ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MPC | PF03650 | 6 - 98 | 6.6e-39 | Mitochondrial pyruvate carriers |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 67 |
| AclWI | GGATC | 1 cut(s) | 10 |
| AcoI | YGGCCR | 2 cut(s) | 39, 243 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AdeI | CACNNNGTG | 1 cut(s) | 372 |
| AfaI | GTAC | 1 cut(s) | 193 |
| AfeI | AGCGCT | 1 cut(s) | 24 |
| AgsI | TTSAA | 1 cut(s) | 12 |
| AjnI | CCWGG | 1 cut(s) | 315 |
| AluBI | AGCT | 1 cut(s) | 98 |
| AluI | AGCT | 1 cut(s) | 98 |
| AlwI | GGATC | 1 cut(s) | 10 |
| Aor51HI | AGCGCT | 1 cut(s) | 24 |
| AoxI | GGCC | 4 cut(s) | 39, 43, 243, 253 |
| AspLEI | GCGC | 1 cut(s) | 25 |
| AspS9I | GGNCC | 1 cut(s) | 44 |
| AsuC2I | CCSGG | 2 cut(s) | 38, 247 |
| AsuHPI | GGTGA | 1 cut(s) | 305 |
| BaeGI | GKGCMC | 1 cut(s) | 70 |
| BanI | GGYRCC | 1 cut(s) | 67 |
| BbvCI | CCTCAGC | 1 cut(s) | 144 |
| BceAI | ACGGC | 1 cut(s) | 140 |
| BciT130I | CCWGG | 1 cut(s) | 317 |
| BcnI | CCSGG | 2 cut(s) | 38, 247 |
| BfmI | CTRYAG | 1 cut(s) | 187 |
| BfoI | RGCGCY | 1 cut(s) | 26 |
| BmcAI | AGTACT | 1 cut(s) | 193 |
| Bme1390I | CCNGG | 3 cut(s) | 38, 247, 317 |
| BmgT120I | GGNCC | 1 cut(s) | 44 |
| BmiI | GGNNCC | 2 cut(s) | 32, 69 |
| BmrFI | CCNGG | 3 cut(s) | 38, 247, 317 |
| BmrI | ACTGGG | 3 cut(s) | 292, 299, 339 |
| BmsI | GCATC | 1 cut(s) | 96 |
| BmuI | ACTGGG | 3 cut(s) | 292, 299, 339 |
| Bpu10I | CCTNAGC | 1 cut(s) | 144 |
| BpuMI | CCSGG | 2 cut(s) | 38, 247 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 1 cut(s) | 316 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 277, 307 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| Bse1I | ACTGG | 5 cut(s) | 172, 218, 298, 305, 334 |
| Bse3DI | GCAATG | 1 cut(s) | 246 |
| BseBI | CCWGG | 1 cut(s) | 317 |
| BseDI | CCNNGG | 1 cut(s) | 316 |
| BseMI | GCAATG | 1 cut(s) | 246 |
| BseMII | CTCAG | 1 cut(s) | 158 |
| BseNI | ACTGG | 5 cut(s) | 172, 218, 298, 305, 334 |
| BseSI | GKGCMC | 1 cut(s) | 70 |
| BseX3I | CGGCCG | 1 cut(s) | 39 |
| Bsh1285I | CGRYCG | 1 cut(s) | 42 |
| BshFI | GGCC | 4 cut(s) | 41, 45, 245, 255 |
| BshNI | GGYRCC | 1 cut(s) | 67 |
| BsiEI | CGRYCG | 1 cut(s) | 42 |
| BsiSI | CCGG | 3 cut(s) | 38, 42, 246 |
| BslFI | GGGAC | 2 cut(s) | 262, 286 |
| BsmFI | GGGAC | 2 cut(s) | 262, 286 |
| BsnI | GGCC | 4 cut(s) | 41, 45, 245, 255 |
| Bsp1286I | GDGCHC | 1 cut(s) | 70 |
| Bsp143I | GATC | 1 cut(s) | 15 |
| BspANI | GGCC | 4 cut(s) | 41, 45, 245, 255 |
| BspCNI | CTCAG | 1 cut(s) | 157 |
| BspLI | GGNNCC | 2 cut(s) | 32, 69 |
| BspPI | GGATC | 1 cut(s) | 10 |
| BspT107I | GGYRCC | 1 cut(s) | 67 |
| BsrDI | GCAATG | 1 cut(s) | 246 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrI | ACTGG | 5 cut(s) | 172, 218, 298, 305, 334 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| BssECI | CCNNGG | 1 cut(s) | 316 |
