ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 382 |
| Acc36I | ACCTGC | 1 cut(s) | 14 |
| AccII | CGCG | 1 cut(s) | 197 |
| AciI | CCGC | 1 cut(s) | 283 |
| AclWI | GGATC | 1 cut(s) | 235 |
| AcoI | YGGCCR | 1 cut(s) | 297 |
| AcsI | RAATTY | 1 cut(s) | 85 |
| AcuI | CTGAAG | 1 cut(s) | 270 |
| AfaI | GTAC | 2 cut(s) | 93, 323 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 289, 306 |
| AflII | CTTAAG | 1 cut(s) | 304 |
| AgsI | TTSAA | 3 cut(s) | 44, 65, 239 |
| AluBI | AGCT | 1 cut(s) | 254 |
| AluI | AGCT | 1 cut(s) | 254 |
| Alw26I | GTCTC | 2 cut(s) | 18, 211 |
| AlwI | GGATC | 1 cut(s) | 235 |
| AoxI | GGCC | 2 cut(s) | 274, 297 |
| ApeKI | GCWGC | 1 cut(s) | 254 |
| ApoI | RAATTY | 1 cut(s) | 85 |
| AspLEI | GCGC | 1 cut(s) | 197 |
| AsuHPI | GGTGA | 1 cut(s) | 125 |
| BalI | TGGCCA | 1 cut(s) | 299 |
| BbsI | GAAGAC | 1 cut(s) | 123 |
| BbvI | GCAGC | 1 cut(s) | 241 |
| BcoDI | GTCTC | 2 cut(s) | 18, 211 |
| BfrI | CTTAAG | 1 cut(s) | 304 |
| BfuAI | ACCTGC | 1 cut(s) | 14 |
| BisI | GCNGC | 1 cut(s) | 255 |
| BlsI | GCNGC | 1 cut(s) | 256 |
| BmiI | GGNNCC | 1 cut(s) | 311 |
| BmsI | GCATC | 1 cut(s) | 337 |
| BpiI | GAAGAC | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 1 cut(s) | 313 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 289, 306 |
| Bse1I | ACTGG | 1 cut(s) | 300 |
| BseDI | CCNNGG | 1 cut(s) | 313 |
| BseGI | GGATG | 2 cut(s) | 56, 361 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 289, 306 |
| BseMII | CTCAG | 1 cut(s) | 31 |
| BseNI | ACTGG | 1 cut(s) | 300 |
| BseXI | GCAGC | 1 cut(s) | 241 |
| Bsh1236I | CGCG | 1 cut(s) | 197 |
| BshFI | GGCC | 2 cut(s) | 276, 299 |
| BslFI | GGGAC | 1 cut(s) | 306 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 289, 306 |
| BsmAI | GTCTC | 2 cut(s) | 18, 211 |
| BsmFI | GGGAC | 1 cut(s) | 306 |
| BsmI | GAATGC | 1 cut(s) | 39 |
| BsnI | GGCC | 2 cut(s) | 276, 299 |
| Bsp143I | GATC | 1 cut(s) | 227 |
| Bsp19I | CCATGG | 1 cut(s) | 313 |
| BspACI | CCGC | 1 cut(s) | 283 |
| BspANI | GGCC | 2 cut(s) | 276, 299 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspFNI | CGCG | 1 cut(s) | 197 |
| BspLI | GGNNCC | 1 cut(s) | 311 |
| BspMI | ACCTGC | 1 cut(s) | 14 |
| BspPI | GGATC | 1 cut(s) | 235 |
| BspTI | CTTAAG | 1 cut(s) | 304 |
| BsrI | ACTGG | 1 cut(s) | 300 |
| BssECI | CCNNGG | 1 cut(s) | 313 |
