Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 157 |
| AccII | CGCG | 1 cut(s) | 145 |
| AciI | CCGC | 2 cut(s) | 124, 145 |
| AclWI | GGATC | 1 cut(s) | 177 |
| AcuI | CTGAAG | 1 cut(s) | 219 |
| AluBI | AGCT | 5 cut(s) | 99, 121, 152, 214, 270 |
| AluI | AGCT | 5 cut(s) | 99, 121, 152, 214, 270 |
| AlwI | GGATC | 1 cut(s) | 177 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| BccI | CCATC | 3 cut(s) | 70, 77, 82 |
| BclI | TGATCA | 1 cut(s) | 55 |
| BfaI | CTAG | 2 cut(s) | 134, 161 |
| BmsI | GCATC | 2 cut(s) | 4, 239 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 188, 220 |
| BpmI | CTGGAG | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 2 cut(s) | 165, 244 |
| BsaWI | WCCGGW | 1 cut(s) | 184 |
| Bse1I | ACTGG | 2 cut(s) | 21, 34 |
| BseDI | CCNNGG | 2 cut(s) | 165, 244 |
| BseGI | GGATG | 3 cut(s) | 86, 93, 254 |
| BseMII | CTCAG | 1 cut(s) | 193 |
| BseNI | ACTGG | 2 cut(s) | 21, 34 |
| Bsh1236I | CGCG | 1 cut(s) | 145 |
| BsiSI | CCGG | 2 cut(s) | 127, 185 |
| Bsp143I | GATC | 2 cut(s) | 55, 169 |
| Bsp19I | CCATGG | 1 cut(s) | 165 |
| BspACI | CCGC | 2 cut(s) | 124, 145 |
| BspCNI | CTCAG | 1 cut(s) | 192 |
| BspFNI | CGCG | 1 cut(s) | 145 |
| BspPI | GGATC | 1 cut(s) | 177 |
| BsrI | ACTGG | 2 cut(s) | 21, 34 |
| BssECI | CCNNGG | 2 cut(s) | 165, 244 |
| BssMI | GATC | 2 cut(s) | 55, 169 |
| BssT1I | CCWWGG | 2 cut(s) | 165, 244 |
| BstDEI | CTNAG | 1 cut(s) | 179 |
| BstDSI | CCRYGG | 1 cut(s) | 165 |
| BstF5I | GGATG | 3 cut(s) | 86, 93, 254 |
| BstFNI | CGCG | 1 cut(s) | 145 |
| BstKTI | GATC | 2 cut(s) | 58, 172 |
| BstMBI | GATC | 2 cut(s) | 55, 169 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 118 |
| BstUI | CGCG | 1 cut(s) | 145 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 76 |
| BtgI | CCRYGG | 1 cut(s) | 165 |
| BtsCI | GGATG | 3 cut(s) | 86, 93, 254 |
| CseI | GACGC | 1 cut(s) | 151 |
| CviAII | CATG | 5 cut(s) | 59, 93, 166, 173, 221 |
| DdeI | CTNAG | 1 cut(s) | 179 |
| DpnI | GATC | 2 cut(s) | 57, 171 |
| DpnII | GATC | 2 cut(s) | 55, 169 |
| EciI | GGCGGA | 1 cut(s) | 113 |
| Eco130I | CCWWGG | 2 cut(s) | 165, 244 |
| Eco57I | CTGAAG | 1 cut(s) | 219 |
| EcoT14I | CCWWGG | 2 cut(s) | 165, 244 |
| ErhI | CCWWGG | 2 cut(s) | 165, 244 |
| FaeI | CATG | 5 cut(s) | 62, 96, 169, 176, 224 |
| FaiI | YATR | 7 cut(s) | 60, 94, 167, 174, 222, 231, 277 |
| FatI | CATG | 5 cut(s) | 58, 92, 165, 172, 220 |
