Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 82 |
| AccIII | TCCGGA | 1 cut(s) | 336 |
| AciI | CCGC | 2 cut(s) | 82, 385 |
| AcsI | RAATTY | 2 cut(s) | 208, 350 |
| AfaI | GTAC | 2 cut(s) | 259, 409 |
| AgsI | TTSAA | 1 cut(s) | 197 |
| AluBI | AGCT | 6 cut(s) | 59, 89, 167, 342, 380, 415 |
| AluI | AGCT | 6 cut(s) | 59, 89, 167, 342, 380, 415 |
| Aor13HI | TCCGGA | 1 cut(s) | 336 |
| ApoI | RAATTY | 2 cut(s) | 208, 350 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 10, 43, 380, 413 |
| BbsI | GAAGAC | 1 cut(s) | 20 |
| BciVI | GTATCC | 1 cut(s) | 381 |
| BclI | TGATCA | 1 cut(s) | 147 |
| BfaI | CTAG | 2 cut(s) | 240, 416 |
| BfuI | GTATCC | 1 cut(s) | 381 |
| BglII | AGATCT | 1 cut(s) | 220 |
| BlpI | GCTNAGC | 1 cut(s) | 372 |
| BpiI | GAAGAC | 1 cut(s) | 20 |
| BpmI | CTGGAG | 1 cut(s) | 119 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 372 |
| BpuEI | CTTGAG | 2 cut(s) | 147, 245 |
| BsaJI | CCNNGG | 1 cut(s) | 312 |
| BsaWI | WCCGGW | 1 cut(s) | 336 |
| Bse1I | ACTGG | 1 cut(s) | 102 |
| BseAI | TCCGGA | 1 cut(s) | 336 |
| BseDI | CCNNGG | 1 cut(s) | 312 |
| BseGI | GGATG | 1 cut(s) | 301 |
| BseNI | ACTGG | 1 cut(s) | 102 |
| BsiSI | CCGG | 1 cut(s) | 337 |
| BsmI | GAATGC | 1 cut(s) | 450 |
| Bsp13I | TCCGGA | 1 cut(s) | 336 |
| Bsp1407I | TGTACA | 1 cut(s) | 407 |
| Bsp143I | GATC | 2 cut(s) | 147, 220 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 372 |
| BspACI | CCGC | 2 cut(s) | 82, 385 |
| BspEI | TCCGGA | 1 cut(s) | 336 |
| BsrBI | CCGCTC | 1 cut(s) | 82 |
| BsrGI | TGTACA | 1 cut(s) | 407 |
| BsrI | ACTGG | 1 cut(s) | 102 |
| BssECI | CCNNGG | 1 cut(s) | 312 |
| BssMI | GATC | 2 cut(s) | 147, 220 |
| BssT1I | CCWWGG | 1 cut(s) | 312 |
| Bst6I | CTCTTC | 1 cut(s) | 312 |
| BstAUI | TGTACA | 1 cut(s) | 407 |
| BstC8I | GCNNGC | 1 cut(s) | 378 |
| BstDEI | CTNAG | 2 cut(s) | 22, 372 |
| BstF5I | GGATG | 1 cut(s) | 301 |
| BstKTI | GATC | 2 cut(s) | 150, 223 |
| BstMBI | GATC | 2 cut(s) | 147, 220 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 377, 382 |
| BstNSI | RCATGY | 1 cut(s) | 460 |
| BstV2I | GAAGAC | 1 cut(s) | 20 |
| BstX2I | RGATCY | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 220 |
| BsuI | GTATCC | 1 cut(s) | 381 |
| BtsCI | GGATG | 1 cut(s) | 301 |
| Cac8I | GCNNGC | 1 cut(s) | 378 |
| Csp6I | GTAC | 2 cut(s) | 258, 408 |
| CviAII | CATG | 3 cut(s) | 11, 308, 457 |
| CviJI | RGCY | 9 cut(s) | 59, 89, 161, 167, 327, 342, 371, 380, 415 |
| CviKI_1 | RGCY | 9 cut(s) | 59, 89, 161, 167, 327, 342, 371, 380, 415 |
| CviQI | GTAC | 2 cut(s) | 258, 408 |
| DdeI | CTNAG | 2 cut(s) | 22, 372 |
| DpnI | GATC | 2 cut(s) | 149, 222 |
| DpnII | GATC | 2 cut(s) | 147, 220 |
| Eam1104I | CTCTTC | 1 cut(s) | 312 |
| EarI | CTCTTC | 1 cut(s) | 312 |
| EciI | GGCGGA | 1 cut(s) | 400 |
| Eco130I | CCWWGG | 1 cut(s) | 312 |
| EcoT14I | CCWWGG | 1 cut(s) | 312 |
