Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 364 |
| AcyI | GRCGYC | 1 cut(s) | 255 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AgsI | TTSAA | 1 cut(s) | 275 |
| AhlI | ACTAGT | 1 cut(s) | 88 |
| AluBI | AGCT | 4 cut(s) | 48, 218, 293, 378 |
| AluI | AGCT | 4 cut(s) | 48, 218, 293, 378 |
| ApeKI | GCWGC | 2 cut(s) | 77, 161 |
| AsuC2I | CCSGG | 1 cut(s) | 82 |
| AsuHPI | GGTGA | 1 cut(s) | 118 |
| BbvI | GCAGC | 2 cut(s) | 89, 148 |
| BccI | CCATC | 1 cut(s) | 342 |
| BcnI | CCSGG | 1 cut(s) | 82 |
| BcuI | ACTAGT | 1 cut(s) | 88 |
| BfaI | CTAG | 2 cut(s) | 62, 89 |
| BfmI | CTRYAG | 1 cut(s) | 294 |
| BisI | GCNGC | 2 cut(s) | 78, 162 |
| BlpI | GCTNAGC | 1 cut(s) | 44 |
| BlsI | GCNGC | 2 cut(s) | 79, 163 |
| Bme1390I | CCNGG | 1 cut(s) | 82 |
| BmrFI | CCNGG | 1 cut(s) | 82 |
| BmsI | GCATC | 1 cut(s) | 130 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 44 |
| BpuEI | CTTGAG | 1 cut(s) | 15 |
| BpuMI | CCSGG | 1 cut(s) | 82 |
| BsaHI | GRCGYC | 1 cut(s) | 255 |
| BsaJI | CCNNGG | 1 cut(s) | 249 |
| Bse3DI | GCAATG | 2 cut(s) | 156, 312 |
| BseDI | CCNNGG | 1 cut(s) | 249 |
| BseGI | GGATG | 1 cut(s) | 191 |
| BseMI | GCAATG | 2 cut(s) | 156, 312 |
| BseRI | GAGGAG | 1 cut(s) | 132 |
| BseXI | GCAGC | 2 cut(s) | 89, 148 |
| BseYI | CCCAGC | 1 cut(s) | 338 |
| BsiSI | CCGG | 1 cut(s) | 82 |
| Bsp1407I | TGTACA | 1 cut(s) | 178 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 44 |
| Bsp19I | CCATGG | 1 cut(s) | 249 |
| BsrDI | GCAATG | 2 cut(s) | 156, 312 |
| BsrGI | TGTACA | 1 cut(s) | 178 |
| BssECI | CCNNGG | 1 cut(s) | 249 |
| BssNI | GRCGYC | 1 cut(s) | 255 |
| BssT1I | CCWWGG | 1 cut(s) | 249 |
| Bst6I | CTCTTC | 2 cut(s) | 60, 294 |
| BstACI | GRCGYC | 1 cut(s) | 255 |
| BstAUI | TGTACA | 1 cut(s) | 178 |
| BstDEI | CTNAG | 4 cut(s) | 44, 134, 198, 286 |
| BstDSI | CCRYGG | 1 cut(s) | 249 |
| BstF5I | GGATG | 1 cut(s) | 191 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstSCI | CCNGG | 1 cut(s) | 80 |
| BstSFI | CTRYAG | 1 cut(s) | 294 |
| BstV1I | GCAGC | 2 cut(s) | 89, 148 |
| BtgI | CCRYGG | 1 cut(s) | 249 |
| BtsCI | GGATG | 1 cut(s) | 191 |
| CseI | GACGC | 1 cut(s) | 244 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CviAII | CATG | 5 cut(s) | 74, 203, 250, 335, 385 |
| CviJI | RGCY | 8 cut(s) | 48, 56, 61, 80, 218, 293, 352, 378 |
| CviKI_1 | RGCY | 8 cut(s) | 48, 56, 61, 80, 218, 293, 352, 378 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DdeI | CTNAG | 4 cut(s) | 44, 134, 198, 286 |
| DraI | TTTAAA | 1 cut(s) | 222 |
| Eam1104I | CTCTTC | 2 cut(s) | 60, 294 |
| EarI | CTCTTC | 2 cut(s) | 60, 294 |
| Eco130I | CCWWGG | 1 cut(s) | 249 |
| Eco32I | GATATC | 1 cut(s) | 37 |
| Eco57I | CTGAAG | 1 cut(s) | 364 |
| EcoRV | GATATC | 1 cut(s) | 37 |
| EcoT14I | CCWWGG | 1 cut(s) | 249 |