| FauI | CCCGC | 1 cut(s) | 138 |
| FbaI | TGATCA | 1 cut(s) | 55 |
| FblI | GTMKAC | 1 cut(s) | 157 |
| FokI | GGATG | 3 cut(s) | 93, 100, 261 |
| FspBI | CTAG | 2 cut(s) | 134, 161 |
| GsuI | CTGGAG | 1 cut(s) | 101 |
| HapII | CCGG | 2 cut(s) | 127, 185 |
| HgaI | GACGC | 1 cut(s) | 151 |
| Hin1II | CATG | 5 cut(s) | 62, 96, 169, 176, 224 |
| HincII | GTYRAC | 1 cut(s) | 158 |
| HindII | GTYRAC | 1 cut(s) | 158 |
| HinfI | GANTC | 2 cut(s) | 177, 203 |
| HpaII | CCGG | 2 cut(s) | 127, 185 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 158 |
| Hpy188I | TCNGA | 2 cut(s) | 141, 238 |
| Hpy188III | TCNNGA | 1 cut(s) | 73 |
| Hpy8I | GTNNAC | 1 cut(s) | 158 |
| HpyCH4V | TGCA | 1 cut(s) | 220 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 118 |
| HpyF3I | CTNAG | 1 cut(s) | 179 |
| Hsp92II | CATG | 5 cut(s) | 62, 96, 169, 176, 224 |
| Ksp22I | TGATCA | 1 cut(s) | 55 |
| Kzo9I | GATC | 2 cut(s) | 55, 169 |
| LmnI | GCTCC | 3 cut(s) | 96, 126, 211 |
| LpnPI | CCDG | 7 cut(s) | 15, 34, 85, 91, 131, 140, 198 |
| LweI | GCATC | 2 cut(s) | 4, 239 |
| MaeI | CTAG | 2 cut(s) | 134, 161 |
| MalI | GATC | 2 cut(s) | 57, 171 |
| MboI | GATC | 2 cut(s) | 55, 169 |
| MlyI | GAGTC | 2 cut(s) | 171, 197 |
| MmeI | TCCRAC | 2 cut(s) | 65, 189 |
| MnlI | CCTC | 2 cut(s) | 123, 190 |
| MslI | CAYNNNNRTG | 1 cut(s) | 74 |
| MspI | CCGG | 2 cut(s) | 127, 185 |
| MvnI | CGCG | 1 cut(s) | 145 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 118 |
| NcoI | CCATGG | 1 cut(s) | 165 |
| NdeII | GATC | 2 cut(s) | 55, 169 |
| NlaIII | CATG | 5 cut(s) | 62, 96, 169, 176, 224 |
| PflFI | GACNNNGTC | 1 cut(s) | 180 |
| PleI | GAGTC | 2 cut(s) | 171, 197 |
| PpsI | GAGTC | 2 cut(s) | 171, 197 |
| PsyI | GACNNNGTC | 1 cut(s) | 180 |
| RseI | CAYNNNNRTG | 1 cut(s) | 74 |
| SalI | GTCGAC | 1 cut(s) | 156 |
| Sau3AI | GATC | 2 cut(s) | 55, 169 |
| SchI | GAGTC | 2 cut(s) | 171, 197 |
| SetI | ASST | 7 cut(s) | 55, 101, 110, 123, 154, 216, 272 |
| SfaNI | GCATC | 2 cut(s) | 4, 239 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 74 |
| SsiI | CCGC | 2 cut(s) | 124, 145 |
| SspMI | CTAG | 2 cut(s) | 134, 161 |
| StyI | CCWWGG | 2 cut(s) | 165, 244 |
| TaqI | TCGA | 2 cut(s) | 157, 190 |
| TspDTI | ATGAA | 1 cut(s) | 218 |
| Tth111I | GACNNNGTC | 1 cut(s) | 180 |
| XmiI | GTMKAC | 1 cut(s) | 157 |
| XspI | CTAG | 2 cut(s) | 134, 161 |