Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 17 |
| AciI | CCGC | 1 cut(s) | 366 |
| AclWI | GGATC | 1 cut(s) | 368 |
| AcoI | YGGCCR | 1 cut(s) | 429 |
| AcsI | RAATTY | 1 cut(s) | 66 |
| AcuI | CTGAAG | 1 cut(s) | 215 |
| AfaI | GTAC | 1 cut(s) | 55 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 174 |
| AgsI | TTSAA | 2 cut(s) | 22, 284 |
| AjnI | CCWGG | 3 cut(s) | 88, 167, 173 |
| AluBI | AGCT | 3 cut(s) | 8, 314, 410 |
| AluI | AGCT | 3 cut(s) | 8, 314, 410 |
| Alw26I | GTCTC | 1 cut(s) | 148 |
| AlwI | GGATC | 1 cut(s) | 368 |
| AoxI | GGCC | 1 cut(s) | 429 |
| ApeKI | GCWGC | 1 cut(s) | 323 |
| ApoI | RAATTY | 1 cut(s) | 66 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 116, 148 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 293 |
| AspS9I | GGNCC | 1 cut(s) | 171 |
| AsuC2I | CCSGG | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 171 |
| BaeGI | GKGCMC | 1 cut(s) | 400 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 45, 78 |
| BalI | TGGCCA | 1 cut(s) | 431 |
| BbvI | GCAGC | 1 cut(s) | 310 |
| BccI | CCATC | 1 cut(s) | 440 |
| BciT130I | CCWGG | 3 cut(s) | 90, 169, 175 |
| BciVI | GTATCC | 1 cut(s) | 325 |
| BcnI | CCSGG | 1 cut(s) | 98 |
| BcoDI | GTCTC | 1 cut(s) | 148 |
| BfaI | CTAG | 2 cut(s) | 327, 442 |
| BfuAI | ACCTGC | 1 cut(s) | 17 |
| BfuI | GTATCC | 1 cut(s) | 325 |
| BisI | GCNGC | 1 cut(s) | 324 |
| BlsI | GCNGC | 1 cut(s) | 325 |
| Bme1390I | CCNGG | 4 cut(s) | 90, 98, 169, 175 |
| Bme18I | GGWCC | 1 cut(s) | 171 |
| BmgT120I | GGNCC | 1 cut(s) | 171 |
| BmrFI | CCNGG | 4 cut(s) | 90, 98, 169, 175 |
| BmsI | GCATC | 1 cut(s) | 151 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 128, 160 |
| BpmI | CTGGAG | 1 cut(s) | 390 |
| BpuEI | CTTGAG | 1 cut(s) | 243 |
| BpuMI | CCSGG | 1 cut(s) | 98 |
| Bsa29I | ATCGAT | 1 cut(s) | 156 |
| BsaI | GGTCTC | 1 cut(s) | 148 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 174 |
| Bse3DI | GCAATG | 1 cut(s) | 41 |
| BseBI | CCWGG | 3 cut(s) | 90, 169, 175 |
| BseCI | ATCGAT | 1 cut(s) | 156 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 174 |
| BseMI | GCAATG | 1 cut(s) | 41 |
| BseMII | CTCAG | 2 cut(s) | 159, 256 |
| BseSI | GKGCMC | 1 cut(s) | 400 |
| BseXI | GCAGC | 1 cut(s) | 310 |
| BshFI | GGCC | 1 cut(s) | 431 |
| BshVI | ATCGAT | 1 cut(s) | 156 |
| BsiSI | CCGG | 1 cut(s) | 98 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 174 |
| BsmAI | GTCTC | 1 cut(s) | 148 |
| BsnI | GGCC | 1 cut(s) | 431 |
| Bso31I | GGTCTC | 1 cut(s) | 148 |