| ErhI | CCWWGG | 1 cut(s) | 249 |
| FaeI | CATG | 5 cut(s) | 77, 206, 253, 338, 388 |
| FaiI | YATR | 9 cut(s) | 75, 186, 204, 251, 296, 321, 336, 355, 386 |
| FatI | CATG | 5 cut(s) | 73, 202, 249, 334, 384 |
| Fnu4HI | GCNGC | 2 cut(s) | 78, 162 |
| FokI | GGATG | 1 cut(s) | 178 |
| Fsp4HI | GCNGC | 2 cut(s) | 78, 162 |
| FspBI | CTAG | 2 cut(s) | 62, 89 |
| GluI | GCNGC | 2 cut(s) | 78, 162 |
| GsaI | CCCAGC | 1 cut(s) | 342 |
| HapII | CCGG | 1 cut(s) | 82 |
| HgaI | GACGC | 1 cut(s) | 244 |
| Hin1I | GRCGYC | 1 cut(s) | 255 |
| Hin1II | CATG | 5 cut(s) | 77, 206, 253, 338, 388 |
| HindIII | AAGCTT | 2 cut(s) | 216, 376 |
| HpaII | CCGG | 1 cut(s) | 82 |
| HphI | GGTGA | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 1 cut(s) | 32 |
| HpyAV | CCTTC | 1 cut(s) | 221 |
| HpyCH4V | TGCA | 4 cut(s) | 77, 143, 170, 357 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpyF3I | CTNAG | 4 cut(s) | 44, 134, 198, 286 |
| Hsp92I | GRCGYC | 1 cut(s) | 255 |
| Hsp92II | CATG | 5 cut(s) | 77, 206, 253, 338, 388 |
| LpnPI | CCDG | 3 cut(s) | 95, 189, 324 |
| Lsp1109I | GCAGC | 2 cut(s) | 89, 148 |
| LweI | GCATC | 1 cut(s) | 130 |
| MaeI | CTAG | 2 cut(s) | 62, 89 |
| MaeIII | GTNAC | 2 cut(s) | 106, 265 |
| MboII | GAAGA | 2 cut(s) | 77, 311 |
| MfeI | CAATTG | 1 cut(s) | 270 |
| MluCI | AATT | 3 cut(s) | 209, 270, 316 |
| MnlI | CCTC | 7 cut(s) | 28, 110, 199, 205, 295, 361, 381 |
| MseI | TTAA | 3 cut(s) | 221, 344, 374 |
| MspI | CCGG | 1 cut(s) | 82 |
| MspR9I | CCNGG | 1 cut(s) | 82 |
| MunI | CAATTG | 1 cut(s) | 270 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NciI | CCSGG | 1 cut(s) | 82 |
| NcoI | CCATGG | 1 cut(s) | 249 |
| NlaIII | CATG | 5 cut(s) | 77, 206, 253, 338, 388 |
| NmuCI | GTSAC | 2 cut(s) | 106, 265 |
| PkrI | GCNGC | 2 cut(s) | 79, 163 |
| PspFI | CCCAGC | 1 cut(s) | 338 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| SaqAI | TTAA | 3 cut(s) | 221, 344, 374 |
| SatI | GCNGC | 2 cut(s) | 78, 162 |
| ScrFI | CCNGG | 1 cut(s) | 82 |
| SetI | ASST | 8 cut(s) | 20, 50, 108, 220, 232, 295, 380, 392 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| SfcI | CTRYAG | 1 cut(s) | 294 |
| SmlI | CTYRAG | 1 cut(s) | 30 |
| SmoI | CTYRAG | 1 cut(s) | 30 |
| SpeI | ACTAGT | 1 cut(s) | 88 |
| Sse9I | AATT | 3 cut(s) | 209, 270, 316 |
| SspMI | CTAG | 2 cut(s) | 62, 89 |
| StyD4I | CCNGG | 1 cut(s) | 80 |
| StyI | CCWWGG | 1 cut(s) | 249 |
| TasI | AATT | 3 cut(s) | 209, 270, 316 |
| TatI | WGTACW | 1 cut(s) | 178 |
| Tru1I | TTAA | 3 cut(s) | 221, 344, 374 |
| Tru9I | TTAA | 3 cut(s) | 221, 344, 374 |
| TseFI | GTSAC | 2 cut(s) | 106, 265 |
| TseI | GCWGC | 2 cut(s) | 77, 161 |
| Tsp45I | GTSAC | 2 cut(s) | 106, 265 |
| TspDTI | ATGAA | 3 cut(s) | 145, 180, 323 |
| XspI | CTAG | 2 cut(s) | 62, 89 |