| BssMI | GATC | 1 cut(s) | 15 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| Bst2UI | CCWGG | 1 cut(s) | 317 |
| Bst4CI | ACNGT | 2 cut(s) | 196, 339 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 3 cut(s) | 43, 163, 355 |
| BstDEI | CTNAG | 2 cut(s) | 144, 207 |
| BstH2I | RGCGCY | 1 cut(s) | 26 |
| BstHHI | GCGC | 1 cut(s) | 25 |
| BstKTI | GATC | 1 cut(s) | 18 |
| BstMBI | GATC | 1 cut(s) | 15 |
| BstMCI | CGRYCG | 1 cut(s) | 42 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 104 |
| BstNI | CCWGG | 1 cut(s) | 317 |
| BstNSI | RCATGY | 1 cut(s) | 165 |
| BstSCI | CCNGG | 3 cut(s) | 36, 245, 315 |
| BstSFI | CTRYAG | 1 cut(s) | 187 |
| BstSLI | GKGCMC | 1 cut(s) | 70 |
| BstX2I | RGATCY | 1 cut(s) | 15 |
| BstYI | RGATCY | 1 cut(s) | 15 |
| BstZI | CGGCCG | 1 cut(s) | 39 |
| BsuRI | GGCC | 4 cut(s) | 41, 45, 245, 255 |
| BtsI | GCAGTG | 1 cut(s) | 366 |
| BtsIMutI | CAGTG | 2 cut(s) | 165, 366 |
| Cac8I | GCNNGC | 3 cut(s) | 43, 163, 355 |
| CfoI | GCGC | 1 cut(s) | 25 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| Cfr13I | GGNCC | 1 cut(s) | 44 |
| Csp6I | GTAC | 1 cut(s) | 192 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 8, 43 |
| CviAII | CATG | 1 cut(s) | 162 |
| CviJI | RGCY | 8 cut(s) | 41, 45, 98, 155, 245, 255, 322, 353 |
| CviKI_1 | RGCY | 8 cut(s) | 41, 45, 98, 155, 245, 255, 322, 353 |
| CviQI | GTAC | 1 cut(s) | 192 |
| DdeI | CTNAG | 2 cut(s) | 144, 207 |
| DpnI | GATC | 1 cut(s) | 17 |
| DpnII | GATC | 1 cut(s) | 15 |
| DraI | TTTAAA | 1 cut(s) | 79 |
| DraIII | CACNNNGTG | 1 cut(s) | 372 |
| EaeI | YGGCCR | 2 cut(s) | 39, 243 |
| EagI | CGGCCG | 1 cut(s) | 39 |
| EclXI | CGGCCG | 1 cut(s) | 39 |
| Eco147I | AGGCCT | 1 cut(s) | 255 |
| Eco47III | AGCGCT | 1 cut(s) | 24 |
| Eco52I | CGGCCG | 1 cut(s) | 39 |
| EcoRII | CCWGG | 1 cut(s) | 315 |
| FaeI | CATG | 1 cut(s) | 165 |
| FaiI | YATR | 5 cut(s) | 95, 139, 163, 189, 284 |
| FaqI | GGGAC | 2 cut(s) | 262, 286 |
| FatI | CATG | 1 cut(s) | 161 |
| FseI | GGCCGGCC | 1 cut(s) | 45 |
| GlaI | GCGC | 1 cut(s) | 24 |
| HaeII | RGCGCY | 1 cut(s) | 26 |
| HaeIII | GGCC | 4 cut(s) | 41, 45, 245, 255 |
| HapII | CCGG | 3 cut(s) | 38, 42, 246 |
| HhaI | GCGC | 1 cut(s) | 25 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 165 |
| Hin6I | GCGC | 1 cut(s) | 23 |
| HinP1I | GCGC | 1 cut(s) | 23 |
| HincII | GTYRAC | 1 cut(s) | 232 |
| HindII | GTYRAC | 1 cut(s) | 232 |
| HinfI | GANTC | 1 cut(s) | 217 |
| HpaII | CCGG | 3 cut(s) | 38, 42, 246 |
| HphI | GGTGA | 1 cut(s) | 305 |
| Hpy166II | GTNNAC | 1 cut(s) | 232 |
| Hpy8I | GTNNAC | 1 cut(s) | 232 |
| HpyCH4III | ACNGT | 2 cut(s) | 196, 339 |
| HpyCH4IV | ACGT | 1 cut(s) | 234 |
| HpyCH4V | TGCA | 3 cut(s) | 161, 165, 357 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 104 |
