254, 3668, 3785 |
| ScrFI | CCNGG | 9 cut(s) | 428, 460, 821, 1197, 2558, 2906, 3097, 3486, 3629 |
| SduI | GDGCHC | 4 cut(s) | 701, 1138, 1168, 1664 |
| SexAI | ACCWGGT | 1 cut(s) | 458 |
| SfaNI | GCATC | 8 cut(s) | 37, 265, 378, 679, 798, 1078, 1255, 2953 |
| SfcI | CTRYAG | 3 cut(s) | 28, 159, 242 |
| SfuI | TTCGAA | 2 cut(s) | 642, 2140 |
| SinI | GGWCC | 8 cut(s) | 365, 430, 544, 1585, 2440, 2942, 3698, 3803 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 273, 307, 993, 1119, 2460, 3014, 3410 |
| SmlI | CTYRAG | 3 cut(s) | 55, 3193, 3521 |
| SmoI | CTYRAG | 3 cut(s) | 55, 3193, 3521 |
| SnaBI | TACGTA | 1 cut(s) | 152 |
| SpeI | ACTAGT | 2 cut(s) | 3434, 3880 |
| SseBI | AGGCCT | 1 cut(s) | 1499 |
| SspI | AATATT | 2 cut(s) | 1859, 1983 |
| StuI | AGGCCT | 1 cut(s) | 1499 |
| StyD4I | CCNGG | 9 cut(s) | 426, 458, 819, 1195, 2556, 2904, 3095, 3484, 3627 |
| StyI | CCWWGG | 4 cut(s) | 308, 433, 1948, 3144 |
| TaaI | ACNGT | 7 cut(s) | 29, 419, 1147, 1208, 2513, 2776, 2988 |
| TaiI | ACGT | 6 cut(s) | 154, 788, 1898, 3116, 3315, 3342 |
| TaqII | GACCGA | 3 cut(s) | 391, 518, 634 |
| TatI | WGTACW | 1 cut(s) | 283 |
| TauI | GCSGC | 5 cut(s) | 614, 1682, 3135, 3273, 3309 |
| Tru1I | TTAA | 9 cut(s) | 56, 636, 1761, 2193, 2577, 2642, 2865, 3194, 3552 |
| Tru9I | TTAA | 9 cut(s) | 56, 636, 1761, 2193, 2577, 2642, 2865, 3194, 3552 |
| TscAI | CASTG | 9 cut(s) | 189, 706, 989, 1027, 1152, 2180, 3108, 3216, 3866 |
| TseFI | GTSAC | 5 cut(s) | 877, 1593, 3290, 3857, 3883 |
| TseI | GCWGC | 6 cut(s) | 1940, 2710, 2720, 3057, 3087, 3254 |
| Tsp45I | GTSAC | 5 cut(s) | 877, 1593, 3290, 3857, 3883 |
| TspGWI | ACGGA | 4 cut(s) | 944, 958, 2505, 2975 |
| TspRI | CASTG | 9 cut(s) | 189, 706, 989, 1027, 1152, 2180, 3108, 3216, 3866 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1189, 1360 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2831 |
| Vha464I | CTTAAG | 2 cut(s) | 55, 3193 |
| VpaK11BI | GGWCC | 8 cut(s) | 365, 430, 544, 1585, 2440, 2942, 3698, 3803 |
| VspI | ATTAAT | 2 cut(s) | 2193, 3552 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1566 |
| XapI | RAATTY | 5 cut(s) | 466, 1075, 1276, 2759, 3377 |
| XbaI | TCTAGA | 1 cut(s) | 3715 |
| XceI | RCATGY | 3 cut(s) | 593, 955, 1556 |
| XmaJI | CCTAGG | 1 cut(s) | 433 |
| XmiI | GTMKAC | 5 cut(s) | 749, 1210, 1898, 2519, 3336 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2743 |
| ZraI | GACGTC | 1 cut(s) | 1896 |
| Zsp2I | ATGCAT | 1 cut(s) | 174 |