| ErhI | CCWWGG | 1 cut(s) | 312 |
| FaeI | CATG | 3 cut(s) | 14, 311, 460 |
| FaiI | YATR | 8 cut(s) | 12, 41, 72, 74, 180, 185, 309, 458 |
| FatI | CATG | 3 cut(s) | 10, 307, 456 |
| FbaI | TGATCA | 1 cut(s) | 147 |
| FokI | GGATG | 1 cut(s) | 308 |
| FspBI | CTAG | 2 cut(s) | 240, 416 |
| GsuI | CTGGAG | 1 cut(s) | 119 |
| HapII | CCGG | 1 cut(s) | 337 |
| Hin1II | CATG | 3 cut(s) | 14, 311, 460 |
| HindIII | AAGCTT | 1 cut(s) | 378 |
| HinfI | GANTC | 1 cut(s) | 5 |
| HpaII | CCGG | 1 cut(s) | 337 |
| Hpy188I | TCNGA | 1 cut(s) | 349 |
| Hpy188III | TCNNGA | 2 cut(s) | 224, 337 |
| HpyAV | CCTTC | 1 cut(s) | 73 |
| HpyCH4IV | ACGT | 1 cut(s) | 271 |
| HpyCH4V | TGCA | 1 cut(s) | 448 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 377, 382 |
| HpyF3I | CTNAG | 2 cut(s) | 22, 372 |
| HpySE526I | ACGT | 1 cut(s) | 271 |
| Hsp92II | CATG | 3 cut(s) | 14, 311, 460 |
| Kpn2I | TCCGGA | 1 cut(s) | 336 |
| Ksp22I | TGATCA | 1 cut(s) | 147 |
| Kzo9I | GATC | 2 cut(s) | 147, 220 |
| LmnI | GCTCC | 3 cut(s) | 79, 100, 339 |
| LpnPI | CCDG | 4 cut(s) | 83, 117, 136, 350 |
| MaeI | CTAG | 2 cut(s) | 240, 416 |
| MaeII | ACGT | 1 cut(s) | 271 |
| MalI | GATC | 2 cut(s) | 149, 222 |
| MbiI | CCGCTC | 1 cut(s) | 82 |
| MboI | GATC | 2 cut(s) | 147, 220 |
| MboII | GAAGA | 6 cut(s) | 20, 230, 298, 329, 351, 463 |
| MfeI | CAATTG | 2 cut(s) | 197, 403 |
| MflI | RGATCY | 1 cut(s) | 220 |
| MluCI | AATT | 6 cut(s) | 175, 197, 208, 350, 355, 403 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MnlI | CCTC | 1 cut(s) | 313 |
| MroI | TCCGGA | 1 cut(s) | 336 |
| MseI | TTAA | 1 cut(s) | 354 |
| MspI | CCGG | 1 cut(s) | 337 |
| MunI | CAATTG | 2 cut(s) | 197, 403 |
| Mva1269I | GAATGC | 1 cut(s) | 450 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 377, 382 |
| NdeII | GATC | 2 cut(s) | 147, 220 |
| NlaIII | CATG | 3 cut(s) | 14, 311, 460 |
| NspI | RCATGY | 1 cut(s) | 460 |
| PctI | GAATGC | 1 cut(s) | 450 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| PsuI | RGATCY | 1 cut(s) | 220 |
| RsaI | GTAC | 2 cut(s) | 259, 409 |
| RsaNI | GTAC | 2 cut(s) | 258, 408 |
| SaqAI | TTAA | 1 cut(s) | 354 |
| Sau3AI | GATC | 2 cut(s) | 147, 220 |
| SchI | GAGTC | 1 cut(s) | 14 |
| SetI | ASST | 9 cut(s) | 28, 61, 65, 91, 169, 274, 344, 382, 417 |
| SmlI | CTYRAG | 2 cut(s) | 162, 224 |
| SmoI | CTYRAG | 2 cut(s) | 162, 224 |
| Sse9I | AATT | 6 cut(s) | 175, 197, 208, 350, 355, 403 |
| SsiI | CCGC | 2 cut(s) | 82, 385 |
| SspMI | CTAG | 2 cut(s) | 240, 416 |
| StyI | CCWWGG | 1 cut(s) | 312 |
| TaiI | ACGT | 1 cut(s) | 274 |
| TaqI | TCGA | 1 cut(s) | 362 |
| TasI | AATT | 6 cut(s) | 175, 197, 208, 350, 355, 403 |
| TatI | WGTACW | 2 cut(s) | 257, 407 |
| Tru1I | TTAA | 1 cut(s) | 354 |
| Tru9I | TTAA | 1 cut(s) | 354 |
| XapI | RAATTY | 2 cut(s) | 208, 350 |
| XceI | RCATGY | 1 cut(s) | 460 |
| XspI | CTAG | 2 cut(s) | 240, 416 |