| HpyF3I | CTNAG | 2 cut(s) | 144, 207 |
| HpySE526I | ACGT | 1 cut(s) | 234 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 1 cut(s) | 165 |
| HspAI | GCGC | 1 cut(s) | 23 |
| KroI | GCCGGC | 1 cut(s) | 41 |
| KroNI | GCCGGC | 1 cut(s) | 43 |
| Kzo9I | GATC | 1 cut(s) | 15 |
| LweI | GCATC | 1 cut(s) | 96 |
| MaeII | ACGT | 1 cut(s) | 234 |
| MaeIII | GTNAC | 3 cut(s) | 180, 325, 333 |
| MalI | GATC | 1 cut(s) | 17 |
| MboI | GATC | 1 cut(s) | 15 |
| MboII | GAAGA | 1 cut(s) | 302 |
| MfeI | CAATTG | 1 cut(s) | 347 |
| MflI | RGATCY | 1 cut(s) | 15 |
| MhlI | GDGCHC | 1 cut(s) | 70 |
| MluCI | AATT | 2 cut(s) | 171, 347 |
| MnlI | CCTC | 1 cut(s) | 153 |
| MroNI | GCCGGC | 1 cut(s) | 41 |
| MseI | TTAA | 2 cut(s) | 78, 363 |
| MspI | CCGG | 3 cut(s) | 38, 42, 246 |
| MspR9I | CCNGG | 3 cut(s) | 38, 247, 317 |
| MunI | CAATTG | 1 cut(s) | 347 |
| MvaI | CCWGG | 1 cut(s) | 317 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 104 |
| NaeI | GCCGGC | 1 cut(s) | 43 |
| NciI | CCSGG | 2 cut(s) | 38, 247 |
| NdeII | GATC | 1 cut(s) | 15 |
| NgoMIV | GCCGGC | 1 cut(s) | 41 |
| NlaIII | CATG | 1 cut(s) | 165 |
| NlaIV | GGNNCC | 2 cut(s) | 32, 69 |
| NmuCI | GTSAC | 1 cut(s) | 180 |
| NspI | RCATGY | 1 cut(s) | 165 |
| PaeI | GCATGC | 1 cut(s) | 165 |
| PceI | AGGCCT | 1 cut(s) | 255 |
| PdiI | GCCGGC | 1 cut(s) | 43 |
| PfeI | GAWTC | 1 cut(s) | 217 |
| Psp6I | CCWGG | 1 cut(s) | 315 |
| PspGI | CCWGG | 1 cut(s) | 315 |
| PspN4I | GGNNCC | 2 cut(s) | 32, 69 |
| PspPI | GGNCC | 1 cut(s) | 44 |
| PsuI | RGATCY | 1 cut(s) | 15 |
| RigI | GGCCGGCC | 1 cut(s) | 45 |
| RsaI | GTAC | 1 cut(s) | 193 |
| RsaNI | GTAC | 1 cut(s) | 192 |
| SaqAI | TTAA | 2 cut(s) | 78, 363 |
| Sau3AI | GATC | 1 cut(s) | 15 |
| Sau96I | GGNCC | 1 cut(s) | 44 |
| ScaI | AGTACT | 1 cut(s) | 193 |
| ScrFI | CCNGG | 3 cut(s) | 38, 247, 317 |
| SduI | GDGCHC | 1 cut(s) | 70 |
| SetI | ASST | 3 cut(s) | 100, 127, 237 |
| SfaNI | GCATC | 1 cut(s) | 96 |
| SfcI | CTRYAG | 1 cut(s) | 187 |
| SphI | GCATGC | 1 cut(s) | 165 |
| Sse9I | AATT | 2 cut(s) | 171, 347 |
| SseBI | AGGCCT | 1 cut(s) | 255 |
| SspI | AATATT | 1 cut(s) | 103 |
| StuI | AGGCCT | 1 cut(s) | 255 |
| StyD4I | CCNGG | 3 cut(s) | 36, 245, 315 |
| TaaI | ACNGT | 2 cut(s) | 196, 339 |
| TaiI | ACGT | 1 cut(s) | 237 |
| TaqI | TCGA | 1 cut(s) | 341 |
| TasI | AATT | 2 cut(s) | 171, 347 |
| TatI | WGTACW | 1 cut(s) | 191 |
| TfiI | GAWTC | 1 cut(s) | 217 |
| Tru1I | TTAA | 2 cut(s) | 78, 363 |
| Tru9I | TTAA | 2 cut(s) | 78, 363 |
| TscAI | CASTG | 2 cut(s) | 172, 373 |
| TseFI | GTSAC | 1 cut(s) | 180 |
| Tsp45I | GTSAC | 1 cut(s) | 180 |
| TspDTI | ATGAA | 2 cut(s) | 47, 126 |
| TspGWI | ACGGA | 1 cut(s) | 286 |
| TspRI | CASTG | 2 cut(s) | 172, 373 |
| XceI | RCATGY | 1 cut(s) | 165 |
| ZrmI | AGTACT | 1 cut(s) | 193 |