| BssMI | GATC | 1 cut(s) | 227 |
| BssT1I | CCWWGG | 1 cut(s) | 313 |
| Bst4CI | ACNGT | 1 cut(s) | 372 |
| BstAFI | CTTAAG | 1 cut(s) | 304 |
| BstDEI | CTNAG | 3 cut(s) | 9, 17, 167 |
| BstDSI | CCRYGG | 1 cut(s) | 313 |
| BstF5I | GGATG | 2 cut(s) | 56, 361 |
| BstFNI | CGCG | 1 cut(s) | 197 |
| BstHHI | GCGC | 1 cut(s) | 197 |
| BstKTI | GATC | 1 cut(s) | 230 |
| BstMAI | GTCTC | 2 cut(s) | 18, 211 |
| BstMBI | GATC | 1 cut(s) | 227 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 203, 282 |
| BstNSI | RCATGY | 2 cut(s) | 98, 213 |
| BstUI | CGCG | 1 cut(s) | 197 |
| BstV1I | GCAGC | 1 cut(s) | 241 |
| BstV2I | GAAGAC | 1 cut(s) | 123 |
| BstX2I | RGATCY | 1 cut(s) | 227 |
| BstYI | RGATCY | 1 cut(s) | 227 |
| BsuRI | GGCC | 2 cut(s) | 276, 299 |
| BtgI | CCRYGG | 1 cut(s) | 313 |
| BtsCI | GGATG | 2 cut(s) | 56, 361 |
| BveI | ACCTGC | 1 cut(s) | 14 |
| CfoI | GCGC | 1 cut(s) | 197 |
| CseI | GACGC | 1 cut(s) | 186 |
| Csp6I | GTAC | 2 cut(s) | 92, 322 |
| CviAII | CATG | 5 cut(s) | 95, 132, 210, 287, 314 |
| CviJI | RGCY | 6 cut(s) | 8, 159, 254, 276, 299, 318 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 159, 254, 276, 299, 318 |
| CviQI | GTAC | 2 cut(s) | 92, 322 |
| DdeI | CTNAG | 3 cut(s) | 9, 17, 167 |
| DpnI | GATC | 1 cut(s) | 229 |
| DpnII | GATC | 1 cut(s) | 227 |
| EaeI | YGGCCR | 1 cut(s) | 297 |
| Eco130I | CCWWGG | 1 cut(s) | 313 |
| Eco57I | CTGAAG | 1 cut(s) | 270 |
| EcoT14I | CCWWGG | 1 cut(s) | 313 |
| ErhI | CCWWGG | 1 cut(s) | 313 |
| FaeI | CATG | 5 cut(s) | 98, 135, 213, 290, 317 |
| FaqI | GGGAC | 1 cut(s) | 306 |
| FatI | CATG | 5 cut(s) | 94, 131, 209, 286, 313 |
| Fnu4HI | GCNGC | 1 cut(s) | 255 |
| FokI | GGATG | 2 cut(s) | 63, 368 |
| Fsp4HI | GCNGC | 1 cut(s) | 255 |
| GlaI | GCGC | 1 cut(s) | 196 |
| GluI | GCNGC | 1 cut(s) | 255 |
| HaeIII | GGCC | 2 cut(s) | 276, 299 |
| HgaI | GACGC | 1 cut(s) | 186 |
| HhaI | GCGC | 1 cut(s) | 197 |
| Hin1II | CATG | 5 cut(s) | 98, 135, 213, 290, 317 |
| Hin6I | GCGC | 1 cut(s) | 195 |
| HinP1I | GCGC | 1 cut(s) | 195 |
| HinfI | GANTC | 1 cut(s) | 11 |
| HphI | GGTGA | 1 cut(s) | 125 |
| Hpy166II | GTNNAC | 1 cut(s) | 201 |
| Hpy188I | TCNGA | 1 cut(s) | 20 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 231 |
| Hpy8I | GTNNAC | 1 cut(s) | 201 |
| Hpy99I | CGWCG | 1 cut(s) | 227 |
| HpyAV | CCTTC | 2 cut(s) | 266, 331 |