| Bsp1286I | GDGCHC | 1 cut(s) | 400 |
| Bsp143I | GATC | 2 cut(s) | 153, 373 |
| BspACI | CCGC | 1 cut(s) | 366 |
| BspANI | GGCC | 1 cut(s) | 431 |
| BspCNI | CTCAG | 2 cut(s) | 158, 255 |
| BspDI | ATCGAT | 1 cut(s) | 156 |
| BspMI | ACCTGC | 1 cut(s) | 17 |
| BspPI | GGATC | 1 cut(s) | 368 |
| BspTNI | GGTCTC | 1 cut(s) | 148 |
| BsrDI | GCAATG | 1 cut(s) | 41 |
| BssMI | GATC | 2 cut(s) | 153, 373 |
| Bst2UI | CCWGG | 3 cut(s) | 90, 169, 175 |
| BstC8I | GCNNGC | 2 cut(s) | 10, 199 |
| BstDEI | CTNAG | 2 cut(s) | 145, 242 |
| BstKTI | GATC | 2 cut(s) | 156, 376 |
| BstMAI | GTCTC | 1 cut(s) | 148 |
| BstMBI | GATC | 2 cut(s) | 153, 373 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 194, 311, 320 |
| BstNI | CCWGG | 3 cut(s) | 90, 169, 175 |
| BstNSI | RCATGY | 1 cut(s) | 188 |
| BstSCI | CCNGG | 4 cut(s) | 88, 96, 167, 173 |
| BstSLI | GKGCMC | 1 cut(s) | 400 |
| BstV1I | GCAGC | 1 cut(s) | 310 |
| BstX2I | RGATCY | 1 cut(s) | 373 |
| BstYI | RGATCY | 1 cut(s) | 373 |
| Bsu15I | ATCGAT | 1 cut(s) | 156 |
| BsuI | GTATCC | 1 cut(s) | 325 |
| BsuRI | GGCC | 1 cut(s) | 431 |
| BsuTUI | ATCGAT | 1 cut(s) | 156 |
| BveI | ACCTGC | 1 cut(s) | 17 |
| Cac8I | GCNNGC | 2 cut(s) | 10, 199 |
| Cfr13I | GGNCC | 1 cut(s) | 171 |
| ClaI | ATCGAT | 1 cut(s) | 156 |
| Csp6I | GTAC | 1 cut(s) | 54 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 408, 443 |
| CviAII | CATG | 2 cut(s) | 122, 185 |
| CviJI | RGCY | 6 cut(s) | 8, 101, 314, 410, 431, 441 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 101, 314, 410, 431, 441 |
| CviQI | GTAC | 1 cut(s) | 54 |
| DdeI | CTNAG | 2 cut(s) | 145, 242 |
| DpnI | GATC | 2 cut(s) | 155, 375 |
| DpnII | GATC | 2 cut(s) | 153, 373 |
| EaeI | YGGCCR | 1 cut(s) | 429 |
| Eco31I | GGTCTC | 1 cut(s) | 148 |
| Eco47I | GGWCC | 1 cut(s) | 171 |
| Eco57I | CTGAAG | 1 cut(s) | 215 |
| EcoRII | CCWGG | 3 cut(s) | 88, 167, 173 |
| FaeI | CATG | 2 cut(s) | 125, 188 |
| FaiI | YATR | 6 cut(s) | 123, 186, 195, 339, 391, 403 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 252, 284 |
| FatI | CATG | 2 cut(s) | 121, 184 |
| Fnu4HI | GCNGC | 1 cut(s) | 324 |
| Fsp4HI | GCNGC | 1 cut(s) | 324 |
| FspBI | CTAG | 2 cut(s) | 327, 442 |
| GluI | GCNGC | 1 cut(s) | 324 |
| GsuI | CTGGAG | 1 cut(s) | 390 |
| HaeIII | GGCC | 1 cut(s) | 431 |
| HapII | CCGG | 1 cut(s) | 98 |
| Hin1II | CATG | 2 cut(s) | 125, 188 |
| HinfI | GANTC | 2 cut(s) | 85, 235 |
| HpaII | CCGG | 1 cut(s) | 98 |
| Hpy188I | TCNGA | 3 cut(s) | 79, 148, 234 |
| Hpy188III | TCNNGA | 1 cut(s) | 260 |