| HpyCH4III | ACNGT | 1 cut(s) | 372 |
| HpyCH4V | TGCA | 5 cut(s) | 39, 98, 153, 257, 350 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 203, 282 |
| HpyF3I | CTNAG | 3 cut(s) | 9, 17, 167 |
| Hsp92II | CATG | 5 cut(s) | 98, 135, 213, 290, 317 |
| HspAI | GCGC | 1 cut(s) | 195 |
| Kzo9I | GATC | 1 cut(s) | 227 |
| LpnPI | CCDG | 3 cut(s) | 9, 216, 281 |
| Lsp1109I | GCAGC | 1 cut(s) | 241 |
| LweI | GCATC | 1 cut(s) | 337 |
| MalI | GATC | 1 cut(s) | 229 |
| MboI | GATC | 1 cut(s) | 227 |
| MboII | GAAGA | 2 cut(s) | 128, 371 |
| MflI | RGATCY | 1 cut(s) | 227 |
| MlsI | TGGCCA | 1 cut(s) | 299 |
| MluCI | AATT | 2 cut(s) | 85, 138 |
| MluNI | TGGCCA | 1 cut(s) | 299 |
| MlyI | GAGTC | 1 cut(s) | 20 |
| MnlI | CCTC | 5 cut(s) | 131, 139, 172, 283, 346 |
| Mox20I | TGGCCA | 1 cut(s) | 299 |
| MscI | TGGCCA | 1 cut(s) | 299 |
| MseI | TTAA | 1 cut(s) | 305 |
| Msp20I | TGGCCA | 1 cut(s) | 299 |
| MspCI | CTTAAG | 1 cut(s) | 304 |
| Mva1269I | GAATGC | 1 cut(s) | 39 |
| MvnI | CGCG | 1 cut(s) | 197 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 203, 282 |
| NcoI | CCATGG | 1 cut(s) | 313 |
| NdeII | GATC | 1 cut(s) | 227 |
| NlaIII | CATG | 5 cut(s) | 98, 135, 213, 290, 317 |
| NlaIV | GGNNCC | 1 cut(s) | 311 |
| NspI | RCATGY | 2 cut(s) | 98, 213 |
| PctI | GAATGC | 1 cut(s) | 39 |
| PkrI | GCNGC | 1 cut(s) | 256 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| PsiI | TTATAA | 1 cut(s) | 382 |
| PspN4I | GGNNCC | 1 cut(s) | 311 |
| PsuI | RGATCY | 1 cut(s) | 227 |
| RsaI | GTAC | 2 cut(s) | 93, 323 |
| RsaNI | GTAC | 2 cut(s) | 92, 322 |
| SaqAI | TTAA | 1 cut(s) | 305 |
| SatI | GCNGC | 1 cut(s) | 255 |
| Sau3AI | GATC | 1 cut(s) | 227 |
| SchI | GAGTC | 1 cut(s) | 20 |
| SetI | ASST | 4 cut(s) | 28, 123, 256, 342 |
| SfaNI | GCATC | 1 cut(s) | 337 |
| SmlI | CTYRAG | 1 cut(s) | 304 |
| SmoI | CTYRAG | 1 cut(s) | 304 |
| Sse9I | AATT | 2 cut(s) | 85, 138 |
| SsiI | CCGC | 1 cut(s) | 283 |
| StyI | CCWWGG | 1 cut(s) | 313 |
| TaaI | ACNGT | 1 cut(s) | 372 |
| TasI | AATT | 2 cut(s) | 85, 138 |
| Tru1I | TTAA | 1 cut(s) | 305 |
| Tru9I | TTAA | 1 cut(s) | 305 |
| TseI | GCWGC | 1 cut(s) | 254 |
| TspDTI | ATGAA | 2 cut(s) | 98, 372 |
| TspGWI | ACGGA | 1 cut(s) | 240 |
| Vha464I | CTTAAG | 1 cut(s) | 304 |
| XapI | RAATTY | 1 cut(s) | 85 |
| XceI | RCATGY | 2 cut(s) | 98, 213 |