| HpyCH4V | TGCA | 1 cut(s) | 34 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 194, 311, 320 |
| HpyF3I | CTNAG | 2 cut(s) | 145, 242 |
| Hsp92II | CATG | 2 cut(s) | 125, 188 |
| Kzo9I | GATC | 2 cut(s) | 153, 373 |
| Lsp1109I | GCAGC | 1 cut(s) | 310 |
| LweI | GCATC | 1 cut(s) | 151 |
| MaeI | CTAG | 2 cut(s) | 327, 442 |
| MalI | GATC | 2 cut(s) | 155, 375 |
| MboI | GATC | 2 cut(s) | 153, 373 |
| MboII | GAAGA | 2 cut(s) | 221, 261 |
| MflI | RGATCY | 1 cut(s) | 373 |
| MhlI | GDGCHC | 1 cut(s) | 400 |
| MlsI | TGGCCA | 1 cut(s) | 431 |
| MluCI | AATT | 2 cut(s) | 66, 129 |
| MluNI | TGGCCA | 1 cut(s) | 431 |
| MmeI | TCCRAC | 1 cut(s) | 43 |
| MnlI | CCTC | 4 cut(s) | 175, 251, 373, 387 |
| Mox20I | TGGCCA | 1 cut(s) | 431 |
| MroXI | GAANNNNTTC | 1 cut(s) | 293 |
| MscI | TGGCCA | 1 cut(s) | 431 |
| Msp20I | TGGCCA | 1 cut(s) | 431 |
| MspA1I | CMGCKG | 1 cut(s) | 368 |
| MspI | CCGG | 1 cut(s) | 98 |
| MspR9I | CCNGG | 4 cut(s) | 90, 98, 169, 175 |
| MvaI | CCWGG | 3 cut(s) | 90, 169, 175 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 194, 311, 320 |
| NciI | CCSGG | 1 cut(s) | 98 |
| NdeII | GATC | 2 cut(s) | 153, 373 |
| NlaIII | CATG | 2 cut(s) | 125, 188 |
| NspI | RCATGY | 1 cut(s) | 188 |
| PdmI | GAANNNNTTC | 1 cut(s) | 293 |
| PfeI | GAWTC | 2 cut(s) | 85, 235 |
| PfoI | TCCNGGA | 1 cut(s) | 167 |
| PkrI | GCNGC | 1 cut(s) | 325 |
| Psp6I | CCWGG | 3 cut(s) | 88, 167, 173 |
| PspGI | CCWGG | 3 cut(s) | 88, 167, 173 |
| PspPI | GGNCC | 1 cut(s) | 171 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 210, 242 |
| PsuI | RGATCY | 1 cut(s) | 373 |
| RsaI | GTAC | 1 cut(s) | 55 |
| RsaNI | GTAC | 1 cut(s) | 54 |
| SatI | GCNGC | 1 cut(s) | 324 |
| Sau3AI | GATC | 2 cut(s) | 153, 373 |
| Sau96I | GGNCC | 1 cut(s) | 171 |
| ScrFI | CCNGG | 4 cut(s) | 90, 98, 169, 175 |
| SduI | GDGCHC | 1 cut(s) | 400 |
| SfaNI | GCATC | 1 cut(s) | 151 |
| SinI | GGWCC | 1 cut(s) | 171 |
| SmlI | CTYRAG | 1 cut(s) | 258 |
| SmoI | CTYRAG | 1 cut(s) | 258 |
| Sse9I | AATT | 2 cut(s) | 66, 129 |
| SsiI | CCGC | 1 cut(s) | 366 |
| SspI | AATATT | 1 cut(s) | 352 |
| SspMI | CTAG | 2 cut(s) | 327, 442 |
| StyD4I | CCNGG | 4 cut(s) | 88, 96, 167, 173 |
| TaqI | TCGA | 1 cut(s) | 156 |
| TasI | AATT | 2 cut(s) | 66, 129 |
| TfiI | GAWTC | 2 cut(s) | 85, 235 |
| TseI | GCWGC | 1 cut(s) | 323 |
| VpaK11BI | GGWCC | 1 cut(s) | 171 |
| XapI | RAATTY | 1 cut(s) | 66 |
| XceI | RCATGY | 1 cut(s) | 188 |
| XmnI | GAANNNNTTC | 1 cut(s) | 293 |
| XspI | CTAG | 2 cut(s) | 327, 442 |